Citrus Sinensis ID: 009972
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 521 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGH8 | 664 | Probable LRR receptor-lik | yes | no | 0.963 | 0.756 | 0.690 | 0.0 | |
| C0LGQ4 | 678 | Probable LRR receptor-lik | no | no | 0.892 | 0.685 | 0.325 | 8e-67 | |
| C0LGU7 | 695 | Probable LRR receptor-lik | no | no | 0.892 | 0.669 | 0.305 | 2e-54 | |
| C0LGU5 | 614 | Probable LRR receptor-lik | no | no | 0.783 | 0.664 | 0.312 | 3e-43 | |
| Q9LYN6 | 499 | Probable inactive recepto | no | no | 0.414 | 0.432 | 0.417 | 5e-41 | |
| Q9SIZ4 | 489 | Inactive receptor-like se | no | no | 0.403 | 0.429 | 0.400 | 3e-40 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.735 | 0.347 | 0.295 | 1e-39 | |
| Q9C9N5 | 685 | Probable inactive leucine | no | no | 0.928 | 0.706 | 0.284 | 4e-39 | |
| C0LGF4 | 591 | LRR receptor-like serine/ | no | no | 0.779 | 0.686 | 0.293 | 1e-38 | |
| Q9FIZ3 | 1252 | LRR receptor-like serine/ | no | no | 0.817 | 0.340 | 0.281 | 2e-37 |
| >sp|C0LGH8|Y1634_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/510 (69%), Positives = 412/510 (80%), Gaps = 8/510 (1%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS L VL G+ F +C+ FA+NE AL FKEAIYEDP LV+SNWN ++DPC W
Sbjct: 1 MRSKYFCSLALVL-GLFFVSCDGFASNEVQALRRFKEAIYEDPLLVMSNWNDPNSDPCDW 59
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
TGI CS ++D V+KINIS SS+KGFLAPELG +TYLQELILHGN LIG IPKE+G LK L
Sbjct: 60 TGIYCSPSKDHVIKINISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKNL 119
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
KILDLG N L GPIP EIG+L+G++ INLQSNGLTG+LPAELGNL L ELH+DRNRLQG
Sbjct: 120 KILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKLPAELGNLKYLRELHIDRNRLQG 179
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
++ SGY + ++ SSAN+ GLC LKVADFSYNFFVG+IPKCLE LP TSFQ
Sbjct: 180 SLLVAGASGYQSKVYSS-NSSANIAGLC--KSLKVADFSYNFFVGNIPKCLENLPRTSFQ 236
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLS--PKHQAAEDVSKHQSASRPAWLLTLEIVT 298
GNC+QNKD K R+++ C A +T S PKHQ+A+ V+KH AS+P WLL LEIVT
Sbjct: 237 GNCMQNKDLKHRSSSQCANAQLVKTHGSPSAAPKHQSAQMVAKHHRASKPKWLLALEIVT 296
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
G+MVG+L LVA F+ + R ++ ++IIPWKKS+SEK+ +Y+DSE+LKDV R +RQELE
Sbjct: 297 GSMVGLLLLVALFSAVHRWNNRSTLIIPWKKSSSEKEKFTVYVDSEMLKDVSRLTRQELE 356
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIG S DS +YKGT+KGG EIAVISLC+KEE WTGYLELYFQREVADLAR+N
Sbjct: 357 VACEDFSNIIGLSADSQIYKGTLKGGSEIAVISLCVKEEDWTGYLELYFQREVADLARLN 416
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HENT KLLGYC+E SPFTRMLVF+YASNGTLYEHLHYGE VSW RRMKIVIGIARGLK
Sbjct: 417 HENTAKLLGYCKEISPFTRMLVFEYASNGTLYEHLHYGEAALVSWARRMKIVIGIARGLK 476
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKV 506
YLH EL PPFTISEL+S+A+YLTEDF+PK+
Sbjct: 477 YLHMELDPPFTISELSSNAIYLTEDFTPKL 506
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|C0LGQ4|MRH1_ARATH Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (650), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 265/526 (50%), Gaps = 61/526 (11%)
Query: 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDA-DPCHWTGIACSDARDRVLKINISGSSLKG 84
T++ AL F+ + DPH L+NWN D C+W+G+ C D + ++L ++SG SL+G
Sbjct: 27 TSQGSALLKFRARVNSDPHGTLANWNVSGINDLCYWSGVTCVDGKVQIL--DLSGYSLEG 84
Query: 85 FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
LAPEL L+ L+ LIL N+ G IPKE G + L++LDL N L+G IPPE+ N L
Sbjct: 85 TLAPELSQLSDLRSLILSRNHFSGGIPKEYGSFENLEVLDLRENDLSGQIPPELSNGLSL 144
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204
+ L N + + ++ L S E+ L ++ P S I+ +
Sbjct: 145 KHLLLSGNKFSDDMRIKIVRLQSSYEVRLKKS------PKLSPLAVLGCINRKLGHCVSR 198
Query: 205 TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTL-------- 256
+ + +++ F + + L+ PS + + + ++ + + L
Sbjct: 199 NRIIQVKKVEAIVFRIK---ATSRRFLKAFPSFLEETDIYKRRELLEETSNLAAEPAPSA 255
Query: 257 --------------CGGAPPARTRAG-----------LSPKHQAAEDVSKHQ-------S 284
G+ PA T A K + D+SK+Q
Sbjct: 256 PSPSPGIITEASPRSSGSFPAVTNAKKRRPPLVPPVPSPDKGSTSPDISKNQPQDNKQSK 315
Query: 285 ASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDSEIL 344
S+ WL + I + VG+L +VA ++ K I PWK S + + +
Sbjct: 316 GSKHVWLYVV-IAVASFVGLLIIVAVIFFCRKRAVKS--IGPWKTGLSGQ----LQKAFV 368
Query: 345 KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLEL 403
V + +R ELE ACEDFSNII + VYKGT+ G EIAV S I E + WT +E+
Sbjct: 369 TGVPKLNRSELETACEDFSNIIETFDGYTVYKGTLSSGVEIAVASTAIAESKEWTRAMEM 428
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTR 463
++R++ L+RINH+N L+GYC E PF RM+VF+YA NGTL+EHLH E + W+
Sbjct: 429 AYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDKETEHLDWSA 488
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509
RM+I++G A L+++H + PP ++ NSS +YLT+D++ KVS +
Sbjct: 489 RMRIIMGTAYCLQHMHG-MNPPMAHTDFNSSEIYLTDDYAAKVSEI 533
|
May be involved in the regulation of root hairs development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGU7|Y5458_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 243/537 (45%), Gaps = 72/537 (13%)
Query: 30 WALTTFKEAIYEDPHLVLSNWNALDADP-CHWTGIACSDARDRVLKINISGSSLKGFLAP 88
+ L F+ + DPH L+NWN D D C W G+ C D ++V +N+SG SL G LAP
Sbjct: 35 FVLLKFRARVDSDPHGTLANWNVSDHDHFCSWFGVTCVD--NKVQMLNLSGCSLGGTLAP 92
Query: 89 ELGLLTYLQELIL------------------------HGNNLIGIIPKELGLLKRLKILD 124
EL L+ L+ LIL NNL G++P EL + + L
Sbjct: 93 ELSQLSELRSLILSKNKLSGDIPNEFASFAKLEFLDLRDNNLNGVVPPELNKVLTPENLL 152
Query: 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE--------LGNLISLEELHLDRN 176
L N+ G + + L L K+ + N + A+ LG +S L + RN
Sbjct: 153 LSGNKFAGFMTVKFLRLQSLYKVQMNKNRELSSVSADVLDCVNRKLGYCVSRRSL-ITRN 211
Query: 177 RLQGAV-------------PAGSNSGYTANIH------GMYASSANLTGLCHLSQLKVAD 217
+ + V Y N H ++ L +L+ + D
Sbjct: 212 KAKAFVLRIRATSRHYMVRRESHGKNYVVNYHPSENETSIFKRRELLEETSNLAAMPAPD 271
Query: 218 FSYNFFVGSIPKCLEYL-PSTSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAA 276
P+ + + P +S L N K+R L + P +
Sbjct: 272 TP-----SPSPEIITIVFPRSSGSFPALTNA--KKRIPPLIPPSSPPPLPTNNTIASDPP 324
Query: 277 EDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH 336
+ + WL + I V +L +VA ++ K I PWK S +
Sbjct: 325 RKFEEKSKGFKDVWLYVV-IGVAAFVAMLIIVAVIFFFRKRAVKS--IGPWKTGLSGQ-- 379
Query: 337 IYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-E 395
+ + V + +R ELE ACEDFSNII + VYKGT+ G EIAV S I E
Sbjct: 380 --LQKAFVTGVPKLNRSELETACEDFSNIIEAFDGYTVYKGTLSSGVEIAVASTAILETR 437
Query: 396 HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE 455
WT +E+ ++R + ++R+NH+N L+GYC E PF RM+VF+YA NGTL+EHLH E
Sbjct: 438 EWTRAMEMTYRRRIDTMSRVNHKNFINLIGYCEEDEPFNRMMVFEYAPNGTLFEHLHDKE 497
Query: 456 RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+ W R +I++G A L+Y+H EL PP + ++L SSA+YLT+D++ KV + S
Sbjct: 498 MEHLDWNARTRIIMGTAYCLQYMH-ELNPPISHTKLVSSAIYLTDDYAAKVGEVPFS 553
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGU5|Y5457_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 213/493 (43%), Gaps = 85/493 (17%)
Query: 28 EFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLA 87
E AL + K + +D VLS W+ DPC W + CS +GF+
Sbjct: 39 EVAALMSVKNKM-KDEKEVLSGWDINSVDPCTWNMVGCSS---------------EGFVV 82
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L + L GI+ +G L L L L NQLTGPIP E+G L+ L +
Sbjct: 83 ----------SLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETL 132
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+L N +G +PA LG L L L L RN L G VP A L+GL
Sbjct: 133 DLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPH---------------LVAGLSGL 177
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTLCGGAPPARTRA 267
L D S+N G P GN Q LC A P R
Sbjct: 178 SFL------DLSFNNLSGPTPNI--SAKDYRIVGNAFLCGPASQE---LCSDATPVRNAT 226
Query: 268 GLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPW 327
GLS K D SKH S IV ++ ++FL + W
Sbjct: 227 GLSEK-----DNSKHHSL---VLSFAFGIVVAFIISLMFLF--------------FWVLW 264
Query: 328 KKSASEKDHIYIDSEI-LKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPE 384
+S + H+ D E + + RFS +E++ A +FS NI+G +VYKG + G
Sbjct: 265 HRSRLSRSHVQQDYEFEIGHLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTV 324
Query: 385 IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444
+AV L K+ +TG E+ FQ EV + H N +L G+C +P RMLV+ Y N
Sbjct: 325 VAVKRL--KDPIYTG--EVQFQTEVEMIGLAVHRNLLRLFGFCM--TPEERMLVYPYMPN 378
Query: 445 GTLYEHL--HYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502
G++ + L +YGE+ + W RR+ I +G ARGL YLH + P ++ ++ + L E F
Sbjct: 379 GSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESF 438
Query: 503 SPKVSPLCLSFLL 515
V L+ LL
Sbjct: 439 EAIVGDFGLAKLL 451
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LYN6|Y3565_ARATH Probable inactive receptor-like protein kinase At3g56050 OS=Arabidopsis thaliana GN=At3g56050 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 137/223 (61%), Gaps = 7/223 (3%)
Query: 294 LEIVTGTMVGVLFLVAGFTGLQRCKSKPSIII-PWKKSASEKDHIYIDSEILKDVVRFSR 352
+ IV G + G +F++ TG+ KSK + PW+ S + + + V + R
Sbjct: 145 IPIVAGCIAGAVFILLLATGVFFFKSKAGKSVNPWRTGLSGQ----LQKVFITGVPKLKR 200
Query: 353 QELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVAD 411
E+E ACEDFSN+IGS P ++KGT+ G EIAV S+ + WT +E+ F++++
Sbjct: 201 SEIEAACEDFSNVIGSCPIGTLFKGTLSSGVEIAVASVATASAKEWTNNIEMQFRKKIEM 260
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
L++INH+N LLGYC E PFTR+LVF+YASNGT++EHLHY E + W R++I +GI
Sbjct: 261 LSKINHKNFVNLLGYCEEEEPFTRILVFEYASNGTVFEHLHYKESEHLDWVMRLRIAMGI 320
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
A L ++H L PP S L SS+V LTED++ K++ +L
Sbjct: 321 AYCLDHMHG-LKPPIVHSNLLSSSVQLTEDYAVKIADFNFGYL 362
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SIZ4|Y2027_ARATH Inactive receptor-like serine/threonine-protein kinase At2g40270 OS=Arabidopsis thaliana GN=At2g40270 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 131/217 (60%), Gaps = 7/217 (3%)
Query: 293 TLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIII-PWKKSASEKDHIYIDSEILKDVVRFS 351
++ +V G + G FL+ TGL SK + PW+ S + + + +
Sbjct: 136 SVPLVVGCVGGAFFLLLVATGLYFFTSKAGKTVNPWRTGLSGQ----LQKVFVTGIPVLK 191
Query: 352 RQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIK-EEHWTGYLELYFQREVA 410
R E+E ACEDFSN+IGS P ++KGT+ G EIAV S + W E++F++++
Sbjct: 192 RSEIEAACEDFSNVIGSCPIGKLFKGTLSSGVEIAVASFATTTAKDWKDSTEIHFRKKIE 251
Query: 411 DLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIG 470
L++INH+N LLGYC E PFTR+L+F+YA NG+L+EHLHY E + W R++I +G
Sbjct: 252 MLSKINHKNFANLLGYCEEKEPFTRILIFEYAPNGSLFEHLHYKESEHLDWGMRLRIAMG 311
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
+A L ++H +L PP + L SS++ LTED++ KVS
Sbjct: 312 LAYCLDHMH-QLNPPIAHTNLVSSSLQLTEDYAVKVS 347
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 214/464 (46%), Gaps = 81/464 (17%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+ ++++SG+ G++A ELG L YL+ L L N L G IP G L RL L LG N L+
Sbjct: 549 IQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLS 608
Query: 132 GPIPPEIGNLTGL-VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
IP E+G LT L + +N+ N L+G +P LGNL LE L+L+ N+L G +PA
Sbjct: 609 ENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPAS----- 663
Query: 191 TANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQNKD 248
+ +L L + + S N VG++P + + S++F GN
Sbjct: 664 ----------------IGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGN------ 701
Query: 249 PKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLT------LEIVTGTMV 302
LC + + + + H S S+ WL+ + +T ++
Sbjct: 702 -----HGLC------------NSQRSHCQPLVPH-SDSKLNWLINGSQRQKILTITCIVI 743
Query: 303 GVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDSEILKDVVR--------FSRQE 354
G +FL+ F GL C W E + ++ + DV+ F+ Q
Sbjct: 744 GSVFLIT-FLGL--C---------WTIKRREPAFVALEDQTKPDVMDSYYFPKKGFTYQG 791
Query: 355 LEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADL 412
L A +FS ++G VYK M GG IAV L + E + + F+ E++ L
Sbjct: 792 LVDATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNSRGEGASS--DNSFRAEISTL 849
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER-CQVSWTRRMKIVIGI 471
+I H N KL G+C + + +L+++Y S G+L E L GE+ C + W R +I +G
Sbjct: 850 GKIRHRNIVKLYGFCYHQN--SNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRIALGA 907
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
A GL YLH + P ++ S+ + L E F V L+ L+
Sbjct: 908 AEGLCYLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLAKLI 951
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9C9N5|Y1668_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana GN=At1g66830 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 249/576 (43%), Gaps = 92/576 (15%)
Query: 7 LELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACS 66
L L F+L+ FA + ++ AL +FK++I V +NWN+ D++PC W G+ C
Sbjct: 6 LILCFILTH-FFAIATSL-NDQGLALLSFKQSIQNQSDSVFTNWNSSDSNPCSWQGVTC- 62
Query: 67 DARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLG 126
+ RV+ I + L G L P +G L L+ + L N+ G +P EL LK L+ L L
Sbjct: 63 NYDMRVVSIRLPNKRLSGSLDPSIGSLLSLRHINLRDNDFQGKLPVELFGLKGLQSLVLS 122
Query: 127 TNQLTGPIPPEIGNLTGLVKIN------------------------LQSNGLTGRLPAEL 162
N +G +P EIG+L L+ ++ L N +G LP L
Sbjct: 123 GNSFSGFVPEEIGSLKSLMTLDLSENSFNGSISLSLIPCKKLKTLVLSKNSFSGDLPTGL 182
Query: 163 G-NLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL------TGLCHLSQLKV 215
G NL+ L L+L NRL G +P + G N+ G S N T L +L +L
Sbjct: 183 GSNLVHLRTLNLSFNRLTGTIP--EDVGSLENLKGTLDLSHNFFSGMIPTSLGNLPELLY 240
Query: 216 ADFSYNFFVGSIPKCLEYLPS--TSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKH 273
D SYN G IPK L + +FQGN LCG P +
Sbjct: 241 VDLSYNNLSGPIPKFNVLLNAGPNAFQGNPF-----------LCG--LPIKISCSTRNTQ 287
Query: 274 QAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKS-------------- 319
+ ++ + L GT+ G++FL + F R S
Sbjct: 288 VVPSQLYTRRANHHSRLCIILTATGGTVAGIIFLASLFIYYLRKASARANKDQNNRTCHI 347
Query: 320 --------KPSIIIPWKKSASEKDHIYIDSEILKDVVRFSRQELEVACEDF----SNIIG 367
KP + +K SE + +D + V E+E + + ++G
Sbjct: 348 NEKLKKTTKPEFLC-FKTGNSESE--TLDENKNQQVFMPMDPEIEFDLDQLLKASAFLLG 404
Query: 368 SSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
S LVYK ++ G +AV L +++ W E F +V +A+I H N L C
Sbjct: 405 KSRIGLVYKVVLENGLMLAVRRL--EDKGWLRLKE--FLADVEAMAKIKHPNVLNLKACC 460
Query: 428 RESSPFTRMLVFDYASNGTLYEHLH---YGERC-QVSWTRRMKIVIGIARGLKYLHTELG 483
SP ++L++DY NG L + C Q++WT R+KI+ GIA+GL Y+H E
Sbjct: 461 W--SPEEKLLIYDYIPNGDLGSAIQGRPGSVSCKQLTWTVRLKILRGIAKGLTYIH-EFS 517
Query: 484 PP-FTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
P + +N+S + L + PKVS L ++ +S
Sbjct: 518 PKRYVHGHINTSNILLGPNLEPKVSGFGLGRIVDTS 553
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|C0LGF4|FEI1_ARATH LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 146/498 (29%), Positives = 221/498 (44%), Gaps = 92/498 (18%)
Query: 31 ALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPEL 90
AL +F+ A+ + W D DPC+W G+ C RV+ +N
Sbjct: 36 ALLSFRNAVTRSDSFI-HQWRPEDPDPCNWNGVTCDAKTKRVITLN-------------- 80
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
LTY + ++G +P ++G L L++L L N L G IP +GN T L +I+LQ
Sbjct: 81 --LTY--------HKIMGPLPPDIGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQ 130
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
SN TG +PAE+G+L L++L + N L G +PA L L
Sbjct: 131 SNYFTGPIPAEMGDLPGLQKLDMSSNTLSGPIPAS---------------------LGQL 169
Query: 211 SQLKVADFSYNFFVGSIPK--CLEYLPSTSFQGN---CLQNKDPKQRATTLCGGAPPART 265
+L + S NF VG IP L SF GN C ++ D + + G P + +
Sbjct: 170 KKLSNFNVSNNFLVGQIPSDGVLSGFSKNSFIGNLNLCGKHVDVVCQDDS---GNPSSHS 226
Query: 266 RAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVA--GFTG--LQRCKSKP 321
++G + K + + L I VG L LVA F G L + K
Sbjct: 227 QSGQNQKKNSGK----------------LLISASATVGALLLVALMCFWGCFLYKKLGKV 270
Query: 322 SIIIPWKKSASEKDHIYIDSEI---LKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGT 378
I K + ++ KD+++ +LE+ E+ +IIG VYK
Sbjct: 271 EIKSLAKDVGGGASIVMFHGDLPYSSKDIIK----KLEMLNEE--HIIGCGGFGTVYKLA 324
Query: 379 MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438
M G A+ + E + + +F+RE+ L I H L GYC +SP +++L+
Sbjct: 325 MDDGKVFALKRILKLNEGF----DRFFERELEILGSIKHRYLVNLRGYC--NSPTSKLLL 378
Query: 439 FDYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497
+DY G+L E LH GE Q+ W R+ I+IG A+GL YLH + P ++ SS +
Sbjct: 379 YDYLPGGSLDEALHERGE--QLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNIL 436
Query: 498 LTEDFSPKVSPLCLSFLL 515
L + +VS L+ LL
Sbjct: 437 LDGNLEARVSDFGLAKLL 454
|
Involved in the signaling pathway that regulates cell wall function, including cellulose biosynthesis, likely via an 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated signal (a precursor of ethylene). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 218/493 (44%), Gaps = 67/493 (13%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++IS +SL G + ELGL L + L+ N L G+IP LG L L L L +N+ G +
Sbjct: 629 LDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSL 688
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P EI +LT ++ + L N L G +P E+GNL +L L+L+ N+L G +P S G + +
Sbjct: 689 PTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGPLP--STIGKLSKL 746
Query: 195 HGMYASSANLTG-----LCHLSQLKVA-DFSYNFFVGSIPKCLEYLP---STSFQGNCLQ 245
+ S LTG + L L+ A D SYN F G IP + LP S N L
Sbjct: 747 FELRLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKLESLDLSHNQLV 806
Query: 246 NKDPKQRA------------TTLCGGAPPARTR---------AGL--SPKHQAAEDVSKH 282
+ P Q L G +R AGL SP SK+
Sbjct: 807 GEVPGQIGDMKSLGYLNLSYNNLEGKLKKQFSRWQADAFVGNAGLCGSPLSHCNRAGSKN 866
Query: 283 QSASRPAWLLTLEIVTG-------TMVGVLFLVAGFTGLQRCKSKPSIII--------PW 327
Q + P ++ + ++ +V +LF ++ + S P
Sbjct: 867 QRSLSPKTVVIISAISSLAAIALMVLVIILFFKQNHDLFKKVRGGNSAFSSNSSSSQAPL 926
Query: 328 KKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAV 387
+ K I D + + + +E +IGS VYK +K G IAV
Sbjct: 927 FSNGGAKSDIKWDD--IMEATHYLNEEF---------MIGSGGSGKVYKAELKNGETIAV 975
Query: 388 ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
+ K++ + F REV L I H + KL+GYC + +L+++Y +NG++
Sbjct: 976 KKILWKDDLMSNK---SFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSV 1032
Query: 448 YEHLHYGERCQ----VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503
++ LH E + + W R+KI +G+A+G++YLH + PP ++ SS V L +
Sbjct: 1033 WDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIE 1092
Query: 504 PKVSPLCLSFLLV 516
+ L+ +L
Sbjct: 1093 AHLGDFGLAKILT 1105
|
Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 521 | ||||||
| 255537421 | 690 | receptor kinase, putative [Ricinus commu | 0.967 | 0.730 | 0.786 | 0.0 | |
| 225426379 | 660 | PREDICTED: probable LRR receptor-like se | 0.971 | 0.766 | 0.777 | 0.0 | |
| 225426381 | 654 | PREDICTED: probable LRR receptor-like se | 0.959 | 0.764 | 0.771 | 0.0 | |
| 356497232 | 662 | PREDICTED: probable LRR receptor-like se | 0.971 | 0.764 | 0.725 | 0.0 | |
| 147800397 | 636 | hypothetical protein VITISV_020977 [Viti | 0.925 | 0.757 | 0.736 | 0.0 | |
| 356540452 | 662 | PREDICTED: probable LRR receptor-like se | 0.971 | 0.764 | 0.719 | 0.0 | |
| 356528148 | 661 | PREDICTED: probable LRR receptor-like se | 0.971 | 0.765 | 0.722 | 0.0 | |
| 224053933 | 646 | predicted protein [Populus trichocarpa] | 0.942 | 0.760 | 0.756 | 0.0 | |
| 356511498 | 633 | PREDICTED: probable LRR receptor-like se | 0.909 | 0.748 | 0.747 | 0.0 | |
| 357481645 | 672 | hypothetical protein MTR_5g010440 [Medic | 0.978 | 0.758 | 0.706 | 0.0 |
| >gi|255537421|ref|XP_002509777.1| receptor kinase, putative [Ricinus communis] gi|223549676|gb|EEF51164.1| receptor kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/510 (78%), Positives = 442/510 (86%), Gaps = 6/510 (1%)
Query: 1 MRSYSSL-ELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH 59
MRS++ L +LLFV++ VLF C +F +E ALTTFKEAI+EDP LVLSNWN LD+DPC
Sbjct: 1 MRSHTPLVQLLFVIASVLFVVCESFPKDEVEALTTFKEAIFEDPLLVLSNWNTLDSDPCD 60
Query: 60 WTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKR 119
W+GIACS ARDRV+KINI+G+SL+GF+ PELG +TYLQEL+LHGNNLIG IPKELG+LK
Sbjct: 61 WSGIACSFARDRVMKINITGASLRGFIPPELGRITYLQELVLHGNNLIGPIPKELGMLKY 120
Query: 120 LKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
LK+LDLG NQLTGPIPPEI NL +++INLQSNGLTG LP ELG L LEEL LDRNRLQ
Sbjct: 121 LKVLDLGVNQLTGPIPPEIANLNNVMRINLQSNGLTGHLPPELGTLKYLEELRLDRNRLQ 180
Query: 180 GAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF 239
G VPAG NS + +N HGMYAS N +GLC SQLKVAD SYNFFVGSIPKCL+YLPSTSF
Sbjct: 181 GTVPAGGNSDFPSNAHGMYAS--NSSGLCQASQLKVADLSYNFFVGSIPKCLKYLPSTSF 238
Query: 240 QGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSK-HQSASRPAWLLTLEIVT 298
QGNCL NKDPKQR+ CGGAPPAR + KHQ AEDVSK HQ AS+PAWLL LEIVT
Sbjct: 239 QGNCLHNKDPKQRSAAQCGGAPPARAHQTFNSKHQPAEDVSKQHQGASKPAWLLALEIVT 298
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
GTMVG LFLVA T QRC SK SIIIPWKKSAS+ DH +YIDSE+LKDV RFSRQELE
Sbjct: 299 GTMVGSLFLVAVLTAFQRCNSKSSIIIPWKKSASQNDHMAVYIDSEMLKDVARFSRQELE 358
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIGS PDSLVYKG +KGGPEIAVISLCIKEEHWTGYLELYFQ+EVADLAR++
Sbjct: 359 VACEDFSNIIGSCPDSLVYKGNIKGGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLD 418
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HENTGKLLGYCRES+PFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI++GIARGLK
Sbjct: 419 HENTGKLLGYCRESNPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIILGIARGLK 478
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKV 506
YLHTEL PPFTISELNSSAVYLTEDFSPKV
Sbjct: 479 YLHTELDPPFTISELNSSAVYLTEDFSPKV 508
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426379|ref|XP_002271860.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430 isoform 2 [Vitis vinifera] gi|297742540|emb|CBI34689.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/508 (77%), Positives = 440/508 (86%), Gaps = 2/508 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS SSL+LL+V+ GVLFA+C+AFA+NE AL T KE IYEDP VLS WN +D+DPC W
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI CS+ARD V+KINISGSSLKGFL PELG L+ LQELILHGNNLIG+IPKE+G LK L
Sbjct: 61 SGITCSEARDHVIKINISGSSLKGFLTPELGQLSSLQELILHGNNLIGVIPKEIGSLKNL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT +VKINL+SNGL+GRLP ELGNL LEEL LDRNRL+G
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VP + S + ++++GMYASS N+TGLC SQ KVADFSYNFFVGSIPKCL YLP TSFQ
Sbjct: 181 TVPGSNTSNFVSDVNGMYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGT 300
GNCLQ+ P+QR+T C PPA++ G+ PKHQ D KHQ S+PAWLL LEIVTGT
Sbjct: 241 GNCLQDTAPRQRSTVQCAVPPPAKSHPGVGPKHQPTLDGPKHQDTSKPAWLLALEIVTGT 300
Query: 301 MVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEVA 358
MVG L ++A T LQRCKSK SIIIPWKKSASEK+H +YIDSE+LKDV RFSRQELEVA
Sbjct: 301 MVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVA 360
Query: 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418
CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW GYLELYFQ+EVADLAR+NHE
Sbjct: 361 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHE 420
Query: 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI+IGI RGLKYL
Sbjct: 421 NTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYL 480
Query: 479 HTELGPPFTISELNSSAVYLTEDFSPKV 506
HTEL PPFTISELNSSAVY+TEDFSPK+
Sbjct: 481 HTELDPPFTISELNSSAVYITEDFSPKL 508
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426381|ref|XP_002271829.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/508 (77%), Positives = 432/508 (85%), Gaps = 8/508 (1%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS SSL+LL+V+ GVLFA+C+AFA+NE AL T KE IYEDP VLS WN +D+DPC W
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI CS+ARD V+KINISGSSLKGFL PELG L+ LQELILHGNNLIG+IPKE+G LK L
Sbjct: 61 SGITCSEARDHVIKINISGSSLKGFLTPELGQLSSLQELILHGNNLIGVIPKEIGSLKNL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT +VKINL+SNGL+GRLP ELGNL LEEL LDRNRL+G
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VP + YASS N+TGLC SQ KVADFSYNFFVGSIPKCL YLP TSFQ
Sbjct: 181 TVPVFHKK------NKKYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQ 234
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGT 300
GNCLQ+ P+QR+T C PPA++ G+ PKHQ D KHQ S+PAWLL LEIVTGT
Sbjct: 235 GNCLQDTAPRQRSTVQCAVPPPAKSHPGVGPKHQPTLDGPKHQDTSKPAWLLALEIVTGT 294
Query: 301 MVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEVA 358
MVG L ++A T LQRCKSK SIIIPWKKSASEK+H +YIDSE+LKDV RFSRQELEVA
Sbjct: 295 MVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVA 354
Query: 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418
CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW GYLELYFQ+EVADLAR+NHE
Sbjct: 355 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHE 414
Query: 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI+IGI RGLKYL
Sbjct: 415 NTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYL 474
Query: 479 HTELGPPFTISELNSSAVYLTEDFSPKV 506
HTEL PPFTISELNSSAVY+TEDFSPK+
Sbjct: 475 HTELDPPFTISELNSSAVYITEDFSPKL 502
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497232|ref|XP_003517466.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/510 (72%), Positives = 422/510 (82%), Gaps = 4/510 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ + L L +S + F + +NE WAL +FKEA+YEDP+ VLSNW+ +++DPC+W
Sbjct: 1 MKPCTLLLFLSFISTLSFVVSDTVPSNEVWALRSFKEAVYEDPYQVLSNWDTVESDPCNW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G+ C+ RD V+K+NISGSSLKGFLAPELG +TYLQ LILHGNN IG IP+ELG+L+ L
Sbjct: 61 FGVLCTMVRDHVIKLNISGSSLKGFLAPELGQITYLQALILHGNNFIGTIPRELGVLESL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT VKINLQSNGLTGRLP ELGNL L+EL LDRNRLQG
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTQAVKINLQSNGLTGRLPPELGNLRYLQELRLDRNRLQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+PAG +S + +N+HGMYAS N+TG C SQLKVADFS+NF VG IPKCLEYLP SFQ
Sbjct: 181 PIPAGGSSNFASNMHGMYASKENVTGFCRSSQLKVADFSFNFLVGRIPKCLEYLPRLSFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPP--ARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVT 298
GNCLQ ++ KQR++ C GA P A+++ ++P HQ AE VSKH AS+P WLL LEIVT
Sbjct: 241 GNCLQGQELKQRSSIQCAGASPASAKSQPVVNPNHQPAEYVSKHHRASKPVWLLALEIVT 300
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
GTMVG LFLVA QRC K SIIIPWKKS S+KDH +YID E LKDV R+SRQELE
Sbjct: 301 GTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPEFLKDVRRYSRQELE 360
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIGSSPDS+VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR+N
Sbjct: 361 VACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLN 420
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HEN GKLLGYCRE +PFTRMLVFDYASNGTL++HLHY E CQ SWTRRMKI IGIARGLK
Sbjct: 421 HENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHYEEGCQFSWTRRMKIAIGIARGLK 480
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKV 506
YLHTE+ PPFTISELNSSAVYLTE+FSPK+
Sbjct: 481 YLHTEVEPPFTISELNSSAVYLTEEFSPKL 510
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147800397|emb|CAN66410.1| hypothetical protein VITISV_020977 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/508 (73%), Positives = 418/508 (82%), Gaps = 26/508 (5%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS SSL+LL+V+ GVLFA+C+AFA+NE AL T KE IYEDP VLS WN +D+DPC W
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI CS+ARD V+KI ILHGNNLIG+IPKE+G LK L
Sbjct: 61 SGITCSEARDHVIKI------------------------ILHGNNLIGVIPKEIGSLKNL 96
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT +VKINL+SNGL+GRLP ELGNL LEEL LDRNRL+G
Sbjct: 97 KVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEG 156
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VP + S + ++++GMYASS N+TGLC SQ KVADFSYNFFVGSIPKCL YLP TSFQ
Sbjct: 157 TVPGSNTSSFVSDVNGMYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQ 216
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGT 300
GNCLQ+ P+QR+T C PPA++ G+ KHQ D KHQ S+PAWLL LEIVTGT
Sbjct: 217 GNCLQDTAPRQRSTVQCAVPPPAKSHPGVGXKHQPTLDGPKHQDTSKPAWLLALEIVTGT 276
Query: 301 MVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEVA 358
MVG L ++A T LQRCKSK SIIIPWKKSASEK+H +YIDSE+LKDV RFSRQELEVA
Sbjct: 277 MVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVA 336
Query: 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418
CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW GYLELYFQ+EVADLAR+NHE
Sbjct: 337 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHE 396
Query: 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI+IGI RGLKYL
Sbjct: 397 NTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYL 456
Query: 479 HTELGPPFTISELNSSAVYLTEDFSPKV 506
HTEL PPFTISELNSSAVY+TEDFSPK+
Sbjct: 457 HTELDPPFTISELNSSAVYITEDFSPKL 484
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540452|ref|XP_003538703.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/510 (71%), Positives = 426/510 (83%), Gaps = 4/510 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ +SL L ++S + F + +NE WAL +FKEA+YEDP+ VLSNW+ +++DPC+W
Sbjct: 1 MKPCTSLLFLALISALSFVVSDMVPSNEVWALRSFKEAVYEDPYQVLSNWDTVESDPCNW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G+ C+ RD V+K+NISGSSLKGFLAPELG +TYLQELILHGN+ IG IP+ELG+L+ L
Sbjct: 61 FGVLCTMLRDHVIKLNISGSSLKGFLAPELGQITYLQELILHGNSFIGTIPRELGVLESL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIP EIGNLT +VKINLQSNGLTGRLP ELGNL L+EL LDRNRLQG
Sbjct: 121 KVLDLGMNQLTGPIPAEIGNLTQVVKINLQSNGLTGRLPPELGNLRYLQELQLDRNRLQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VPAG ++ + +N+HGMYAS N+TG C SQLKVADFS+NF VGSIPKCLEYLP +FQ
Sbjct: 181 PVPAGGSANFASNMHGMYASKENVTGFCRSSQLKVADFSFNFLVGSIPKCLEYLPRLNFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPP--ARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVT 298
GNCLQ +D KQR++ C GA P A+++ ++P HQ AE VSKH AS+P WLL LEIVT
Sbjct: 241 GNCLQGQDLKQRSSIQCAGASPASAKSQPVVNPNHQPAEYVSKHHRASKPVWLLALEIVT 300
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
GTMVG LFLVA QRC K SIIIPWKKS S+KDH +YID E+LKDV R+SRQELE
Sbjct: 301 GTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPELLKDVRRYSRQELE 360
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIGSSPDS+VYKGTMKGGPEIAV+SLCI EEHWTGYLELYFQREVADLAR++
Sbjct: 361 VACEDFSNIIGSSPDSVVYKGTMKGGPEIAVVSLCINEEHWTGYLELYFQREVADLARLD 420
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
+EN GKLLGYCRE +PFTRMLVFDYASNGTL++HLHY E CQ SWTRRMKI IGIARGLK
Sbjct: 421 NENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHYEEGCQFSWTRRMKIAIGIARGLK 480
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKV 506
YLHTE+ PPFTISELNSSAVYLTE+FSPK+
Sbjct: 481 YLHTEVEPPFTISELNSSAVYLTEEFSPKL 510
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528148|ref|XP_003532667.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/509 (72%), Positives = 436/509 (85%), Gaps = 3/509 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ Y+SL LL ++S + F + E AL TFKEA+YEDPH+VLSNWN LD+D C W
Sbjct: 1 MKLYTSLLLLGLVSMLSFVASVMIPSGEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G++C+ RD V+K+N+SG+SL+GFLAPE G +TYLQELILHGN+LIG+IPKELG+L L
Sbjct: 61 NGVSCTATRDHVIKLNLSGASLRGFLAPEFGKITYLQELILHGNSLIGVIPKELGMLNSL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT ++KINLQSNGLTGRLP ELG L L+EL LDRN+LQG
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTQVMKINLQSNGLTGRLPPELGKLKYLQELRLDRNKLQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
++P G +S +++N+HGMYAS N+TG C LSQLKVADFSYNFFVGSIPKCL YLP +SFQ
Sbjct: 181 SLPGGGSSNFSSNMHGMYASGVNMTGFCRLSQLKVADFSYNFFVGSIPKCLAYLPRSSFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKH-QAAEDVSKHQSASRPAWLLTLEIVTG 299
GNCL KD KQR + C GA PA++ ++P++ A + V+KHQ AS+PAWLL LEIVTG
Sbjct: 241 GNCLHIKDIKQRISVQCAGASPAQSGPVVNPRYLPATKHVTKHQEASKPAWLLALEIVTG 300
Query: 300 TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEV 357
TMVG LF++A + +QRC +KPSIIIPWKKSAS KD+ ++IDSE+LKDV+ +SRQ+LEV
Sbjct: 301 TMVGSLFIIAILSAIQRCNNKPSIIIPWKKSASGKDYMAVHIDSEMLKDVMSYSRQDLEV 360
Query: 358 ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ACEDFSNIIGSSPDS+VYKGTMKGGPEIAVISLCIKE++WTGYLELYFQREVADLAR+NH
Sbjct: 361 ACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEDNWTGYLELYFQREVADLARLNH 420
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
+NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHY E CQ+SWTRRMKI+IGIARGLKY
Sbjct: 421 DNTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYEEGCQLSWTRRMKIIIGIARGLKY 480
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKV 506
LHTE+ P FTISELNS+AVYLTEDFSPK+
Sbjct: 481 LHTEIEPAFTISELNSNAVYLTEDFSPKL 509
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224053933|ref|XP_002298045.1| predicted protein [Populus trichocarpa] gi|222845303|gb|EEE82850.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/509 (75%), Positives = 436/509 (85%), Gaps = 18/509 (3%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRSY+SL+LL V S +LF TC+ FA +E WALT FKEAIYEDPH+VLS+WNALDADPC W
Sbjct: 1 MRSYASLQLLSVFSLLLFVTCDPFARDEVWALTAFKEAIYEDPHMVLSSWNALDADPCGW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI+CS A D V+KINI+G SL+GFLAPELG + +LQ+LILHGNNLIGIIPKELG+LK L
Sbjct: 61 SGISCSFAGDHVVKINITGYSLRGFLAPELGQIKFLQQLILHGNNLIGIIPKELGMLKYL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
++LDLG NQLTGPIPPEI NL ++KINLQSNGLTG LP ELGNL SL+EL LDRNR QG
Sbjct: 121 QVLDLGANQLTGPIPPEIANLISVIKINLQSNGLTGSLPPELGNLKSLQELRLDRNRFQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+VPA S+S +T++ YAS+ NLTGLC S+LKVADFSYNFF GSIPKCL YLPSTSFQ
Sbjct: 181 SVPASSSSDFTSS---AYASNTNLTGLCQASELKVADFSYNFFTGSIPKCLGYLPSTSFQ 237
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVS-KHQSASRPAWLLTLEIVTG 299
GNCLQNKD +QR+++LCG AED+S +H AS+PAWLL LEIVTG
Sbjct: 238 GNCLQNKDLRQRSSSLCG------------TYEMPAEDLSNQHPRASKPAWLLALEIVTG 285
Query: 300 TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHI--YIDSEILKDVVRFSRQELEV 357
TMVG LFL+A T LQRCK K S+IIPWKKS+S+KDH+ YIDSE+LKDVVRFSR ELEV
Sbjct: 286 TMVGCLFLIAFITALQRCKDKSSLIIPWKKSSSQKDHVTVYIDSEMLKDVVRFSRMELEV 345
Query: 358 ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ACEDFSNIIGSSPDSLVYKGT+KGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR+N+
Sbjct: 346 ACEDFSNIIGSSPDSLVYKGTVKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNN 405
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
EN GKLLGYC ES+PFTRMLVF+YASNGTLYEHLHYGE CQ++WTRRMKI+IGIARGLKY
Sbjct: 406 ENAGKLLGYCSESTPFTRMLVFEYASNGTLYEHLHYGEGCQLTWTRRMKIIIGIARGLKY 465
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKV 506
H EL PPFTISELNSS+VYLTEDFSPK+
Sbjct: 466 FHAELDPPFTISELNSSSVYLTEDFSPKL 494
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356511498|ref|XP_003524463.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/483 (74%), Positives = 421/483 (87%), Gaps = 9/483 (1%)
Query: 27 NEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFL 86
NE AL TFKEA+YEDPH+VLSNWN LD+D C W G++C+ RD V+K+N+SG+SL+GFL
Sbjct: 5 NEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDWNGVSCTATRDHVIKLNLSGASLRGFL 64
Query: 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
APE G +TYLQELILHGN+LIG+IPKELG+LK LK+LDLG NQLTGPIPPEIGNLT ++K
Sbjct: 65 APEFGKITYLQELILHGNSLIGVIPKELGMLKSLKVLDLGMNQLTGPIPPEIGNLTQVMK 124
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
INLQSNGLTGRLP ELG L L+EL LDRN+LQG++P G +S +++N+HGMYAS NLTG
Sbjct: 125 INLQSNGLTGRLPPELGKLKYLQELRLDRNKLQGSLPGGGSSNFSSNMHGMYASGVNLTG 184
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTLCGGAPPARTR 266
C SQLKVADFS NFFVGSIPKCL YLP +SFQGNCL KD KQR + C GA
Sbjct: 185 FCRSSQLKVADFSCNFFVGSIPKCLAYLPRSSFQGNCLHIKDIKQRTSVQCAGA------ 238
Query: 267 AGLSPKHQ-AAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIII 325
+ ++PK+Q A + V+KHQ AS+PAWLL LEIVTGTMVG LF++A T +QRC +K SIII
Sbjct: 239 SVVNPKYQPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFIIAILTAIQRCNNKSSIII 298
Query: 326 PWKKSASEKDH--IYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGP 383
PWKKSAS KD+ ++IDSE+LKDV+R+SRQ+LEVACEDFSNIIGSSPDS+VYKGTMKGGP
Sbjct: 299 PWKKSASGKDYMAVHIDSEMLKDVMRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGP 358
Query: 384 EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443
EIAVISLCI+E++WTGYLELYFQREVADLAR+NH+NTGKLLGYCRES+PFTRMLVF+YAS
Sbjct: 359 EIAVISLCIREDNWTGYLELYFQREVADLARLNHDNTGKLLGYCRESNPFTRMLVFEYAS 418
Query: 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503
NGTLYEHLHY E CQ+SWTRRMKI+IGIARGLKYLHTE+ PPFTISELNS+AVYLTEDFS
Sbjct: 419 NGTLYEHLHYEEGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFS 478
Query: 504 PKV 506
PK+
Sbjct: 479 PKL 481
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357481645|ref|XP_003611108.1| hypothetical protein MTR_5g010440 [Medicago truncatula] gi|355512443|gb|AES94066.1| hypothetical protein MTR_5g010440 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/514 (70%), Positives = 421/514 (81%), Gaps = 4/514 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ +S +L ++S + + +NE WALT+FKEAIYEDP+LVLSNWN L++D C+W
Sbjct: 1 MKFLASFLVLSLISTISLVNSDTLPSNEVWALTSFKEAIYEDPNLVLSNWNMLESDLCNW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G++C+ A D V+K+NISGSSLKGFLA ELG +TYL+ELILHGNNLIG IPKEL +LK L
Sbjct: 61 FGVSCTLAGDHVIKLNISGSSLKGFLAKELGQITYLEELILHGNNLIGTIPKELCVLKSL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
++LDLG NQLTGPIPPEIGNL LV INLQSNGLTGR+P E GNL L+EL LDRN+ QG
Sbjct: 121 EVLDLGMNQLTGPIPPEIGNLALLVNINLQSNGLTGRIPHEFGNLRYLKELRLDRNKFQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VPA +S + +N HGMYAS+ N+TG+C QL+VADFSYNF VGSIPKCLE+LP +FQ
Sbjct: 181 PVPASGSSNFASNTHGMYASNENVTGICRSPQLEVADFSYNFLVGSIPKCLEFLPRLNFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPK-HQAAEDVSKHQSASRPAWLLTLEIVTG 299
GNCLQ+ DPKQR +T CGGA PA+++ + + HQ V KH S P WLL LEIV G
Sbjct: 241 GNCLQSNDPKQRPSTQCGGASPAKSQPVVDHQFHQLGNHVRKHHGLSEPTWLLALEIVAG 300
Query: 300 TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEV 357
TMVG + L+A QRC +K SIIIPWKKSAS+K H +YID EILKDV R+SRQELE
Sbjct: 301 TMVGSVCLIAILAAFQRCNNKSSIIIPWKKSASQKYHTAVYIDPEILKDVRRYSRQELEE 360
Query: 358 ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ACEDFSNIIGSSPDS+VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVA+LAR+NH
Sbjct: 361 ACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLNH 420
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLK 476
ENTGKLLGYCRES+PF+RMLVFDYASNGTL+EHLH Y E CQ SWTRRMKI+IGIARGLK
Sbjct: 421 ENTGKLLGYCRESNPFSRMLVFDYASNGTLHEHLHCYEEGCQFSWTRRMKIIIGIARGLK 480
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510
YLHTE+ PPFTISELNSSAVYLTE+F+PKV C
Sbjct: 481 YLHTEVEPPFTISELNSSAVYLTEEFAPKVYSHC 514
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 521 | ||||||
| TAIR|locus:2163056 | 664 | AT5G41180 [Arabidopsis thalian | 0.955 | 0.75 | 0.556 | 4.5e-146 | |
| TAIR|locus:2124102 | 678 | MRH1 "morphogenesis of root ha | 0.454 | 0.349 | 0.383 | 2.6e-57 | |
| TAIR|locus:2182915 | 553 | AT5G07150 [Arabidopsis thalian | 0.666 | 0.627 | 0.314 | 2.3e-50 | |
| TAIR|locus:2078436 | 499 | AT3G56050 [Arabidopsis thalian | 0.474 | 0.494 | 0.370 | 3.3e-40 | |
| TAIR|locus:2063146 | 489 | AT2G40270 [Arabidopsis thalian | 0.493 | 0.525 | 0.365 | 1.9e-37 | |
| TAIR|locus:2171233 | 484 | AT5G58540 [Arabidopsis thalian | 0.332 | 0.357 | 0.435 | 4.4e-36 | |
| TAIR|locus:2013021 | 625 | SERK1 "somatic embryogenesis r | 0.328 | 0.273 | 0.359 | 5.8e-36 | |
| TAIR|locus:2206179 | 592 | FEI1 "FEI 1" [Arabidopsis thal | 0.330 | 0.290 | 0.310 | 7.5e-36 | |
| TAIR|locus:2026097 | 628 | SERK2 "somatic embryogenesis r | 0.328 | 0.272 | 0.359 | 4.9e-35 | |
| TAIR|locus:2033000 | 702 | AT1G25320 [Arabidopsis thalian | 0.495 | 0.367 | 0.317 | 2.8e-34 |
| TAIR|locus:2163056 AT5G41180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1427 (507.4 bits), Expect = 4.5e-146, P = 4.5e-146
Identities = 291/523 (55%), Positives = 358/523 (68%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
+ S L L+ ++ G LF +C+AFA+ E A+ FKEAIY+DP LV+SNWN + PC W
Sbjct: 5 LSSTMQLSLMSLVLGFLFVSCDAFASKEVEAVRRFKEAIYKDPLLVMSNWNVPNLSPCDW 64
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQEXXXXXXXXXXXXPXXXXXXXXX 120
GI CS ++D ++KINISG+S++GFL PELG +TYLQE P
Sbjct: 65 NGIKCSPSKDHIIKINISGTSMRGFLVPELGQITYLQELILRGNILMGTIPKEIGKLKKL 124
Query: 121 XXXXXGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
G N LTGPIP EIG L+ + INLQSNGL G+LP E+GNL L+EL + RNRL+G
Sbjct: 125 KILDLGNNHLTGPIPAEIGKLSRIKTINLQSNGLIGKLPPEIGNLKHLKELLIGRNRLRG 184
Query: 181 AVPAGSNSGYTANIHGMYAS--SANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
++P + + YAS SAN++GLC S KVADFSYNFF G +P CL+YLP TS
Sbjct: 185 SIPIAAKTSKK------YASNPSANISGLCKSSLFKVADFSYNFFEGRVPSCLDYLPITS 238
Query: 239 FQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVT 298
FQGNC++ D KQR + C AR ++ K KH+ ASR WL EIVT
Sbjct: 239 FQGNCMKTMDVKQRPLSEC-----ARLAVTVAKK--------KHR-ASRQTWLRNFEIVT 284
Query: 299 GTMVGVLFLVAGFTGLQRCXXXXXXXXXXXXXXXEKDH--IYIDSEILKDVVRFSRQELE 356
G+ VG+LFLV F+ C EK+ +Y+DSE+LKDV R++RQELE
Sbjct: 285 GSSVGLLFLVVMFSACSLCKIKRSLIVPWKKSASEKEKFTVYVDSEMLKDVSRYTRQELE 344
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNII SS +S +YKGT+KGG EIAVISLC+KEE+WTGYLEL FQREVA LAR+N
Sbjct: 345 VACEDFSNIIDSSAESQIYKGTIKGGTEIAVISLCVKEENWTGYLELNFQREVAALARLN 404
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HEN GKLLGYC+ES+PFTRMLVF+YASNGTLY+HLHY + VSW +RMKIVIGIARGLK
Sbjct: 405 HENAGKLLGYCKESTPFTRMLVFEYASNGTLYDHLHYADGSLVSWAKRMKIVIGIARGLK 464
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKVSPL-CLSFLLVSS 518
YLHTEL PPFT+SEL+S+AVYLTEDF+PK+ C + V S
Sbjct: 465 YLHTELHPPFTVSELSSTAVYLTEDFTPKLVDFECWKIIQVRS 507
|
|
| TAIR|locus:2124102 MRH1 "morphogenesis of root hair 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 97/253 (38%), Positives = 143/253 (56%)
Query: 262 PARTRAGLSP---KHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAG-FTGLQRC 317
P+ + SP K+Q ++ K S+ WL + I + VG+L +VA F +R
Sbjct: 292 PSPDKGSTSPDISKNQPQDN--KQSKGSKHVWLYVV-IAVASFVGLLIIVAVIFFCRKRA 348
Query: 318 XXXXXXXXXXXXXXXEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKG 377
+K + V + +R ELE ACEDFSNII + VYKG
Sbjct: 349 VKSIGPWKTGLSGQLQKAFV-------TGVPKLNRSELETACEDFSNIIETFDGYTVYKG 401
Query: 378 TMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436
T+ G EIAV S I E + WT +E+ ++R++ L+RINH+N L+GYC E PF RM
Sbjct: 402 TLSSGVEIAVASTAIAESKEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRM 461
Query: 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496
+VF+YA NGTL+EHLH E + W+ RM+I++G A L+++H + PP ++ NSS +
Sbjct: 462 MVFEYAPNGTLFEHLHDKETEHLDWSARMRIIMGTAYCLQHMHG-MNPPMAHTDFNSSEI 520
Query: 497 YLTEDFSPKVSPL 509
YLT+D++ KVS +
Sbjct: 521 YLTDDYAAKVSEI 533
|
|
| TAIR|locus:2182915 AT5G07150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 395 (144.1 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 120/382 (31%), Positives = 178/382 (46%)
Query: 144 LVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS-------GYTANIHG 196
+V +NL+ L G L ELGNL L+ L L N G VP N G
Sbjct: 77 VVILNLRDLSLQGTLAPELGNLTHLKSLILRNNSFSGKVPEEVTELQELEILDLCDNNFG 136
Query: 197 M-YASSANLTGLCHL-------SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKD 248
+ + L + S ++ + FF P+ + P T Q + N
Sbjct: 137 QPFPFARRLLQISPPPSQPSPPSPMEEVPIDFPFFFAPPPQNIGASPPTETQ--VIPNPS 194
Query: 249 PKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLV 308
P PPA+ +P Q +E H + + + I+ G +VGVL ++
Sbjct: 195 PVP--------PPPAQPPPAQTPPPQLSE--VPHAVNKKKSHKSKMYIIVGVLVGVLGVM 244
Query: 309 AGFTGLQRCXXXXXXXXXXXXXXXEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGS 368
A + + V + ELE ACEDFSNIIGS
Sbjct: 245 AALVAFFFLWNQKVKLIKPWGETGSSGQL--QDVVTTGVPKLKLAELETACEDFSNIIGS 302
Query: 369 -SPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGY 426
S D+ +YKGT+ G EIAV+++ + W+ E FQ + L+++NH+N ++GY
Sbjct: 303 TSSDATIYKGTLSTGSEIAVLAVASGSLQDWSEDHETQFQEK--RLSQVNHKNFLNVIGY 360
Query: 427 CRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGP-P 485
C E PF RMLVF+YA NG+L+EHLH + + W R++IV+GIA ++++H L P P
Sbjct: 361 CHEDEPFNRMLVFEYAPNGSLFEHLHDQDAEHLDWPMRLRIVMGIAYCMEHMHN-LNPKP 419
Query: 486 FTISELNSSAVYLTEDFSPKVS 507
+ + LNSS+VYL D++ KVS
Sbjct: 420 ISHTNLNSSSVYLATDYAAKVS 441
|
|
| TAIR|locus:2078436 AT3G56050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 96/259 (37%), Positives = 146/259 (56%)
Query: 260 APPARTRAGLSP-KHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQ--R 316
+PPA+ + P H + S+S+ + T+ IV G + G +F++ TG+ +
Sbjct: 112 SPPAQHVSAPPPFVHHVT--LPSLTSSSKTSSNSTIPIVAGCIAGAVFILLLATGVFFFK 169
Query: 317 CXXXXXXXXXXXXXXXEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYK 376
+ ++I V + R E+E ACEDFSN+IGS P ++K
Sbjct: 170 SKAGKSVNPWRTGLSGQLQKVFITG-----VPKLKRSEIEAACEDFSNVIGSCPIGTLFK 224
Query: 377 GTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435
GT+ G EIAV S+ + WT +E+ F++++ L++INH+N LLGYC E PFTR
Sbjct: 225 GTLSSGVEIAVASVATASAKEWTNNIEMQFRKKIEMLSKINHKNFVNLLGYCEEEEPFTR 284
Query: 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495
+LVF+YASNGT++EHLHY E + W R++I +GIA L ++H L PP S L SS+
Sbjct: 285 ILVFEYASNGTVFEHLHYKESEHLDWVMRLRIAMGIAYCLDHMHG-LKPPIVHSNLLSSS 343
Query: 496 VYLTEDFSPKVSPLCLSFL 514
V LTED++ K++ +L
Sbjct: 344 VQLTEDYAVKIADFNFGYL 362
|
|
| TAIR|locus:2063146 AT2G40270 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 102/279 (36%), Positives = 148/279 (53%)
Query: 247 KDPKQR---ATTLCGGAP-PA----RTRAGL--SP-KHQAAEDVSKHQSA---SRPAWL- 291
KD K R ATT +P PA T+A P K + +DVS SA + P
Sbjct: 73 KDRKNRVVAATTTPSSSPEPAPKHVSTKASTVSEPQKRSSTQDVSPSPSAPLANSPIPRN 132
Query: 292 --LTLEIVTGTMVGVLFLVAGFTGLQRCXXXXXXXXXXXXXXXEKDHIYIDSEILKDVVR 349
++ +V G + G FL+ TGL + + +
Sbjct: 133 SHSSVPLVVGCVGGAFFLLLVATGLYFFTSKAGKTVNPWRTGLSGQ---LQKVFVTGIPV 189
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQRE 408
R E+E ACEDFSN+IGS P ++KGT+ G EIAV S + W E++F+++
Sbjct: 190 LKRSEIEAACEDFSNVIGSCPIGKLFKGTLSSGVEIAVASFATTTAKDWKDSTEIHFRKK 249
Query: 409 VADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIV 468
+ L++INH+N LLGYC E PFTR+L+F+YA NG+L+EHLHY E + W R++I
Sbjct: 250 IEMLSKINHKNFANLLGYCEEKEPFTRILIFEYAPNGSLFEHLHYKESEHLDWGMRLRIA 309
Query: 469 IGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
+G+A L ++H +L PP + L SS++ LTED++ KVS
Sbjct: 310 MGLAYCLDHMH-QLNPPIAHTNLVSSSLQLTEDYAVKVS 347
|
|
| TAIR|locus:2171233 AT5G58540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 78/179 (43%), Positives = 117/179 (65%)
Query: 342 EILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCI-KEEHWTGY 400
+++ DV R EL+ ACEDFSN+IGS D +YKGT+ G EIAV+S+ W+
Sbjct: 184 DLITDVPRLQLSELQAACEDFSNVIGSFSDGTIYKGTLSTGAEIAVVSIVAGSRSDWSTT 243
Query: 401 LELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVS 460
++ +++ +L++++H+N ++GYC E PF RMLVF+YA NG+L EHLH +
Sbjct: 244 MDTQLLQKMHNLSKVDHKNFLNVIGYCLEEEPFKRMLVFEYAPNGSLSEHLHSQYVEHLD 303
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSI 519
W R++IV+GIA L+++H L PP +S L+SS+VYLTED + KVS F +++SI
Sbjct: 304 WPTRLRIVMGIAYCLEHMHN-LNPPILLSNLDSSSVYLTEDNAAKVS----DFSVINSI 357
|
|
| TAIR|locus:2013021 SERK1 "somatic embryogenesis receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 232 (86.7 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 65/181 (35%), Positives = 94/181 (51%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA + FSN I+G VYKG + G +AV L KEE
Sbjct: 279 DPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRL--KEER 336
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER 456
G EL FQ EV ++ H N +L G+C +P R+LV+ Y +NG++ L
Sbjct: 337 TPGG-ELQFQTEVEMISMAVHRNLLRLRGFCM--TPTERLLVYPYMANGSVASCLRERPP 393
Query: 457 CQ--VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
Q + W R +I +G ARGL YLH P ++ ++ + L E+F V L+ L
Sbjct: 394 SQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 453
Query: 515 L 515
+
Sbjct: 454 M 454
|
|
| TAIR|locus:2206179 FEI1 "FEI 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 250 (93.1 bits), Expect = 7.5e-36, Sum P(2) = 7.5e-36
Identities = 55/177 (31%), Positives = 86/177 (48%)
Query: 31 ALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPEL 90
AL +F+ A+ + W D DPC+W G+ C RV+ +N++ + G L P++
Sbjct: 36 ALLSFRNAVTRSDSFI-HQWRPEDPDPCNWNGVTCDAKTKRVITLNLTYHKIMGPLPPDI 94
Query: 91 GLLTYLQEXXXXXXXXXXXXPXXXXXXXXXXXXXXGTNQLTGPIPPEIGNLTGLVKINLQ 150
G L +L+ P +N TGPIP E+G+L GL K+++
Sbjct: 95 GKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFTGPIPAEMGDLPGLQKLDMS 154
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA-GSNSGYTANIHGMYASSANLTG 206
SN L+G +PA LG L L ++ N L G +P+ G SG++ N + + NL G
Sbjct: 155 SNTLSGPIPASLGQLKKLSNFNVSNNFLVGQIPSDGVLSGFSKN---SFIGNLNLCG 208
|
|
| TAIR|locus:2026097 SERK2 "somatic embryogenesis receptor-like kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 234 (87.4 bits), Expect = 4.9e-35, Sum P(2) = 4.9e-35
Identities = 65/181 (35%), Positives = 96/181 (53%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA + FSN I+G VYKG + G +AV L KEE
Sbjct: 282 DPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRL--KEER 339
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER 456
G EL FQ EV ++ H N +L G+C +P R+LV+ Y +NG++ L
Sbjct: 340 TPGG-ELQFQTEVEMISMAVHRNLLRLRGFCM--TPTERLLVYPYMANGSVASCLRERPP 396
Query: 457 CQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
Q+ +W+ R +I +G ARGL YLH P ++ ++ + L E+F V L+ L
Sbjct: 397 SQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARL 456
Query: 515 L 515
+
Sbjct: 457 M 457
|
|
| TAIR|locus:2033000 AT1G25320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 288 (106.4 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 85/268 (31%), Positives = 122/268 (45%)
Query: 3 SYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTG 62
S SL +F+L NA +E +AL T K++I +DP LSNWN+ + +PC W G
Sbjct: 2 SVGSLLFMFLLIWNFNGELNAL-NDEGFALLTLKQSISKDPDGSLSNWNSENQNPCSWNG 60
Query: 63 IACSDARDRVLKINISGSSLKGFLAPELGLLTYLQEXXXXXXXXXXXXPXXXXXXXXXXX 122
+ C D + V+ ++I L G+L LGLL+ L+ P
Sbjct: 61 VTCDDNKV-VVSLSIPKKKLLGYLPSSLGLLSNLRHLNLRSNELSGNLPVELFKAQGLQS 119
Query: 123 XXXGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAV 182
N L+G IP EIG+L L ++L N L G +P + L L +N L G+V
Sbjct: 120 LVLYGNFLSGSIPNEIGDLKFLQILDLSRNSLNGSIPESVLKCNRLRSFDLSQNNLTGSV 179
Query: 183 PAGSNSGYTANIHGMYASSANLTGLC-----HLSQLK-VADFSYNFFVGSIPKCLEYLPS 236
P+G A++ + SS NL GL +L++L+ D S+N F GSIP L LP
Sbjct: 180 PSGFGQSL-ASLQKLDLSSNNLIGLVPDDLGNLTRLQGTLDLSHNSFSGSIPASLGNLPE 238
Query: 237 TSFQGNCLQN-KDPKQRATTLCGGAPPA 263
+ N P + L P A
Sbjct: 239 KVYVNLAYNNLSGPIPQTGALVNRGPTA 266
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| C0LGH8 | Y1634_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.6901 | 0.9635 | 0.7560 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 521 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-25 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-23 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-21 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-18 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-18 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-13 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-12 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-10 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-10 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-10 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-10 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-09 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 6e-09 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 2e-08 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-07 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 3e-07 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-07 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 7e-07 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 8e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-06 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 2e-06 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-05 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-05 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 7e-05 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 8e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 1e-04 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 3e-04 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-04 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 5e-04 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 5e-04 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 5e-04 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 7e-04 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 0.001 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 0.001 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 0.001 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 0.002 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 0.003 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 4e-25
Identities = 86/289 (29%), Positives = 124/289 (42%), Gaps = 60/289 (20%)
Query: 17 LFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKIN 76
LF + E L +FK +I DP LSNWN+ AD C W GI C+++ RV+ I+
Sbjct: 19 LFLNFSMLHAEELELLLSFKSSI-NDPLKYLSNWNS-SADVCLWQGITCNNS-SRVVSID 75
Query: 77 ISGSSLKGFLAPEL---------------------------------------------- 90
+SG ++ G ++ +
Sbjct: 76 LSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIP 135
Query: 91 -GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
G + L+ L L N L G IP ++G LK+LDLG N L G IP + NLT L + L
Sbjct: 136 RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTL 195
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206
SN L G++P ELG + SL+ ++L N L G +P G +++ + NLTG
Sbjct: 196 ASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIP--YEIGGLTSLNHLDLVYNNLTGPIP 253
Query: 207 --LCHLSQLKVADFSYNFFVGSIPKC---LEYLPSTSFQGNCLQNKDPK 250
L +L L+ N G IP L+ L S N L + P+
Sbjct: 254 SSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPE 302
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 8e-23
Identities = 111/428 (25%), Positives = 177/428 (41%), Gaps = 88/428 (20%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
L+ L L N G +P++LG L L L L N+L+G IP E+ + LV ++L N L+
Sbjct: 477 LENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLS 536
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKV 215
G++PA + L +L L +N+L G +P NL + L Q+ +
Sbjct: 537 GQIPASFSEMPVLSQLDLSQNQLSGEIPK------------------NLGNVESLVQVNI 578
Query: 216 ADFSYNFFVGSIPKCLEYLP--STSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKH 273
S+N GS+P +L +++ GN LCGG T +GL P
Sbjct: 579 ---SHNHLHGSLPSTGAFLAINASAVAGN-----------IDLCGG----DTTSGLPP-- 618
Query: 274 QAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASE 333
+ V K P+W + G + + + GF R ++ + K
Sbjct: 619 --CKRVRK-----TPSWWFYITCTLGAFLVLALVAFGFV-FIRGRNNLEL-----KRVEN 665
Query: 334 KDHI----YIDSEILKDV----VRFSRQELEVACEDFSNIIGSSPDSLVYKG-TMKGGPE 384
+D + DS++ K + + S +E N+I YKG ++K G
Sbjct: 666 EDGTWELQFFDSKVSKSITINDILSSLKE--------ENVISRGKKGASYKGKSIKNG-- 715
Query: 385 IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444
+ +KE + + +AD+ ++ H N KL+G CR S L+ +Y
Sbjct: 716 ---MQFVVKEINDVNSIPSSE---IADMGKLQHPNIVKLIGLCR--SEKGAYLIHEYIEG 767
Query: 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504
L E L +SW RR KI IGIA+ L++LH P + L+ + + P
Sbjct: 768 KNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEP 822
Query: 505 KVSPLCLS 512
L LS
Sbjct: 823 H---LRLS 827
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 96.8 bits (241), Expect = 5e-21
Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++ G+ L G + L LT L+ L L N L+G IP+ELG +K LK + LG N L+G I
Sbjct: 169 LDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEI 228
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P EIG LT L ++L N LTG +P+ LGNL +L+ L L +N+L G +P S +
Sbjct: 229 PYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFS--LQKL 286
Query: 195 HGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLP 235
+ S +L+G + L L++ N F G IP L LP
Sbjct: 287 ISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLP 332
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 1e-18
Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 71 RVLK-INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129
+ LK I + ++L G + E+G LT L L L NNL G IP LG LK L+ L L N+
Sbjct: 212 KSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNK 271
Query: 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
L+GPIPP I +L L+ ++L N L+G +P + L +LE LHL N G +P S
Sbjct: 272 LSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL 331
Query: 190 YTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCL 231
+ ++ S +G L + L V D S N G IP+ L
Sbjct: 332 PRLQVLQLW--SNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL 376
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 1e-18
Identities = 51/147 (34%), Positives = 72/147 (48%), Gaps = 15/147 (10%)
Query: 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDADPC----H-WTGIAC---SDARDRVLK-IN 76
E AL T K ++ WN DPC H W+G C S + +
Sbjct: 371 LEEVSALQTLKSSLGLPLRF---GWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLG 424
Query: 77 ISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP 136
+ L+GF+ ++ L +LQ + L GN++ G IP LG + L++LDL N G IP
Sbjct: 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE 484
Query: 137 EIGNLTGLVKINLQSNGLTGRLPAELG 163
+G LT L +NL N L+GR+PA LG
Sbjct: 485 SLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 5e-14
Identities = 42/114 (36%), Positives = 66/114 (57%)
Query: 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129
R+ +++S + G + +LG L+ L +L L N L G IP EL K+L LDL NQ
Sbjct: 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQ 534
Query: 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
L+G IP + L +++L N L+G +P LGN+ SL ++++ N L G++P
Sbjct: 535 LSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 1e-13
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L LQ L L N G IPK LG L +LDL TN LTG IP + + L K+ L SN
Sbjct: 331 LPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSN 390
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA--NIHGMYASSANLTG---- 206
L G +P LG SL + L N G +P S +T ++ + S+ NL G
Sbjct: 391 SLEGEIPKSLGACRSLRRVRLQDNSFSGELP----SEFTKLPLVYFLDISNNNLQGRINS 446
Query: 207 -LCHLSQLKVADFSYNFFVGSIP 228
+ L++ + N F G +P
Sbjct: 447 RKWDMPSLQMLSLARNKFFGGLP 469
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 3e-13
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
+G VY K + I IK+E + LE RE+ L ++NH N KL G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIK-IIKKEDSSSLLE-ELLREIEILKKLNHPNIVKLYG 58
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ + LV +Y G+L + L E +S ++I++ I GL+YLH
Sbjct: 59 VFEDENHL--YLVMEYCEGGSLKDLLKENEGK-LSEDEILRILLQILEGLEYLH 109
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 2e-12
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQEL-ILH--GNNLIGIIPKELGLLKRLKILDLGT 127
+++ +++S +SL G + PEL + LQ L ILH NN G IP L L RL++L L +
Sbjct: 285 KLISLDLSDNSLSGEI-PEL--VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
N+ +G IP +G L ++L +N LTG +P L + +L +L L N L+G +P
Sbjct: 342 NKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIP 397
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 1e-10
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++S ++L G + L L +LIL N+L G IPK LG + L+ + L N +G +
Sbjct: 361 LDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGEL 420
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P E L + +++ +N L GR+ + ++ SL+ L L RN+ G +P S
Sbjct: 421 PSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS------ 474
Query: 195 HGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLP 235
+L+ D S N F G++P+ L L
Sbjct: 475 ----------------KRLENLDLSRNQFSGAVPRKLGSLS 499
|
Length = 968 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 1e-10
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 374 VYKGTMKGGP-----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
VYKG +KG E+AV +L KE+ +E F RE + +++H N KLLG C
Sbjct: 15 VYKGKLKGKGGKKKVEVAVKTL--KEDASEQQIEE-FLREARIMRKLDHPNVVKLLGVCT 71
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
E P +V +Y G L +L R ++S + + + IARG++YL
Sbjct: 72 EEEPL--YIVMEYMEGGDLLSYLRK-NRPKLSLSDLLSFALQIARGMEYLE 119
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 1e-10
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 374 VYKGTMKGGP-----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
VYKGT+KG E+AV +L KE+ +E F RE + +++H N KLLG C
Sbjct: 15 VYKGTLKGKGDGKEVEVAVKTL--KEDASEQQIEE-FLREARIMRKLDHPNIVKLLGVCT 71
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
E P M+V +Y G L ++L ++S + + + IARG++YL
Sbjct: 72 EEEPL--MIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE 120
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 61.0 bits (149), Expect = 2e-10
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 374 VYKGTMKGGPEIAVISLCIK-------EEHWTGYLELYFQREVADLARINHENTGKLLGY 426
VYKGT+KG E + +K EE F E + + +++H N +LLG
Sbjct: 15 VYKGTLKGDGEGTETKVAVKTLKEGASEEEREE-----FLEEASIMKKLSHPNIVRLLGV 69
Query: 427 CRESSPFTRMLVFDYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLKYLH 479
C + P +V +Y G L + L +GE+ + +++ + IA+G++YL
Sbjct: 70 CTQGEPL--YIVTEYMPGGDLLDFLRKHGEKLTLKD--LLQMALQIAKGMEYLE 119
|
Length = 258 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 3e-10
Identities = 51/150 (34%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 82 LKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL 141
L G + P + L L L L N+L G IP+ + L+ L+IL L +N TG IP + +L
Sbjct: 272 LSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL 331
Query: 142 TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS 201
L + L SN +G +P LG +L L L N L G +P G SS
Sbjct: 332 PRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG------------LCSS 379
Query: 202 ANLTGLCHLSQLKVADFSYNFFVGSIPKCL 231
NL L S N G IPK L
Sbjct: 380 GNLFKLILFS---------NSLEGEIPKSL 400
|
Length = 968 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.5 bits (140), Expect = 3e-09
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 374 VYKGTMKGGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
VYKG +KG E+AV +L KE+ + F +E + ++ H N +LLG C E
Sbjct: 11 VYKGKLKGKDGKTTEVAVKTL--KEDASEEERKD-FLKEARVMKKLGHPNVVRLLGVCTE 67
Query: 430 SSPFTRMLVFDYASNGTLYEHL-------HYGERCQVSWTRRMKIVIGIARGLKYLH 479
P LV +Y G L ++L E+ +S + I IA+G++YL
Sbjct: 68 EEPL--YLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA 122
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 6e-09
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 31 ALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACS 66
AL FK ++ DP LS+WN +DPC WTG+ C
Sbjct: 7 ALLAFKSSLNGDPSGALSSWNPSSSDPCSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLK-RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
LT L L L NN I IP +GLLK LK LDL N++ +P + NL L ++L
Sbjct: 115 LTNLTSLDL-DNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQ 179
N L+ LP L NL +L L L N++
Sbjct: 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS 199
|
Length = 394 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 365 IIGSSPDSLVYKGTMKGGPEI-AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
+GS VYK KG +I AV L + E + +RE+ L R++H N +L
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSK--KDQTARREIRILRRLSHPNIVRL 63
Query: 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ + LV +Y G L+++L +S KI + I RGL+YLH
Sbjct: 64 IDAFEDKD--HLYLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLH 115
|
Length = 260 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 355 LEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLE---LYFQREV 409
++ + +IG V +G +K G EI V IK G + L F E
Sbjct: 1 IDPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDV---AIKTLK-AGSSDKQRLDFLTEA 56
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ + + +H N +L G +S P M++ +Y NG+L + L + + + + + ++
Sbjct: 57 SIMGQFDHPNIIRLEGVVTKSRPV--MIITEYMENGSLDKFLRENDG-KFTVGQLVGMLR 113
Query: 470 GIARGLKYL 478
GIA G+KYL
Sbjct: 114 GIASGMKYL 122
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 5e-07
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 86 LAPELGLLTY-LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
+ P +GLL L+EL L N I +P L L LK LDL N L+ +P + NL+ L
Sbjct: 131 IPPLIGLLKSNLKELDLSDNK-IESLPSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSNL 188
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
++L N ++ LP E+ L +LEEL L N +
Sbjct: 189 NNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII 222
|
Length = 394 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 7e-07
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 374 VYKGTMKGGPE------IAVISL-CIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426
V+ KG E + V +L K+E+ L+ F+RE+ +++H+N +LLG
Sbjct: 21 VFLAKAKGIEEEGGETLVLVKALQKTKDEN----LQSEFRRELDMFRKLSHKNVVRLLGL 76
Query: 427 CRESSPFTRMLVFDYASNGTLYEHL-------HYGERCQVSWTRRMKIVIGIARGLKYLH 479
CRE+ P ++ +Y G L + L + +S +++ + IA G+ +L
Sbjct: 77 CREAEPH--YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS 134
Query: 480 TELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
F +L + ++ KVS L LS
Sbjct: 135 NA---RFVHRDLAARNCLVSSQREVKVSLLSLS 164
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 50.2 bits (121), Expect = 8e-07
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VY K ++ I IK++ E RE+ L ++ H N +L +
Sbjct: 15 VYLARDKKTGKLVAIK-VIKKKKIKKDRE-RILREIKILKKLKHPNIVRLYDVFEDEDKL 72
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
LV +Y G L++ L R R + I L+YLH
Sbjct: 73 Y--LVMEYCEGGDLFDLLKKRGRLSEDEAR--FYLRQILSALEYLH 114
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 52/198 (26%), Positives = 77/198 (38%), Gaps = 47/198 (23%)
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ L + GL G +P ++ L L+ ++L N ++G +P S ++T
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPP---------------SLGSITS 467
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPS---TSFQGNCLQNKDPKQRATTLCGGAPPA 263
L +V D SYN F GSIP+ L L S + GN L + P GG
Sbjct: 468 L------EVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAA-----LGGRLLH 516
Query: 264 RTR------AGLS--PKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQ 315
R AGL P +A H S + I G V LFLV +
Sbjct: 517 RASFNFTDNAGLCGIPGLRAC---GPHLSVG-----AKIGIAFGVSVAFLFLVIC--AMC 566
Query: 316 RCKSKPSIIIPWKKSASE 333
K + +I+ + +A E
Sbjct: 567 WWKRRQNILRAQRIAARE 584
|
Length = 623 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 14/86 (16%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY----------- 453
F+RE L HEN K G C E P ++VF+Y +G L + L
Sbjct: 55 FEREAELLTNFQHENIVKFYGVCTEGDPP--IMVFEYMEHGDLNKFLRSHGPDAAFLKSP 112
Query: 454 -GERCQVSWTRRMKIVIGIARGLKYL 478
+++ ++ ++I + IA G+ YL
Sbjct: 113 DSPMGELTLSQLLQIAVQIASGMVYL 138
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
L PE+ LL+ L+EL L N++I + L LK L L+L N+L IGNL+ L
Sbjct: 201 LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPES-IGNLSNLE 258
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
++L +N ++ + + LG+L +L EL L N L A+P
Sbjct: 259 TLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPL 295
|
Length = 394 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 19/122 (15%)
Query: 374 VYKGTMKG-GPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VYKG + G ++ S+ IK +E+ ++ F++E ++ + H N LLG C +
Sbjct: 21 VYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80
Query: 431 SPFTRMLVFDYASNGTLYEHL-----HYGERCQVSWTRRMK---------IVIGIARGLK 476
P T ML F+Y ++G L+E L H + I I IA G++
Sbjct: 81 QP-TCML-FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGME 138
Query: 477 YL 478
YL
Sbjct: 139 YL 140
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VYKG +KG E+AV + C L+ F +E L + +H N KL+G C + P
Sbjct: 11 VYKGVLKGNTEVAVKT-C--RSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPI 67
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+V + G+L L ++ +++ + +++ + A G++YL
Sbjct: 68 --YIVMELVPGGSLLTFLR-KKKNRLTVKKLLQMSLDAAAGMEYL 109
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 7e-05
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQSNGL 154
L+ L L N L I L LK+LDL N LT I PE L L ++L N L
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTS-ISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 8e-05
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 22/94 (23%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY----------- 453
FQRE A +A +H N KLLG C P L+F+Y + G L E L +
Sbjct: 55 FQREAALMAEFDHPNIVKLLGVCAVGKPMC--LLFEYMAYGDLNEFLRHRSPRAQCSLSH 112
Query: 454 ---------GERCQVSWTRRMKIVIGIARGLKYL 478
+S T ++ I +A G+ YL
Sbjct: 113 STSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL 146
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 1e-04
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 119 RLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNR 177
LK LDL N+LT IP L L ++L N LT P L SL L L N
Sbjct: 1 NLKSLDLSNNRLTV-IPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 178 L 178
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL--HYGERCQVSWT 462
F E L + +H N +L G + T M+V +Y SNG L L H G Q+
Sbjct: 53 FLAEALTLGQFDHSNIVRLEGVITRGN--TMMIVTEYMSNGALDSFLRKHEG---QLVAG 107
Query: 463 RRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
+ M ++ G+A G+KYL +E+G + L + V + D K+S
Sbjct: 108 QLMGMLPGLASGMKYL-SEMG--YVHKGLAAHKVLVNSDLVCKIS 149
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 32/187 (17%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKG-----TMKGGPEIAVISL--CIKEEHWTGYLELYFQ 406
EL ++ F +G +YKG M +A+ +L + W FQ
Sbjct: 1 ELPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE-----FQ 55
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-----HYGERCQVSW 461
+E + +A ++H N LLG + P ++F+Y + G L+E L H C
Sbjct: 56 QEASLMAELHHPNIVCLLGVVTQEQPVC--MLFEYLNQGDLHEFLIMRSPHSDVGCSSDE 113
Query: 462 TRRMK----------IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511
+K I I IA G++YL + F +L + + + E K+S L L
Sbjct: 114 DGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGL 170
Query: 512 SFLLVSS 518
S + S+
Sbjct: 171 SREIYSA 177
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 366 IGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
+G +V +G GG I V C+K + + ++ F +E A + ++HEN +L
Sbjct: 3 LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMD-DFLKEAAIMHSLDHENLIRL 61
Query: 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
G M+V + A G+L + L + + IA G++YL
Sbjct: 62 YGVVLTHP---LMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE 114
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L ++HEN K G C + + L+ +Y +G+L ++L R Q++ R
Sbjct: 53 FEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQ-RHRDQINLKRL 111
Query: 465 MKIVIGIARGLKYLHT 480
+ I +G+ YL +
Sbjct: 112 LLFSSQICKGMDYLGS 127
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 96 LQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPPEIGNLTGLVKI 147
L++L+L N L G + K L + LK L+L N + + + L +
Sbjct: 139 LEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVL 198
Query: 148 NLQSNGLT----GRLPAELGNLISLEELHLDRNRL 178
+L +NGLT L L +L SLE L+L N L
Sbjct: 199 DLNNNGLTDEGASALAETLASLKSLEVLNLGDNNL 233
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
IG V G +G ++AV C+K++ F E + + + H N
Sbjct: 9 KLGATIGKGEFGDVMLGDYRG-QKVAV--KCLKDD---STAAQAFLAEASVMTTLRHPNL 62
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+LLG + +P +V +Y + G+L ++L R ++ +++ + + G++YL
Sbjct: 63 VQLLGVVLQGNPL--YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE 120
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+ F +L + V ++ED KVS L+
Sbjct: 121 K---NFVHRDLAARNVLVSEDLVAKVSDFGLA 149
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT-GLVKIN 148
L L L L L+ N L I + L L L LDL N +T IPP IG L L +++
Sbjct: 89 LLNLLPLPSLDLNLNRLRSNISELLEL-TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELD 146
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS 188
L N + LP+ L NL +L+ L L N L SN
Sbjct: 147 LSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNL 185
|
Length = 394 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.001
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL-ELYFQREVADLARINHENT 420
IGS LV+ G ++A+ + I+E G + E F E + +++H
Sbjct: 8 LVQEIGSGQFGLVWLGYWLEKRKVAIKT--IRE----GAMSEEDFIEEAQVMMKLSHPKL 61
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+L G C E SP LVF++ +G L ++L +R + S + + + + G+ YL
Sbjct: 62 VQLYGVCTERSPIC--LVFEFMEHGCLSDYLR-AQRGKFSQETLLGMCLDVCEGMAYL 116
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESS 431
VY+G K +AV +L KE+ +E+ F +E A + I H N +LLG C
Sbjct: 22 VYEGVWKKYSLTVAVKTL--KEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 75
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
PF ++ ++ + G L ++L R +V+ + + I+ ++YL
Sbjct: 76 PF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 120
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------- 455
F +EV L+R++ N +LLG C P ++ +Y NG L + L
Sbjct: 66 FLKEVKILSRLSDPNIARLLGVCTVDPPL--CMIMEYMENGDLNQFLQKHVAETSGLACN 123
Query: 456 RCQVSWTRRMKIVIGIARGLKYL 478
+S++ + + IA G++YL
Sbjct: 124 SKSLSFSTLLYMATQIASGMRYL 146
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 374 VYKGT--MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V KG MK G E+ V +K+EH + F RE + +A+++H +L+G C +
Sbjct: 11 VVKGVYLMKSGKEVEVAVKTLKQEHIAA-GKKEFLREASVMAQLDHPCIVRLIGVC-KGE 68
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P MLV + A G L ++L VS + + +A G+ YL
Sbjct: 69 PL--MLVMELAPLGPLLKYLKKRREIPVSDLKEL--AHQVAMGMAYL 111
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.004
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-----HYGER 456
+L F +EV +NH N + LG C ES P+ +LV ++ G L +L +
Sbjct: 39 QLLFLQEVQPYRELNHPNVLQCLGQCIESIPY--LLVLEFCPLGDLKNYLRSNRGMVAQM 96
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513
Q +RM +A GL +LH F S+L LT D S K+ L+
Sbjct: 97 AQKDVLQRM--ACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLAL 148
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 521 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.97 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.97 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.97 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.97 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.96 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.96 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.95 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.95 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.95 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.95 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.95 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.95 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.95 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.94 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.94 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.94 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.94 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.94 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.94 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.94 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.94 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.94 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.94 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.94 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.93 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.93 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.93 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.93 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.92 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.92 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.92 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.92 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.92 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.92 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.92 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.92 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.92 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.92 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.92 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.92 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.92 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.92 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.92 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.92 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.92 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.91 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.91 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.91 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.91 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.91 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.91 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.91 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.91 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.91 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.91 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.91 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.91 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.91 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.91 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.91 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.91 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.91 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.91 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.91 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.91 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.91 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.91 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.9 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.9 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.9 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.9 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.9 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.9 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.9 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.9 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.9 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.9 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.9 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.9 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.9 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.9 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.9 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.9 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.9 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.9 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.9 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.9 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.9 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.9 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.9 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.9 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.9 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.9 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.9 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.9 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.9 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.9 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.9 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.9 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.9 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.9 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.9 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.89 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.89 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.89 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.89 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.89 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.89 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.89 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.89 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.89 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.89 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.89 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.89 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.89 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.89 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.89 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.89 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.89 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.89 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.89 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.89 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.89 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.89 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.89 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.89 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.89 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.89 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.89 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.89 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.89 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.89 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.89 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.89 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.89 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.89 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.88 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.88 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.88 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.88 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.88 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.88 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.88 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.88 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.88 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.88 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.88 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.88 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.88 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.88 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.88 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.88 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.88 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.88 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.88 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.88 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.88 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.88 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.88 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.88 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.88 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.88 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.88 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.88 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.88 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.88 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.88 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.88 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.88 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.88 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.88 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.88 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.88 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.88 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.88 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.88 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.88 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.88 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.88 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.87 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.87 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.87 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.87 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.87 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.87 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.87 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.87 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.87 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.87 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.87 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.87 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.87 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.87 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.87 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.87 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.87 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.87 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.87 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.87 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.87 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.87 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.87 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.87 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.87 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.87 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.87 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.87 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.87 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.87 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.87 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.86 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.86 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.86 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.86 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.86 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.86 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.86 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.86 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.86 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.86 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.86 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.86 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.86 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.86 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.86 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.86 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.86 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.86 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.86 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.86 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.86 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.86 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.86 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.86 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.86 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.85 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.85 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.85 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.85 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.85 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.85 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.85 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.85 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.85 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.85 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.85 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.85 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.85 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.85 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.85 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.85 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.85 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.85 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.85 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.85 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.85 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.84 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.84 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.84 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.84 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.84 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.84 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.84 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.84 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.84 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.84 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.84 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.84 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.84 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.84 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.84 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.84 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.84 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.84 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.84 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.83 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.83 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.83 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.83 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.83 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.83 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.83 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.83 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.83 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.83 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.83 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.83 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.82 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.82 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.82 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.82 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.82 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.82 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.82 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.81 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.81 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.81 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.81 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.81 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.81 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.8 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.79 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.79 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.79 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.79 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.79 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.79 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.79 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.79 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.78 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.78 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.78 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.77 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.76 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.76 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.76 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.76 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.76 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.75 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.75 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.75 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.74 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.74 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.74 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.73 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.72 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.69 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.69 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.66 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.66 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.66 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.66 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.65 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.65 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.65 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.63 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.6 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.6 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.6 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.59 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.58 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.57 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.57 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.56 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.56 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.55 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.53 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.52 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.5 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.49 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.43 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.42 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.41 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.41 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.41 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.4 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.4 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.39 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.37 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.34 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.33 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.3 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.29 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.26 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.25 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.23 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.21 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.2 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.19 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.18 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.17 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.17 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.16 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.16 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.11 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.1 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.08 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.08 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.06 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.04 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.04 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.01 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.99 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.95 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.95 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.94 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.93 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.88 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.87 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.84 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.8 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.71 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.7 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.67 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.67 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.59 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.58 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.56 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.54 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 98.5 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.49 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.45 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 98.42 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 98.42 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.38 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.34 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.34 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.33 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.32 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.31 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 98.3 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.27 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.25 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.24 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.22 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.12 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.12 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.09 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=430.27 Aligned_cols=406 Identities=26% Similarity=0.424 Sum_probs=252.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCC----------
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN---------- 140 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~---------- 140 (521)
+++.|++++|.+.+.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++.+|..+..
T Consensus 381 ~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 460 (968)
T PLN00113 381 NLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLA 460 (968)
T ss_pred CCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECc
Confidence 4555555555555555555555555555555555555555555555555555555555554444443333
Q ss_pred -------------CcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-
Q 009972 141 -------------LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG- 206 (521)
Q Consensus 141 -------------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~- 206 (521)
+++|+.|+|++|++++.+|..|.++++|++|+|++|++++.+|..... ..++..+++++|.+++
T Consensus 461 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~~~ 538 (968)
T PLN00113 461 RNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSS--CKKLVSLDLSHNQLSGQ 538 (968)
T ss_pred CceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcC--ccCCCEEECCCCccccc
Confidence 355666777777777777777777888888888888888777764322 2467788888888875
Q ss_pred ----cccCCCCCEEeccCCccccCCccccc---cCCCcccCCCccCCCCCccc------------cccCCCCCCCCCCCC
Q 009972 207 ----LCHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKDPKQR------------ATTLCGGAPPARTRA 267 (521)
Q Consensus 207 ----~~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~~~~~~~------------~~~~c~~~~~~~~~~ 267 (521)
+..+++|+.|||++|+++|.+|..+. .|..+++++|.+.+..|... ....|++.++.
T Consensus 539 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~---- 614 (968)
T PLN00113 539 IPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTS---- 614 (968)
T ss_pred CChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCcccc----
Confidence 45678899999999999999987764 45667888888876554311 11234321100
Q ss_pred CCCCCcccccccccCCCCCCccceeeeeeeechhhHHHHHhhheeeEeeecCCCccccccCCCCCcccccccchhhhccc
Q 009972 268 GLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDSEILKDV 347 (521)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~iv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (521)
+ .+.+ .... +...+.+++.++.++++++++++++++++++++.++ . ..... ...............
T Consensus 615 ~-----~~~c---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~---~~~~~~~~~~~~~~~ 680 (968)
T PLN00113 615 G-----LPPC---KRVR-KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLE-L-KRVEN---EDGTWELQFFDSKVS 680 (968)
T ss_pred C-----CCCC---cccc-ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccc-c-ccccc---ccccccccccccccc
Confidence 0 0000 0011 111222222222222222222222222222222111 0 00000 000000000000011
Q ss_pred cccCHHHHHHHHhhhhhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeE
Q 009972 348 VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426 (521)
Q Consensus 348 ~~~~~~~l~~~~~~f~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 426 (521)
..++++++..... ..++||+|+||.||+|+.. ++..||||++..... ...+|++.+++++|||||+++|+
T Consensus 681 ~~~~~~~~~~~~~-~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~l~~l~HpnIv~~~~~ 751 (968)
T PLN00113 681 KSITINDILSSLK-EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--------IPSSEIADMGKLQHPNIVKLIGL 751 (968)
T ss_pred hhhhHHHHHhhCC-cccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--------ccHHHHHHHhhCCCCCcceEEEE
Confidence 2345555544321 2378999999999999985 789999998742211 12356889999999999999999
Q ss_pred eecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeee
Q 009972 427 CRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKV 506 (521)
Q Consensus 427 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl 506 (521)
|.+.+ ..++||||+++|+|.++++ .++|.++.+|+.|+|+||+|||+.+.++|+||||||+||++|+++.+++
T Consensus 752 ~~~~~--~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~ 824 (968)
T PLN00113 752 CRSEK--GAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824 (968)
T ss_pred EEcCC--CCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE
Confidence 98876 7899999999999999995 2899999999999999999999887889999999999999999998887
Q ss_pred CCCchhh
Q 009972 507 SPLCLSF 513 (521)
Q Consensus 507 ~DfGla~ 513 (521)
. ||.+.
T Consensus 825 ~-~~~~~ 830 (968)
T PLN00113 825 R-LSLPG 830 (968)
T ss_pred E-ecccc
Confidence 5 56544
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-40 Score=328.34 Aligned_cols=166 Identities=40% Similarity=0.634 Sum_probs=149.2
Q ss_pred cccccCHHHHHHHHhhhh--hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCcccee
Q 009972 346 DVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423 (521)
Q Consensus 346 ~~~~~~~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 423 (521)
....|++.|+.++|++|+ ++||+|+||.||+|.+++|..||||++.....+ . .++|.+|++++++++|||+|+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~---~-~~eF~~Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ---G-EREFLNEVEILSRLRHPNLVKL 136 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc---c-hhHHHHHHHHHhcCCCcCcccE
Confidence 356799999999999998 899999999999999999999999987443221 1 4569999999999999999999
Q ss_pred eeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 009972 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 424 ~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~ 503 (521)
+|||.+.+. +.+||||||++|+|+++|+.....+++|.+|++||.++|+||+|||+.|.|+||||||||+|||||++++
T Consensus 137 lGyC~e~~~-~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 137 LGYCLEGGE-HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred EEEEecCCc-eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 999998762 3899999999999999998654337999999999999999999999999999999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009972 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+|+...
T Consensus 216 aKlsDFGLa~~~~ 228 (361)
T KOG1187|consen 216 AKLSDFGLAKLGP 228 (361)
T ss_pred EEccCccCcccCC
Confidence 9999999998764
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=258.28 Aligned_cols=146 Identities=22% Similarity=0.336 Sum_probs=130.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||+||+|+++ ++.+||||.+..+.. .....+....|+++|+.++|||||++++++++++ ..+||||||
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l--~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~--~i~lVMEyC 91 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL--NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD--FIYLVMEYC 91 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhcc--CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC--eEEEEEEeC
Confidence 56999999999999997 689999999965542 2345567889999999999999999999999988 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC------CCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED------FSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~------~~~kl~DfGla~~~~ 516 (521)
.+|+|.+|++.++ .+++.+...++.|+|.||++||++ +||||||||.||||+.. -.+||+|||+||.+.
T Consensus 92 ~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 92 NGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 9999999998665 499999999999999999999999 99999999999999764 468999999999987
Q ss_pred cc
Q 009972 517 SS 518 (521)
Q Consensus 517 ~~ 518 (521)
+.
T Consensus 167 ~~ 168 (429)
T KOG0595|consen 167 PG 168 (429)
T ss_pred ch
Confidence 64
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=260.50 Aligned_cols=148 Identities=27% Similarity=0.409 Sum_probs=130.4
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.+|+|+||+||+|.+++...||||++...... ....++|.+|+.+|.+++|||||+++|+|.+... ..++|||||+
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~--~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~iVtEy~~ 123 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFD--DESRKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLCIVTEYMP 123 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcC--hHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceEEEEEeCC
Confidence 569999999999999987666999998554322 2226789999999999999999999999987642 4899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-eeecCCCCCCeeecCCC-CeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP-FTISELNSSAVYLTEDF-SPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivH~dlk~~NILld~~~-~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......++|..+++||.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++....
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 99999999864445799999999999999999999998 6 99999999999999998 999999999987664
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=259.34 Aligned_cols=149 Identities=23% Similarity=0.358 Sum_probs=134.8
Q ss_pred hhhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.+.||+|.||.||.|.+++...||+|.+..+.. ..++|.+|+.+|.+++|+|||+++|+|..+. ..+|||||
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~--piyIVtE~ 282 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-----SPEAFLREAQIMKKLRHEKLVKLYGVCTKQE--PIYIVTEY 282 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEecccc-----ChhHHHHHHHHHHhCcccCeEEEEEEEecCC--ceEEEEEe
Confidence 4478999999999999999888999999865432 2457999999999999999999999999876 68999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSII 520 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~~~ 520 (521)
|++|+|.++|+...+..+.-.+.+.++.|||+||+||+++ .+|||||.++|||++++..+||+||||||...+..+
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 9999999999875666789999999999999999999999 999999999999999999999999999997766554
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=254.50 Aligned_cols=148 Identities=20% Similarity=0.238 Sum_probs=129.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|.||.||||+.. +|+.||+|++...... .....-..+||.+|+++.|||||+|.+...+......|||+|||
T Consensus 123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~--~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYM 200 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK--EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYM 200 (560)
T ss_pred HHhcCcchhheeEeeecccCcEEEEEEeecccCC--CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecc
Confidence 68999999999999885 7999999999654422 23344568999999999999999999998876333799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
++ ||..++.. ..-.++..++..++.|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||||+++...
T Consensus 201 dh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 201 DH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred cc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 99 99998863 334599999999999999999999999 9999999999999999999999999999987653
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-30 Score=243.58 Aligned_cols=155 Identities=22% Similarity=0.261 Sum_probs=136.6
Q ss_pred cCHHHHHHHHhhhhhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEee
Q 009972 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428 (521)
Q Consensus 350 ~~~~~l~~~~~~f~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 428 (521)
++..|+++. +.||+|..|+|||++++ +++.+|+|.+.. ..+...++++.+|++++.+.+||+||.++|.|.
T Consensus 76 i~~~dle~~-----~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~---~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 76 ISLSDLERL-----GVLGSGNGGTVYKVRHKPTGKIYALKVILL---NIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred cCHHHhhhh-----hhcccCCCcEEEEEEEcCCCeEEEEEeecc---cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 566777765 68999999999999997 688899999832 334566788999999999999999999999998
Q ss_pred cCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeeeC
Q 009972 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~~~kl~ 507 (521)
.+.. +..++||||++|+|++++...+ .+++...-+|+.+|.+||.|||+ . +||||||||+|||+...|++|||
T Consensus 148 ~~~~-~isI~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKic 221 (364)
T KOG0581|consen 148 SNGE-EISICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKIC 221 (364)
T ss_pred eCCc-eEEeehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEec
Confidence 8763 4999999999999999996443 48999999999999999999996 5 99999999999999999999999
Q ss_pred CCchhhhcccc
Q 009972 508 PLCLSFLLVSS 518 (521)
Q Consensus 508 DfGla~~~~~~ 518 (521)
|||.++.+.++
T Consensus 222 DFGVS~~lvnS 232 (364)
T KOG0581|consen 222 DFGVSGILVNS 232 (364)
T ss_pred cccccHHhhhh
Confidence 99999987654
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=241.32 Aligned_cols=148 Identities=16% Similarity=0.259 Sum_probs=126.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc-ch--hhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW-TG--YLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.+|+|+||.|-+|..+ +|+.||||++....... .. .......+|+++|++++|||||++.+++..++ +.||||
T Consensus 178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d--s~YmVl 255 (475)
T KOG0615|consen 178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD--SSYMVL 255 (475)
T ss_pred eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC--ceEEEE
Confidence 78999999999999886 79999999996443211 11 11234579999999999999999999999887 889999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~---~~~kl~DfGla~~~~ 516 (521)
|||++|+|.+++-..+. +.+..-..++.|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||+||+..
T Consensus 256 E~v~GGeLfd~vv~nk~--l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 256 EYVEGGELFDKVVANKY--LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred EEecCccHHHHHHhccc--cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 99999999999975543 77778899999999999999999 99999999999999655 789999999999986
Q ss_pred cc
Q 009972 517 SS 518 (521)
Q Consensus 517 ~~ 518 (521)
..
T Consensus 331 ~~ 332 (475)
T KOG0615|consen 331 EG 332 (475)
T ss_pred cc
Confidence 43
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=229.96 Aligned_cols=144 Identities=19% Similarity=0.241 Sum_probs=125.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.++|+|+||.||||+.+ +|+.||||++....+ ++...+-.+||+++|+.++|+|+|.|+..|.... ..+||+||+
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed--d~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr--klhLVFE~~ 83 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED--DPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR--KLHLVFEYC 83 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCc--cHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc--eeEEEeeec
Confidence 47999999999999998 699999999954332 3455667899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++--|.++-+ ....++.....+|..|+++|+.|+|.. +||||||||+|||++.++.+||||||+||.+.
T Consensus 84 dhTvL~eLe~--~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~ 152 (396)
T KOG0593|consen 84 DHTVLHELER--YPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLS 152 (396)
T ss_pred chHHHHHHHh--ccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhc
Confidence 9844444332 223488999999999999999999999 99999999999999999999999999999987
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=222.50 Aligned_cols=145 Identities=19% Similarity=0.244 Sum_probs=129.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+++|+|.||.||+|+.. +|+.||+|++..... .........|||+.|+.++|+||+.+++.+-..+ ..-||+|||
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~--kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~--~l~lVfEfm 83 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA--KDGINRTALREIKLLQELKHPNIIELIDVFPHKS--NLSLVFEFM 83 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEEEEEeecccc--ccCccHHHHHHHHHHHHccCcchhhhhhhccCCC--ceEEEEEec
Confidence 68999999999999985 799999999976542 2233456789999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+. +|+..++.+. ..++..+...++.++.+|++|+|+. .|+||||||.|+|++++|.+||+|||+||.+.+
T Consensus 84 ~t-dLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 84 PT-DLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred cc-cHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 98 9999997543 4789999999999999999999999 999999999999999999999999999998864
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=230.76 Aligned_cols=148 Identities=20% Similarity=0.180 Sum_probs=130.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.|++|+||.||||+.+ +++.||+|+++...+. ....-.-.|||.+|.+++|||||.+-.+....+.+..|+|||||
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek--~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~ 159 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK--EGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYV 159 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeeccccccc--CCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHH
Confidence 78999999999999997 6889999999655421 12223458999999999999999999998877666899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
++ +|..+++... +++...+...++.|+.+|++|||+. .|+||||||+|+|+.++|.+||+|||+||.+.+.
T Consensus 160 Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 160 EH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred Hh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 99 9999997443 5799999999999999999999999 9999999999999999999999999999988765
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-28 Score=245.98 Aligned_cols=145 Identities=20% Similarity=0.254 Sum_probs=132.4
Q ss_pred hhhCcCCCeeEEEEEe-CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+|+.+|+++. .+|..||+|++..+.. .....++...+||++.+.++|||||++++||++.+ ..|||.|+|
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l-~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~--nVYivLELC 100 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL-KKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN--NVYIVLELC 100 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHh-cCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC--ceEEEEEec
Confidence 7899999999999999 7899999999965432 23345677899999999999999999999999988 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++ .+.++++++...+..||+.||.|||+. +|+|||||..|++|++++++||+|||||..+.
T Consensus 101 ~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 101 HRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred CCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeec
Confidence 9999999986 344699999999999999999999999 99999999999999999999999999999876
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=252.74 Aligned_cols=161 Identities=24% Similarity=0.335 Sum_probs=141.5
Q ss_pred cccCHHHHHHHHhhhh-----------hhhCcCCCeeEEEEEeC-C---CCEEEEEEeeeeccccchhhHHHHHHHHHHH
Q 009972 348 VRFSRQELEVACEDFS-----------NIIGSSPDSLVYKGTMK-G---GPEIAVISLCIKEEHWTGYLELYFQREVADL 412 (521)
Q Consensus 348 ~~~~~~~l~~~~~~f~-----------~~lg~G~~g~Vy~~~~~-~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l 412 (521)
.+++|+|--.+...|. ++||.|.||+||+|+++ . ...||||.++... .+..+.+|..|..||
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy---tekqrrdFL~EAsIM 684 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY---TEKQRRDFLSEASIM 684 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc---cHHHHhhhhhhhhhc
Confidence 3567777766666663 68999999999999996 2 3579999986543 335567899999999
Q ss_pred hccCCCccceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 009972 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (521)
Q Consensus 413 ~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk 492 (521)
++++||||++|.|...... ..+||+|||+||+|+.+|+.+.+ .++|.+...+.++||.||.||-+. +.|||||.
T Consensus 685 GQFdHPNIIrLEGVVTks~--PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLA 758 (996)
T KOG0196|consen 685 GQFDHPNIIRLEGVVTKSK--PVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLA 758 (996)
T ss_pred ccCCCCcEEEEEEEEecCc--eeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhh
Confidence 9999999999999998877 68999999999999999986654 499999999999999999999999 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhccc
Q 009972 493 SSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 493 ~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|||++.+..+||+||||+|++.+
T Consensus 759 ARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 759 ARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred hhheeeccceEEEeccccceeeccc
Confidence 9999999999999999999999864
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=230.17 Aligned_cols=147 Identities=24% Similarity=0.252 Sum_probs=130.4
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. ++||+|+||+||.++.+ +++.+|+|.+.++. .......+...+|..+|.+++||.||++.--+++.+ ..|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~-iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~--kLy 101 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK-IVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE--KLY 101 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhH-hhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC--eEE
Confidence 4555 89999999999999887 68899999986543 223345667899999999999999999999998877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+|+||+.+|.|..+|.++. .+++....-++.+|+.||.|||+. +||||||||+|||||++|+++|+||||++.
T Consensus 102 lVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~ 174 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKE 174 (357)
T ss_pred EEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchh
Confidence 9999999999999997544 489998999999999999999999 999999999999999999999999999994
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=225.01 Aligned_cols=152 Identities=17% Similarity=0.176 Sum_probs=131.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|.||+|||+... +|..+|.|.+. ....+...++++..|+.+|+.++|||||+++++-...+..-.+|||||+
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~--f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c 102 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQ--FGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELC 102 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcc--hhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhh
Confidence 78999999999999875 89999999985 3445567788999999999999999999999954333221389999999
Q ss_pred CCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
..|+|...++. ++.+.+++.+++++..|++.||..+|+. .|+ |+||||||.||+||.+|.+|++||||+|++.+.
T Consensus 103 ~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~ 181 (375)
T KOG0591|consen 103 DAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK 181 (375)
T ss_pred cccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhHhHhcch
Confidence 99999999972 3456789999999999999999999993 335 999999999999999999999999999998764
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=238.54 Aligned_cols=145 Identities=23% Similarity=0.297 Sum_probs=130.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||.|+||.||+|+-. +|..||||+++.+-..|.+.. =.||+..|+++. |||||++...+.+.+. ..++||||
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~---nLREvksL~kln~hpniikL~Evi~d~~~-~L~fVfE~ 91 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECM---NLREVKSLRKLNPHPNIIKLKEVIRDNDR-ILYFVFEF 91 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHH---HHHHHHHHHhcCCCCcchhhHHHhhccCc-eEeeeHHh
Confidence 78999999999999886 688999999977666554332 378999999998 9999999999987654 79999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+. +|+++++++ .+.+++.++..|+.||.+||+|+|.+ |+.|||+||+|||+.....+||+|||+||-+.+
T Consensus 92 Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 92 MDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred hhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccccc
Confidence 987 999999866 66899999999999999999999999 999999999999999999999999999997654
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-27 Score=248.35 Aligned_cols=148 Identities=29% Similarity=0.402 Sum_probs=129.3
Q ss_pred hhhhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCce
Q 009972 362 FSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 435 (521)
|-+.||+|.||+||+|+..+ ...||||.++.+. +.+.+++|++|+++++.++|||||+|+|.|..++ ..
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a---~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~--P~ 564 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA---ENQARQDFRREAELLAELQHPNIVRLLGVCREGD--PL 564 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc---cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC--ee
Confidence 34789999999999998743 3579999985432 2346789999999999999999999999999888 78
Q ss_pred EEEEeeCCCCChhhhhhcC--------C----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 009972 436 MLVFDYASNGTLYEHLHYG--------E----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~--------~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~ 503 (521)
++|+|||.+|||.++|+-. . ..+|+..+.+.||.|||.||+||-++ .+|||||.++|+|+.+++.
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceE
Confidence 9999999999999999721 1 22389999999999999999999999 9999999999999999999
Q ss_pred eeeCCCchhhhccc
Q 009972 504 PKVSPLCLSFLLVS 517 (521)
Q Consensus 504 ~kl~DfGla~~~~~ 517 (521)
+||+||||+|-+-+
T Consensus 642 VKIsDfGLsRdiYs 655 (774)
T KOG1026|consen 642 VKISDFGLSRDIYS 655 (774)
T ss_pred EEecccccchhhhh
Confidence 99999999996543
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-27 Score=227.89 Aligned_cols=147 Identities=19% Similarity=0.259 Sum_probs=131.8
Q ss_pred hhhhCcCCCeeEEEEEe-CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 363 SNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|.||+|-++.. ..|+.||||.+... ...+.+..-.+++||++|..++||||++++.+|++.+ ...|||||
T Consensus 58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKd-kIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd--KIvivMEY 134 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKD-KIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD--KIVIVMEY 134 (668)
T ss_pred HHHhcCCcccceeehhhccCCcEeehhhhhhh-hcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc--eEEEEEEe
Confidence 37899999999999987 47999999998433 3333445567899999999999999999999999877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
..+|.|++|+.+++ .|++.....+++||..|+.|+|.+ +++|||||.+|||||+++++||+||||+.++.+
T Consensus 135 aS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 135 ASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred cCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999997655 499999999999999999999999 999999999999999999999999999988764
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=236.20 Aligned_cols=149 Identities=23% Similarity=0.264 Sum_probs=131.7
Q ss_pred hhhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEE
Q 009972 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
|.+.||+|+|++||+|+.. +++++|||++.++. .......+.+.+|-.+|.+| .||.|++|+-.|.++. ..|.|+
T Consensus 77 Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~-Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~--sLYFvL 153 (604)
T KOG0592|consen 77 FGKILGEGSYSTVVLAREKATGKEYAIKVLDKRY-IIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE--SLYFVL 153 (604)
T ss_pred hhheeccccceeEEEeeecCCCceeeHhhhhHHH-HHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc--ceEEEE
Confidence 3589999999999999986 68999999985443 22233345678899999999 9999999999999887 899999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
||+++|+|.++|++-+ .+++.....+|.+|..||+|||+. |||||||||+|||||+||++||+|||-|+.+.+.
T Consensus 154 e~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 154 EYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999999998554 489999999999999999999999 9999999999999999999999999999998764
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-27 Score=240.22 Aligned_cols=140 Identities=29% Similarity=0.484 Sum_probs=126.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||||++.+ .||||.+...... ....+.|++|+.++++-||.||+-++|||..+. ..||+.||+
T Consensus 398 ~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt--~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~---~AIiTqwCe 470 (678)
T KOG0193|consen 398 ERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPT--PEQLQAFKNEVAVLKKTRHENILLFMGACMNPP---LAIITQWCE 470 (678)
T ss_pred ceeccccccceeeccccc--ceEEEEEecCCCC--HHHHHHHHHHHHHHhhcchhhheeeehhhcCCc---eeeeehhcc
Confidence 789999999999999976 3999999776533 335678999999999999999999999999875 499999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+-+|+.++|-.. ..++..+.+.||+|||+||.|||.+ +|||||||+.||++++++++||+||||+..
T Consensus 471 GsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 471 GSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred Cchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceee
Confidence 999999998443 4589999999999999999999999 999999999999999999999999999875
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=263.72 Aligned_cols=219 Identities=34% Similarity=0.607 Sum_probs=148.6
Q ss_pred CChhHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCCccceeeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCC
Q 009972 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHG 103 (521)
Q Consensus 24 ~~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 103 (521)
..++|..+|++||+++. +|...+.+|+. ..+||.|.||+|+. .++|+.|+|++|+++|.+++.+..+++|+.|+|++
T Consensus 26 ~~~~~~~~l~~~~~~~~-~~~~~~~~w~~-~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~ 102 (968)
T PLN00113 26 LHAEELELLLSFKSSIN-DPLKYLSNWNS-SADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSN 102 (968)
T ss_pred CCHHHHHHHHHHHHhCC-CCcccCCCCCC-CCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCC
Confidence 46689999999999995 67777899975 45799999999985 56899999999999999999999999999999999
Q ss_pred CcccccCCcccC-CCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccC
Q 009972 104 NNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAV 182 (521)
Q Consensus 104 N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 182 (521)
|++++.+|..+. .+++|++|+|++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+++.+
T Consensus 103 n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 180 (968)
T PLN00113 103 NQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKI 180 (968)
T ss_pred CccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccC
Confidence 999988887654 777777777777777665553 23455555555555555555555555555555555555554444
Q ss_pred CCCCCC----------------------cccccccccccccCCCCC-----cccCCCCCEEeccCCccccCCccccc---
Q 009972 183 PAGSNS----------------------GYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLE--- 232 (521)
Q Consensus 183 p~~~~~----------------------~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~l~--- 232 (521)
|..... ....+++.++++.|.+++ +..+++|++|++++|++++.+|..+.
T Consensus 181 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 260 (968)
T PLN00113 181 PNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260 (968)
T ss_pred ChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCC
Confidence 432111 001344555555555543 34456666666666666666665543
Q ss_pred cCCCcccCCCccCCC
Q 009972 233 YLPSTSFQGNCLQNK 247 (521)
Q Consensus 233 ~l~~l~~~~N~l~~~ 247 (521)
+|+.+++++|.+.+.
T Consensus 261 ~L~~L~L~~n~l~~~ 275 (968)
T PLN00113 261 NLQYLFLYQNKLSGP 275 (968)
T ss_pred CCCEEECcCCeeecc
Confidence 344556666655543
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-27 Score=217.31 Aligned_cols=148 Identities=18% Similarity=0.166 Sum_probs=131.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||.|+||.|..++.+ +|..+|+|.+....- ..-...+...+|..+|+.++||.++++.+-|.+.+ ..+|||||+
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v-VklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~--~lymvmeyv 126 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV-VKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS--NLYMVMEYV 126 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHHHH-HHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC--eEEEEEecc
Confidence 67999999999999997 688999999854431 12223456889999999999999999999999887 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSI 519 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~~ 519 (521)
++|.|..+++..+ .++++...-+|.+|+.||+|||+. .|++|||||+|||||.+|.+||+|||+||.+.+..
T Consensus 127 ~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 127 PGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred CCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 9999999997544 499999999999999999999999 99999999999999999999999999999877654
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-27 Score=229.12 Aligned_cols=145 Identities=25% Similarity=0.376 Sum_probs=124.6
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHh--ccCCCccceeeeEeecCC--CCceEEE
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA--RINHENTGKLLGYCRESS--PFTRMLV 438 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~--~l~H~niv~l~g~~~~~~--~~~~~lv 438 (521)
.++||+|+||.||||.+.+ +.||||++.. +..+.|.+|-++.. .++|+||++++++-.... ..+.+||
T Consensus 215 ~eli~~Grfg~V~KaqL~~-~~VAVKifp~-------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLDN-RLVAVKIFPE-------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred HHHhhcCccceeehhhccC-ceeEEEecCH-------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 3789999999999999966 8899999843 23457888887765 569999999999865332 3378999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC------CCCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE------LGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
+||.++|+|.+||... ..+|....+|+..+++||+|||+. .+|+|+|||||++|||+..|+++.|+|||||
T Consensus 287 t~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 9999999999999743 489999999999999999999976 3589999999999999999999999999999
Q ss_pred hhcccc
Q 009972 513 FLLVSS 518 (521)
Q Consensus 513 ~~~~~~ 518 (521)
..+.++
T Consensus 364 l~~~p~ 369 (534)
T KOG3653|consen 364 LRLEPG 369 (534)
T ss_pred EEecCC
Confidence 987653
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-27 Score=214.25 Aligned_cols=144 Identities=22% Similarity=0.283 Sum_probs=130.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|.||.||.|+.+ ++-.||+|++.+. +......++++.+|+++-++++||||+++++|+.+.. ..||++||.
T Consensus 28 r~LgkgkFG~vYlarekks~~IvalKVlfKs-qi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~--riyLilEya 104 (281)
T KOG0580|consen 28 RPLGKGKFGNVYLAREKKSLFIVALKVLFKS-QILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK--RIYLILEYA 104 (281)
T ss_pred ccccCCccccEeEeeeccCCcEEEEeeeeHH-HHHHhcchhhhhheeEeecccCCccHHhhhhheeccc--eeEEEEEec
Confidence 78999999999999997 6778999998443 3334556788999999999999999999999999988 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
+.|+++..|+......+++.....++.|+|.||.|+|.. +|+||||||+|+|++.++..||+|||-+-
T Consensus 105 ~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV 172 (281)
T KOG0580|consen 105 PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSV 172 (281)
T ss_pred CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCcee
Confidence 999999999866656689999999999999999999998 99999999999999999999999999654
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-26 Score=217.85 Aligned_cols=147 Identities=19% Similarity=0.227 Sum_probs=127.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCc-cceeeeEeecCCC----CceEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN-TGKLLGYCRESSP----FTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~----~~~~l 437 (521)
++||+|+||+||+|+.+ +|+.||+|++....++ +.......+|+.++.+++|+| ||+|++++.+.+. ...++
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~l 94 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYL 94 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEE
Confidence 67999999999999987 7899999999765442 234456789999999999999 9999999987551 25789
Q ss_pred EEeeCCCCChhhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 438 VFDYASNGTLYEHLHYGER--CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|+||++. +|..++..... ..++-..+..++.|+.+||+|||++ +|+||||||.|||++++|.+||+|||+|+.+
T Consensus 95 vfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 95 VFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred EEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHHh
Confidence 9999987 99999974432 3577789999999999999999999 9999999999999999999999999999965
Q ss_pred c
Q 009972 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 171 ~ 171 (323)
T KOG0594|consen 171 S 171 (323)
T ss_pred c
Confidence 4
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=235.04 Aligned_cols=145 Identities=22% Similarity=0.288 Sum_probs=127.7
Q ss_pred hhhCcCCCeeEEEEEeCC--C--CE-EEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG--G--PE-IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~--~--~~-vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
++||+|+||.||+|+++. + .. ||||....+ .........+|++|.++|+.++|||||+++|++.... ..++|
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~-~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~--Pl~iv 239 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGS-SELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE--PLMLV 239 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeeccc-ccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--ccEEE
Confidence 799999999999999863 2 23 888887532 2233455678999999999999999999999999887 68999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
||+|++|+|.++|+.... .++..++++++.++|.||+|||+. +++||||.++|+|++.++.+||+|||+++.-
T Consensus 240 mEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 999999999999985543 599999999999999999999999 9999999999999999999999999998864
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-27 Score=224.55 Aligned_cols=143 Identities=21% Similarity=0.320 Sum_probs=121.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCC---ceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~lv~ 439 (521)
+++|+|+||.||+|+.. +++.||||++...... --+|+.+|++++|||||+|.-+|....+. ...+||
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~--------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY--------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCCCc--------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 78999999999999996 5789999998544322 24699999999999999999988654432 456899
Q ss_pred eeCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~-~~~kl~DfGla~~~~ 516 (521)
||||. +|.++++. .....++...+.-++.|+.+||+|||+. +|+||||||.|+|+|.+ |.+||||||-||.+.
T Consensus 102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 99998 99999973 1234577788889999999999999998 99999999999999976 999999999999886
Q ss_pred cc
Q 009972 517 SS 518 (521)
Q Consensus 517 ~~ 518 (521)
..
T Consensus 178 ~~ 179 (364)
T KOG0658|consen 178 KG 179 (364)
T ss_pred cC
Confidence 53
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=231.32 Aligned_cols=148 Identities=26% Similarity=0.329 Sum_probs=131.2
Q ss_pred hhhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
|.++||+|.||.|..|...++..||||++... .....+.+|.+|+++|.+++|||||+++|.|..++ ..++|+||
T Consensus 542 ~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~---a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De--PicmI~EY 616 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVEGPLKVAVKILRPD---ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD--PLCMITEY 616 (807)
T ss_pred hhhhhcCcccceeEEEEecCceEEEEeecCcc---cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC--chHHHHHH
Confidence 45899999999999999998899999998543 33456789999999999999999999999999888 78999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|++|+|.+++........+-...++|+.|||.||+||.+. .+||||+.++|+|+|.++++||+|||++|-+-+
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccccccc
Confidence 9999999999865433345666788999999999999998 999999999999999999999999999995543
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-26 Score=220.06 Aligned_cols=146 Identities=21% Similarity=0.287 Sum_probs=127.2
Q ss_pred hhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|+||.||++... +|...|||.+...... ..+.+.+|+.+|.+++|||||+.+|..........++.|||
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~----~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP----TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeecccch----hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 378999999999999997 4889999998544211 14568999999999999999999997554431248999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++...+. .+++..+.+++++|++||+|||++ +||||||||+|||++. ++.+||+|||+++...
T Consensus 98 ~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred cCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 999999999986554 699999999999999999999999 9999999999999999 7999999999999776
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-26 Score=221.20 Aligned_cols=146 Identities=24% Similarity=0.227 Sum_probs=124.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccc------h----hhHHHHHHHHHHHhccCCCccceeeeEeecCCC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT------G----YLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~------~----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
..||+|.||.|-+|+.. +++.||||++.++..... . ...+.+.+||.+|++++|||||+|+.+..+...
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s 182 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPES 182 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCccc
Confidence 67999999999999987 789999999965541110 0 012478999999999999999999999988776
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCch
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQ-VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGl 511 (521)
...|||+|||..|.+...= ...+ ++..+..+|.+++..||+|||.+ +||||||||+|+||+++|++||+|||.
T Consensus 183 ~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VKIsDFGV 256 (576)
T KOG0585|consen 183 DKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVKISDFGV 256 (576)
T ss_pred CceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEEeeccce
Confidence 6899999999998876432 2223 89999999999999999999999 999999999999999999999999998
Q ss_pred hhhc
Q 009972 512 SFLL 515 (521)
Q Consensus 512 a~~~ 515 (521)
+-..
T Consensus 257 s~~~ 260 (576)
T KOG0585|consen 257 SNEF 260 (576)
T ss_pred eeec
Confidence 8755
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-26 Score=227.97 Aligned_cols=144 Identities=19% Similarity=0.234 Sum_probs=129.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|.||.||||+-+ +.+.||+|.+.+... .....+...+|++++++++|||||.++++|++.. +.++|+||+
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~--~~~vVte~a 83 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKNLRQEVRILRSLKHPNIVEMLESFETSA--HLWVVTEYA 83 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc--eEEEEehhh
Confidence 78999999999999987 578899998854332 2345567999999999999999999999999988 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
.+ +|+.+|.... .+++.....|+.++..||.|||+. +|+|||+||.|||++..+++|++|||+||.+..
T Consensus 84 ~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 84 VG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred hh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 87 9999996444 499999999999999999999999 999999999999999999999999999998754
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=225.01 Aligned_cols=145 Identities=20% Similarity=0.267 Sum_probs=126.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|.||+||.|+.. ++..||+|.+..+... ......+.+.+|+.++++++ ||||++++.++.... ..++|||
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~--~~~ivmE 100 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT--KIYIVME 100 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC--eEEEEEE
Confidence 78999999999999886 7899999965432111 11123456778999999998 999999999999888 7999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeeeCCCchhhhc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~-~~~kl~DfGla~~~ 515 (521)
|+.+|+|.+++... ..+.+....+++.|++.|++|+|+. +|+||||||+|||+|.+ +++||+|||++...
T Consensus 101 y~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 101 YCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred ecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 99999999999863 3588999999999999999999999 99999999999999999 99999999999987
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=222.44 Aligned_cols=150 Identities=17% Similarity=0.125 Sum_probs=131.2
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCce
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 435 (521)
.++|+ .+||+|+||.||.|+-+ +|..+|+|++.+.... .....+.++.|-.+|...++|+||+|+-.|.+.+ ..
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~-~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~--~L 216 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEML-KKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE--YL 216 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHH-hhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC--ee
Confidence 34555 78999999999999887 6899999999654422 2334567889999999999999999999999887 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
||||||+++|++..+|.... .|++.....++.+.+-|++-+|.. ++|||||||+|+|||..|++||+||||++-+
T Consensus 217 YLiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 99999999999999997544 588888899999999999999999 9999999999999999999999999999765
Q ss_pred c
Q 009972 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 292 ~ 292 (550)
T KOG0605|consen 292 D 292 (550)
T ss_pred h
Confidence 4
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-25 Score=220.09 Aligned_cols=144 Identities=20% Similarity=0.104 Sum_probs=125.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+++.+ +|+.||+|.+..... ........+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~e~~ 77 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI-IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD--RLCFVMEYA 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC--EEEEEEeCC
Confidence 36899999999999986 688999999854321 12223456789999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~ 145 (323)
T cd05571 78 NGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence 9999999986433 589999999999999999999999 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.7e-25 Score=222.11 Aligned_cols=145 Identities=20% Similarity=0.280 Sum_probs=122.7
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|... ++..||+|++.... .....+.+.+|+.++.++ +||||++++++|...+. ..+
T Consensus 13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~-~~~ 88 (338)
T cd05102 13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA---TASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG-PLM 88 (338)
T ss_pred eEeccCCcceEEEEEEeccCCcccchhhheecccccc---chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC-ceE
Confidence 78999999999999752 35679999885322 122345789999999999 89999999999876542 578
Q ss_pred EEEeeCCCCChhhhhhcCC------------------------------------------------------------C
Q 009972 437 LVFDYASNGTLYEHLHYGE------------------------------------------------------------R 456 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~------------------------------------------------------------~ 456 (521)
+||||+++|+|.+++.... .
T Consensus 89 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (338)
T cd05102 89 VIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWK 168 (338)
T ss_pred EEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccccc
Confidence 9999999999999986421 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 457 ~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
.++++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 169 ~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~ 224 (338)
T cd05102 169 SPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI 224 (338)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeeccccccc
Confidence 3488999999999999999999998 9999999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-25 Score=241.39 Aligned_cols=150 Identities=22% Similarity=0.369 Sum_probs=129.9
Q ss_pred HhhhhhhhCcCCCeeEEEEEeCC--CC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC
Q 009972 359 CEDFSNIIGSSPDSLVYKGTMKG--GP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 359 ~~~f~~~lg~G~~g~Vy~~~~~~--~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
.-.+...||+|+||.||+|.+.+ |. .||+|.+... .+.+...+|.+|..+|++++|||||+++|+|.+..
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~---~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~- 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL---SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG- 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc---CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC-
Confidence 33345789999999999999864 43 4888887432 23456678999999999999999999999999866
Q ss_pred CceEEEEeeCCCCChhhhhhcC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeC
Q 009972 433 FTRMLVFDYASNGTLYEHLHYG-----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~ 507 (521)
..+|++|||++|+|..+|++. +...++..+.+.|+.|||+|+.||+++ ++|||||.++|+||++...|||+
T Consensus 769 -~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 769 -PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred -CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 789999999999999999854 134689999999999999999999999 99999999999999999999999
Q ss_pred CCchhhhcc
Q 009972 508 PLCLSFLLV 516 (521)
Q Consensus 508 DfGla~~~~ 516 (521)
||||||-+-
T Consensus 845 DFGlArDiy 853 (1025)
T KOG1095|consen 845 DFGLARDIY 853 (1025)
T ss_pred ccchhHhhh
Confidence 999999443
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.7e-25 Score=223.85 Aligned_cols=145 Identities=14% Similarity=0.075 Sum_probs=127.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+++.. +++.||+|++..... ........+.+|+.++.+++||||+++++.+.+.. ..++||||+
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~--~~~lv~E~~ 83 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM-LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL--NLYLIMEFL 83 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--eEEEEEcCC
Confidence 78999999999999886 688999999854321 11223456889999999999999999999998877 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 84 ~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 84 PGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 9999999997443 589999999999999999999999 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.5e-25 Score=215.09 Aligned_cols=147 Identities=18% Similarity=0.122 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +++.||+|.+...... .......+.+|+.++.+++|+||+++++++.+.+ ..++||||+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~--~~~lv~e~~ 82 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD--ALCLVLTIM 82 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh-hhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC--eEEEEEEec
Confidence 67999999999999985 7899999988543211 1223346789999999999999999999998877 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05631 83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIP 153 (285)
T ss_pred CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence 999999888644444689999999999999999999999 99999999999999999999999999998653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=6e-25 Score=217.19 Aligned_cols=146 Identities=16% Similarity=0.171 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+...... .....+.+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 83 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI-RLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR--FLYMLMEYV 83 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC--eEEEEEeCC
Confidence 78999999999999987 6889999998543211 1123456889999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 84 ~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 84 PGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 9999999996443 589999999999999999999999 999999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=218.16 Aligned_cols=144 Identities=19% Similarity=0.113 Sum_probs=125.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+++.. +|..||+|.+..... ........+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~E~~ 77 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYA 77 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--EEEEEEeCC
Confidence 36899999999999986 688999999854321 11223456788999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 145 (323)
T cd05595 78 NGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence 9999999886433 589999999999999999999999 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=215.73 Aligned_cols=146 Identities=23% Similarity=0.308 Sum_probs=124.4
Q ss_pred hhhhCcCCCeeEEEEEeCC-----------------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeee
Q 009972 363 SNIIGSSPDSLVYKGTMKG-----------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~-----------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g 425 (521)
.+.||+|+||.||+|.+++ +..||+|.+.... ......+|.+|++++.+++||||+++++
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~ 86 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA---NKNARNDFLKEVKILSRLKDPNIIRLLG 86 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC---CHHHHHHHHHHHHHHhhcCCCCeeEEEE
Confidence 3789999999999998643 2369999874321 2234567999999999999999999999
Q ss_pred EeecCCCCceEEEEeeCCCCChhhhhhcCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 009972 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGE-----------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTI 488 (521)
Q Consensus 426 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 488 (521)
++.+.+ ..++||||+++|+|.+++.... ...++|.++.+|+.|++.||+|||+. +|+|
T Consensus 87 ~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 87 VCVDED--PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEecCC--ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 998876 7899999999999999986321 12478999999999999999999998 9999
Q ss_pred cCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 489 SELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 489 ~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||||+|||+++++.+||+|||+++.+.
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~ 189 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLY 189 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecc
Confidence 9999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=218.36 Aligned_cols=144 Identities=19% Similarity=0.116 Sum_probs=125.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+..... ........+.+|+.+++.++||||+++.+++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~Ey~ 77 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI-IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD--RLCFVMEYV 77 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--EEEEEEeCC
Confidence 36899999999999986 688999999854321 12233457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~ 145 (328)
T cd05593 78 NGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (328)
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccC
Confidence 9999999886433 589999999999999999999999 9999999999999999999999999998853
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.8e-25 Score=219.57 Aligned_cols=146 Identities=14% Similarity=0.170 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.+ +++.||+|.+..... ......+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 100 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREI-LKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN--RVYFLLEFV 100 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC--EEEEEEcCC
Confidence 78999999999999997 688999999853321 11223456899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.+
T Consensus 101 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 101 VGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred CCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 9999999997443 478999999999999999999999 999999999999999999999999999987643
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=223.33 Aligned_cols=144 Identities=16% Similarity=0.073 Sum_probs=126.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+..... ......+.+.+|++++.+++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~--~~~lv~E~~ 83 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM-FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ--YLYLIMEFL 83 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--eeEEEEeCC
Confidence 78999999999999886 688999999854321 12233467889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 84 ~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~ 151 (377)
T cd05629 84 PGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGF 151 (377)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccc
Confidence 999999999643 3488999999999999999999999 9999999999999999999999999999743
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-25 Score=222.91 Aligned_cols=145 Identities=16% Similarity=0.091 Sum_probs=127.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|.+..... ........+.+|+.++..++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv~E~~ 83 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM-LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN--YLYLIMEYL 83 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--eEEEEECCC
Confidence 78999999999999996 688999999854321 11223456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 84 ~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 84 PGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred CCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 9999999997443 489999999999999999999999 99999999999999999999999999998653
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=216.46 Aligned_cols=142 Identities=16% Similarity=0.089 Sum_probs=124.4
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCC
Q 009972 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||.||+|+.. +++.||+|.+.... .........+.+|+.++.+++||||+++++++...+ ..++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~ 77 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAH-IVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE--KLYLVLAFING 77 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHH-hhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC--eEEEEEcCCCC
Confidence 699999999999987 57899999885332 112233456889999999999999999999998776 89999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 445 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~ 143 (312)
T cd05585 78 GELFHHLQREG--RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLN 143 (312)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccC
Confidence 99999997443 489999999999999999999999 9999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=219.37 Aligned_cols=146 Identities=17% Similarity=0.155 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeCC--CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKG--GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~--~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.++ +..||+|.+..... ......+.+.+|+.++..++||||+++++++.+.+ ..++||||
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv~Ey 112 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI-IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES--YLYLVLEF 112 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC--EEEEEEeC
Confidence 789999999999998753 36899998853321 11223456889999999999999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++++||+|||+++.+..
T Consensus 113 ~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 113 VIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999997443 489999999999999999999999 999999999999999999999999999987653
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=222.29 Aligned_cols=148 Identities=16% Similarity=0.113 Sum_probs=127.7
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||.||+++.. +++.+|+|.+.... .......+.+.+|+.+++.++||||+++++++.+.+ ..+
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~--~~~ 119 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFE-MIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK--YLY 119 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-hhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEE
Confidence 4444 78999999999999997 57889999884322 112223456889999999999999999999998877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 999999999999999643 378899999999999999999999 99999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.6e-25 Score=230.25 Aligned_cols=145 Identities=16% Similarity=0.263 Sum_probs=125.8
Q ss_pred hhhCcCCCeeEEEEEeCCC-CEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeee-Eeec---CC-CCceE
Q 009972 364 NIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLG-YCRE---SS-PFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g-~~~~---~~-~~~~~ 436 (521)
++|.+|+|+.||.|....+ .++|+|++...+ +...+.+.+||++|+.++ |+|||.+++ .... .+ ..+.+
T Consensus 43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d----e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl 118 (738)
T KOG1989|consen 43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVND----EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL 118 (738)
T ss_pred EEEccCCcEEEEEEEecCCCceeeeeeeecCC----HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence 7899999999999999865 999999986543 345567899999999996 999999999 3321 22 23789
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
|.||||++|.|-+++..+....|++.++++|+.++++|+++||. ++|+|||||||.+||||+.++..||||||-|.
T Consensus 119 lLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 119 LLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred eehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 99999999999999985544559999999999999999999998 58999999999999999999999999999775
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=212.12 Aligned_cols=162 Identities=20% Similarity=0.300 Sum_probs=132.6
Q ss_pred cccccCHHHHHHHHhhhhhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeee
Q 009972 346 DVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425 (521)
Q Consensus 346 ~~~~~~~~~l~~~~~~f~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g 425 (521)
+...++.+|++..+ ...|++|++|.||+|++ +|+.||||.+...... .....+.|.+|+.++.+++||||++++|
T Consensus 11 ~~~~i~~~~i~~~~---~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 11 DIKCIESDDIDKYT---SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKG-HKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred cceecCHHHcCCCC---CeEEeeCCceEEEEEEE-CCEEEEEEeccccccc-cHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 34456667774332 26799999999999998 6789999998543221 2223467889999999999999999999
Q ss_pred Eeec--CCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 009972 426 YCRE--SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 426 ~~~~--~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~ 503 (521)
++.+ ......++||||+++|+|.++++... .++|..+.+++.+++.||+|||+.. +++||||||+|||+++++.
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~ 161 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYK 161 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCc
Confidence 9876 33236789999999999999997543 5899999999999999999999732 6789999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009972 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+++.+.
T Consensus 162 ~kl~dfg~~~~~~ 174 (283)
T PHA02988 162 LKIICHGLEKILS 174 (283)
T ss_pred EEEcccchHhhhc
Confidence 9999999998654
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-24 Score=215.60 Aligned_cols=143 Identities=20% Similarity=0.121 Sum_probs=124.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+..... ........+.+|++++..++||||+++.+++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~--~~~lv~E~~ 77 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVMEYA 77 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC--EEEEEEeCC
Confidence 36899999999999986 688999999854321 12223456788999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
++|+|.+++.... .+++.++..++.|++.||+|||+ . +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~ 145 (325)
T cd05594 78 NGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKE 145 (325)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCee
Confidence 9999999886433 58999999999999999999997 6 899999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.5e-25 Score=189.47 Aligned_cols=146 Identities=15% Similarity=0.209 Sum_probs=128.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|.||+||||+.+ +++.||+|++...+.+ +.......+|+.+++.++|+|||++++....++ ...+|+|||
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrldddd--egvpssalreicllkelkhknivrl~dvlhsdk--kltlvfe~c 83 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEFC 83 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCC--CCCcHHHHHHHHHHHHhhhcceeehhhhhccCc--eeEEeHHHh
Confidence 68999999999999987 5788999998765432 445667899999999999999999999998887 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
.. +|..+...-.+ .++......++.|+.+||.|+|++ .+.|||+||.|.||..+|+.|++|||+||-+.-.
T Consensus 84 dq-dlkkyfdslng-~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 84 DQ-DLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred hH-HHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 87 88888764332 488889999999999999999999 9999999999999999999999999999976533
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=221.88 Aligned_cols=144 Identities=15% Similarity=0.088 Sum_probs=126.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|++..+... .....+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~--~~~lv~E~~ 83 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL-NRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD--NLYFVMDYI 83 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC--EEEEEEecC
Confidence 67999999999999886 6789999998543211 2233457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++++||+|||+++.+
T Consensus 84 ~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~ 151 (381)
T cd05626 84 PGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGF 151 (381)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence 9999999996443 488999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5e-25 Score=201.42 Aligned_cols=148 Identities=21% Similarity=0.300 Sum_probs=130.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 437 (521)
+++|+|..+.|-++..+ +|+++|+|++....... .....++-.+|+.+|+++ .||+|+++.++|+++. ..++
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s--F~Fl 100 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA--FVFL 100 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc--hhhh
Confidence 78999999999999886 78899999986554211 223456678899999998 7999999999999988 8999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+|.|+.|.|+++|... -.+++....+|++++.+|++|||.. .||||||||+|||+|+++++||+|||+|..+.+
T Consensus 101 VFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa~~l~~ 175 (411)
T KOG0599|consen 101 VFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFACQLEP 175 (411)
T ss_pred hhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccceeeccCC
Confidence 99999999999999644 3489999999999999999999999 999999999999999999999999999998775
Q ss_pred c
Q 009972 518 S 518 (521)
Q Consensus 518 ~ 518 (521)
+
T Consensus 176 G 176 (411)
T KOG0599|consen 176 G 176 (411)
T ss_pred c
Confidence 4
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=209.35 Aligned_cols=146 Identities=16% Similarity=0.203 Sum_probs=129.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||.|..++||+|+.. .+..||||++....-+ ...+.+.+|+..++.++||||++++..|..++ ..|+||.||
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~---~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~--~LWvVmpfM 106 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN---NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS--ELWVVMPFM 106 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeehhhhh---hhHHHHHHHHHHhhhcCCCCcceEEEEEEecc--eeEEeehhh
Confidence 78999999999999985 6789999999654322 23567899999999999999999999998887 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
.+|++.+.++..-...+++..+..|.+++.+||.|||++ |.||||||+.|||||++|.+||+|||..-.+.+
T Consensus 107 a~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 107 AGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred cCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 999999999855445599999999999999999999999 999999999999999999999999997665543
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=215.98 Aligned_cols=144 Identities=17% Similarity=0.131 Sum_probs=123.6
Q ss_pred hhhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+++.. +++.||+|.+..............+.+|+.+++.++||||+++++++..++ ..++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~--~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG--KLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC--eEEEEE
Confidence 46999999999999863 578899999854321112223456789999999999999999999998876 799999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
||+++|+|.+++.... .+.+..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 80 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 149 (323)
T cd05584 80 EYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKE 149 (323)
T ss_pred eCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence 9999999999996443 478888999999999999999999 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=216.39 Aligned_cols=145 Identities=16% Similarity=0.086 Sum_probs=127.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++..... ........+.+|++++..++||||+++++++...+ ..++||||+
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~--~~~lv~e~~ 83 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL-FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE--YLYLAMEYV 83 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC--EEEEEEeCC
Confidence 78999999999999987 588999999854321 11223457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 84 ~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 84 PGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 9999999996433 589999999999999999999999 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-24 Score=220.49 Aligned_cols=144 Identities=14% Similarity=0.081 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|++++++++||||+++++.+.+.+ ..++||||+
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~--~~~lv~E~~ 83 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV-LLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD--NLYFVMDYI 83 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC--EEEEEEeCC
Confidence 68999999999999986 678999998854321 11233457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+
T Consensus 84 ~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~ 151 (382)
T cd05625 84 PGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 151 (382)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence 9999999996443 478889999999999999999999 9999999999999999999999999998643
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-24 Score=214.30 Aligned_cols=144 Identities=21% Similarity=0.158 Sum_probs=121.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH-HHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +|+.||+|.+...... ......++.+|.. +++.++||||+++++++...+ ..++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 77 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL-KKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD--KLYFVLDY 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC--EEEEEEcC
Confidence 36899999999999996 6899999998543211 1122334555554 567899999999999998876 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 78 VNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 99999999986433 589999999999999999999999 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-24 Score=219.46 Aligned_cols=146 Identities=18% Similarity=0.243 Sum_probs=124.5
Q ss_pred hhhhCcCCCeeEEEEEe------CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 363 SNIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+.||+|+||.||+|+. .++..||||++..... ....+.+.+|+.++..+ +||||++++++|...+ ..
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~--~~ 114 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHINIVNLLGACTVGG--PT 114 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcC---cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC--cc
Confidence 38999999999999974 2356899998843221 22345789999999999 8999999999998877 78
Q ss_pred EEEEeeCCCCChhhhhhcCC------------------------------------------------------------
Q 009972 436 MLVFDYASNGTLYEHLHYGE------------------------------------------------------------ 455 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~------------------------------------------------------------ 455 (521)
++||||+++|+|.++++...
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 99999999999999986321
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 456 -------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 456 -------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
...++|..+.+++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 12478999999999999999999998 99999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-24 Score=212.91 Aligned_cols=143 Identities=22% Similarity=0.289 Sum_probs=123.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|++. ++. .||+|.+... ......+++.+|+.+++.++||||++++|+|... ..++|
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~---~~~~v 86 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLI 86 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC---Cceee
Confidence 78999999999999875 333 3888887422 1223456789999999999999999999999865 46799
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.++++... ..+++..+++++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 87 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 87 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccccc
Confidence 99999999999997543 3589999999999999999999999 99999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-24 Score=220.11 Aligned_cols=149 Identities=17% Similarity=0.129 Sum_probs=127.3
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCce
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 435 (521)
.++|. +.||+|+||.||+++.. +++.||+|.+..... ......+.+.+|+.+++.++||||+++++++.+.+ ..
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~--~~ 118 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEM-IKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK--YL 118 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EE
Confidence 34454 78999999999999986 688999999853221 11223345789999999999999999999998877 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++||||+++|+|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 9999999999999998643 378888899999999999999998 9999999999999999999999999999865
Q ss_pred c
Q 009972 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 193 ~ 193 (370)
T cd05596 193 D 193 (370)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-24 Score=213.62 Aligned_cols=143 Identities=20% Similarity=0.151 Sum_probs=120.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH-HHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||+|.+...... .......+.+|.. +++.++||||+++++++.+.+ ..++||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~--~~~lv~e~ 77 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL-KKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE--KLYFVLDY 77 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--EEEEEEcC
Confidence 36999999999999986 6789999998543211 1222344555654 578899999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|..++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 78 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 145 (321)
T cd05603 78 VNGGELFFHLQRER--CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKE 145 (321)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCcc
Confidence 99999998886433 478888999999999999999998 999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-24 Score=207.61 Aligned_cols=144 Identities=29% Similarity=0.388 Sum_probs=123.9
Q ss_pred hhhCcCCCeeEEEEEeC-----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||.|.||.||+|.+. .+..|+||.+... ......+.|.+|++.+.+++||||++++|+|...+ ..++|
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~--~~~lv 79 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS---SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE--PLFLV 79 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT---SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS--SEEEE
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc---cccccceeeeecccccccccccccccccccccccc--ccccc
Confidence 67999999999999997 2467999988321 22334678999999999999999999999999665 68999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|||+++|+|.++++......+++.++.+|+.|||+||+|||+. +++|+||+++||++++++.+||+|||+++..
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPI 153 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence 9999999999999876455799999999999999999999999 9999999999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.2e-24 Score=213.75 Aligned_cols=143 Identities=17% Similarity=0.128 Sum_probs=124.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+++.. +++.||+|.+...... .....+.+.+|..++..+ +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~--~~~lv~e~ 77 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN-DDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES--RLFFVIEF 77 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC--EEEEEEeC
Confidence 36899999999999986 6889999998543211 122345688999999988 7999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 145 (329)
T cd05588 78 VSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 145 (329)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccc
Confidence 99999999886433 589999999999999999999999 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-24 Score=219.14 Aligned_cols=144 Identities=15% Similarity=0.077 Sum_probs=125.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+..... ......+.+.+|++++.+++||||+++++.+.+.+ ..++||||+
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv~E~~ 83 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV-LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD--NLYFVMDYI 83 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH-HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--EEEEEEeCC
Confidence 68999999999999986 688999998843321 11223456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+
T Consensus 84 ~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~ 151 (376)
T cd05598 84 PGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 151 (376)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence 9999999996443 478888999999999999999999 9999999999999999999999999998643
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-24 Score=208.48 Aligned_cols=143 Identities=26% Similarity=0.351 Sum_probs=121.5
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhc--cCCCccceeeeEeecCCCC--ceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESSPF--TRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~~~--~~~lv~ 439 (521)
+.||+|.||+||+|++++ +.||||++...+ ++.+.+|.++.+. +||+||+.+++.-..+++. +.+||+
T Consensus 217 e~IGkGRyGEVwrG~wrG-e~VAVKiF~srd-------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWRG-EDVAVKIFSSRD-------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred EEecCccccceeeccccC-CceEEEEecccc-------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 789999999999999965 569999984332 3467788887764 5999999999876554422 689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE-----LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
||.++|+|+|||.+ ..++-...++++..+|.||++||.+ -+|.|.|||||+.|||+..++...|+|+|||-.
T Consensus 289 dYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 289 DYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred ecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 99999999999974 3489999999999999999999965 368999999999999999999999999999865
Q ss_pred ccc
Q 009972 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
..+
T Consensus 366 h~~ 368 (513)
T KOG2052|consen 366 HDS 368 (513)
T ss_pred ecc
Confidence 543
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-24 Score=207.22 Aligned_cols=144 Identities=25% Similarity=0.298 Sum_probs=124.9
Q ss_pred hhhhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 363 SNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|.++ .+..||+|.+.... .......|.+|+.++.+++||||++++|++...+ ..++|
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 84 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC---SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN--TMMIV 84 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC--CcEEE
Confidence 378999999999999874 35689999874321 1233467999999999999999999999998776 79999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|||+++|+|.+++.... ..++|.+++.++.|++.||+|||+. +++||||||+||++++++.+|++|||.+...
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 99999999999997433 3589999999999999999999998 9999999999999999999999999986643
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-24 Score=212.80 Aligned_cols=144 Identities=19% Similarity=0.144 Sum_probs=124.7
Q ss_pred hhhCcCCCeeEEEEEe----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+++. .+|+.+|+|.+..... .......+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG--KLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--EEEEEE
Confidence 4699999999999976 3578999999854321 1223446788999999999999999999998876 899999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 78 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 78 DFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESI 149 (318)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence 9999999999996433 589999999999999999999999 99999999999999999999999999988653
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.7e-24 Score=209.41 Aligned_cols=142 Identities=21% Similarity=0.250 Sum_probs=123.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.+ ++..||+|.+...... .....+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 85 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKNLKHANIVTLHDIIHTER--CLTLVFEYL 85 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccC---CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC--eEEEEEeCC
Confidence 68999999999999986 6889999988543211 22346789999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 86 ~~-~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~ 153 (288)
T cd07871 86 DS-DLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAK 153 (288)
T ss_pred Cc-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeec
Confidence 85 9999886432 3578999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-24 Score=212.87 Aligned_cols=144 Identities=20% Similarity=0.146 Sum_probs=121.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH-HHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +|+.+|+|.+..+... .......+..|.. +++.++||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~--~~~lv~e~ 77 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL-NRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE--KLYFVLDF 77 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC--EEEEEEcC
Confidence 36899999999999986 6889999998543211 1223345566655 467789999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 78 VNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 9999999988643 3589999999999999999999999 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.6e-24 Score=213.08 Aligned_cols=144 Identities=17% Similarity=0.129 Sum_probs=123.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+++.+ +++.+|+|.+...... .......+.+|+.++.++ +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~E~ 77 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIEY 77 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc-chhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC--EEEEEEeC
Confidence 36899999999999986 6789999998543211 122345678899888876 8999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|..++.... .+++..+..|+.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 78 ~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 78 VNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 99999999886433 489999999999999999999999 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.8e-24 Score=215.14 Aligned_cols=139 Identities=19% Similarity=0.247 Sum_probs=121.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+.... .......+.+|++++++++|+||+++++++...+ ..++||||+
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 154 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG--EIQVLLEFM 154 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC--eEEEEEecC
Confidence 68999999999999986 68999999984322 2234567899999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+.. ..++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 155 ~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 155 DGGSLEGTH------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILA 219 (353)
T ss_pred CCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence 999987543 256778889999999999999999 99999999999999999999999999998754
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.9e-25 Score=219.44 Aligned_cols=158 Identities=23% Similarity=0.313 Sum_probs=137.0
Q ss_pred HHHHHHhhhhhhhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC
Q 009972 354 ELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 354 ~l~~~~~~f~~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
|+++......++||-|.||.||.|.|+. .-.||||.++.. .-..++|..|..+|+.++|||+|+|+|+|....
T Consensus 263 EmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep- 336 (1157)
T KOG4278|consen 263 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP- 336 (1157)
T ss_pred hccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-----chhHHHHHHHHHHHHhhcCccHHHHhhhhccCC-
Confidence 3443333334899999999999999974 567999987322 123568999999999999999999999998776
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
..|||+|||.+|+|.+||++..+..++--..+.+|.||+.||.||..+ .+|||||.++|+|+.++..+||+||||+
T Consensus 337 -PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLs 412 (1157)
T KOG4278|consen 337 -PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLS 412 (1157)
T ss_pred -CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchh
Confidence 689999999999999999987776778788899999999999999999 9999999999999999999999999999
Q ss_pred hhccccccC
Q 009972 513 FLLVSSIIC 521 (521)
Q Consensus 513 ~~~~~~~~~ 521 (521)
|+|....||
T Consensus 413 RlMtgDTYT 421 (1157)
T KOG4278|consen 413 RLMTGDTYT 421 (1157)
T ss_pred hhhcCCcee
Confidence 999887765
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-24 Score=220.92 Aligned_cols=150 Identities=21% Similarity=0.235 Sum_probs=128.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----CCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
+.||+|+||.||+|+.+ +|+.||||.+.... ....++...+|++++++++|+|||++++.-++.. .....+|
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~---~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKES---SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhc---ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 78999999999999976 79999999885433 1233556889999999999999999999876654 4478999
Q ss_pred EeeCCCCChhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee--cCCC--CeeeCCCchhh
Q 009972 439 FDYASNGTLYEHLHYG-ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL--TEDF--SPKVSPLCLSF 513 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl--d~~~--~~kl~DfGla~ 513 (521)
||||.+|||+..+... ....|++...+.+..+++.||.|||++ +|+||||||.||++ .++| .-||+|||.||
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 9999999999999753 345699999999999999999999998 99999999999998 3444 57999999999
Q ss_pred hccccc
Q 009972 514 LLVSSI 519 (521)
Q Consensus 514 ~~~~~~ 519 (521)
-+++..
T Consensus 173 el~d~s 178 (732)
T KOG4250|consen 173 ELDDNS 178 (732)
T ss_pred cCCCCC
Confidence 887643
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=219.81 Aligned_cols=153 Identities=23% Similarity=0.263 Sum_probs=131.8
Q ss_pred hhhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
|..+||+|+|-+||||.+. +|.+||.-.+............++|..|+++|+.|+|||||+++.++.+......-+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 4589999999999999986 688888765544433334455678999999999999999999999998877556889999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeeeCCCchhhhccc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-~~~~kl~DfGla~~~~~ 517 (521)
.|..|+|..|+++.++ ++.+....+++||.+||.|||++ .|||||||||.+||+|.. .|.+||+|+|||+++..
T Consensus 124 L~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999975543 78889999999999999999996 789999999999999974 68999999999998764
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-24 Score=215.99 Aligned_cols=145 Identities=14% Similarity=0.088 Sum_probs=126.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.+ +++.||+|.+.... .........+.+|+.++..++||||+++++.+.+.+ ..++||||+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~--~~~lv~E~~ 83 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKAD-MLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR--NLYLIMEFL 83 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-HhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEEEeCC
Confidence 78999999999999986 68899999985322 112233457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 84 PGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred CCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence 9999999996443 489999999999999999999999 99999999999999999999999999988653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=206.16 Aligned_cols=145 Identities=19% Similarity=0.122 Sum_probs=125.2
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCC
Q 009972 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||.||+++.+ +|+.+|+|.+..+... .......+..|++++.+++||||+++++++.+.. ..++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~--~~~lv~e~~~g 77 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLK-KKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT--HLCLVMSLMNG 77 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhh-cchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC--eEEEEEecCCC
Confidence 699999999999986 6899999998543211 1122345667999999999999999999998776 89999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 445 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++..+.
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~ 146 (277)
T cd05607 78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELK 146 (277)
T ss_pred CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecC
Confidence 9999988755555689999999999999999999998 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=202.57 Aligned_cols=144 Identities=21% Similarity=0.283 Sum_probs=126.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.+|+|.+... ........|.+|++++++++||||++++++|.... ..++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET---LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC--CeEEEEeec
Confidence 36899999999999986 6888999986422 12334567999999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.++++... ..++|.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 145 (252)
T cd05084 76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEE 145 (252)
T ss_pred cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccc
Confidence 9999999996433 3589999999999999999999999 99999999999999999999999999987644
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.5e-24 Score=205.02 Aligned_cols=144 Identities=19% Similarity=0.254 Sum_probs=128.3
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|++|.||+|...+++.||+|.+..... ..+++.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 83 (261)
T cd05068 11 LRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE--PIYIVTELM 83 (261)
T ss_pred EEEecccCCccEEEEEecCCeEEEEEeeCCCcc-----cHHHHHHHHHHHHHCCCCCccceeEEEecCC--Ceeeeeecc
Confidence 388999999999999988888899998743221 2456899999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......++|.++.+++.+++.|+.|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 154 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIK 154 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence 999999999755445689999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.6e-24 Score=216.94 Aligned_cols=154 Identities=16% Similarity=0.129 Sum_probs=130.3
Q ss_pred HHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC
Q 009972 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 354 ~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
++....++|. +.||+|+||.||+++.+ +++.+|+|.+..... ......+.+.+|+.+++.++||||+++++++.+.
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 3444445665 78999999999999997 678899998853221 1122345678999999999999999999999887
Q ss_pred CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCc
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfG 510 (521)
. ..++||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 116 ~--~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 116 R--YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred C--EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCC
Confidence 6 899999999999999998643 378888999999999999999999 99999999999999999999999999
Q ss_pred hhhhcc
Q 009972 511 LSFLLV 516 (521)
Q Consensus 511 la~~~~ 516 (521)
+++.+.
T Consensus 188 ~a~~~~ 193 (371)
T cd05622 188 TCMKMN 193 (371)
T ss_pred ceeEcC
Confidence 998654
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=203.07 Aligned_cols=141 Identities=18% Similarity=0.296 Sum_probs=125.5
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+++.+++..+|+|.+.... ...++|.+|+.++++++||||+++++++...+ ..++||||++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~iv~e~~~ 82 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGA-----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK--PLYIVTEFME 82 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCC-----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCC--CEEEEEEcCC
Confidence 7799999999999999888889999874221 12357899999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+|+|.++++... ..++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~ 150 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYV 150 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcccc
Confidence 999999997433 2589999999999999999999998 9999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=9e-24 Score=208.14 Aligned_cols=147 Identities=19% Similarity=0.128 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||+||++... +++.||+|.+...... .......+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 82 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTLM 82 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC--eEEEEEecc
Confidence 67999999999999986 6889999998543211 1223456788999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 83 NGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred CCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 999999988654445689999999999999999999999 99999999999999999999999999998653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=204.02 Aligned_cols=145 Identities=21% Similarity=0.308 Sum_probs=130.0
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|...++..+++|.+..... .....+.+|+.+++.++||||+++++++...+ ..++||||++
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~ 85 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL----LKQQDFQKEVQALKRLRHKHLISLFAVCSVGE--PVYIITELME 85 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccch----hhHHHHHHHHHHHhcCCCcchhheeeeEecCC--CeEEEEeecc
Confidence 78999999999999998889999998754321 23456889999999999999999999998877 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......+++.++.+++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.+
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 86 KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 99999999865555689999999999999999999998 999999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.4e-24 Score=212.89 Aligned_cols=146 Identities=15% Similarity=0.091 Sum_probs=127.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+++.. +++.||+|.+..... ......+.+.+|+.+++.++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 83 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL-LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD--NLYLVMEYQ 83 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--eEEEEECCC
Confidence 78999999999999986 688999999854321 12234456889999999999999999999998776 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 84 ~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 84 PGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred CCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 9999999997442 3589999999999999999999999 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=204.10 Aligned_cols=144 Identities=17% Similarity=0.302 Sum_probs=128.3
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+ ..+++|||++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 84 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE--PIYIITEYMA 84 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCc-----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--CcEEEEecCC
Confidence 7899999999999998888889999874321 12457899999999999999999999998776 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......+++.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+..
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 99999999755445689999999999999999999998 999999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.7e-24 Score=211.61 Aligned_cols=143 Identities=15% Similarity=0.104 Sum_probs=123.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||+|.+..... ......+.+..|.+++..+ +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~--~~~lv~E~ 77 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVI-LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD--RLFFVMEY 77 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--eEEEEEeC
Confidence 36999999999999987 578999999854321 1122345677899988866 8999999999998877 79999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|..++.... .+++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~ 145 (321)
T cd05591 78 VNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKE 145 (321)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeeccccee
Confidence 99999999986433 489999999999999999999999 999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=206.84 Aligned_cols=145 Identities=21% Similarity=0.115 Sum_probs=124.1
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCC
Q 009972 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||+||++... +++.+|+|.+...... .....+.+..|++++++++||||+++.+++.... ..++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-KRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT--DLCLVMTIMNG 77 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh-hhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC--eEEEEEeCCCC
Confidence 699999999999986 6889999998543211 1122346788999999999999999999988776 79999999999
Q ss_pred CChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 445 GTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 445 g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 148 (280)
T cd05608 78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELK 148 (280)
T ss_pred CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecC
Confidence 9999887532 234589999999999999999999999 99999999999999999999999999997654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=211.47 Aligned_cols=144 Identities=21% Similarity=0.133 Sum_probs=119.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH-HHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +++.||+|.+..+... .......+..|.. +++.++||||+++++++...+ ..++||||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~--~~~lv~e~ 77 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVLDY 77 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH-hhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC--eEEEEEeC
Confidence 36899999999999987 5778999998543211 1122234444544 567889999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+.+.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 78 INGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 99999999996433 478888889999999999999999 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=204.65 Aligned_cols=143 Identities=27% Similarity=0.317 Sum_probs=120.5
Q ss_pred hhCcCCCeeEEEEEeCCC---CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 365 IIGSSPDSLVYKGTMKGG---PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~~~---~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||+||+|...++ ..+++|.+... ........|.+|+.+++.++||||+++++++.... ..++||||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~--~~~lv~e~ 76 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS---ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI--PYLLVLEF 76 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCcc---CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC--ceEEEEEe
Confidence 589999999999976543 45777765322 12234567899999999999999999999998776 78999999
Q ss_pred CCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... ....++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 150 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQ 150 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccccccc
Confidence 99999999997432 22357888899999999999999999 9999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.7e-24 Score=212.83 Aligned_cols=146 Identities=16% Similarity=0.114 Sum_probs=126.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+++.. +++.||+|.+.... .......+.+.+|+.++..++|+||+++++++.+.+ ..++||||+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 83 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE-MLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN--NLYLVMDYY 83 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-HhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC--eEEEEEecC
Confidence 78999999999999986 68899999985322 112233456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 84 VGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred CCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 999999999642 23589999999999999999999999 99999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-24 Score=214.00 Aligned_cols=142 Identities=19% Similarity=0.267 Sum_probs=126.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+.|.||.++.. ++++||||++...... .++-..+|+.+|+..+|+|||.++.-|.-.+ +.++|||||
T Consensus 279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~----~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d--eLWVVMEym 352 (550)
T KOG0578|consen 279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP----KKELLLNEILVMRDLHHPNIVNFLDSYLVGD--ELWVVMEYM 352 (550)
T ss_pred hhhccccccceeeeeeccCCceEEEEEEEeccCC----chhhhHHHHHHHHhccchHHHHHHHHhcccc--eeEEEEeec
Confidence 68999999999999875 6889999999655322 2334789999999999999999999887766 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+.+... .+++.++..|++++++||+|||.. +|+|||||.+|||++.++.+||+|||++..+..
T Consensus 353 ~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 353 EGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred CCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 999999988532 389999999999999999999999 999999999999999999999999999987764
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.2e-24 Score=216.86 Aligned_cols=146 Identities=18% Similarity=0.261 Sum_probs=124.0
Q ss_pred hhhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 363 SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+.||+|+||.||+|+.. ++..||+|++..... ......+.+|+++++.+ +|+|||+++++|.... ..
T Consensus 43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~--~~ 117 (374)
T cd05106 43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH---TDEREALMSELKILSHLGQHKNIVNLLGACTHGG--PV 117 (374)
T ss_pred hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC---HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC--Ce
Confidence 378999999999999852 235799998853321 22345688999999999 8999999999998877 78
Q ss_pred EEEEeeCCCCChhhhhhcCC------------------------------------------------------------
Q 009972 436 MLVFDYASNGTLYEHLHYGE------------------------------------------------------------ 455 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~------------------------------------------------------------ 455 (521)
++||||+++|+|.++++...
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 99999999999999985321
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 456 --------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 456 --------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
..++++.++.+|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~ 263 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIM 263 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeecc
Confidence 12478999999999999999999998 99999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=204.92 Aligned_cols=145 Identities=20% Similarity=0.279 Sum_probs=125.1
Q ss_pred hhhCcCCCeeEEEEEeC-----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||++..+ ++..||+|++.... ....+.|.+|++++++++||||+++++++...+....++|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 85 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST----AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLV 85 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEE
Confidence 68999999999999853 57889999874322 2334578999999999999999999998865443368999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 86 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 86 MEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 99999999999996432 3589999999999999999999999 99999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-24 Score=212.55 Aligned_cols=146 Identities=16% Similarity=0.080 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+.... .........+.+|+.++..++|+||+++++++.+.+ ..++||||+
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~--~~~lv~Ey~ 83 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWE-MLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN--YLYLVMDYY 83 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-HHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEEEeCC
Confidence 78999999999999987 67889999885322 111223456888999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 84 VGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred CCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 9999999997432 3589999999999999999999999 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-24 Score=217.62 Aligned_cols=146 Identities=18% Similarity=0.227 Sum_probs=129.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+-||+|+.|.|-.|++. +|+.+|||.+..... ........+.+|+.+|+-+.|||++++++.+++.. +.|+|.||+
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~-~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~--~lylvlEyv 94 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSE-LSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ--HLYLVLEYV 94 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccc-cccccccchhhhhHHHHHhcCCCeeeeeeeeccCc--eEEEEEEec
Confidence 56999999999999985 899999999865531 12223456889999999999999999999999887 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|.|++++..++ ++++.+..++..||..|+.|+|+. +|+||||||+|+|||.++++||+|||+|.+-.+
T Consensus 95 ~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 95 PGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred CCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 9999999997655 489999999999999999999999 999999999999999999999999999987544
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=209.92 Aligned_cols=144 Identities=17% Similarity=0.184 Sum_probs=126.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. ++..+|+|.+.... .....+.+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 85 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEHM 85 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEeecC
Confidence 68999999999999987 67889999875432 2234567999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.+++.||+|||+.. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 86 ~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 86 DGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (331)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence 9999999996433 4899999999999999999999851 69999999999999999999999999987653
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=211.21 Aligned_cols=144 Identities=17% Similarity=0.138 Sum_probs=123.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.+ +++.||+|.+...... .....+.+..|..++..+ +||||+++++++...+ ..++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~--~~~iv~Ey 77 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD--RLFFVMEF 77 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC--EEEEEEcC
Confidence 36899999999999987 5789999988533211 122345677888888876 7999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 78 VNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 99999999986443 489999999999999999999999 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-24 Score=215.04 Aligned_cols=146 Identities=16% Similarity=0.099 Sum_probs=128.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|++...... .......+.+|++++..++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 83 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI-KRNQIAHVRAERDILADADSPWIVKLYYSFQDEE--HLYLVMEYM 83 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhcCCCCccchhhheecCC--eEEEEEcCC
Confidence 68999999999999987 6899999998543211 1233457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 84 ~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 84 PGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred CCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 999999999754 3589999999999999999999998 999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=211.98 Aligned_cols=145 Identities=16% Similarity=0.091 Sum_probs=124.3
Q ss_pred hhhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+++.. +++.||+|.+............+.+.+|+.++.++ +||||+++++++...+ ..++|
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~--~~~lv 83 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA--KLHLI 83 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC--EEEEE
Confidence 68999999999999863 57899999985332111122345688999999999 5999999999998776 78999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 84 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 84 LDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 99999999999996443 489999999999999999999998 9999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-24 Score=213.69 Aligned_cols=145 Identities=23% Similarity=0.372 Sum_probs=125.6
Q ss_pred cCHHHHHHHHhhhhhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeec
Q 009972 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (521)
Q Consensus 350 ~~~~~l~~~~~~f~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 429 (521)
+.+++|.+. +.+|.|+.|.||+|++++ +.||||++... -..+|+-|++++||||+.+.|+|..
T Consensus 121 iPFe~IsEL-----eWlGSGaQGAVF~Grl~n-etVAVKKV~el-----------kETdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 121 IPFEEISEL-----EWLGSGAQGAVFLGRLHN-ETVAVKKVREL-----------KETDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred CCHHHhhhh-----hhhccCcccceeeeeccC-ceehhHHHhhh-----------hhhhHHHHHhccCcceeeEeeeecC
Confidence 455666544 689999999999999976 57999987321 1357888999999999999999988
Q ss_pred CCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCC
Q 009972 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 430 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~Df 509 (521)
.. .++||||||+.|.|++.|+.+ ++++....+.+..+||.||.|||.+ .|||||||+-||||..+..+||+||
T Consensus 184 sP--cyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDF 256 (904)
T KOG4721|consen 184 SP--CYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDF 256 (904)
T ss_pred Cc--eeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccc
Confidence 76 789999999999999999643 4588888999999999999999999 9999999999999999999999999
Q ss_pred chhhhcccc
Q 009972 510 CLSFLLVSS 518 (521)
Q Consensus 510 Gla~~~~~~ 518 (521)
|-++.+.+.
T Consensus 257 GTS~e~~~~ 265 (904)
T KOG4721|consen 257 GTSKELSDK 265 (904)
T ss_pred cchHhhhhh
Confidence 999876543
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=209.55 Aligned_cols=144 Identities=17% Similarity=0.197 Sum_probs=125.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... ++..+|+|.+.... .......+.+|++++++++||||++++++|.+.+ ..++||||+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 85 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEHM 85 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC--EEEEEEecC
Confidence 78999999999999997 67888888875432 1234567899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++.....++.+++.||+|||+.. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 86 ~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 86 DGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (333)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence 9999999996433 4889999999999999999999741 69999999999999999999999999998654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=209.49 Aligned_cols=144 Identities=18% Similarity=0.149 Sum_probs=121.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||+|.+...... .....+.+..|..++... +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~--~~~lv~e~ 77 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL-EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE--HLFFVMEY 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC--EEEEEEcC
Confidence 36999999999999986 5788999988543211 112234456677777654 8999999999998776 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 78 LNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 99999999986443 489999999999999999999998 9999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=215.39 Aligned_cols=144 Identities=22% Similarity=0.286 Sum_probs=123.2
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 436 (521)
++||+|+||.||+|+... +..||+|++.... .....+.|.+|++++++++ ||||++++++|.... ..+
T Consensus 43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~--~~~ 117 (400)
T cd05105 43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA---RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG--PIY 117 (400)
T ss_pred heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC---ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC--ceE
Confidence 789999999999998632 3469999884332 1233467999999999995 999999999998776 799
Q ss_pred EEEeeCCCCChhhhhhcCC-------------------------------------------------------------
Q 009972 437 LVFDYASNGTLYEHLHYGE------------------------------------------------------------- 455 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~------------------------------------------------------------- 455 (521)
+||||+++|+|.++++...
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T cd05105 118 IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEA 197 (400)
T ss_pred EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhh
Confidence 9999999999999886321
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 009972 456 ---------------------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 456 ---------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~ 502 (521)
...+++.++..++.|+++||+|||+. +|+||||||+|||+++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~~ 274 (400)
T cd05105 198 SKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQGK 274 (400)
T ss_pred hhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCCC
Confidence 12478999999999999999999998 999999999999999999
Q ss_pred CeeeCCCchhhhc
Q 009972 503 SPKVSPLCLSFLL 515 (521)
Q Consensus 503 ~~kl~DfGla~~~ 515 (521)
.+||+|||+++.+
T Consensus 275 ~~kL~DfGla~~~ 287 (400)
T cd05105 275 IVKICDFGLARDI 287 (400)
T ss_pred EEEEEeCCcceec
Confidence 9999999999865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=202.81 Aligned_cols=145 Identities=23% Similarity=0.327 Sum_probs=128.0
Q ss_pred hhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|+||.||+|..+ .++.||+|.+.... ....++.+|++++.+++||||+++++++..++ ..+++|||
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (263)
T cd05052 11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEF 83 (263)
T ss_pred eeecCCcccceEEEEEEecCCceEEEEEecCCc-----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC--CcEEEEEe
Confidence 378999999999999986 57889999874221 22456899999999999999999999998876 78999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++|+|.+++.......+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.+..
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 9999999999755545689999999999999999999998 999999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=207.36 Aligned_cols=142 Identities=21% Similarity=0.270 Sum_probs=123.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.+++.++||||+++++++.+.. ..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 85 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE---GTPFTAIREASLLKGLKHANIVLLHDIIHTKE--TLTLVFEYV 85 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEecccccc---ccchhHHHHHHHHhhCCCCCcCeEEEEEecCC--eEEEEEECC
Confidence 78999999999999997 6889999998543221 12345788999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 86 ~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 153 (303)
T cd07869 86 H-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAK 153 (303)
T ss_pred C-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceec
Confidence 6 58888886432 3588999999999999999999999 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-23 Score=200.71 Aligned_cols=143 Identities=21% Similarity=0.312 Sum_probs=126.0
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||+|+.+++..+|+|.+..... ....|.+|++++++++||||+++++++...+ ..++||||+
T Consensus 9 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR--PIFIVTEYM 81 (256)
T ss_pred hhhhccCCCceEEEeEecCCccEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--ceEEEEecC
Confidence 378999999999999988777899998743221 2346889999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.++++.... .++|..+..|+.+++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 82 ~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 82 ANGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVL 151 (256)
T ss_pred CCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecc
Confidence 99999999974332 589999999999999999999999 99999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-23 Score=202.45 Aligned_cols=142 Identities=23% Similarity=0.252 Sum_probs=118.7
Q ss_pred hhCcCCCeeEEEEEeCCCC---EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 365 IIGSSPDSLVYKGTMKGGP---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~~~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|+..++. .+++|.+... ......+.|.+|+.+++.++||||++++++|.... ..++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN---ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI--PYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC---CChHHHHHHHHHHHHHhccCCcchhheEEEecCCC--ccEEEEec
Confidence 5999999999999875443 3445544222 12234567999999999999999999999998776 78999999
Q ss_pred CCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|.++++... ....++.....++.|+++||+|||+. +++||||||+|||+++++.+||+|||+++.
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~ 148 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPS 148 (268)
T ss_pred CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccc
Confidence 99999999997432 23467778889999999999999998 999999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=209.58 Aligned_cols=143 Identities=17% Similarity=0.131 Sum_probs=123.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +++.+|+|.+..... ......+.+.+|+.++.++ +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~ 77 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV-HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS--RLFLVIEY 77 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC--EEEEEEeC
Confidence 36999999999999986 578899999854321 1122345688999999888 6999999999998877 79999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~ 145 (327)
T cd05617 78 VNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKE 145 (327)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEecccccee
Confidence 99999999886433 489999999999999999999999 999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-23 Score=198.92 Aligned_cols=144 Identities=22% Similarity=0.308 Sum_probs=126.4
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
++||+|+||.||+|..+++..+|+|.+.... .......|.+|+.++++++||||++++++|...+ ..++||||++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 75 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL---PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ--PIYIVMELVP 75 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC--ccEEEEECCC
Confidence 3689999999999998888999999874322 2233457899999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++.... ..++|..+..++.+++.||.|+|+. +++||||||+||++++++.+||+|||+++...
T Consensus 76 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 144 (250)
T cd05085 76 GGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQED 144 (250)
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecc
Confidence 999999986433 3589999999999999999999998 99999999999999999999999999987543
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=210.59 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=125.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.+ +++.+|+|.+.... .........+.+|+.++..++|+||+++++++.+.+ ..++||||+
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~ey~ 83 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-MLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN--NLYLVMDYY 83 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH-HHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC--EEEEEEecc
Confidence 78999999999999987 57789999874322 111223445889999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 84 ~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~ 152 (332)
T cd05623 84 VGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKL 152 (332)
T ss_pred CCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheec
Confidence 9999999997432 3589999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-23 Score=200.36 Aligned_cols=142 Identities=21% Similarity=0.330 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..++..+|+|.+..... ...+|.+|+.++.+++||||+++++++.... ..++||||++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 82 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR--PIYIVTEYMS 82 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCcc-----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCC--CcEEEEEcCC
Confidence 68999999999999988777899998743221 2356899999999999999999999998766 6899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++..... .++|..+.+++.+++.||+|||+. +++|+||||+||++++++.+||+|||+++.+.
T Consensus 83 ~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 83 NGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVL 151 (256)
T ss_pred CCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecC
Confidence 9999999974332 589999999999999999999998 99999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-23 Score=215.37 Aligned_cols=146 Identities=18% Similarity=0.194 Sum_probs=126.3
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. .+||+|+||+|+.+..+ +++.+|||.+++. ........+..+.|.+++.-. +||.+++++..+.+.+ +.
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~-~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~--~l 444 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKG-DILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE--HL 444 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeecc-ceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC--eE
Confidence 4454 89999999999999998 5788999998543 333344566788898888777 6999999999999888 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+.||||+.+|++..+++ ...+++++..-+|..|+.||.|||++ +|||||||.+|||||.+|.+||+|||++|-
T Consensus 445 ~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccc
Confidence 99999999999665554 23589999999999999999999999 999999999999999999999999999985
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-23 Score=200.70 Aligned_cols=146 Identities=18% Similarity=0.122 Sum_probs=130.0
Q ss_pred hhhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|.-|+||.+++++ +..+|+|++.+... .......+...|-+||+.++||.+..|++.++.++ ..+++||||
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l-~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~--~~cl~meyC 159 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESL-ASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK--YSCLVMEYC 159 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHH-hhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc--eeEEEEecC
Confidence 689999999999999985 58899999854432 22333456778999999999999999999999988 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|....+++....+++..+.-+|.+|.-||+|||.. |||+|||||+||||-++|++.|+||-|+...
T Consensus 160 pGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 160 PGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred CCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 999999999877777899999999999999999999999 9999999999999999999999999998654
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-23 Score=201.07 Aligned_cols=145 Identities=24% Similarity=0.354 Sum_probs=126.6
Q ss_pred hhhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 363 SNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|+++. ...||+|.+.... ......+|.+|+.++.+++||||+++++++...+ ..++|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~iv 83 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS---SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR--PVMII 83 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC--ceEEE
Confidence 3789999999999999852 3578999874322 2334567999999999999999999999998776 78999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..++|.++.+++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 99999999999997533 3689999999999999999999998 99999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-24 Score=199.58 Aligned_cols=149 Identities=23% Similarity=0.293 Sum_probs=124.2
Q ss_pred hhhCcCCCeeEEEEEeCC-----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
..||+|.||.||+++-.+ ...+|+|++....+. ........+|+.+++.++||||+.|..++...+ ...+++
T Consensus 30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~--tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d-~~v~l~ 106 (438)
T KOG0666|consen 30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDG--TGISMSACREIALLRELKHPNVISLVKVFLSHD-KKVWLL 106 (438)
T ss_pred ceecccccceeeEeeeccCCcccchhhHHHHHhccCCC--CCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC-ceEEEE
Confidence 579999999999996642 237999998544322 223446789999999999999999999887732 278999
Q ss_pred EeeCCCCChhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC----CCeeeCCCch
Q 009972 439 FDYASNGTLYEHLHYG---ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED----FSPKVSPLCL 511 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~----~~~kl~DfGl 511 (521)
+||.++ +|.+.|+.. ....++-.....|..||..|+.|||++ =|+||||||.|||+..+ |.+||+|||+
T Consensus 107 fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 107 FDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred ehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeecccH
Confidence 999999 999999732 235688999999999999999999999 89999999999999766 9999999999
Q ss_pred hhhccccc
Q 009972 512 SFLLVSSI 519 (521)
Q Consensus 512 a~~~~~~~ 519 (521)
||++.+..
T Consensus 183 aR~~~~pl 190 (438)
T KOG0666|consen 183 ARLFNNPL 190 (438)
T ss_pred HHHhhccc
Confidence 99987654
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-24 Score=211.27 Aligned_cols=148 Identities=17% Similarity=0.191 Sum_probs=133.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCc-eEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT-RMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~-~~lv~ey 441 (521)
+.+|+|+||.++.++.+ +++.+++|++..... ....++...+|+.++++++|||||.+.+.+..++ . .+|||+|
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~--t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~--~~l~Ivm~Y 85 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKL--TEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG--QLLCIVMEY 85 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEecccc--CchhhHHHHHHHHHHHhccCCCeeeeccchhcCC--ceEEEEEee
Confidence 78999999999999887 678899999866542 2344567899999999999999999999998876 5 8999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
+++|++.+.+.+.++..+++.+..+++.|++.|+.|||+. .|+|||||+.||+++.+..+||.|||+||.+.+.
T Consensus 86 ~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 86 CEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred cCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999876666789999999999999999999998 9999999999999999999999999999998764
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=204.28 Aligned_cols=145 Identities=25% Similarity=0.350 Sum_probs=124.3
Q ss_pred hhhhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 363 SNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
.+.||+|+||+||+|+. .++..+++|.+..... ......|.+|++++++++||||+++++++.... ..++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 84 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN---PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ--PVCM 84 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC---HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC--ceEE
Confidence 37899999999999985 2457899998853221 223457899999999999999999999998776 7899
Q ss_pred EEeeCCCCChhhhhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 009972 438 VFDYASNGTLYEHLHYGE---------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~ 502 (521)
||||+++|+|.+++.... ...+++.+...++.+++.||+|||+. +++||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 999999999999985221 23478999999999999999999998 999999999999999999
Q ss_pred CeeeCCCchhhhc
Q 009972 503 SPKVSPLCLSFLL 515 (521)
Q Consensus 503 ~~kl~DfGla~~~ 515 (521)
.+||+|||+++.+
T Consensus 162 ~~kl~dfg~~~~~ 174 (283)
T cd05090 162 HVKISDLGLSREI 174 (283)
T ss_pred cEEeccccccccc
Confidence 9999999999865
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-23 Score=204.85 Aligned_cols=147 Identities=19% Similarity=0.244 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+++|+|.||+||-|+++ +|+.||||.+.+.+ .....+.+.++|+.+|++++||.||.+.-.|++.+ ..++|||-+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlr--Fp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e--rvFVVMEKl 645 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLR--FPTKQESQLRNEVAILQNLHHPGIVNLECMFETPE--RVFVVMEKL 645 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeeccc--CCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc--eEEEEehhh
Confidence 89999999999999996 79999999985543 22334567999999999999999999999999887 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeeeCCCchhhhcccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~---~~~kl~DfGla~~~~~~ 518 (521)
.+ +..+.|-......|++....-++.||..||.|||.. +|+|+||||+||||.+. -.+||+|||+||++.+.
T Consensus 646 ~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 646 HG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred cc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 65 766666544445699999999999999999999999 99999999999999642 37999999999998754
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=204.83 Aligned_cols=144 Identities=16% Similarity=0.183 Sum_probs=123.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.+ +++.||+|++..... .....+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 82 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE--NEEVKETTLRELKMLRTLKQENIVELKEAFRRRG--KLYLVFEYV 82 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccc--cccchhhHHHHHHHHHhCCCccccchhhhEecCC--EEEEEEecC
Confidence 68999999999999997 678899998854321 1233456889999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++.+..+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 83 ~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 151 (287)
T cd07848 83 EKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLS 151 (287)
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccc
Confidence 98777655432 23589999999999999999999998 99999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-23 Score=207.57 Aligned_cols=143 Identities=18% Similarity=0.152 Sum_probs=123.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||+||+|+.+ ++..||+|.+...... .......+.+|.+++..+ +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 77 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL-QDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD--RLFFVMEY 77 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--EEEEEEcC
Confidence 36899999999999987 5789999998543211 122345677899998887 7999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|..++.... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 78 ~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 145 (318)
T cd05570 78 VNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKE 145 (318)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCee
Confidence 99999999886443 489999999999999999999999 999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-23 Score=208.16 Aligned_cols=142 Identities=19% Similarity=0.173 Sum_probs=121.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHH---hccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADL---ARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l---~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|++++ .+++||||+++++++...+ ..++||
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~--~~~lv~ 81 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDI-IARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED--HVCFVM 81 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC--EEEEEE
Confidence 67999999999999986 688999999854321 1122334566676654 5678999999999998877 899999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
||+++|+|..+++. ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 82 E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~ 150 (324)
T cd05589 82 EYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKE 150 (324)
T ss_pred cCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCcc
Confidence 99999999988863 2489999999999999999999999 999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=200.75 Aligned_cols=145 Identities=23% Similarity=0.251 Sum_probs=124.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC---CCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES---SPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~---~~~~~~lv~ 439 (521)
+.||+|+||.|..+..+ +|..||+|++... .......++..+|+++|++++|+||+.+.+.+..+ +-...|+|+
T Consensus 28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~--F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~ 105 (359)
T KOG0660|consen 28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNP--FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF 105 (359)
T ss_pred ccccCcceeeEEEEEEcCCCCEeehhhhhhh--hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence 57999999999999996 7899999998421 11223456788999999999999999999988652 222689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+|+- +|...++.+. .|+.....-+..|+.+||.|+|+. +|+||||||+|+|++.+...||+|||+||.++
T Consensus 106 elMet-DL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 106 ELMET-DLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred hHHhh-HHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeecc
Confidence 99966 9999996443 488999999999999999999999 99999999999999999999999999999885
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-23 Score=208.52 Aligned_cols=146 Identities=16% Similarity=0.097 Sum_probs=123.4
Q ss_pred hhhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEE
Q 009972 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.++||+|+||.||+|+.+ +++.||+|.+..... ......+.+..|..++..+. |++|+++.+++...+ ..++||
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~ 80 (323)
T cd05615 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV-IQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD--RLYFVM 80 (323)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC--EEEEEE
Confidence 3478999999999999986 688999998853321 11223456788999988885 577888988888776 799999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
||+++|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 81 Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~ 151 (323)
T cd05615 81 EYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEH 151 (323)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEecccccccc
Confidence 9999999999986433 489999999999999999999999 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-23 Score=198.83 Aligned_cols=142 Identities=23% Similarity=0.325 Sum_probs=121.9
Q ss_pred hhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|++. ++..||+|.+.... .....+.|.+|+.++++++||||+++++++... ..++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~---~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN---EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE---ALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc---ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC---CeEEEEEe
Confidence 3899999999999874 34568999874332 233456799999999999999999999998643 57999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... ..+++.++.+++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 76 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 76 ASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALG 146 (257)
T ss_pred CCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCcccccc
Confidence 99999999996432 3589999999999999999999998 99999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-23 Score=206.59 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=121.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +++.||+|.+...... .....+.+..|..++... +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~ey 77 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE--NLFFVMEY 77 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC--EEEEEEeC
Confidence 36899999999999987 5788999998543211 112234567788888764 9999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05619 78 LNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKE 145 (316)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceE
Confidence 9999999999643 3489999999999999999999999 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-23 Score=207.79 Aligned_cols=143 Identities=17% Similarity=0.092 Sum_probs=121.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCC-ccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE-NTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.+..|.+++..++|+ +|+++++++...+ ..++||||
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~E~ 82 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFVMEY 82 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC--EEEEEEcC
Confidence 78999999999999987 578899999854321 1122345688899999999765 5788888887766 79999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 83 ~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~ 150 (324)
T cd05587 83 VNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKE 150 (324)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCccee
Confidence 99999999986433 489999999999999999999998 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-23 Score=198.10 Aligned_cols=147 Identities=20% Similarity=0.199 Sum_probs=130.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.+ +++.|++|.+..... ......++.+|++++++++|||++++++++...+ ..++||||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 81 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM--NRREREEAIDEARVLAKLDSSYIIRYYESFLDKG--KLNIVMEYA 81 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC--CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC--EEEEEEEeC
Confidence 78999999999999986 688999998854322 2344567999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.++++......+++.++.+++.+++.||.|||+. +++||||||+||++++++.+||+|||+++.+.+
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~ 153 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD 153 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence 999999999865445689999999999999999999998 999999999999999999999999999886543
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-23 Score=206.63 Aligned_cols=143 Identities=18% Similarity=0.156 Sum_probs=121.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.+ +|..||+|.+...... .......+..|.+++... +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~E~ 77 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE--HLFFVMEF 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC--EEEEEECC
Confidence 36999999999999997 6889999998543211 112234567788888754 8999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05620 78 LNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKE 145 (316)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCee
Confidence 99999999986443 489999999999999999999999 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.1e-23 Score=207.21 Aligned_cols=144 Identities=16% Similarity=0.074 Sum_probs=122.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||+|.+...... .......+..|..++..+ +|++|+++++++...+ ..++||||
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~E~ 82 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD--RLYFVMEY 82 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC--EEEEEEcC
Confidence 78999999999999987 5789999998543211 122334567788888777 6899999999998776 79999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 83 ~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 83 VNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 99999999986443 489999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.2e-23 Score=217.90 Aligned_cols=145 Identities=16% Similarity=0.222 Sum_probs=124.8
Q ss_pred hhhCcCCCeeEEEEEeC-C-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-G-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|++|.||+|... + +..||+|++.... ......+.+|+.+++.++|||||++++++...+ ..++||||
T Consensus 73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~----~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~--~~~lv~E~ 146 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND----ERQAAYARSELHCLAACDHFGIVKHFDDFKSDD--KLLLIMEY 146 (478)
T ss_pred EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC--EEEEEEEC
Confidence 78999999999999875 3 5678888763322 223356788999999999999999999998877 89999999
Q ss_pred CCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++|+|.++++.. ...++++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 9999999988632 234689999999999999999999998 999999999999999999999999999987643
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-23 Score=207.96 Aligned_cols=144 Identities=17% Similarity=0.207 Sum_probs=122.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC---CceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~ 439 (521)
+.||+|+||.||+|+.. ++..||+|++...... .....++.+|++++++++||||+++++++..... ...++||
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~ 83 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH--VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVF 83 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhcc--chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEE
Confidence 68999999999999986 6899999988532211 1223468899999999999999999998864331 1479999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
||++ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 84 e~~~-~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 84 ELME-SDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred ecCC-CCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9996 59999886433 489999999999999999999999 9999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=8e-23 Score=199.50 Aligned_cols=143 Identities=24% Similarity=0.277 Sum_probs=121.9
Q ss_pred hhCcCCCeeEEEEEeCC---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 365 IIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|+..+ +..+|+|.+.... .......+.+|+.++++++||||+++++++.+.. ..++||||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 76 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA---SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT--PYLLVMEF 76 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--CcEEEEEC
Confidence 58999999999998753 3568888874332 1233457899999999999999999999998776 78999999
Q ss_pred CCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.++++... ....++..+..++.|++.|++|||+. +++||||||+||++++++++||+|||+++..
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNK 150 (269)
T ss_pred CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999997422 23467888899999999999999999 9999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-23 Score=201.78 Aligned_cols=144 Identities=19% Similarity=0.327 Sum_probs=123.0
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|..+ ++..||+|++.... ......+|.+|+.+++.++||||+++++++.... ..++
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~--~~~l 86 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLV 86 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--CeEE
Confidence 78999999999999764 24679999873221 1223457899999999999999999999998776 7899
Q ss_pred EEeeCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCC
Q 009972 438 VFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~Df 509 (521)
||||+++|+|.++++... ...++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~df 163 (277)
T cd05062 87 IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 163 (277)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEECCC
Confidence 999999999999986421 13468999999999999999999998 9999999999999999999999999
Q ss_pred chhhhc
Q 009972 510 CLSFLL 515 (521)
Q Consensus 510 Gla~~~ 515 (521)
|+++.+
T Consensus 164 g~~~~~ 169 (277)
T cd05062 164 GMTRDI 169 (277)
T ss_pred CCcccc
Confidence 998754
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.4e-23 Score=199.01 Aligned_cols=143 Identities=20% Similarity=0.286 Sum_probs=124.9
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||+|+..++..||+|++..... ..+.|.+|+.++.+++||||+++++++... ..++||||+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---~~~lv~e~~ 82 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYM 82 (262)
T ss_pred eeecCCCCCCcEEEEEecCCceEEEEecccCcc-----CHHHHHHHHHHHHhCCCCCcceEEEEECCC---CcEEEEEcC
Confidence 378999999999999988777899998853221 235689999999999999999999987543 578999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++......++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||.++.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~ 153 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 153 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecc
Confidence 999999999754444689999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.5e-23 Score=202.35 Aligned_cols=147 Identities=22% Similarity=0.275 Sum_probs=120.2
Q ss_pred hhhCcCCCeeEEEEEeC--CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCccceeeeEeecC---CCCce
Q 009972 364 NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRES---SPFTR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~---~~~~~ 435 (521)
+.||+|+||.||+|+.. ++..||+|.+...... ......+.+|+.++..+ +||||++++++|... .....
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~ 84 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 84 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC--CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcE
Confidence 67999999999999874 4678999988543321 12233566777777665 699999999998531 22268
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++||||++ |+|.+++.......+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 85 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 85 TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred EEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 99999997 5999999755445689999999999999999999999 9999999999999999999999999999865
Q ss_pred c
Q 009972 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 161 ~ 161 (290)
T cd07862 161 S 161 (290)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.5e-23 Score=202.02 Aligned_cols=146 Identities=19% Similarity=0.125 Sum_probs=126.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+++.. +++.+|+|.+...... .......+.+|++++.+++|+|++++.+++...+ ..++||||+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 82 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK-KRKGESMALNEKQILEKVNSQFVVNLAYAYETKD--ALCLVLTIM 82 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh-hhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC--EEEEEEEec
Confidence 67999999999999986 6889999988543211 1223345788999999999999999999988776 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++.+
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~ 152 (285)
T cd05632 83 NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKI 152 (285)
T ss_pred cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceec
Confidence 999999988754444699999999999999999999998 9999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.9e-23 Score=224.59 Aligned_cols=146 Identities=16% Similarity=0.114 Sum_probs=126.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+|+.. +++.||+|++..... ......++|.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~-~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~--~lyLVMEY~ 84 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS-ENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD--PVYYTMPYI 84 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccc-cCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC--EEEEEEEcC
Confidence 78999999999999986 588999999853321 12334567999999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcC---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 443 SNGTLYEHLHYG---------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 443 ~~g~L~~~l~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
++|+|.+++... ....+++..+++++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 85 eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 85 EGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred CCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCcce
Confidence 999999998631 123467888999999999999999999 99999999999999999999999999998
Q ss_pred hc
Q 009972 514 LL 515 (521)
Q Consensus 514 ~~ 515 (521)
..
T Consensus 162 ~i 163 (932)
T PRK13184 162 FK 163 (932)
T ss_pred ec
Confidence 76
|
|
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.9e-23 Score=198.98 Aligned_cols=149 Identities=21% Similarity=0.304 Sum_probs=123.0
Q ss_pred hhhhCcCCCeeEEEEEeCCC-C--EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----CCce
Q 009972 363 SNIIGSSPDSLVYKGTMKGG-P--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTR 435 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~-~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~ 435 (521)
.+.||+|+||.||+|+..+. . .+|+|.+..... .....+.+.+|+++++.++||||++++++|.... ....
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC--TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccCcccCceEEEeEEccCCCeeeEEEEecccCcC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 46899999999999998643 3 588887743321 2233567899999999999999999999885422 1146
Q ss_pred EEEEeeCCCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCch
Q 009972 436 MLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGl 511 (521)
++++||+++|+|.+++... ....++|.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999999987421 223589999999999999999999998 999999999999999999999999999
Q ss_pred hhhcc
Q 009972 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
++.+.
T Consensus 159 ~~~~~ 163 (272)
T cd05075 159 SKKIY 163 (272)
T ss_pred ccccC
Confidence 98764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.2e-23 Score=201.52 Aligned_cols=140 Identities=17% Similarity=0.266 Sum_probs=116.7
Q ss_pred hhCcCCCeeEEEEEeCC-------------------------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCc
Q 009972 365 IIGSSPDSLVYKGTMKG-------------------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n 419 (521)
.||+|+||.||+|+... ...|++|.+.... .....+|.+|+.+++.++|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH----RDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH----HHHHHHHHHHHHHHhcCCCCC
Confidence 58999999999998531 1247777763221 223457889999999999999
Q ss_pred cceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 009972 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 420 iv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld 499 (521)
|++++++|.+.. ..++||||+++|+|..++.... ..+++..+.+++.|+++||+|||+. +|+||||||+|||++
T Consensus 78 iv~~~~~~~~~~--~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~ 151 (274)
T cd05076 78 LAFVHGVCVRGS--ENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLA 151 (274)
T ss_pred eeeEEEEEEeCC--ceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEe
Confidence 999999998877 7899999999999999986432 3589999999999999999999998 999999999999997
Q ss_pred CCC-------CeeeCCCchhhh
Q 009972 500 EDF-------SPKVSPLCLSFL 514 (521)
Q Consensus 500 ~~~-------~~kl~DfGla~~ 514 (521)
+++ .+|++|||+++.
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~ 173 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFT 173 (274)
T ss_pred ccCcccCccceeeecCCccccc
Confidence 644 379999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.4e-23 Score=209.41 Aligned_cols=145 Identities=22% Similarity=0.272 Sum_probs=128.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|.|++|..+++. ++.+||+|.+.....+ ....+.+.+|+++|..+.|||||+++.+..... ..|+||||+
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln--~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~--~lylV~eya 137 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLN--PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA--TLYLVMEYA 137 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhcccC--hHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc--eeEEEEEec
Confidence 67999999999999997 7899999988544332 334456899999999999999999999999887 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
.+|.+++++...++ ........+..|+..|++|+|++ .|+|||||++|||||.++++||+|||++.+++.
T Consensus 138 ~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 138 SGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred cCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc
Confidence 99999999975543 55588888999999999999999 999999999999999999999999999998764
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.1e-23 Score=201.78 Aligned_cols=147 Identities=19% Similarity=0.136 Sum_probs=127.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... +++.+|+|.+...... .......+.+|+.++++++|+|++++++.+.+.+ ..++||||+
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 82 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGESMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTLM 82 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-chHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC--EEEEEEEec
Confidence 67999999999999987 6889999988543221 1223356788999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++.++..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++....
T Consensus 83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 153 (285)
T ss_pred CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence 999999998654444689999999999999999999998 99999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=197.26 Aligned_cols=142 Identities=18% Similarity=0.316 Sum_probs=124.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
..||+|++|.||+|..+++..+|+|.+.... ...+.+.+|+.++++++|||++++++++.. + ..+++|||++
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~~v~e~~~ 83 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-----MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-E--PIYIVTEFMG 83 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCC-----ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-C--CcEEEEEcCC
Confidence 6899999999999998877789999874322 123568999999999999999999998854 3 5789999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++......++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIE 153 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEcc
Confidence 99999999755445689999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-23 Score=206.56 Aligned_cols=142 Identities=23% Similarity=0.116 Sum_probs=119.9
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCccceeeeEeecCCCCceEEEEee
Q 009972 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
||+|+||+||+|+.. +++.||+|.+..+... .......+..|..++.+. +||||+++++++...+ ..++||||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~--~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-AKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS--DLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-hhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC--eEEEEEcC
Confidence 699999999999986 6889999998543211 112233456677777665 6999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 78 MSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred CCCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 99999999986443 489999999999999999999999 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=197.49 Aligned_cols=142 Identities=20% Similarity=0.332 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|..+++..+|+|.+..... ..+.|.+|+.++++++|+|++++++++... ..+++|||++
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---~~~lv~e~~~ 83 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-----SPESFLEEAQIMKKLRHDKLVQLYAVVSEE---PIYIVTEYMS 83 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCC-----CHHHHHHHHHHHHhcCCCceEEEEeEECCC---CcEEEEEecC
Confidence 78999999999999988888899998854322 235689999999999999999999988543 5789999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++......+++.++..++.+++.||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIE 153 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeecc
Confidence 99999999754445689999999999999999999999 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=199.31 Aligned_cols=143 Identities=20% Similarity=0.285 Sum_probs=119.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCE----EEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||+|++. +++. +++|.+... .......++..|+..+++++||||+++++++... ..+++
T Consensus 13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~---~~~~i 86 (279)
T cd05111 13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR---SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA---SLQLV 86 (279)
T ss_pred cccCccCCcceEEEEEcCCCCceeeEEEEeecccc---cchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC---ccEEE
Confidence 78999999999999985 4543 556655221 1123345788899999999999999999998643 47899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.++++... ..++|..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 87 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 87 TQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 99999999999997433 3589999999999999999999998 99999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=197.19 Aligned_cols=142 Identities=25% Similarity=0.321 Sum_probs=123.1
Q ss_pred hhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|.++ ++..+|+|++.... ......+++.+|+.++++++||||+++++++... ..++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN--NDPALKDELLREANVMQQLDNPYIVRMIGICEAE---SWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC--CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CcEEEEec
Confidence 5899999999999763 56789999874332 2234456799999999999999999999998644 57899999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... .+++..+.+++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 77 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 77 AELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 99999999996433 589999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.5e-23 Score=198.20 Aligned_cols=143 Identities=17% Similarity=0.314 Sum_probs=126.5
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.++||+|+||.||+|..++++.||+|.+..... ...+|.+|+.++++++|+|++++++++.. + ..+++|||+
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~~v~e~~ 82 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-----SPEAFLAEANLMKQLQHPRLVRLYAVVTQ-E--PIYIITEYM 82 (260)
T ss_pred eeeeccCccceEEeeecCCCceEEEEEecCCCC-----cHHHHHHHHHHHHhcCCcCeeeEEEEEcc-C--CcEEEEEcC
Confidence 478999999999999998899999998853322 23568999999999999999999998754 3 589999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++.++..++.+++.||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIE 153 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence 999999999755555789999999999999999999998 99999999999999999999999999997654
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=200.27 Aligned_cols=146 Identities=21% Similarity=0.324 Sum_probs=125.8
Q ss_pred hhhCcCCCeeEEEEEeC-----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+++.. ++..||+|.+.... .......+.+|+.++++++|||++++.+++...+....++|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 86 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEE
Confidence 67999999999999852 46789999874332 12334579999999999999999999999987643468999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++++|.+++.... ..++|.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 87 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 87 MEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccc
Confidence 99999999999996432 3589999999999999999999999 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.2e-23 Score=211.48 Aligned_cols=134 Identities=12% Similarity=0.135 Sum_probs=119.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +++.||+|... ...+.+|++++++++|||||++++++.... ..++|+||+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~lv~e~~ 165 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTYNK--FTCLILPRY 165 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC--eeEEEEecC
Confidence 78999999999999986 68889998642 124678999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
. ++|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+..
T Consensus 166 ~-~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~ 232 (391)
T PHA03212 166 K-TDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFP 232 (391)
T ss_pred C-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence 6 68998886443 489999999999999999999999 9999999999999999999999999999753
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.1e-23 Score=210.23 Aligned_cols=144 Identities=19% Similarity=0.274 Sum_probs=123.4
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|++. .+..||+|++..... ....+.+.+|++++.++. |||||+++++|...+ ..+
T Consensus 43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~--~~~ 117 (401)
T cd05107 43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR---SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG--PIY 117 (401)
T ss_pred hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC---hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC--CcE
Confidence 78999999999999864 245799999853321 223456899999999997 999999999998876 789
Q ss_pred EEEeeCCCCChhhhhhcCC-------------------------------------------------------------
Q 009972 437 LVFDYASNGTLYEHLHYGE------------------------------------------------------------- 455 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~------------------------------------------------------------- 455 (521)
+||||+++|+|.++++...
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 9999999999999996421
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 009972 456 -----------------------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 456 -----------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~ 500 (521)
...++|.+..+|+.+++.||+|||+. +++||||||+|||+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~ 274 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICE 274 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEeC
Confidence 12468889999999999999999998 9999999999999999
Q ss_pred CCCeeeCCCchhhhc
Q 009972 501 DFSPKVSPLCLSFLL 515 (521)
Q Consensus 501 ~~~~kl~DfGla~~~ 515 (521)
++.+||+|||+++.+
T Consensus 275 ~~~~kL~DfGla~~~ 289 (401)
T cd05107 275 GKLVKICDFGLARDI 289 (401)
T ss_pred CCEEEEEecCcceec
Confidence 999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=199.69 Aligned_cols=144 Identities=22% Similarity=0.275 Sum_probs=123.8
Q ss_pred hhhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||++.. .++..||+|.+..... ......|.+|++++++++||||+++++++...+....++|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG---QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6899999999988754 3577899998743321 2235678899999999999999999999876543368999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++... .++|.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 87 ~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 87 MEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred ecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999999643 389999999999999999999999 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.4e-23 Score=197.81 Aligned_cols=141 Identities=18% Similarity=0.297 Sum_probs=120.0
Q ss_pred hhhCcCCCeeEEEEEeCCCC-----------EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGP-----------EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~-----------~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
+.||+|+||.||+|...+.. .+++|.+.... .....|.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~- 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-D- 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hhHHHHHHHHHHHHcCCCcchhheeeEEec-C-
Confidence 46899999999999997433 46666553221 114678999999999999999999999987 4
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-------Cee
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-------SPK 505 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-------~~k 505 (521)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 74 -~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 74 -ENIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred -CcEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEE
Confidence 67999999999999999975432 589999999999999999999998 999999999999999888 799
Q ss_pred eCCCchhhhcc
Q 009972 506 VSPLCLSFLLV 516 (521)
Q Consensus 506 l~DfGla~~~~ 516 (521)
|+|||+++.+.
T Consensus 149 l~Dfg~a~~~~ 159 (259)
T cd05037 149 LSDPGIPITVL 159 (259)
T ss_pred eCCCCcccccc
Confidence 99999988743
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=199.18 Aligned_cols=143 Identities=22% Similarity=0.285 Sum_probs=123.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||+|++. ++. .||+|.+... .......++.+|+.++..++||||+++++++... ..+++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~~~l~ 86 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN---TSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS---TVQLV 86 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCC---CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC---CcEEE
Confidence 78999999999999864 454 4788887432 1233456789999999999999999999999764 46899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.++++... ..+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 87 ~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 87 TQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 99999999999997433 3589999999999999999999999 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=196.60 Aligned_cols=143 Identities=23% Similarity=0.364 Sum_probs=127.2
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++.+.+ ..++||||+
T Consensus 11 ~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 82 (256)
T cd05039 11 GATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN--PLYIVTEYM 82 (256)
T ss_pred eeeeecCCCceEEEEEec-CcEEEEEEeccchh-----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC--CeEEEEEec
Confidence 378999999999999875 68899998843321 3467899999999999999999999998766 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......++|..+..++.+++.||.|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~ 153 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEAS 153 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccc
Confidence 999999999765544689999999999999999999999 99999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=198.93 Aligned_cols=145 Identities=21% Similarity=0.253 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCC----CCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS----PFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~----~~~~~l 437 (521)
+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.++.++ +||||+++++++.... ....++
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 86 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 86 (272)
T ss_pred HheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence 78999999999999986 57889999875332 1235688999999998 7999999999987532 125799
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||||+++|+|.+++.......++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~ 162 (272)
T cd06637 87 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 162 (272)
T ss_pred EEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999999754445689999999999999999999998 99999999999999999999999999998654
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=196.49 Aligned_cols=143 Identities=22% Similarity=0.378 Sum_probs=128.0
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|..+++..+|+|.+..... ..+++.+|+.++++++|+||+++++++.... ..++||||++
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~~ 84 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE--PIYIVTEYMS 84 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCcc-----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCC--ceEEEEeccC
Confidence 78999999999999988888899998753221 2356899999999999999999999998766 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++|.+++.......+++.++..++.+++.|++|||+. +++|+||||+||++++++.+||+|||+++.+.
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 154 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIE 154 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceecc
Confidence 99999999765545689999999999999999999999 99999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=202.98 Aligned_cols=142 Identities=21% Similarity=0.241 Sum_probs=123.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.+ +++.||+|.+...... .....+.+|+.++++++||||+++++++..++ ..++||||+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 86 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIVHTDK--SLTLVFEYL 86 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccC---CcchhHHHHHHHHHhCCCCCcceEEEEEeeCC--eEEEEEeCC
Confidence 68999999999999987 6788999988543221 22345788999999999999999999998877 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 87 ~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 87 DK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK 154 (309)
T ss_pred CC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceec
Confidence 85 8888886433 3578999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.6e-23 Score=206.67 Aligned_cols=146 Identities=18% Similarity=0.235 Sum_probs=122.6
Q ss_pred hhhhCcCCCeeEEEEEe------CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 363 SNIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+.||+|+||.||+|+. .+++.||||++.... .......+.+|+.++.++ +||||++++++|...+. ..
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~-~~ 87 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PL 87 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCC---ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC-ce
Confidence 37899999999999974 246789999985332 122345688999999999 78999999998875442 57
Q ss_pred EEEEeeCCCCChhhhhhcCC------------------------------------------------------------
Q 009972 436 MLVFDYASNGTLYEHLHYGE------------------------------------------------------------ 455 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~------------------------------------------------------------ 455 (521)
++||||+++|+|.++++...
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999986321
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 456 -----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 456 -----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
...++|.++.+++.|++.||+|||+. +|+||||||+||++++++++||+|||+++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~ 229 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI 229 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEeccccccc
Confidence 12478899999999999999999999 9999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=202.11 Aligned_cols=144 Identities=17% Similarity=0.176 Sum_probs=125.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. ++..+|+|.+.... ......++.+|++++.+++||||+++++++..++ ..++||||+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ey~ 81 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEI---KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG--EISICMEHM 81 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--EEEEEeecc
Confidence 78999999999999986 57788888774321 1234456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++.. ..+++..+..++.|+++||+|||+.+ +++||||||+||++++++.+||+|||+++.+.
T Consensus 82 ~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 151 (308)
T cd06615 82 DGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 151 (308)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence 999999999744 35899999999999999999999732 89999999999999999999999999987654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.89 E-value=9e-23 Score=201.29 Aligned_cols=144 Identities=18% Similarity=0.316 Sum_probs=122.3
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|..++ +..||+|.+.... .......+.+|+.++++++||||+++++++.... ..++
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~l 86 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ--PTLV 86 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--CcEE
Confidence 789999999999997642 4579999874221 1223456889999999999999999999998776 7899
Q ss_pred EEeeCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCC
Q 009972 438 VFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~Df 509 (521)
||||+++|+|.++++... ....++..+.+++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~Df 163 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDF 163 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEECcC
Confidence 999999999999996421 23457888999999999999999998 9999999999999999999999999
Q ss_pred chhhhc
Q 009972 510 CLSFLL 515 (521)
Q Consensus 510 Gla~~~ 515 (521)
|+++.+
T Consensus 164 g~~~~~ 169 (288)
T cd05061 164 GMTRDI 169 (288)
T ss_pred Cccccc
Confidence 998854
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=197.66 Aligned_cols=145 Identities=26% Similarity=0.331 Sum_probs=125.2
Q ss_pred hhhhCcCCCeeEEEEEeC-C---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 363 SNIIGSSPDSLVYKGTMK-G---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~-~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|+.. + +..+|+|.+.... .....+.|.+|+.++.+++||||+++++++...+ ..++|
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 83 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK--PVMIV 83 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--ccEEE
Confidence 378999999999999874 2 2368888874322 2234567899999999999999999999998776 78999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..|+.+++.||+|||+. +++||||||+||++++++.+|++|||+++.+.
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 99999999999997543 3589999999999999999999998 99999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.2e-23 Score=207.46 Aligned_cols=149 Identities=22% Similarity=0.291 Sum_probs=128.5
Q ss_pred hhhhhCcCCCeeEEEEEeCC---CC--EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 362 FSNIIGSSPDSLVYKGTMKG---GP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~~---~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
..++||.|-||.||+|.+.+ |. .||||.-+. +.+....+.|..|..+|++++|||||+|+|+|.+. ..+
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~---d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~---P~W 466 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKT---DCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ---PMW 466 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhcc---CCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc---cee
Confidence 34799999999999998843 33 467775422 23344577899999999999999999999999875 489
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|||.++.|.|.+||+.++ ..|+..+...++.|++.||+|||+. ++|||||..+|||+...-.+|++|||++|.++
T Consensus 467 ivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred EEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 9999999999999998443 4689999999999999999999999 99999999999999999999999999999988
Q ss_pred cccc
Q 009972 517 SSII 520 (521)
Q Consensus 517 ~~~~ 520 (521)
+.++
T Consensus 543 d~~y 546 (974)
T KOG4257|consen 543 DDAY 546 (974)
T ss_pred ccch
Confidence 7543
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.7e-23 Score=199.04 Aligned_cols=150 Identities=19% Similarity=0.199 Sum_probs=127.0
Q ss_pred HHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC
Q 009972 356 EVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 356 ~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
+.+++++. ..||+|+||.||+|+.. ++..|++|.+..+. ....+.+.+|+.++++++|+||+++++++...+
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~- 78 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD----SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG- 78 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC----HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC-
Confidence 34445554 68999999999999976 57789999875432 123457899999999999999999999998876
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeeeCCC
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPL 509 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-~~~~kl~Df 509 (521)
..++|+||+++++|.++++... ..+ ++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 79 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 79 -FFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred -EEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecc
Confidence 8999999999999999997432 234 8888999999999999999998 9999999999999986 679999999
Q ss_pred chhhhc
Q 009972 510 CLSFLL 515 (521)
Q Consensus 510 Gla~~~ 515 (521)
|++..+
T Consensus 154 g~~~~~ 159 (268)
T cd06624 154 GTSKRL 159 (268)
T ss_pred hhheec
Confidence 998764
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=203.34 Aligned_cols=144 Identities=17% Similarity=0.151 Sum_probs=124.4
Q ss_pred hhhhCcC--CCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 363 SNIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 363 ~~~lg~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
.++||+| +|++||+++.+ +|+.||+|++..... .....+.+.+|+++++.++||||+++++++..++ ..++||
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~--~~~lv~ 78 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC--TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVVT 78 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhc--cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC--EEEEEE
Confidence 3689999 67899999886 789999999854321 1233456788999999999999999999998877 899999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++|||.+.
T Consensus 79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 999999999999644344589999999999999999999998 99999999999999999999999998644
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=196.95 Aligned_cols=147 Identities=20% Similarity=0.245 Sum_probs=127.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+.... .........+.+|+++++.++||||+++++++...+ ..++|+||+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 84 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFE-MMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN--ELNIVLELA 84 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccc-cCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC--eEEEEEEec
Confidence 78999999999999986 78899999875432 222344567899999999999999999999998776 789999999
Q ss_pred CCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. .....+++..+..++.+++.||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 85 DAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred CCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 99999998853 2234578999999999999999999998 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=204.99 Aligned_cols=145 Identities=21% Similarity=0.239 Sum_probs=128.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|.||.||+++.+ +|+.+|+|.+.++... .......+.+|+.+|+++. |||||.+.+.+++.. ..++|||+
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~-~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~--~~~lvmEL 117 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLR-GKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD--SVYLVMEL 117 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhcc-ccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC--eEEEEEEe
Confidence 78999999999999998 4999999998554322 2224467899999999998 999999999999988 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC----CCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~----~~~~kl~DfGla~~~~~ 517 (521)
+.+|.|.+.+... .+++.+...++.+++.++.|||+. +|+||||||+|+|+.. ++.+|++|||+|+....
T Consensus 118 ~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 118 CEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred cCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 9999999999755 289999999999999999999998 9999999999999963 35799999999998765
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=205.03 Aligned_cols=145 Identities=19% Similarity=0.247 Sum_probs=122.2
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|+.++.++ +|+||++++++|..... ..+
T Consensus 13 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~-~~~ 88 (337)
T cd05054 13 KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT---ASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG-PLM 88 (337)
T ss_pred cccccCcCceEEeccccccccccccceeeeeeccCCCC---HHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC-CEE
Confidence 78999999999999753 247899998843221 12335678899999999 89999999998875432 688
Q ss_pred EEEeeCCCCChhhhhhcCC-----------------------------------------------------------CC
Q 009972 437 LVFDYASNGTLYEHLHYGE-----------------------------------------------------------RC 457 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~-----------------------------------------------------------~~ 457 (521)
+++||+++|+|.+++.... ..
T Consensus 89 ~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (337)
T cd05054 89 VIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKE 168 (337)
T ss_pred EEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhc
Confidence 9999999999999985321 12
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 458 QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 458 ~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|..+.+++.+|+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 169 ~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~ 223 (337)
T cd05054 169 PLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI 223 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhc
Confidence 689999999999999999999999 9999999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-22 Score=196.43 Aligned_cols=142 Identities=18% Similarity=0.210 Sum_probs=125.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++..+.. .....+.+|+.++.+++||||+++++++...+ ..++|+||+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~--~~~iv~e~~ 88 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG----DDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE--KLWICMEYC 88 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCcc----chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--EEEEEEeCC
Confidence 78999999999999985 678899998854321 12345789999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 89 GGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKIT 157 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeec
Confidence 9999999986433 589999999999999999999998 99999999999999999999999999988654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=198.02 Aligned_cols=144 Identities=25% Similarity=0.418 Sum_probs=124.0
Q ss_pred hhhCcCCCeeEEEEEeCCC------CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMKGG------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|...+. ..||+|.+.... ......+|.+|+.++.+++||||+++++++.... ..++
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~~~ 85 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA---EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ--PTCM 85 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC---CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC--ceEE
Confidence 7899999999999987532 468888874322 2234567999999999999999999999998776 7899
Q ss_pred EEeeCCCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 009972 438 VFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~ 503 (521)
+|||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCCc
Confidence 9999999999999964311 3588999999999999999999999 9999999999999999999
Q ss_pred eeeCCCchhhhc
Q 009972 504 PKVSPLCLSFLL 515 (521)
Q Consensus 504 ~kl~DfGla~~~ 515 (521)
+||+|||+++..
T Consensus 163 ~~L~dfg~~~~~ 174 (283)
T cd05048 163 VKISDFGLSRDI 174 (283)
T ss_pred EEECCCcceeec
Confidence 999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=200.71 Aligned_cols=145 Identities=23% Similarity=0.306 Sum_probs=123.5
Q ss_pred hhhCcCCCeeEEEEEeCC---------------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEee
Q 009972 364 NIIGSSPDSLVYKGTMKG---------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~---------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 428 (521)
+.||+|+||.||+++..+ ...||+|.+... ........|.+|++++.+++|+|++++++++.
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~ 87 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD---VTKTARNDFLKEIKIMSRLKNPNIIRLLGVCV 87 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC---CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEc
Confidence 789999999999997643 124888887432 12334567999999999999999999999998
Q ss_pred cCCCCceEEEEeeCCCCChhhhhhcCC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 009972 429 ESSPFTRMLVFDYASNGTLYEHLHYGE----------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~~g~L~~~l~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl 498 (521)
..+ ..++||||+++++|.+++.... ...++|.++..++.+++.||+|||+. +++||||||+||++
T Consensus 88 ~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nill 162 (295)
T cd05097 88 SDD--PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCLV 162 (295)
T ss_pred CCC--ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEEE
Confidence 876 7899999999999999986321 12478999999999999999999999 99999999999999
Q ss_pred cCCCCeeeCCCchhhhcc
Q 009972 499 TEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 499 d~~~~~kl~DfGla~~~~ 516 (521)
++++.+||+|||+++.+.
T Consensus 163 ~~~~~~kl~dfg~~~~~~ 180 (295)
T cd05097 163 GNHYTIKIADFGMSRNLY 180 (295)
T ss_pred cCCCcEEecccccccccc
Confidence 999999999999997653
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=200.37 Aligned_cols=144 Identities=24% Similarity=0.368 Sum_probs=121.9
Q ss_pred hhhhCcCCCeeEEEEEeC-CCCE--EEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEE
Q 009972 363 SNIIGSSPDSLVYKGTMK-GGPE--IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~-~~~~--vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|+.+ ++.. +++|.+.. .........+.+|++++.++ +||||+++++++...+ ..++|
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~---~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~--~~~lv 86 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLA 86 (303)
T ss_pred eeeecCCCCceEEEEEEccCCceeeEEEEEecc---cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC--CceEE
Confidence 378999999999999985 4543 46665532 11223456789999999999 8999999999998876 78999
Q ss_pred EeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCe
Q 009972 439 FDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~ 504 (521)
+||+++|+|.++++... ...+++.++..++.|++.|++|||+. +++||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 99999999999997432 12578999999999999999999998 99999999999999999999
Q ss_pred eeCCCchhhh
Q 009972 505 KVSPLCLSFL 514 (521)
Q Consensus 505 kl~DfGla~~ 514 (521)
||+|||+++.
T Consensus 164 kl~dfg~~~~ 173 (303)
T cd05088 164 KIADFGLSRG 173 (303)
T ss_pred EeCccccCcc
Confidence 9999999864
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-22 Score=194.45 Aligned_cols=142 Identities=23% Similarity=0.310 Sum_probs=123.1
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||++..+ |..+|+|.+... ...+.|.+|+.++++++|+|++++++++...+. ..++++||++
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~~lv~e~~~ 83 (256)
T cd05082 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMA 83 (256)
T ss_pred eeecccCCCeEEEEEEc-CCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC-ceEEEEECCC
Confidence 78999999999999875 667899987322 123568999999999999999999998654321 6899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++......++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 153 (256)
T cd05082 84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecc
Confidence 99999999765555689999999999999999999998 99999999999999999999999999988643
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=198.63 Aligned_cols=145 Identities=26% Similarity=0.339 Sum_probs=124.4
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+..+ +..||+|.+..+. .....+.|.+|+.++..++||||+++++++.... ..++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--~~~~ 85 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA---EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ--PLSM 85 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC--ceEE
Confidence 789999999999998742 4679999885332 1233467899999999999999999999998877 7899
Q ss_pred EEeeCCCCChhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 009972 438 VFDYASNGTLYEHLHYG--------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~ 503 (521)
++||+++++|.+++..+ ....+++..+.+++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 99999999999998521 123488999999999999999999998 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009972 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+++.+.
T Consensus 163 ~kl~Dfg~~~~~~ 175 (283)
T cd05091 163 VKISDLGLFREVY 175 (283)
T ss_pred eEecccccccccc
Confidence 9999999988653
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-22 Score=195.62 Aligned_cols=147 Identities=19% Similarity=0.226 Sum_probs=128.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... +++.+|+|.+..... .......++.+|+.+++.++||||+++++++...+ ..+++|||+
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~v~e~~ 84 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVLELA 84 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhh-hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC--eEEEEEEec
Confidence 78999999999999975 788999998754321 22334567899999999999999999999998776 789999999
Q ss_pred CCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.. .....++|.++..++.+++.||+|||+. +++|+||||+||+++.++.++|+|||+++.+.
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 85 DAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred CCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 99999999863 2234589999999999999999999999 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-22 Score=195.79 Aligned_cols=144 Identities=25% Similarity=0.358 Sum_probs=125.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCC---EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGP---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. ++. .+|+|++.... .....+.+.+|++++.+++|||++++.+++...+ ..++||
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 85 (268)
T cd05063 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY---TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK--PAMIIT 85 (268)
T ss_pred eEecCCCCccEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC--CcEEEE
Confidence 78999999999999986 333 68888874332 1233567899999999999999999999998877 789999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.++++... ..++|.++..++.+++.|++|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 86 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 86 EYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999997433 3589999999999999999999998 99999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-22 Score=195.79 Aligned_cols=143 Identities=15% Similarity=0.261 Sum_probs=119.2
Q ss_pred hhhCcCCCeeEEEEEeCCC-------------CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC
Q 009972 364 NIIGSSPDSLVYKGTMKGG-------------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~-------------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
+.||+|+||.||+|+..+. ..|++|.+.... ......|.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH----RDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 3689999999999986421 247777653321 22345788999999999999999999999877
Q ss_pred CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC-------
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS------- 503 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~------- 503 (521)
. ..++||||+++|+|..+++... ..+++..+.+++.|+++||+|||+. +|+||||||+|||++.++.
T Consensus 77 ~--~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 77 V--ENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred C--CCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCce
Confidence 6 7899999999999999886433 3589999999999999999999999 9999999999999987664
Q ss_pred eeeCCCchhhhcc
Q 009972 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+|++|||++..+.
T Consensus 151 ~~l~d~g~~~~~~ 163 (262)
T cd05077 151 IKLSDPGIPITVL 163 (262)
T ss_pred eEeCCCCCCcccc
Confidence 8999999987543
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=200.58 Aligned_cols=144 Identities=19% Similarity=0.260 Sum_probs=124.8
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||++... ++..||+|.+..... ....+.+.+|+.+++++ +||||+++++++...+ ..+
T Consensus 41 ~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~ 115 (302)
T cd05055 41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH---SSEREALMSELKIMSHLGNHENIVNLLGACTIGG--PIL 115 (302)
T ss_pred ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC---hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC--ceE
Confidence 78999999999999752 345789998743321 23345789999999999 8999999999998776 789
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+||||+++|+|.++++......+++.++..++.+++.||+|||+. +|+|+||||+|||+++++.+|++|||+++.+
T Consensus 116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 999999999999999754444589999999999999999999998 9999999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-22 Score=196.36 Aligned_cols=145 Identities=25% Similarity=0.335 Sum_probs=126.0
Q ss_pred hhhhCcCCCeeEEEEEeCC-C---CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 363 SNIIGSSPDSLVYKGTMKG-G---PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~-~---~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|+... + ..||+|.+.... .....++|..|+.++++++||||+++++++.... ..++|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~lv 83 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR--PVMII 83 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC--ceEEE
Confidence 4789999999999999863 3 369999874321 2334567999999999999999999999998776 78999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 84 TEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 99999999999997443 3589999999999999999999998 99999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=195.40 Aligned_cols=145 Identities=23% Similarity=0.293 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeCC--C--CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG--G--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~--~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|++|.||+|.+.+ + ..||+|.+...... ...+.+.+|+.++++++||||+++++++.. . ..++|+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~--~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS---DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H--PLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH---HHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--eEEEEE
Confidence 468999999999998853 3 36899987443221 455689999999999999999999999987 4 789999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.......++|.....++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+..
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQ 149 (257)
T ss_pred EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccc
Confidence 999999999999754324689999999999999999999999 999999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=200.18 Aligned_cols=146 Identities=23% Similarity=0.287 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||++...+ ...+|+|.+.... ......++.+|+.++.++ +|+||+++++++...+ ..+
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~ 92 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG--PLY 92 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCC---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC--CeE
Confidence 789999999999998742 3578998874321 122345688999999999 8999999999998876 789
Q ss_pred EEEeeCCCCChhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 009972 437 LVFDYASNGTLYEHLHYG--------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~ 502 (521)
++|||+++|+|.++++.. ....++|..+++++.|++.||+|||+. +|+||||||+||++++++
T Consensus 93 li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~~~ 169 (293)
T cd05053 93 VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTEDH 169 (293)
T ss_pred EEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcCCC
Confidence 999999999999998632 234689999999999999999999998 999999999999999999
Q ss_pred CeeeCCCchhhhccc
Q 009972 503 SPKVSPLCLSFLLVS 517 (521)
Q Consensus 503 ~~kl~DfGla~~~~~ 517 (521)
.+||+|||+++.+..
T Consensus 170 ~~kL~Dfg~~~~~~~ 184 (293)
T cd05053 170 VMKIADFGLARDIHH 184 (293)
T ss_pred eEEeCcccccccccc
Confidence 999999999987643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-22 Score=194.83 Aligned_cols=148 Identities=18% Similarity=0.175 Sum_probs=125.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|... ++..||+|.+...... ......+.+.+|+.++.+++||||+++++++.+......+++|||
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~ 87 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEH 87 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEe
Confidence 78999999999999986 5889999987543221 112234578899999999999999999998876543367899999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... .+++....+++.+++.||+|||+. +++|+||||+||++++++.+||+|||+++.+.
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 88 MPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 99999999986433 478899999999999999999999 99999999999999999999999999987643
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=221.01 Aligned_cols=145 Identities=19% Similarity=0.159 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|++..... ........+.+|+.++..++||||+++++++.... ..++||||+
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lVmEy~ 86 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM-INKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN--NVYLVMEYL 86 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhc-cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC--EEEEEEeCC
Confidence 78999999999999997 688999999854322 22334567899999999999999999999988776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++... .+++.....|+.||+.||+|||.. +|+||||||+|||++.++.+||+|||+++...
T Consensus 87 ~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~ 155 (669)
T cd05610 87 IGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL 155 (669)
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence 9999999996433 478999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-22 Score=206.58 Aligned_cols=145 Identities=17% Similarity=0.130 Sum_probs=122.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC---CceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~ 439 (521)
+.||+|+||.||+++.. +++.||+|++..... .....+++.+|+++++.++||||+++++++..... ...++|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 83 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ--NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVT 83 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEecccccc--chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEe
Confidence 68999999999999985 789999998843221 12234578899999999999999999999876431 1579999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||++ ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 84 e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 84 ELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred eccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9997 4888888543 3589999999999999999999999 99999999999999999999999999998643
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-22 Score=195.01 Aligned_cols=149 Identities=25% Similarity=0.347 Sum_probs=124.6
Q ss_pred hhhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----Cc
Q 009972 363 SNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FT 434 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~ 434 (521)
.+.||+|+||.||+|+... +..||+|++..... .......+.+|++.++.++||||+++++++..... ..
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH--TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 3689999999999998752 36799998854322 22334578999999999999999999999865441 13
Q ss_pred eEEEEeeCCCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCc
Q 009972 435 RMLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 435 ~~lv~ey~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfG 510 (521)
.++++||+++|+|.+++... ....+++.....++.|++.||+|||+. +++||||||+||++++++.+||+|||
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCcc
Confidence 79999999999999998532 223589999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcc
Q 009972 511 LSFLLV 516 (521)
Q Consensus 511 la~~~~ 516 (521)
+++.+.
T Consensus 159 ~~~~~~ 164 (273)
T cd05035 159 LSKKIY 164 (273)
T ss_pred ceeecc
Confidence 998654
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-22 Score=200.98 Aligned_cols=143 Identities=20% Similarity=0.273 Sum_probs=119.1
Q ss_pred hhhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
..||+|+||+||+|+.. +++.+|+|.+.... ....+.+|+.++++++||||+++++++........+++||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC------CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 68999999999999875 45789999874321 1235788999999999999999999986544346899999
Q ss_pred eCCCCChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeeeCCC
Q 009972 441 YASNGTLYEHLHYG-------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKVSPL 509 (521)
Q Consensus 441 y~~~g~L~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl----d~~~~~kl~Df 509 (521)
|+++ +|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9975 888887521 123589999999999999999999999 99999999999999 45689999999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+|+.+.
T Consensus 157 G~a~~~~ 163 (317)
T cd07868 157 GFARLFN 163 (317)
T ss_pred CceeccC
Confidence 9998764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-22 Score=193.26 Aligned_cols=146 Identities=14% Similarity=0.147 Sum_probs=128.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||.++.. ++..+++|.+...... ....+++.+|++++++++|+||+++++++.+.+ ..+++|||+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~~~e~~ 81 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS--EKERRDALNEIVILSLLQHPNIIAYYNHFMDDN--TLLIEMEYA 81 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccc--hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC--eEEEEEEec
Confidence 68999999999999875 6888999988554322 234567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~ 152 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILG 152 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence 999999999755445689999999999999999999998 99999999999999999999999999988653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-22 Score=197.37 Aligned_cols=145 Identities=23% Similarity=0.360 Sum_probs=125.6
Q ss_pred hhhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 363 SNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
.+.||+|+||.||+|+..+ +..||+|.+..... ....+.|.+|++++.+++||||+++++++.... ..+
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~ 84 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS---NDARKDFEREAELLTNFQHENIVKFYGVCTEGD--PPI 84 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC---HHHHHHHHHHHHHHHhcCCCCchheeeEEecCC--CeE
Confidence 3789999999999998743 46899998743221 224568999999999999999999999998876 799
Q ss_pred EEEeeCCCCChhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCe
Q 009972 437 LVFDYASNGTLYEHLHYGE------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~ 504 (521)
+||||+++|+|.++++... ...+++.++..++.+++.|++|||+. +++||||||+||++++++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999996432 23588999999999999999999999 99999999999999999999
Q ss_pred eeCCCchhhhc
Q 009972 505 KVSPLCLSFLL 515 (521)
Q Consensus 505 kl~DfGla~~~ 515 (521)
||+|||+++.+
T Consensus 162 kl~d~g~~~~~ 172 (280)
T cd05049 162 KIGDFGMSRDV 172 (280)
T ss_pred EECCcccceec
Confidence 99999998754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-22 Score=197.20 Aligned_cols=143 Identities=22% Similarity=0.332 Sum_probs=123.5
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||+||++... ++..+|+|.+.... ....+.+.+|++++.+++||||+++++++...+ ..++
T Consensus 11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 84 (288)
T cd05093 11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--PLIM 84 (288)
T ss_pred cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--ccEE
Confidence 78999999999999852 24568888774321 234567999999999999999999999998776 7899
Q ss_pred EEeeCCCCChhhhhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeee
Q 009972 438 VFDYASNGTLYEHLHYGE-----------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKV 506 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl 506 (521)
||||+++|+|.++++... ...++|.++..++.|++.||+|||+. +++||||||+||++++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEe
Confidence 999999999999986321 13489999999999999999999998 9999999999999999999999
Q ss_pred CCCchhhhc
Q 009972 507 SPLCLSFLL 515 (521)
Q Consensus 507 ~DfGla~~~ 515 (521)
+|||+++.+
T Consensus 162 ~dfg~~~~~ 170 (288)
T cd05093 162 GDFGMSRDV 170 (288)
T ss_pred ccCCccccc
Confidence 999999855
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-22 Score=196.32 Aligned_cols=139 Identities=17% Similarity=0.173 Sum_probs=122.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+|+.. +++.||+|.+.... .....+++.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 81 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDI---TVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN--RISICTEFM 81 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCC---ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC--EEEEEEecC
Confidence 68999999999999885 68899999874321 2234467999999999999999999999998877 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|..+. .+++.....++.+++.||+|||+. +|+|+||||+||+++.++.+||+|||+++.+.
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~ 146 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV 146 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecc
Confidence 999997653 368889999999999999999999 99999999999999999999999999997654
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-22 Score=194.25 Aligned_cols=146 Identities=19% Similarity=0.219 Sum_probs=126.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc-chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW-TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|++|.||+|... +++.+|+|.+....... .....+.+.+|++++.+++||||+++++++.... ..++|+||
T Consensus 8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~ 85 (263)
T cd06625 8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE--TLSIFMEY 85 (263)
T ss_pred ceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC--eEEEEEEE
Confidence 78999999999999885 68899999885443211 1223457899999999999999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++++|.+++.... .+++..+..++.+++.||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 86 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 86 MPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred CCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 99999999986433 488999999999999999999999 99999999999999999999999999987543
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=195.68 Aligned_cols=143 Identities=14% Similarity=0.261 Sum_probs=126.0
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||++...++..+|+|.+.... ...+.|.+|+.++++++|+||+++.+++.. . ..+++|||+
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--~~~~v~e~~ 82 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIITEFM 82 (260)
T ss_pred EeEecCccceEEEEEEecCCccEEEEecCCCh-----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C--CeEEEEEeC
Confidence 47899999999999998887889999874321 224578999999999999999999999877 4 689999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......++|.++..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 153 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeecc
Confidence 999999999765445689999999999999999999998 99999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-22 Score=209.92 Aligned_cols=136 Identities=13% Similarity=0.109 Sum_probs=119.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||.||+|+.+ .++.||+|.... ..+.+|++++++++|+|||++++++...+ ..++||||+
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~--~~~lv~e~~ 242 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWY----------ASSVHEARLLRRLSHPAVLALLDVRVVGG--LTCLVLPKY 242 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEecccc----------cCHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEEEcc
Confidence 67999999999999997 578899985311 23678999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
. |+|.+++.... ..++|.++..|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 243 ~-~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 243 R-SDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFAR 311 (461)
T ss_pred C-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence 5 69999886432 3689999999999999999999999 99999999999999999999999999998654
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-22 Score=194.23 Aligned_cols=145 Identities=21% Similarity=0.238 Sum_probs=127.0
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccc--cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|...+++.+|+|.+..+... ........+.+|++++++++|+||+++++++.+.+ ..+++|||
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 83 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN--TISIFMEF 83 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC--eEEEEEec
Confidence 679999999999999888899999988644321 11223356899999999999999999999998876 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||+++.+
T Consensus 84 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 84 VPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 99999999996433 488999999999999999999998 9999999999999999999999999998865
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.9e-22 Score=194.24 Aligned_cols=142 Identities=18% Similarity=0.152 Sum_probs=124.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..+++|.+.... ....+.+.+|+++++.++|||++++++++...+ ..++|+||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--~~~~v~e~~ 84 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKS----EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN--NLWILIEFC 84 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCC----HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC--EEEEEEEec
Confidence 67999999999999987 46778888874322 223457889999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++... ..+++|..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 85 ~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 85 AGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred CCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence 999999988643 23689999999999999999999998 9999999999999999999999999998754
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.6e-24 Score=219.14 Aligned_cols=145 Identities=23% Similarity=0.309 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEe-CCC----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTM-KGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+||+|+||+||||.+ +.| .+||+|.+... ...+...++.+|+-+|++++|||+++|+|+|..+. ..||
T Consensus 702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~---t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~---~qlv 775 (1177)
T KOG1025|consen 702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF---TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST---LQLV 775 (1177)
T ss_pred ceeccccceeEEeeeEecCCceecceeEEEEeecc---CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch---HHHH
Confidence 7899999999999987 344 36888877432 22344568999999999999999999999998764 7899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
++||+.|+|.++++..+ ..+.-...+.|..|||+||.|||.+ ++|||||.++|||+.+-..+||.|||+|+++.+.
T Consensus 776 tq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 99999999999998543 4688889999999999999999999 9999999999999999999999999999998754
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-22 Score=192.57 Aligned_cols=142 Identities=25% Similarity=0.324 Sum_probs=122.8
Q ss_pred hhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||.||+|++.. +..+|+|.+...... ...+++.+|+.+++.++|+||+++++++... ..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA---AGKKEFLREASVMAQLDHPCIVRLIGVCKGE---PLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC---ceEEEE
Confidence 469999999999998742 268999987543221 3456789999999999999999999988644 579999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~ 146 (257)
T cd05060 75 ELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALG 146 (257)
T ss_pred EeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceee
Confidence 9999999999997543 589999999999999999999998 99999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-22 Score=193.60 Aligned_cols=145 Identities=24% Similarity=0.316 Sum_probs=121.1
Q ss_pred hhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+..+ ...+|+|++.... .....+.+.+|+.+++.++||||+++++++...+. ..++|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT---DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG-SPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC---CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC-CcEEEE
Confidence 468999999999998742 3468999873221 12334678899999999999999999998865432 578999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +++||||||+|||+++++.+||+|||+++.+.
T Consensus 77 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~ 149 (262)
T cd05058 77 PYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIY 149 (262)
T ss_pred ecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCcccccccc
Confidence 9999999999997433 2468888999999999999999998 99999999999999999999999999997543
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-23 Score=206.98 Aligned_cols=146 Identities=18% Similarity=0.206 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||.|+||.||-++.. +...||||++.-..++ .....+++..|++.|..++|||+|.+-|+|..+. ..|||||||
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQ-s~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~--TaWLVMEYC 108 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH--TAWLVMEYC 108 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccc-cHHHHHHHHHHHHHHHhccCCCcccccceeeccc--hHHHHHHHH
Confidence 57999999999999986 6788999998654433 2234567999999999999999999999998877 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
-+ +-.+++.-. ..++.+-.+..|+.|+.+||+|||+. +.||||||+.||||++.|.+|++|||.|.++.+
T Consensus 109 lG-SAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 109 LG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred hc-cHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 65 777776422 23689999999999999999999999 999999999999999999999999999988765
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-22 Score=193.34 Aligned_cols=142 Identities=24% Similarity=0.386 Sum_probs=120.6
Q ss_pred hhhCcCCCeeEEEEEeCC-CC--EEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG-GP--EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||.||+|+..+ +. .+++|.+... ......+.+.+|++++.++ +||||+++++++...+ ..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY---ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc---CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC--CceEEE
Confidence 468999999999999864 44 4577766321 1223445789999999999 8999999999998876 789999
Q ss_pred eeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCee
Q 009972 440 DYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~k 505 (521)
||+++|+|.++++... ...+++.++..++.+++.||+|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 9999999999996422 12478999999999999999999998 999999999999999999999
Q ss_pred eCCCchhh
Q 009972 506 VSPLCLSF 513 (521)
Q Consensus 506 l~DfGla~ 513 (521)
|+|||+++
T Consensus 153 l~dfgl~~ 160 (270)
T cd05047 153 IADFGLSR 160 (270)
T ss_pred ECCCCCcc
Confidence 99999985
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-22 Score=196.41 Aligned_cols=144 Identities=22% Similarity=0.321 Sum_probs=123.4
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+.. ++..+++|.+... .....+.+.+|++++++++|+||+++++++.... ..++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 84 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD--PLIM 84 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC--ceEE
Confidence 78999999999999853 3456888876322 1233467899999999999999999999998876 7899
Q ss_pred EEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 009972 438 VFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~ 503 (521)
||||+++|+|.+++.... ...++|..+.+++.+++.|++|||+. +|+||||||+||++++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999996421 13489999999999999999999999 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009972 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+++...
T Consensus 162 ~~l~dfg~a~~~~ 174 (291)
T cd05094 162 VKIGDFGMSRDVY 174 (291)
T ss_pred EEECCCCcccccC
Confidence 9999999997653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-22 Score=193.75 Aligned_cols=148 Identities=20% Similarity=0.241 Sum_probs=128.8
Q ss_pred hhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|+||.||+|... +|+.+|+|.+..... ......+.+.+|++++++++|+|++++++++...+ ..++||||
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~ 83 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM-MDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN--ELNIVLEL 83 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccc-cchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEEEec
Confidence 378999999999999997 789999998854322 12233567899999999999999999999998876 78999999
Q ss_pred CCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.. .....+++.++..++.++++||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 999999999863 2234589999999999999999999999 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-22 Score=196.03 Aligned_cols=145 Identities=19% Similarity=0.256 Sum_probs=125.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|++|.||+|+.+ +++.||+|++...... ....+.+.+|+.++++++|||++++++++.... ..++||||+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~v~e~~ 82 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD--PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR--KLHLVFEYC 82 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccC--ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC--EEEEEEecc
Confidence 67999999999999987 6889999988543211 123456889999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++.|..++.... .++|..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+..
T Consensus 83 ~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 83 DHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred CccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 9988888775332 489999999999999999999998 999999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-22 Score=192.17 Aligned_cols=146 Identities=28% Similarity=0.443 Sum_probs=128.0
Q ss_pred hhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+... +..+++|.+...... ...+.+.+|++.+..++|+|++++++++.... ..++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE---EERKDFLKEARVMKKLGHPNVVRLLGVCTEEE--PLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch---hHHHHHHHHHHHHhhcCCCChheeeeeecCCC--ceEEEE
Confidence 469999999999999864 778999988543222 13567899999999999999999999998866 799999
Q ss_pred eeCCCCChhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 440 DYASNGTLYEHLHYGE-------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
||+++|+|.+++.... ...+++..+..++.++++||+|||+. +++||||||+||++++++.+||+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 9999999999997541 24689999999999999999999998 9999999999999999999999999999
Q ss_pred hhccc
Q 009972 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+.+..
T Consensus 153 ~~~~~ 157 (262)
T cd00192 153 RDVYD 157 (262)
T ss_pred ccccc
Confidence 87654
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-22 Score=197.38 Aligned_cols=145 Identities=21% Similarity=0.288 Sum_probs=123.3
Q ss_pred hhhCcCCCeeEEEEEeC-----------------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeE
Q 009972 364 NIIGSSPDSLVYKGTMK-----------------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-----------------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 426 (521)
+.||+|+||.||+++.. ++..+|+|.+.... ......+|.+|+.++++++|+||++++++
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~~~ 87 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA---NKNARNDFLKEIKIMSRLKDPNIIRLLAV 87 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 78999999999998643 23468888874321 22345679999999999999999999999
Q ss_pred eecCCCCceEEEEeeCCCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 009972 427 CRESSPFTRMLVFDYASNGTLYEHLHYGE---------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (521)
Q Consensus 427 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NIL 497 (521)
+...+ ..++||||+++|+|.+++.... ...+++.+..+++.|++.||+|||+. +++||||||+||+
T Consensus 88 ~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Nil 162 (296)
T cd05095 88 CITSD--PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNCL 162 (296)
T ss_pred EecCC--ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheEE
Confidence 98877 7899999999999999987432 12478899999999999999999999 9999999999999
Q ss_pred ecCCCCeeeCCCchhhhcc
Q 009972 498 LTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 498 ld~~~~~kl~DfGla~~~~ 516 (521)
+++++.+||+|||+++.+.
T Consensus 163 i~~~~~~~l~dfg~~~~~~ 181 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLY 181 (296)
T ss_pred EcCCCCEEeccCccccccc
Confidence 9999999999999998653
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-22 Score=193.03 Aligned_cols=148 Identities=18% Similarity=0.210 Sum_probs=125.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|... ++..|++|++...... ........+.+|+.++++++||||+++++++........++++||
T Consensus 8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~ 87 (266)
T cd06651 8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEY 87 (266)
T ss_pred ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeC
Confidence 78999999999999886 5889999987543221 112234568899999999999999999999876433368899999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 88 ~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 88 MPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 99999999996433 489999999999999999999998 99999999999999999999999999987653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-22 Score=196.25 Aligned_cols=144 Identities=19% Similarity=0.213 Sum_probs=124.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. ++..||+|++...... ......+.+|+.++..++||||+++++++..+. ..++||||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 81 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE--EGVPSTAIREISLLKELQHPNIVCLQDVLMQES--RLYLIFEFL 81 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEecccccc--CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC--eEEEEEecC
Confidence 67999999999999986 6889999988543211 223356889999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+ |+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+
T Consensus 82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 151 (285)
T cd07861 82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAF 151 (285)
T ss_pred C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeec
Confidence 8 68998886432 24689999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-22 Score=198.14 Aligned_cols=146 Identities=23% Similarity=0.255 Sum_probs=123.9
Q ss_pred hhhhCcCCCeeEEEEEeC--------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCC
Q 009972 363 SNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
.+.||+|+||.||+|+.. ++..||+|.+.... .....+++.+|+.++..+ +||||+++++++....
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-- 94 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG-- 94 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc---chHHHHHHHHHHHHHHhhccCCCchheeEEEecCC--
Confidence 378999999999999752 23468888874221 123346789999999999 8999999999998876
Q ss_pred ceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 009972 434 TRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 434 ~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld 499 (521)
..++||||+++|+|.+++.... ...++|.++..++.|++.||+|||+. +++||||||+||+++
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili~ 171 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLVT 171 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEEc
Confidence 7899999999999999997431 13578999999999999999999999 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009972 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++.+.
T Consensus 172 ~~~~~kl~D~g~~~~~~ 188 (304)
T cd05101 172 ENNVMKIADFGLARDVN 188 (304)
T ss_pred CCCcEEECCCccceecc
Confidence 99999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-22 Score=196.75 Aligned_cols=144 Identities=27% Similarity=0.361 Sum_probs=124.4
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+++.+ ++..||+|.+.... .....++|.+|+.++++++||||+++++++.... ..++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~--~~~l 85 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK--PMCL 85 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCc---CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--ccEE
Confidence 78999999999999874 35789999874321 2234567999999999999999999999998776 7899
Q ss_pred EEeeCCCCChhhhhhcCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 009972 438 VFDYASNGTLYEHLHYGE--------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NIL 497 (521)
||||+++|+|.+++.... ...+++.+++.++.+++.||+|||+. +++||||||+||+
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil 162 (288)
T cd05050 86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCL 162 (288)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhheE
Confidence 999999999999996321 12478999999999999999999998 9999999999999
Q ss_pred ecCCCCeeeCCCchhhhc
Q 009972 498 LTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 498 ld~~~~~kl~DfGla~~~ 515 (521)
+++++.+||+|||+++.+
T Consensus 163 ~~~~~~~~l~dfg~~~~~ 180 (288)
T cd05050 163 VGENMVVKIADFGLSRNI 180 (288)
T ss_pred ecCCCceEECccccceec
Confidence 999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-22 Score=195.01 Aligned_cols=145 Identities=19% Similarity=0.321 Sum_probs=124.5
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|...+ +..||+|.+.... .......+.+|+.++..++||||+++++++.... ..++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~ 86 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ--PTLV 86 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC--CcEE
Confidence 789999999999998753 3679999874321 1233457899999999999999999999998876 7899
Q ss_pred EEeeCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCC
Q 009972 438 VFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~Df 509 (521)
||||+++|+|.+++.... ...++|..+..++.+++.||.|||+. +++||||||+||++++++.+||+||
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~df 163 (277)
T cd05032 87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGDF 163 (277)
T ss_pred EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECCc
Confidence 999999999999996422 22478999999999999999999998 9999999999999999999999999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 164 g~~~~~~ 170 (277)
T cd05032 164 GMTRDIY 170 (277)
T ss_pred ccchhhc
Confidence 9987653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-22 Score=196.65 Aligned_cols=144 Identities=23% Similarity=0.273 Sum_probs=122.2
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+... ...+++|.+.... ......++.+|+.+++.++||||+++++.|...+ ..++
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 80 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA---SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG--PLLL 80 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC---CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC--CcEE
Confidence 689999999999998632 2467887764322 1223457899999999999999999999998776 7899
Q ss_pred EEeeCCCCChhhhhhcC----------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 009972 438 VFDYASNGTLYEHLHYG----------------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~----------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~N 495 (521)
++||+++|+|.+++... ....++|.++..++.|++.||+|||+. +++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 99999999999998631 123588999999999999999999998 99999999999
Q ss_pred eeecCCCCeeeCCCchhhhc
Q 009972 496 VYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 496 ILld~~~~~kl~DfGla~~~ 515 (521)
|++++++.+||+|||+++.+
T Consensus 158 ill~~~~~~kl~dfg~~~~~ 177 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDV 177 (290)
T ss_pred EEEcCCCcEEeccccccccc
Confidence 99999999999999999764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.5e-22 Score=191.29 Aligned_cols=144 Identities=24% Similarity=0.336 Sum_probs=127.0
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
++||+|+||.||++...+++.||+|.+..... ......+.+|+.++++++|+||+++++++.... ..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~~ 75 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP---PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ--PIYIVMELVP 75 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--CeEEEEEcCC
Confidence 36899999999999998789999998743322 134567999999999999999999999998877 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++|.+++.... ..+++..+..++.+++.|++|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 76 ~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 76 GGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEE 144 (251)
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeecccccccc
Confidence 999999996433 3589999999999999999999999 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-23 Score=194.97 Aligned_cols=142 Identities=15% Similarity=0.204 Sum_probs=127.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.++|+|+||.|||+.++ .|+.+|+|++.... ..+++..|+.+++.++.|++|+++|-|.... ..++|||||
T Consensus 39 ~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s------DLQEIIKEISIMQQC~S~yVVKYYGSYFK~s--DLWIVMEYC 110 (502)
T KOG0574|consen 39 GKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT------DLQEIIKEISIMQQCKSKYVVKYYGSYFKHS--DLWIVMEYC 110 (502)
T ss_pred HHhcCCcchHHHHHHHhccCcEEEEEecCccc------hHHHHHHHHHHHHHcCCchhhhhhhhhccCC--ceEeehhhc
Confidence 78999999999999987 79999999986543 2467899999999999999999999776655 699999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
..|+..+.++.+. .+|.+.++..|.++..+||+|||.. .-+|||||+.||||..+|.+|++|||.|-.+.+
T Consensus 111 GAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD 181 (502)
T KOG0574|consen 111 GAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD 181 (502)
T ss_pred CCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhh
Confidence 9999999997443 4799999999999999999999998 899999999999999999999999999987764
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-22 Score=197.55 Aligned_cols=142 Identities=21% Similarity=0.257 Sum_probs=123.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.+ +++.||+|.+...... .....+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~--~~~lv~e~~ 86 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFEYL 86 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc---CchhHHHHHHHHHHhcCCCCcceEEEEEecCC--eEEEEEecc
Confidence 67999999999999986 6789999988543221 22345788999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+ ++|.+++.... ..+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 87 ~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 154 (301)
T cd07873 87 D-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK 154 (301)
T ss_pred c-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence 8 59999886432 3588999999999999999999998 9999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-22 Score=197.38 Aligned_cols=146 Identities=21% Similarity=0.248 Sum_probs=126.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|++|.||+|... +++.||+|.+...... ........+..|++++++++|+||+++++++.+.+ ..++||||
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS--NINLVFEF 83 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC--EEEEEEcc
Confidence 67999999999999986 6889999998544321 11223456788999999999999999999998866 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ +|+|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 84 ~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 84 M-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred c-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9 889999997543 3689999999999999999999999 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-22 Score=190.21 Aligned_cols=151 Identities=20% Similarity=0.258 Sum_probs=132.0
Q ss_pred CHHHHHHHHhhhhhhhCcCCCeeEEEEEe-CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEee
Q 009972 351 SRQELEVACEDFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCR 428 (521)
Q Consensus 351 ~~~~l~~~~~~f~~~lg~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~ 428 (521)
+++|+.+.| +++||+|+|+.|--++. .+|.++|||++.+ ..+..+.++.+|++++... .|+||++|+.|++
T Consensus 74 ~F~d~YkLt---~e~LGeGAyasVqtcv~i~t~~EYAVKiidK----q~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 74 KFEDMYKLT---SELLGEGAYASVQTCVSIQTGKEYAVKIIDK----QPGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred hHHHHHHhH---HHHhcCccceeeeeeeeeccchhhhhhhhhc----CCchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 357888887 48999999999999976 5899999999843 2456788899999999999 6999999999999
Q ss_pred cCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---Cee
Q 009972 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPK 505 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~---~~k 505 (521)
++. ..|||||-|.+|.|..+|+++. .+++.+..++..+||.||.|||.+ +|.||||||+|||..+.. -+|
T Consensus 147 dd~--~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 147 DDT--RFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred ccc--eEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCcee
Confidence 988 7999999999999999997554 489999999999999999999999 999999999999996543 589
Q ss_pred eCCCchhhhc
Q 009972 506 VSPLCLSFLL 515 (521)
Q Consensus 506 l~DfGla~~~ 515 (521)
|+||.|+.-+
T Consensus 220 iCDfDLgSg~ 229 (463)
T KOG0607|consen 220 ICDFDLGSGI 229 (463)
T ss_pred eecccccccc
Confidence 9999887543
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.7e-22 Score=191.25 Aligned_cols=145 Identities=13% Similarity=0.187 Sum_probs=127.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.+|+|.+..... ....+.+.+|+.++++++|+||+++++.+.+.+ ..++||||+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 80 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS---SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG--HLYIVMEYC 80 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc---hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC--EEEEEEeeC
Confidence 68999999999999986 688999998753321 223457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++.....++.+++.||.|||+. +|+|+||||+||++++++.++++|||+++.+.
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 151 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLT 151 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeec
Confidence 999999998754445689999999999999999999999 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.4e-22 Score=194.53 Aligned_cols=145 Identities=21% Similarity=0.288 Sum_probs=123.1
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|++|.||+|...+ +..||+|.+.... .......|.+|+.++++++|+||+++++++.+.+ ..++
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~l 86 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC---SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL--PRFI 86 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CcEE
Confidence 789999999999998864 4568888763221 2233457999999999999999999999998776 6899
Q ss_pred EEeeCCCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeeeCCC
Q 009972 438 VFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKVSPL 509 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~---~~kl~Df 509 (521)
||||+++|+|.++++... ...++|.++.+++.+|+.||+|||+. +++||||||+||++++++ .+||+||
T Consensus 87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEeccC
Confidence 999999999999997432 13589999999999999999999999 999999999999998754 6999999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 164 g~~~~~~ 170 (277)
T cd05036 164 GMARDIY 170 (277)
T ss_pred ccccccC
Confidence 9998653
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-22 Score=194.12 Aligned_cols=143 Identities=22% Similarity=0.308 Sum_probs=123.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|..+ +|. .+|+|...... ......++.+|+.++++++||||++++++|.. . ..++|
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~~v 86 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET---SPKANKEILDEAYVMASVDHPHVVRLLGICLS-S--QVQLI 86 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C--ceEEE
Confidence 78999999999999875 333 57888764322 12344678999999999999999999999987 3 68999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.++++... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 87 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 87 TQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 99999999999997443 3489999999999999999999998 99999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-22 Score=198.35 Aligned_cols=146 Identities=25% Similarity=0.285 Sum_probs=124.1
Q ss_pred hhhhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCC
Q 009972 363 SNIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
.+.||+|+||.||+++..+ ...+|+|.+.... ......++.+|+.++.++ +||||++++++|...+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~-- 97 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG-- 97 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC---ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--
Confidence 3789999999999998632 3469999874321 122345688999999999 8999999999998877
Q ss_pred ceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 009972 434 TRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 434 ~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld 499 (521)
..++||||+++|+|.++++... ...++|.++.+++.|++.||+|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 7899999999999999997432 13589999999999999999999998 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009972 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++.+.
T Consensus 175 ~~~~~kL~dfg~a~~~~ 191 (307)
T cd05098 175 EDNVMKIADFGLARDIH 191 (307)
T ss_pred CCCcEEECCCccccccc
Confidence 99999999999997653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-22 Score=194.92 Aligned_cols=145 Identities=20% Similarity=0.123 Sum_probs=125.8
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCC
Q 009972 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||+||++..+ +|+.+|+|.+..+... .....+.+.+|+++++.++||||+++.+++...+ ..++||||+++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLK-KRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD--DLCLVMTLMNG 77 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhh-hhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC--eEEEEEecCCC
Confidence 689999999999876 6889999988543211 1223456788999999999999999999998776 78999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 445 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|.+++.......+++.++..++.+++.||.|||+. +++||||+|+||++++++.+||+|||+++.+.
T Consensus 78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~ 146 (277)
T cd05577 78 GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELK 146 (277)
T ss_pred CcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhc
Confidence 9999999755545689999999999999999999998 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-22 Score=211.35 Aligned_cols=148 Identities=17% Similarity=0.164 Sum_probs=125.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC------CceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP------FTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------~~~~ 436 (521)
+.||+|+||+||+|+.. +|+.||+|.+..... .......+.+|+.++..++|+|++++...+..... ...+
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~ 115 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM--SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIA 115 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEE
Confidence 78999999999999875 789999999854432 23345678899999999999999999887653321 1367
Q ss_pred EEEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 437 LVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+||||+++|+|.++++.. ....+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 116 lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFGls~~ 192 (496)
T PTZ00283 116 LVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFGFSKM 192 (496)
T ss_pred EEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecccCee
Confidence 999999999999999643 234689999999999999999999999 999999999999999999999999999987
Q ss_pred cc
Q 009972 515 LV 516 (521)
Q Consensus 515 ~~ 516 (521)
+.
T Consensus 193 ~~ 194 (496)
T PTZ00283 193 YA 194 (496)
T ss_pred cc
Confidence 54
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.3e-22 Score=194.82 Aligned_cols=147 Identities=19% Similarity=0.248 Sum_probs=125.8
Q ss_pred hhhhCcCCCeeEEEEEeCC-----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 363 SNIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
.++||+|+||.||+|...+ +..|++|++... ......+.+.+|+.++++++||||+++++++...+ ...++
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~~~ 86 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH---ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG-EPPFV 86 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCC---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-CCCEE
Confidence 3789999999999999865 678888887422 22334567899999999999999999999987643 26899
Q ss_pred EEeeCCCCChhhhhhcCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCch
Q 009972 438 VFDYASNGTLYEHLHYGER------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGl 511 (521)
++||+++|+|.+++..... ..+++.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||+
T Consensus 87 ~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 87 LYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred EEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCCCC
Confidence 9999999999999864321 4589999999999999999999998 999999999999999999999999999
Q ss_pred hhhcc
Q 009972 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
++.+.
T Consensus 164 ~~~~~ 168 (280)
T cd05043 164 SRDLF 168 (280)
T ss_pred ccccc
Confidence 98653
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.3e-22 Score=194.21 Aligned_cols=144 Identities=24% Similarity=0.369 Sum_probs=123.6
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
..||+|+||.||+|+.+. .+.+++|.+.... .....+.+.+|++++++++|+||+++++++.+.+ ..++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 85 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK---DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE--PHYM 85 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc---chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC--cceE
Confidence 679999999999999752 3568888764322 1223467999999999999999999999998766 7899
Q ss_pred EEeeCCCCChhhhhhcCCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCc
Q 009972 438 VFDYASNGTLYEHLHYGER-------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfG 510 (521)
||||+++|+|.++++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++|||
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~ 162 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLS 162 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcccc
Confidence 9999999999999974331 2589999999999999999999998 99999999999999999999999999
Q ss_pred hhhhc
Q 009972 511 LSFLL 515 (521)
Q Consensus 511 la~~~ 515 (521)
+++..
T Consensus 163 ~~~~~ 167 (275)
T cd05046 163 LSKDV 167 (275)
T ss_pred ccccc
Confidence 98754
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-22 Score=191.48 Aligned_cols=146 Identities=19% Similarity=0.249 Sum_probs=128.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecc-ccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|++|+||+|... ++..|++|.+..... .......+.+.+|+.++++++|+||+++++++.+.. ..++++||
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED--NLYIFLEL 83 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC--eEEEEEEe
Confidence 67999999999999987 789999998865432 122334567899999999999999999999998776 78999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++++|.+++.... .+++..+..++.+++.|++|||+. +++|+||+|+||++++++.+||+|||+++...
T Consensus 84 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 84 VPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 99999999996443 489999999999999999999998 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-22 Score=192.69 Aligned_cols=140 Identities=25% Similarity=0.369 Sum_probs=122.9
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||++.. +++.+|+|.+... ...+.+.+|+.++.+++|||++++++++..+ ..++||||++
T Consensus 12 ~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~~~~v~e~~~ 81 (254)
T cd05083 12 EIIGEGEFGAVLQGEY-TGQKVAVKNIKCD------VTAQAFLEETAVMTKLHHKNLVRLLGVILHN---GLYIVMELMS 81 (254)
T ss_pred eeeccCCCCceEeccc-CCCceEEEeecCc------chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC---CcEEEEECCC
Confidence 7899999999999975 5678999987432 1235789999999999999999999998764 4689999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++.......+++.++..++.+++.|++|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~ 151 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGS 151 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecc
Confidence 99999999755545689999999999999999999998 99999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-22 Score=197.19 Aligned_cols=144 Identities=22% Similarity=0.352 Sum_probs=121.7
Q ss_pred hhhhCcCCCeeEEEEEeCC-CC--EEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEE
Q 009972 363 SNIIGSSPDSLVYKGTMKG-GP--EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~-~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.++||+|+||.||+|..++ +. .+++|.+.... .....+.|.+|+.++.++ +||||+++++++.... ..+++
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~lv 81 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA---SENDHRDFAGELEVLCKLGHHPNIINLLGACENRG--YLYIA 81 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccC---CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC--cceEE
Confidence 3789999999999998864 33 46777763211 122345789999999999 7999999999998776 78999
Q ss_pred EeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCe
Q 009972 439 FDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~ 504 (521)
+||+++|+|.++++... ...+++..+..|+.|++.||+|||+. +++||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 99999999999996422 12488999999999999999999998 99999999999999999999
Q ss_pred eeCCCchhhh
Q 009972 505 KVSPLCLSFL 514 (521)
Q Consensus 505 kl~DfGla~~ 514 (521)
||+|||+++.
T Consensus 159 kl~dfg~~~~ 168 (297)
T cd05089 159 KIADFGLSRG 168 (297)
T ss_pred EECCcCCCcc
Confidence 9999999864
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.9e-22 Score=193.59 Aligned_cols=142 Identities=18% Similarity=0.146 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. ++..+|+|.+.... ....+.|.+|++++++++||||+++++++.... ..++||||+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIES----EEELEDFMVEIDILSECKHPNIVGLYEAYFYEN--KLWILIEFC 84 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC----HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC--eEEEEeecc
Confidence 67999999999999986 67899999875432 223457899999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... ..+++.....++.|++.||.|||+. +|+|+||||+||++++++.++|+|||++...
T Consensus 85 ~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~ 153 (280)
T cd06611 85 DGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKN 153 (280)
T ss_pred CCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhh
Confidence 9999999986432 3589999999999999999999999 9999999999999999999999999987654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-22 Score=198.58 Aligned_cols=144 Identities=22% Similarity=0.282 Sum_probs=119.1
Q ss_pred hhhCcCCCeeEEEEEeCC---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
..||+|+||+||+|+.++ +..||+|.+.... ....+.+|++++++++||||+++++++........++|+|
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 579999999999999753 4689999874321 1235789999999999999999999986544347899999
Q ss_pred eCCCCChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeeeCCC
Q 009972 441 YASNGTLYEHLHYG-------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKVSPL 509 (521)
Q Consensus 441 y~~~g~L~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl----d~~~~~kl~Df 509 (521)
|+++ +|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||+ ++++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9985 888877421 123588999999999999999999999 99999999999999 56789999999
Q ss_pred chhhhccc
Q 009972 510 CLSFLLVS 517 (521)
Q Consensus 510 Gla~~~~~ 517 (521)
|+++.+..
T Consensus 157 G~a~~~~~ 164 (317)
T cd07867 157 GFARLFNS 164 (317)
T ss_pred cceeccCC
Confidence 99987643
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-22 Score=195.18 Aligned_cols=142 Identities=21% Similarity=0.175 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..+++|.+..+. ....+.+.+|+.+++.++||||+++++++..++ ..++||||+
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 91 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYMVEIEILATCNHPYIVKLLGAFYWDG--KLWIMIEFC 91 (292)
T ss_pred heecCCCCeEEEEEEECCCCceEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC--eEEEEEecC
Confidence 67999999999999987 57889999875432 234567889999999999999999999998776 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++++|..++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceec
Confidence 9999998876332 3589999999999999999999998 9999999999999999999999999988753
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-22 Score=196.30 Aligned_cols=145 Identities=19% Similarity=0.173 Sum_probs=127.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.+|+|.+.... .........+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 83 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAK-IVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS--NLYLVMEYV 83 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHH-hhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--eEEEEEecC
Confidence 68999999999999986 68899999874322 112233467899999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||+++.+.
T Consensus 84 ~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 84 PGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred CCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 999999999654 3589999999999999999999998 99999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.9e-22 Score=194.12 Aligned_cols=146 Identities=23% Similarity=0.330 Sum_probs=127.0
Q ss_pred hhhCcCCCeeEEEEEeC-----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||++++. ++..+|+|.+...... ...+.|.+|+++++.++||||+++++++........++|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 86 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE---QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLI 86 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch---HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEE
Confidence 68999999999999864 3678999988543221 345679999999999999999999999977444478999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..++|.++..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 87 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 87 MEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 99999999999997443 2589999999999999999999998 99999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=8e-22 Score=191.85 Aligned_cols=148 Identities=16% Similarity=0.198 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecc-ccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|... ++..||+|.+..... .........+.+|++++++++|+||+++++++.+......++++||
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~ 87 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEY 87 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEe
Confidence 78999999999999986 688999998743321 1122344678999999999999999999999876543368899999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++++|.+++.... .+++....+++.+++.||.|||+. +++|+||||+||++++++.++|+|||+++.+.
T Consensus 88 ~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 88 MPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 99999999986433 478999999999999999999998 99999999999999999999999999998653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-22 Score=194.70 Aligned_cols=143 Identities=24% Similarity=0.287 Sum_probs=123.8
Q ss_pred hhhhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|+||+||+++... ++.+|+|.+...... ........+|+.++.+++||||+++++++.... ..++||||
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~~v~~~ 79 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE--EEEREENIREIKILRRLRHPNIVQILDVFQDDN--YLYIVMEY 79 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH--HHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS--EEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc--ccccchhhhhhhccccccccccccccccccccc--cccccccc
Confidence 3679999999999999984 568999998544321 222334466999999999999999999998876 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++++|.+++. ....+++..+..++.++++||+|||+. +++|+||||+||++++++.++|+|||.+..
T Consensus 80 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 80 CPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVK 147 (260)
T ss_dssp ETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEE
T ss_pred ccccccccccc--ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 99999999997 223589999999999999999999999 999999999999999999999999999874
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.3e-22 Score=193.58 Aligned_cols=142 Identities=20% Similarity=0.254 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... ++..||+|.+..... ....+.+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT--KLWIIMEYL 84 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc---hHHHHHHHHHHHHHHcCCCCccHhhhcccccCC--ceEEEEEcc
Confidence 67999999999999886 578899998743321 223457899999999999999999999998776 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. ..+++..+..++.++++|++|||+. +++|+||+|+||++++++.+||+|||+++.+.
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccccccccc
Confidence 99999999853 3489999999999999999999998 99999999999999999999999999997654
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.1e-22 Score=191.70 Aligned_cols=142 Identities=18% Similarity=0.221 Sum_probs=124.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|+.+++.++||||+++++++...+ ..++|+||+
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~--~~~lv~e~~ 88 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG----EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD--KLWICMEFC 88 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC--EEEEEEecc
Confidence 78999999999999886 688899998754321 22345788999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++.+...++.+++.|+.|||+. +++|+||||+||+++.++.+||+|||+++.+.
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 89 GGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQIT 157 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence 9999999986443 589999999999999999999999 99999999999999999999999999987543
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.5e-22 Score=195.30 Aligned_cols=145 Identities=22% Similarity=0.332 Sum_probs=124.5
Q ss_pred hhhCcCCCeeEEEEEeCC-----------------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeE
Q 009972 364 NIIGSSPDSLVYKGTMKG-----------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-----------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 426 (521)
+.||+|+||.||+++..+ +..||+|.+.... .....+++.+|++++++++||||++++++
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 87 (296)
T cd05051 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA---SDNAREDFLKEVKILSRLSDPNIARLLGV 87 (296)
T ss_pred ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 789999999999998753 2357888874332 12345679999999999999999999999
Q ss_pred eecCCCCceEEEEeeCCCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 009972 427 CRESSPFTRMLVFDYASNGTLYEHLHYGE---------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (521)
Q Consensus 427 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NIL 497 (521)
+..+. ..++++||+++++|.+++.... ...+++..+..++.+++.||+|||+. +++||||||+||+
T Consensus 88 ~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Nil 162 (296)
T cd05051 88 CTVDP--PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNCL 162 (296)
T ss_pred EecCC--CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhcee
Confidence 98876 7899999999999999997432 12589999999999999999999998 9999999999999
Q ss_pred ecCCCCeeeCCCchhhhcc
Q 009972 498 LTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 498 ld~~~~~kl~DfGla~~~~ 516 (521)
+++++.++|+|||+++.+.
T Consensus 163 i~~~~~~~l~dfg~~~~~~ 181 (296)
T cd05051 163 VGKNYTIKIADFGMSRNLY 181 (296)
T ss_pred ecCCCceEEccccceeecc
Confidence 9999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.3e-22 Score=197.79 Aligned_cols=146 Identities=23% Similarity=0.273 Sum_probs=123.7
Q ss_pred hhhhCcCCCeeEEEEEeC--------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCC
Q 009972 363 SNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
.+.||+|+||.||+++.. ....+|+|.+.... .......+.+|+.++.++ +||||++++++|....
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 91 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA---TDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG-- 91 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC---ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC--
Confidence 378999999999999752 24568888874321 123345688999999999 6999999999998766
Q ss_pred ceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 009972 434 TRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 434 ~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld 499 (521)
..+++|||+++|+|.+++.... ...++|.++.+++.|++.||.|||+. +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 7899999999999999996421 13589999999999999999999998 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009972 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++.+.
T Consensus 169 ~~~~~kL~Dfg~~~~~~ 185 (314)
T cd05099 169 EDNVMKIADFGLARGVH 185 (314)
T ss_pred CCCcEEEcccccccccc
Confidence 99999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-22 Score=195.90 Aligned_cols=141 Identities=16% Similarity=0.212 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ...+.+.+|+.+++.++|+||+++++++...+ ..++||||+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~~ 98 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYL 98 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--EEEEeeccc
Confidence 68999999999999975 789999998854322 22356889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++... .+++.++..++.+++.||.|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 999999998632 478999999999999999999998 99999999999999999999999999987653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.4e-22 Score=199.82 Aligned_cols=145 Identities=21% Similarity=0.169 Sum_probs=121.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----CCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
+.||+|+||.||+|... ++..||+|++..... .....+.+.+|+.++++++||||+++++++.... ....+++
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 98 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ--SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLV 98 (343)
T ss_pred eecccCCCeEEEEEEECCCCCEEEEEEeCchhh--hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEE
Confidence 78999999999999885 678999998843221 1223456789999999999999999999875432 1247899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|++ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 99 ~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 99 TNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred eecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence 9998 6699888753 2489999999999999999999999 999999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5e-22 Score=195.35 Aligned_cols=145 Identities=19% Similarity=0.265 Sum_probs=126.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. +++.||+|++...... ......+.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 81 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEFL 81 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccc--cccchHHHHHHHHHHhcCCCCCcchhhhcccCC--cEEEEeecc
Confidence 67999999999999986 6889999987543221 223356889999999999999999999998776 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ ++|.+++.......+++..+..++.+++.||+|||+. +++||||+|+||++++++.+||+|||+++.+.
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~ 151 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 151 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence 6 5899998755555689999999999999999999998 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.3e-22 Score=195.24 Aligned_cols=141 Identities=16% Similarity=0.219 Sum_probs=124.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.|++|.+...... ....+.+|+.+++.++||||+++++++.... ..++||||+
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~----~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~--~~~lv~e~~ 99 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYL 99 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc----hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEEeeccc
Confidence 67999999999999975 6889999988543221 2356889999999999999999999998766 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence 999999998632 479999999999999999999999 99999999999999999999999999987643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.5e-22 Score=207.04 Aligned_cols=141 Identities=17% Similarity=0.223 Sum_probs=116.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC------CCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES------SPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~~~~ 436 (521)
++||+|+||.||+|+.. +++.||+|++.... ....+|+.+++.++|||||++.+++... .....+
T Consensus 72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~ 143 (440)
T PTZ00036 72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN 143 (440)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence 78999999999999986 68899999874321 1245799999999999999999987432 111367
Q ss_pred EEEeeCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeeeCCCchhh
Q 009972 437 LVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSF 513 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-~~kl~DfGla~ 513 (521)
+||||+++ ++.+++.. .....+++.....++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+|+
T Consensus 144 lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 144 VVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 89999985 78777652 2334689999999999999999999999 999999999999999664 79999999998
Q ss_pred hcc
Q 009972 514 LLV 516 (521)
Q Consensus 514 ~~~ 516 (521)
.+.
T Consensus 220 ~~~ 222 (440)
T PTZ00036 220 NLL 222 (440)
T ss_pred hcc
Confidence 654
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.4e-22 Score=199.09 Aligned_cols=146 Identities=24% Similarity=0.274 Sum_probs=123.7
Q ss_pred hhhhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCC
Q 009972 363 SNIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
.+.||+|+||.||+++..+ +..||+|.+.... .....+++.+|+.++.++ +||||++++++|...+
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 91 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG-- 91 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC--
Confidence 4789999999999997531 2368888764321 123346789999999999 8999999999998776
Q ss_pred ceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 009972 434 TRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 434 ~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld 499 (521)
..++++||+++|+|.+++.... ...++|.++..++.|++.||+|||+. +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 7899999999999999986421 23589999999999999999999998 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009972 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++.+.
T Consensus 169 ~~~~~kL~Dfg~~~~~~ 185 (334)
T cd05100 169 EDNVMKIADFGLARDVH 185 (334)
T ss_pred CCCcEEECCcccceecc
Confidence 99999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-22 Score=196.58 Aligned_cols=156 Identities=18% Similarity=0.180 Sum_probs=128.0
Q ss_pred HHHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEee
Q 009972 353 QELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCR 428 (521)
Q Consensus 353 ~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~ 428 (521)
+++.++.++|. +.||+|+||.||+++.. +++.+|+|.+.... ....++.+|+.++.++ +||||+++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 44445556665 78999999999999986 57889999864321 1234688899999999 6999999999885
Q ss_pred cC---CCCceEEEEeeCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 009972 429 ES---SPFTRMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 429 ~~---~~~~~~lv~ey~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~ 503 (521)
.. .....++||||+++|+|.++++. .....+++..+..++.++++||.|||+. +++||||||+||++++++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCC
Confidence 31 12268999999999999998753 2234589999999999999999999998 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009972 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+++.+.
T Consensus 163 ~kl~dfg~~~~~~ 175 (286)
T cd06638 163 VKLVDFGVSAQLT 175 (286)
T ss_pred EEEccCCceeecc
Confidence 9999999987654
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.7e-22 Score=193.42 Aligned_cols=143 Identities=22% Similarity=0.306 Sum_probs=123.3
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
..||+|+||.||++... ++..+|+|.+... .......|.+|+++++.++|+||+++++++.... ..++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 84 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR--PLLM 84 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC----CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC--ceEE
Confidence 78999999999999742 3557888876432 2234567999999999999999999999998776 7899
Q ss_pred EEeeCCCCChhhhhhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCe
Q 009972 438 VFDYASNGTLYEHLHYGER-------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~ 504 (521)
+|||+++|+|.++++.... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999974321 3489999999999999999999998 99999999999999999999
Q ss_pred eeCCCchhhhc
Q 009972 505 KVSPLCLSFLL 515 (521)
Q Consensus 505 kl~DfGla~~~ 515 (521)
||+|||+++.+
T Consensus 162 kL~dfg~~~~~ 172 (280)
T cd05092 162 KIGDFGMSRDI 172 (280)
T ss_pred EECCCCceeEc
Confidence 99999998754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=190.08 Aligned_cols=146 Identities=19% Similarity=0.248 Sum_probs=128.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.+|+|.+..... .....+++.+|+.++++++||||+++++++...+ ..++|+||+
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESFEENG--NLYIVMDYC 81 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC--eEEEEEecC
Confidence 68999999999999886 688999999854322 2234457899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......+++.++.+++.|++.||+|||+. +++|+||+|+||++++++.++|+|||+++.+.
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~ 152 (256)
T cd08218 82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLN 152 (256)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecC
Confidence 999999999754444689999999999999999999998 99999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-22 Score=194.20 Aligned_cols=143 Identities=17% Similarity=0.269 Sum_probs=119.6
Q ss_pred hhhCcCCCeeEEEEEeCC-C-------CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCce
Q 009972 364 NIIGSSPDSLVYKGTMKG-G-------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~-------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 435 (521)
+.||+|+||.||+|.... + ..+++|.+... .....+.+.+|+.+++.++|||++++++++.... ..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~--~~ 74 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD--ES 74 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC--Cc
Confidence 469999999999998752 2 24777766322 1233457889999999999999999999998766 78
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--------eeeC
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--------PKVS 507 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~--------~kl~ 507 (521)
++||||+++|+|.++++... ..++|..+.+++.|++.||+|||+. +|+||||||+||+++.++. ++++
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred EEEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEec
Confidence 99999999999999997443 3589999999999999999999999 9999999999999987765 5999
Q ss_pred CCchhhhcc
Q 009972 508 PLCLSFLLV 516 (521)
Q Consensus 508 DfGla~~~~ 516 (521)
|||++....
T Consensus 151 d~g~~~~~~ 159 (258)
T cd05078 151 DPGISITVL 159 (258)
T ss_pred ccccccccC
Confidence 999887543
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.3e-22 Score=191.54 Aligned_cols=147 Identities=22% Similarity=0.272 Sum_probs=126.9
Q ss_pred hhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccc-----hhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT-----GYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
...||+|++|.||+|... +++.+|+|.+........ ....+.+.+|+.++.+++||||+++++++.... ..+
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 82 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD--HLN 82 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC--ccE
Confidence 367999999999999885 678999998854432211 122356889999999999999999999998876 789
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+||+++++|.+++... ..+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 83 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 83 IFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred EEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 999999999999999643 3589999999999999999999998 99999999999999999999999999988765
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.8e-22 Score=192.98 Aligned_cols=144 Identities=19% Similarity=0.236 Sum_probs=123.2
Q ss_pred hhhhCcCCCeeEEEEEeCCC----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 363 SNIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|...+. ..|++|...... .....+.+.+|+.++++++||||+++++++.+. ..++|
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---~~~lv 84 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT---SPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN---PVWIV 84 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC---CcEEE
Confidence 37899999999999987532 468888764322 123456799999999999999999999998764 47899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 85 MELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecc
Confidence 99999999999997433 3589999999999999999999998 99999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-24 Score=190.89 Aligned_cols=145 Identities=21% Similarity=0.229 Sum_probs=125.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|.|+.||++... +|+.+|+|++..+... ....+++.+|+++-+.++|||||+|..-+.+.. ..|+|+|+|
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~--~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~--~~ylvFe~m 92 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDLV 92 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhc--cccHHHHHHHHHHHHhcCCCcEeehhhhhcccc--eeEEEEecc
Confidence 78999999999999875 7899999988655422 224567899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~~~~kl~DfGla~~~~~ 517 (521)
++|+|..-|-.+ ..+++...-.+++||.++|.|+|.+ +|||||+||+|+||.. .-.+|++|||+|..+.+
T Consensus 93 ~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 93 TGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred cchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 999998877533 3478889999999999999999999 9999999999999953 34689999999998764
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=196.10 Aligned_cols=147 Identities=21% Similarity=0.155 Sum_probs=129.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|... +++.+|+|.+...... .....+.+.+|++++.+++||||+++++.+.... ..++||||+
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 83 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI-KRNKVKRVLTEQEILATLDHPFLPTLYASFQTET--YLCLVMDYC 83 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccc-hHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC--EEEEEEEec
Confidence 67999999999999987 4889999998644322 1224457899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......+++..+..++.|+++||+|||+. +++||||||+||++++++.++|+|||++....
T Consensus 84 ~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 84 PGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred CCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 999999999754445689999999999999999999998 99999999999999999999999999988653
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=192.89 Aligned_cols=143 Identities=15% Similarity=0.154 Sum_probs=125.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||++... +++.+|+|.+.... .....+.+.+|++++..++||||+++++++...+ ..++||||+
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 85 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN--NICMCMEFM 85 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC--EEEEEEecC
Confidence 78999999999999986 68889999875332 1234567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.++++..+ .+++..+..++.+++.||.|||+.. +++||||||+||++++++.++|+|||+++.+
T Consensus 86 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~ 154 (284)
T cd06620 86 DCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGEL 154 (284)
T ss_pred CCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence 9999999986433 5899999999999999999999731 7999999999999999999999999998754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=189.48 Aligned_cols=147 Identities=18% Similarity=0.235 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+++.+ +++.+|+|++..+.. .....+.+.+|++++++++|+|++++++.+...+ ...+++|||+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~lv~e~~ 82 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA--SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGED-GLLYIVMGFC 82 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCC-CEEEEEeccc
Confidence 68999999999999986 578899999854322 2234456889999999999999999999876433 1578999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......+++.++..++.+++.|++|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 83 ~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~ 153 (257)
T cd08223 83 EGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLE 153 (257)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEec
Confidence 999999999754445689999999999999999999999 99999999999999999999999999998664
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.1e-22 Score=195.98 Aligned_cols=143 Identities=24% Similarity=0.334 Sum_probs=120.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|... ++. .+|+|.+.... ......++.+|+.+++.++||||++++|+|... ..+++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---~~~~v 86 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT---GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---TIQLV 86 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC---Cceee
Confidence 68999999999999875 444 36777763221 122344689999999999999999999999764 36799
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 87 ~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 87 TQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred ehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccccc
Confidence 99999999999987433 3589999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.7e-22 Score=195.78 Aligned_cols=159 Identities=21% Similarity=0.202 Sum_probs=132.0
Q ss_pred cCHHHHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeee
Q 009972 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLG 425 (521)
Q Consensus 350 ~~~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g 425 (521)
++.+++.+++++|. +.||+|+||.||++... +++.+|+|.+.... .....+.+|+.++.++ +|||++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~ 86 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYG 86 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 34455666677776 78999999999999986 68899999874321 1234678899999999 8999999999
Q ss_pred EeecCC---CCceEEEEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 009972 426 YCRESS---PFTRMLVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 426 ~~~~~~---~~~~~lv~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~ 500 (521)
++...+ ....++||||+++|+|.++++.. ....++|..+..++.+++.||+|||+. +++||||||+||++++
T Consensus 87 ~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~ 163 (291)
T cd06639 87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTT 163 (291)
T ss_pred EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcC
Confidence 987533 12589999999999999988631 234589999999999999999999998 9999999999999999
Q ss_pred CCCeeeCCCchhhhcc
Q 009972 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+++.+.
T Consensus 164 ~~~~kl~dfg~~~~~~ 179 (291)
T cd06639 164 EGGVKLVDFGVSAQLT 179 (291)
T ss_pred CCCEEEeecccchhcc
Confidence 9999999999988654
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.9e-22 Score=193.49 Aligned_cols=146 Identities=16% Similarity=0.157 Sum_probs=126.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.+ ++..||+|.+.... .......+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG--AVYMCMEYM 81 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC--eEEEEEeec
Confidence 78999999999999997 78899999875321 1223457899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.++++... ...+++..+..++.+++.||.|||+.+ +++||||||+||++++++.+||+|||+++.+.
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9999999987432 235899999999999999999999632 89999999999999999999999999987653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.1e-22 Score=194.61 Aligned_cols=142 Identities=22% Similarity=0.273 Sum_probs=123.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.+ +++.||+|.+...... .....+.+|++++++++|+||+++++++.+.+ ..++||||+
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 85 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE---GAPFTAIREASLLKDLKHANIVTLHDIIHTKK--TLTLVFEYL 85 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc---CCchhHHHHHHHHhhCCCcceeeEEEEEecCC--eEEEEEecC
Confidence 68999999999999987 6889999998543221 12235778999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++ +|.+++.... ..+++.....++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 ~~-~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 86 DT-DLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAK 153 (291)
T ss_pred CC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccccccc
Confidence 85 9999886433 3689999999999999999999999 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.2e-22 Score=194.22 Aligned_cols=147 Identities=24% Similarity=0.282 Sum_probs=120.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCccceeeeEeecCC---CCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRESS---PFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~---~~~~~ 436 (521)
+.||+|+||+||+|+.+ +++.||+|.+...... ......+.+|+.++..+ +||||+++++++.... ....+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~ 83 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE--DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVT 83 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC--CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEE
Confidence 67999999999999987 6889999988543221 11223456777776655 7999999999986432 22579
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++ +|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 84 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 84 LVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred EEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 99999985 899998755445689999999999999999999999 99999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.8e-22 Score=195.56 Aligned_cols=143 Identities=14% Similarity=0.062 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.|++|.+..... ......+.+.+|+.++..++||||+++++.+...+ ..++||||+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 83 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNL-ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR--HLCMVMEYV 83 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhh-hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC--EEEEEEecC
Confidence 78999999999999987 578899998754321 11223457889999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
++|+|.+++... ..+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 84 ~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~ 150 (305)
T cd05609 84 EGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKI 150 (305)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccc
Confidence 999999999643 3589999999999999999999998 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-22 Score=196.14 Aligned_cols=144 Identities=19% Similarity=0.319 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|..+ +++.||+|++...... ....+.+.+|+++++.++||||+++++++.... ..++|+||+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 82 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD--KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK--RLYLVFEFV 82 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc--chhhHHHHHHHHHHHhcCCcchhhHHHhcccCC--eEEEEEecC
Confidence 78999999999999997 5889999987443221 123456889999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++.|.++.+... .++|.++..++.++++||+|||+. +++||||+|+||++++++.+||+|||+++.+.
T Consensus 83 ~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~ 151 (286)
T cd07846 83 DHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 151 (286)
T ss_pred CccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeecc
Confidence 9999988775432 489999999999999999999998 99999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=189.09 Aligned_cols=142 Identities=22% Similarity=0.321 Sum_probs=125.2
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||++...++..+|+|.+..... ...+|.+|++++++++|||++++++++.... ..++||||+
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 81 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERS--PICLVFEFM 81 (256)
T ss_pred EeeecCcccceEEEEEEeCCCeEEEEECCCCCC-----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCC--ceEEEEEcC
Confidence 378999999999999988788899998743221 2346899999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.++++... ..++|..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 150 (256)
T cd05112 82 EHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFV 150 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeec
Confidence 9999999987433 3589999999999999999999998 9999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=190.80 Aligned_cols=146 Identities=18% Similarity=0.200 Sum_probs=125.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc------cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH------WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~------~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|... +++.+|+|.+...... ......+.+.+|+.++..++|||++++++++...+ ..+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 84 (272)
T cd06629 7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE--YLS 84 (272)
T ss_pred ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC--ceE
Confidence 68999999999999876 6889999987532211 01112356889999999999999999999998876 789
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.++++.. ..+++..+..++.+++.||.|||+. +++||||+|+||++++++.+||+|||+++...
T Consensus 85 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 85 IFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred EEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999754 3589999999999999999999998 99999999999999999999999999987643
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=199.88 Aligned_cols=146 Identities=21% Similarity=0.236 Sum_probs=121.6
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---- 432 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 432 (521)
++|. +.||+|+||.||+++.. +|..||+|++..... .......+.+|+.++..++||||+++++++.....
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ--NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc--chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4444 78999999999999986 688999999854321 12334568899999999999999999999864431
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
...++||||+++ ++.+.++. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 146999999976 67766642 378899999999999999999999 9999999999999999999999999999
Q ss_pred hhc
Q 009972 513 FLL 515 (521)
Q Consensus 513 ~~~ 515 (521)
+..
T Consensus 171 ~~~ 173 (359)
T cd07876 171 RTA 173 (359)
T ss_pred ccc
Confidence 764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.8e-22 Score=201.16 Aligned_cols=135 Identities=14% Similarity=0.151 Sum_probs=118.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|..... ....|+.++++++||||+++++++.... ..++|+||+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----------~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 139 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----------TTLIEAMLLQNVNHPSVIRMKDTLVSGA--ITCMVLPHY 139 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcc----------ccHHHHHHHHhCCCCCCcChhheEEeCC--eeEEEEEcc
Confidence 78999999999999987 5678888864211 2356999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
. |+|.+++.... ..++|..+..|+.||+.||.|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 140 ~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 140 S-SDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred C-CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 5 58999886433 4689999999999999999999999 9999999999999999999999999999753
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=193.83 Aligned_cols=140 Identities=19% Similarity=0.273 Sum_probs=123.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||.||++... ++..||+|.+.... ....+.+.+|+.++++++|+||+++++.+...+ ..++||||+
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--~~~lv~e~~ 101 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD--ELWVVMEFL 101 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecch----HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC--eEEEEEeCC
Confidence 56999999999999886 68899999874322 223456889999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++++|.+++... .+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+
T Consensus 102 ~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (292)
T cd06658 102 EGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 168 (292)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence 999999988532 489999999999999999999999 9999999999999999999999999998764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-21 Score=191.15 Aligned_cols=143 Identities=20% Similarity=0.098 Sum_probs=117.7
Q ss_pred hhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHh---ccCCCccceeeeEeecCCCCceEEEEe
Q 009972 365 IIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLA---RINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~---~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+||+|+||.||+++.. +++.+|+|.+....... ......+.+|..++. ..+|||++.+.+++...+ ..++|||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e 77 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD--KLCFILD 77 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEcccccc-chHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC--eEEEEEe
Confidence 4899999999999986 68899999885433211 112233445544433 347999999999998776 7899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|+++|+|.+++.... .++|..+..|+.|++.||+|||+. +|+||||||+|||+++++.++|+|||+++..
T Consensus 78 ~~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~ 147 (279)
T cd05633 78 LMNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (279)
T ss_pred cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence 999999999986443 489999999999999999999999 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=193.91 Aligned_cols=142 Identities=20% Similarity=0.236 Sum_probs=121.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +++.||+|.+..+... .....+.+|+.+++.++|+||+++.+++.... ..++|+||+
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~lv~e~~ 85 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEE---GVPFTAIREASLLKGLKHANIVLLHDIIHTKE--TLTFVFEYM 85 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC---CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC--eEEEEEecc
Confidence 68999999999999886 6889999998543221 22345788999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+ +++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++..
T Consensus 86 ~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 86 H-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAK 153 (291)
T ss_pred c-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccccccc
Confidence 6 68887775332 3478889999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-21 Score=188.96 Aligned_cols=144 Identities=15% Similarity=0.101 Sum_probs=126.1
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCC
Q 009972 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|++|.||+++.. +++.+|+|.+.... .......+.+.+|+.+++.++||||+++++++.+.+ ..++|+||+++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRH-IVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK--YIYMLMEYCLG 77 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhc-chhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC--ccEEEEecCCC
Confidence 689999999999997 48899999885432 112234567999999999999999999999998776 78999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 445 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+|.+++.... .+++..+..++.+++.||+|||+. +++|+||||+||++++++.+||+|||+++.+..
T Consensus 78 ~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~ 145 (262)
T cd05572 78 GELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS 145 (262)
T ss_pred CcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence 99999997443 489999999999999999999998 999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.5e-22 Score=192.40 Aligned_cols=144 Identities=24% Similarity=0.324 Sum_probs=122.1
Q ss_pred hhhCcCCCeeEEEEEeCC-------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMKG-------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+..+ +..+|+|.+.... .......+.+|+.+++.++||||++++++|.... ..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA---TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE--PQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc---chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC--CeE
Confidence 368999999999998753 2468888774322 1223457899999999999999999999998776 789
Q ss_pred EEEeeCCCCChhhhhhcC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-----Ceee
Q 009972 437 LVFDYASNGTLYEHLHYG-----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-----SPKV 506 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-----~~kl 506 (521)
+||||+++|+|.++++.. ....++|.++..++.+++.||+|||+. +++|+||||+||+++++. .+|+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 999999999999999742 123479999999999999999999998 999999999999999877 8999
Q ss_pred CCCchhhhc
Q 009972 507 SPLCLSFLL 515 (521)
Q Consensus 507 ~DfGla~~~ 515 (521)
+|||+++.+
T Consensus 153 ~dfg~~~~~ 161 (269)
T cd05044 153 GDFGLARDI 161 (269)
T ss_pred CCccccccc
Confidence 999998754
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=190.21 Aligned_cols=146 Identities=17% Similarity=0.216 Sum_probs=126.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc--cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|++|.||+++.. +++.+|+|.+...... ......+.+.+|++++++++|+||+++++++.+.+ ..++|+|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~v~e 83 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS--HFNLFVE 83 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC--eEEEEEe
Confidence 67999999999999874 6889999988543311 11224567999999999999999999999998776 7899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-~~kl~DfGla~~~~ 516 (521)
|+++++|.+++.... ++++..+..++.|++.||+|||+. +++|+||||+||+++.++ .+||+|||+++.+.
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 84 WMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred ccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 999999999996433 589999999999999999999999 999999999999998776 59999999987654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=193.24 Aligned_cols=146 Identities=16% Similarity=0.107 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEe----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+++. .+|..||+|.+............+.+.+|+.++.++ +|+||+++++++..+. ..++|
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~--~~~lv 83 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT--KLHLI 83 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC--eEEEE
Confidence 6799999999999987 367899999985432222223345688999999999 6999999999988776 78999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... .+++.+...++.+++.||+|||+. +++||||||+|||+++++.+||+|||+++.+.
T Consensus 84 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 84 LDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 99999999999996443 588999999999999999999998 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-21 Score=192.06 Aligned_cols=147 Identities=20% Similarity=0.202 Sum_probs=125.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... +++.+|+|.+..... .....++.+|++++++++||||++++++|....+...++||||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 83 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN---PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYC 83 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCc---hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEec
Confidence 68999999999999996 578899998753321 13456789999999999999999999998765444689999999
Q ss_pred CCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.. .....+++.....++.++++||+|||+. +++|+||+|+||++++++.++|+|||++..+.
T Consensus 84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999998753 2234588999999999999999999998 99999999999999999999999999987543
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-21 Score=188.16 Aligned_cols=147 Identities=30% Similarity=0.449 Sum_probs=127.3
Q ss_pred hhhhCcCCCeeEEEEEeCC-----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 363 SNIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
.+.||+|+||.||+++..+ +..||+|.+..... ....+.+.+|++++..++|+||+++++++...+ ..++
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~ 78 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD---EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE--PLMI 78 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC---hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--eeEE
Confidence 3679999999999999864 37899998843221 124567999999999999999999999998876 7999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|||+++++|.+++.......+++.++..++.+++.||+|||+. +++||||||+||++++++.++|+|||+++....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 99999999999999754432389999999999999999999999 999999999999999999999999999986543
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=199.41 Aligned_cols=148 Identities=18% Similarity=0.203 Sum_probs=122.7
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---- 432 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 432 (521)
++|. +.||+|+||.||++... .++.||+|++..... .......+.+|+.+++.++||||+++++++.....
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc--ChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4554 78999999999999886 688999998853321 22334568899999999999999999998864321
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCccc
Confidence 146999999976 67777642 378999999999999999999999 9999999999999999999999999999
Q ss_pred hhccc
Q 009972 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+....
T Consensus 167 ~~~~~ 171 (355)
T cd07874 167 RTAGT 171 (355)
T ss_pred ccCCC
Confidence 87543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-21 Score=186.90 Aligned_cols=142 Identities=18% Similarity=0.267 Sum_probs=126.7
Q ss_pred hhhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+..+ +..+++|.+.... ..+++.+|++++++++||||+++++++.... ..++++||+
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~l~~e~~ 80 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE------DLQEIIKEISILKQCDSPYIVKYYGSYFKNT--DLWIVMEYC 80 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCC--cEEEEEecC
Confidence 789999999999999974 7899999874321 1467999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... ..++|..+..++.+++.||.|||+. +++||||+|+||++++++.+||+|||++..+..
T Consensus 81 ~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 81 GAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 9999999986433 4689999999999999999999999 999999999999999999999999999887643
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-21 Score=192.11 Aligned_cols=147 Identities=18% Similarity=0.177 Sum_probs=125.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|..+ +++.+++|.+...... ......+.+|+.++.+++||||+++++++...+....++||||+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~ 88 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYV 88 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhc
Confidence 78999999999999997 5889999998544322 22234577899999999999999999998876333899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++ +|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+..
T Consensus 89 ~~-~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 89 EH-DLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred Cc-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 85 9999886433 3589999999999999999999998 999999999999999999999999999886543
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=215.31 Aligned_cols=151 Identities=13% Similarity=0.124 Sum_probs=124.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+++.. ++..+|+|.+.... ........|..|+.++..++|||||++++++........++||||+
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~--l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~ 96 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG--LKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFC 96 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccc--cCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCC
Confidence 78999999999999987 56788888875432 2233456789999999999999999999988654433689999999
Q ss_pred CCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCC----CCeeecCCCCCCeeecC----------------
Q 009972 443 SNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELG----PPFTISELNSSAVYLTE---------------- 500 (521)
Q Consensus 443 ~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivH~dlk~~NILld~---------------- 500 (521)
++|+|.++|... ....+++..++.|+.||+.||+|||+... .+||||||||+||||+.
T Consensus 97 ~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n 176 (1021)
T PTZ00266 97 DAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN 176 (1021)
T ss_pred CCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence 999999999642 22458999999999999999999998521 25999999999999964
Q ss_pred -CCCeeeCCCchhhhcc
Q 009972 501 -DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 -~~~~kl~DfGla~~~~ 516 (521)
...+||+|||+++.+.
T Consensus 177 g~~iVKLsDFGlAr~l~ 193 (1021)
T PTZ00266 177 GRPIAKIGDFGLSKNIG 193 (1021)
T ss_pred CCCceEEccCCcccccc
Confidence 2358999999998754
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=193.13 Aligned_cols=144 Identities=15% Similarity=0.224 Sum_probs=124.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|..+|+|.+...... ......+.+|++++++++||||+++++++.+.. ..++|+||+
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 81 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELKHKNIVRLYDVLHSDK--KLTLVFEYC 81 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeeccccc--ccCccchhHHHHHHHhcCCCCeeeHHHHhccCC--ceEEEEecC
Confidence 67999999999999986 6889999998543321 223346788999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ ++|.+++.... ..+++.....++.||++||.|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 82 ~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 150 (284)
T cd07839 82 D-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFG 150 (284)
T ss_pred C-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccC
Confidence 7 48888876432 3589999999999999999999999 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-21 Score=193.00 Aligned_cols=141 Identities=16% Similarity=0.231 Sum_probs=124.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||.||++... +++.||+|.+..+.. ...+.+.+|+.++..++||||+++++++...+ ..++|+||+
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~iv~e~~ 100 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE--ELWVLMEFL 100 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc----chHHHHHHHHHHHHhCCCCchhhhhhheeeCC--eEEEEEecC
Confidence 47999999999999986 688999999854322 22456889999999999999999999998776 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.. ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 101 ~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~ 168 (297)
T cd06659 101 QGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS 168 (297)
T ss_pred CCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcc
Confidence 99999998753 2489999999999999999999999 99999999999999999999999999987653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=190.38 Aligned_cols=146 Identities=16% Similarity=0.117 Sum_probs=128.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..+|+|.+..+.. ......+.+.+|++++++++||||+++++++.+.+ ..++|+||+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 82 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC-VEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE--NMYLVVDLL 82 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhh-cchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC--eEEEEEeCC
Confidence 78999999999999987 688999999854322 22234567999999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++... .++++..+..++.++++||.|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 83 ~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 152 (258)
T cd05578 83 LGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTP 152 (258)
T ss_pred CCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence 999999999644 3589999999999999999999998 999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=191.06 Aligned_cols=145 Identities=16% Similarity=0.160 Sum_probs=120.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHH-HhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+++.. +|+.||+|++..... .....++..|+.. ++..+||||+++++++..++ ..+++|||
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~--~~~lv~e~ 81 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN---SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG--DVWICMEV 81 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCC---cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC--cEEEEhhh
Confidence 67999999999999987 689999998854321 1223455666665 56669999999999998776 79999999
Q ss_pred CCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++ |+|.+++... ....+++..+..++.|++.||+|||+.+ +++||||||+||++++++.+||+|||+++.+.
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 97 5888887532 2346899999999999999999999753 79999999999999999999999999988653
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-21 Score=187.98 Aligned_cols=144 Identities=22% Similarity=0.258 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +++.+++|.+...... ....+.+.+|+.++++++|+||+++++++...+ ..++|+||+
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE--KVYIFMEYC 81 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHHHHHHHHHHHHhCCCCChhheeeeEecCC--EEEEEEecC
Confidence 67999999999999986 6889999998544322 335678999999999999999999999988776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.++++... .+++..+..|+.+++.||+|||+. +++|+||+|+||++++++.+||+|||++..+.
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~ 150 (264)
T cd06626 82 SGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK 150 (264)
T ss_pred CCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccC
Confidence 9999999997443 478999999999999999999998 99999999999999999999999999988764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-21 Score=187.89 Aligned_cols=152 Identities=19% Similarity=0.182 Sum_probs=127.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... ++..+|+|.+.... ......+++.+|+.++++++||||+++++++........+++|||+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~ 83 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGN--MTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYC 83 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEeccc--CCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhc
Confidence 67999999999999886 67889999875432 2233456788999999999999999999988754434689999999
Q ss_pred CCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTEL--GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++... ....+++..+..++.+++.||+|||..+ ..+++|+||||+||++++++.+||+|||+++.+..
T Consensus 84 ~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 84 EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGH 162 (265)
T ss_pred cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccC
Confidence 999999998642 2346899999999999999999999322 23999999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=189.43 Aligned_cols=142 Identities=17% Similarity=0.120 Sum_probs=124.6
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCC
Q 009972 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||.||+++.. +|+.+++|.+..... ......+.+.+|++++.+++||||+++++.+.... ..+++|||+++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM-IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK--NLYLVMEYLPG 77 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhh-hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc--EEEEEEecCCC
Confidence 689999999999997 489999998854322 12234567899999999999999999999988766 79999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 445 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||++++++.+||+|||+++..
T Consensus 78 ~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~ 143 (265)
T cd05579 78 GDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVG 143 (265)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhc
Confidence 99999997433 589999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=190.17 Aligned_cols=144 Identities=18% Similarity=0.263 Sum_probs=124.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. +|..||+|.+...... .....+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 80 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE---GTPSTAIREISLMKELKHENIVRLHDVIHTEN--KLMLVFEYM 80 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccc---cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC--cEEEEEecC
Confidence 78999999999999996 6889999988543221 22345788999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++ +|.+++.... ...+++..+.+++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~ 151 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFG 151 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence 85 8998886433 24589999999999999999999998 99999999999999999999999999998653
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=191.77 Aligned_cols=141 Identities=16% Similarity=0.234 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||.|++|.||+|+.. +++.|++|.+..... ...+.+.+|+.+++.++|||++++++++...+ ..++|+||+
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 98 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ----PKKELIINEILVMKELKNPNIVNFLDSFLVGD--ELFVVMEYL 98 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccC----chHHHHHHHHHHHHhcCCCceeeeeeeEecCc--eEEEEEEec
Confidence 67999999999999875 788999998854322 22456889999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... .++|.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~ 166 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQIT 166 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence 999999998632 489999999999999999999999 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=190.27 Aligned_cols=145 Identities=21% Similarity=0.295 Sum_probs=127.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. +|+.||+|++..... .......+.+|+.++++++||||+++++++.... ..++||||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~v~e~~ 81 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRL--EGGIPNQALREIKALQACQHPYVVKLLDVFPHGS--GFVLVMEYM 81 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccc--cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC--eeEEEeccc
Confidence 67999999999999986 688999999855432 1233467899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++|.+++.... ..+++.++..++.++++||+|||+. +++|+||||+||++++++.++|+|||+++.+..
T Consensus 82 -~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 82 -PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSE 151 (286)
T ss_pred -CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence 999999986433 4689999999999999999999998 999999999999999999999999999887643
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-21 Score=190.23 Aligned_cols=157 Identities=21% Similarity=0.238 Sum_probs=129.1
Q ss_pred HHHHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEe
Q 009972 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYC 427 (521)
Q Consensus 352 ~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~ 427 (521)
+.++..+...|. +.||+|+||.||+|+.. +++.+|+|.+.... ....++..|+.++.++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-----DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-----HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 334444444454 78999999999999986 67889999874332 2234688899999998 799999999998
Q ss_pred ecC----CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 009972 428 RES----SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 428 ~~~----~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~ 503 (521)
... .....+++|||+++|+|.+++.......+++..+..++.|++.||+|||+. +++||||||+||++++++.
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 532 123689999999999999999754445688999999999999999999999 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009972 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
++|+|||+++...
T Consensus 160 ~~l~dfg~~~~~~ 172 (282)
T cd06636 160 VKLVDFGVSAQLD 172 (282)
T ss_pred EEEeeCcchhhhh
Confidence 9999999987653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.8e-21 Score=186.48 Aligned_cols=143 Identities=22% Similarity=0.250 Sum_probs=126.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +++.+++|.+..... ...+.+.+|+.++++++||||+++++++...+ ..+++|||+
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~l~~e~~ 82 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPG----DDFEIIQQEISMLKECRHPNIVAYFGSYLRRD--KLWIVMEYC 82 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCch----hhHHHHHHHHHHHHhCCCCChhceEEEEEeCC--EEEEEEeCC
Confidence 68999999999999986 578899998854322 23467899999999999999999999998776 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++... ...+++.++..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++..+.
T Consensus 83 ~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 152 (262)
T cd06613 83 GGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLT 152 (262)
T ss_pred CCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhh
Confidence 999999998643 23589999999999999999999998 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-21 Score=188.61 Aligned_cols=143 Identities=22% Similarity=0.260 Sum_probs=126.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||.|++|.||+|+.. +++.+|+|.+.... .......+.+|+.+++.++|+|++++++++.++. ..++|+||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 81 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE---AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS--KLWIIMEYC 81 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccc---cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC--eEEEEEEee
Confidence 67999999999999987 68899999885432 1223456889999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.++++.. .+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||+++.+..
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 150 (274)
T cd06609 82 GGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTS 150 (274)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence 999999999643 589999999999999999999998 999999999999999999999999999987654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=187.89 Aligned_cols=147 Identities=17% Similarity=0.257 Sum_probs=127.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|..+ +|..+|+|.+..... .....+.+.+|+.++++++|+||+++++++.... ..++|+||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~~ 81 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKHPNIVTFFASFQENG--RLFIVMEYC 81 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhc--cchhhHHHHHHHHHHHhCCCCChhhhhheeccCC--eEEEEEecC
Confidence 78999999999999997 578899998754321 1223457889999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-~~kl~DfGla~~~~~ 517 (521)
++++|.+++.......++|..+..++.++++||+|||+. +++|+||||+||++++++ .+||+|||.+..+.+
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 999999999755545689999999999999999999998 999999999999999875 579999999876543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=194.41 Aligned_cols=137 Identities=16% Similarity=0.066 Sum_probs=107.8
Q ss_pred hhhCcCCCeeEEEEEeC--CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||+||+|.++ +++.+|||++...... ......+.|.+|++++.+++|+|+++.+..+ . ..++|||
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~--~~~LVmE 98 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G--KDGLVRG 98 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C--CcEEEEE
Confidence 78999999999999875 5677899986422110 1123456799999999999999999533222 2 5799999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC-CCCCeeecCCCCeeeCCCchhhhccc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL-NSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dl-k~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+++++|... . .. . ...++.++++||+|||+. +|+|||| ||+|||++.++.+||+|||+|+.+..
T Consensus 99 ~~~G~~L~~~-~-~~----~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 99 WTEGVPLHLA-R-PH----G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred ccCCCCHHHh-C-cc----c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 9999999732 1 11 1 146788999999999999 9999999 99999999999999999999997653
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-21 Score=187.94 Aligned_cols=144 Identities=19% Similarity=0.237 Sum_probs=127.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++..+ +++.+|+|.+..... ....+++.+|++++++++||||+++++++...+ ..++++||+
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN---EAIQKQILRELDILHKCNSPYIVGFYGAFYNNG--DISICMEYM 81 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC---hHHHHHHHHHHHHHHHCCCCchhhhheeeecCC--EEEEEEEec
Confidence 78999999999999997 688999998854322 234567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... ..+++.....++.+++.||+|||+ . +++||||||+||++++++.+||+|||.++.+.
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~ 152 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV 152 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence 9999999997432 468999999999999999999999 7 99999999999999999999999999987654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=198.31 Aligned_cols=144 Identities=17% Similarity=0.177 Sum_probs=121.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----CCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
+.||+|+||.||++... .++.||||++..... .....+.+.+|+.+++.++||||+++++++.... ....++|
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv 107 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCcccc--CchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEE
Confidence 78999999999999986 678999998853321 1233456889999999999999999999876432 1147999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++ +|.+++.. .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 108 ~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 108 MELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred EeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 999976 78777742 378999999999999999999999 999999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.7e-22 Score=202.35 Aligned_cols=145 Identities=21% Similarity=0.341 Sum_probs=127.8
Q ss_pred hhhCcCCCeeEEEEEeC--CCC--EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK--GGP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~--~~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|.||.|++|.|. +|+ .||||.+...... ....+|.+|+.+|.+++|||+|+|+|...+. ...||+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~---~~mddflrEas~M~~L~H~hliRLyGvVl~q---p~mMV~ 189 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN---AIMDDFLREASHMLKLQHPHLIRLYGVVLDQ---PAMMVF 189 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc---hhHHHHHHHHHHHHhccCcceeEEeeeeccc---hhhHHh
Confidence 78999999999999986 343 6899988544322 2567899999999999999999999999874 478999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|.++.|+|.+.|+......|-......++.|||.||.||.++ ++|||||.++|+||...-.+||+||||.|-+..
T Consensus 190 ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 999999999999874556788889999999999999999999 999999999999999999999999999997653
|
|
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-21 Score=187.98 Aligned_cols=142 Identities=20% Similarity=0.258 Sum_probs=124.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... ++..+|+|.+..... ....+.+.+|+.++.+++||||+++++++.... ..++||||+
T Consensus 10 ~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 84 (277)
T cd06641 10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIMEYL 84 (277)
T ss_pred eeEeecCCeEEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC--eEEEEEEeC
Confidence 67999999999999875 678999998743221 223457899999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. ..+++.....++.+++.|+.|||+. +++|+||||+||+++.++.++|+|||+++.+.
T Consensus 85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06641 85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 152 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecc
Confidence 99999999863 2489999999999999999999998 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-21 Score=187.33 Aligned_cols=149 Identities=23% Similarity=0.290 Sum_probs=122.8
Q ss_pred hhhhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----Cc
Q 009972 363 SNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FT 434 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~ 434 (521)
.+.||+|+||.||+|.+. ++..||+|.+..+.. .....+++.+|+.++++++||||+++++++..... ..
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF--SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC--ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 367999999999999864 367899998854321 22334578999999999999999999998865321 12
Q ss_pred eEEEEeeCCCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCc
Q 009972 435 RMLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 435 ~~lv~ey~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfG 510 (521)
.++++||+++|+|.+++... ....+++....+++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECccc
Confidence 47899999999999887522 123579999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcc
Q 009972 511 LSFLLV 516 (521)
Q Consensus 511 la~~~~ 516 (521)
+++.+.
T Consensus 159 ~~~~~~ 164 (273)
T cd05074 159 LSKKIY 164 (273)
T ss_pred cccccc
Confidence 998653
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-21 Score=187.67 Aligned_cols=142 Identities=19% Similarity=0.245 Sum_probs=125.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... ++..||+|.+..... ......+.+|+.++++++||||+++++++.+.. ..++||||+
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT--KLWIIMEYL 84 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEecccc---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEecC
Confidence 67999999999999986 578899998753321 233467899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. .++++.+...++.+++.||+|||+. +++|+||+|+||++++++.++|+|||+++.+.
T Consensus 85 ~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06640 85 GGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceecc
Confidence 99999999863 2488999999999999999999998 99999999999999999999999999997654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-21 Score=187.90 Aligned_cols=144 Identities=19% Similarity=0.086 Sum_probs=118.0
Q ss_pred hhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH---HHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 365 IIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA---DLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~---~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+||+|+||.||+++.. +++.||+|.+..+..... .....+..|.. .++...||||+++.+++.+.+ ..++|||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~e 77 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFILD 77 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccc-hhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC--EEEEEEe
Confidence 4899999999999886 588999998865432211 11222344433 444558999999999998776 7899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++... ..++|..+..|+.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 78 ~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~ 148 (278)
T cd05606 78 LMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 148 (278)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence 99999999988643 3589999999999999999999998 99999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-21 Score=185.99 Aligned_cols=146 Identities=19% Similarity=0.226 Sum_probs=126.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... +++.+|+|.+.... ........+.+|++++++++|||++++++.+...+ ..++||||+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQ--MTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK--ALMIVMEYA 81 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccc--cccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC--EEEEEEecC
Confidence 68999999999999886 67889999985432 22334567999999999999999999999987766 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~-~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......+++..+.+++.++++||+|||+. +++||||||+||+++++ +.+||+|||+++.+.
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (256)
T cd08220 82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILS 153 (256)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence 999999999765445689999999999999999999998 99999999999999855 568999999988654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-21 Score=177.60 Aligned_cols=143 Identities=12% Similarity=0.119 Sum_probs=109.8
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchh----------------------hHHHHHHHHHHHhccCCCccc
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGY----------------------LELYFQREVADLARINHENTG 421 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~----------------------~~~~~~~E~~~l~~l~H~niv 421 (521)
..||+|++|.||+|..++|+.||+|.+.......... ......+|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 5799999999999999889999999986542110000 012234599999999888875
Q ss_pred eeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeeecCCCCCCeeecC
Q 009972 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL-HTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~dlk~~NILld~ 500 (521)
....+... ..++||||++++++....... ..+++.+...++.+++.+|.|+ |+. +|+||||||+|||++
T Consensus 83 ~p~~~~~~----~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 83 CPEPILLK----SHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCcEEEec----CCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 44443322 348999999998776543222 3588999999999999999999 577 999999999999998
Q ss_pred CCCeeeCCCchhhhcc
Q 009972 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.++|+|||+|...+
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 4789999999998543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-21 Score=190.11 Aligned_cols=151 Identities=23% Similarity=0.307 Sum_probs=125.7
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---- 431 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---- 431 (521)
.++|. +.||+|+||.||+|..+ +++.||+|.+...... ......+.+|+.++++++||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc--cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34454 78999999999999997 5889999988544321 123346788999999999999999999987543
Q ss_pred ----CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeC
Q 009972 432 ----PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 432 ----~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~ 507 (521)
....++|+||+++ ++...+... ...+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeC
Confidence 2268999999986 777777543 33589999999999999999999999 99999999999999999999999
Q ss_pred CCchhhhcc
Q 009972 508 PLCLSFLLV 516 (521)
Q Consensus 508 DfGla~~~~ 516 (521)
|||+++.+.
T Consensus 159 dfg~~~~~~ 167 (302)
T cd07864 159 DFGLARLYN 167 (302)
T ss_pred ccccccccc
Confidence 999998754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=199.39 Aligned_cols=146 Identities=22% Similarity=0.208 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-C-----CccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H-----ENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~~~ 436 (521)
++||+|+||.|.||... +++.||||+++.+. ....+...|+.+|..++ | -|+|++++|+...+ +.+
T Consensus 192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~--Hlc 264 (586)
T KOG0667|consen 192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN--HLC 264 (586)
T ss_pred EEecccccceeEEEEecCCCcEEEEEeeccCh-----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc--cee
Confidence 89999999999999886 68999999985443 22345678999999996 4 58999999999887 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC--CCeeeCCCchhhh
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED--FSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~--~~~kl~DfGla~~ 514 (521)
||+|.++. +|+++|+......++......|+.||+.||.+||.. +|||+||||+||||-+. ..+||+|||.|.+
T Consensus 265 iVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 265 IVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence 99999987 999999977777799999999999999999999998 99999999999999643 4899999999998
Q ss_pred cccccc
Q 009972 515 LVSSII 520 (521)
Q Consensus 515 ~~~~~~ 520 (521)
.....+
T Consensus 341 ~~q~vy 346 (586)
T KOG0667|consen 341 ESQRVY 346 (586)
T ss_pred cCCcce
Confidence 776554
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.1e-21 Score=190.57 Aligned_cols=145 Identities=21% Similarity=0.223 Sum_probs=124.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+...... .....+++.+|++++++++||||+++.++|.+.+ ..++|+||+
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 97 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH--TAWLVMEYC 97 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccC-cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC--eEEEEHHhh
Confidence 68999999999999986 6889999987533221 2233457889999999999999999999998877 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ |++.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||+++...
T Consensus 98 ~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 98 L-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred C-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 7 57877775332 3589999999999999999999998 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.2e-21 Score=185.46 Aligned_cols=146 Identities=20% Similarity=0.278 Sum_probs=127.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|... ++..+++|++...... ...+.+.+|+++++.++|+|++++++.+...+ ..++|+||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~iv~e~~ 81 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ---TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD--ELWLVMPYL 81 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc---hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC--EEEEEEecc
Confidence 78999999999999976 6788999987433221 13467899999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.++++.... ..+++.....++.|++.||+|||+. +++||||||+||++++++.+||+|||++..+..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLAD 154 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence 99999999975322 4689999999999999999999998 999999999999999999999999999886653
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-21 Score=199.84 Aligned_cols=136 Identities=16% Similarity=0.168 Sum_probs=118.2
Q ss_pred hhhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||++... .+..||+|.+... ..+.+|++++++++||||+++++++.... ..++|||
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv~e 166 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRWKS--TVCMVMP 166 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEeeCC--EEEEEeh
Confidence 78999999999999764 3567888876321 13568999999999999999999998776 7899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+. ++|.+++.. ...++|.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 167 ~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 167 KYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred hcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 996 589998843 23589999999999999999999999 99999999999999999999999999997654
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-21 Score=185.60 Aligned_cols=143 Identities=20% Similarity=0.284 Sum_probs=128.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+++.. +++.|++|++...... ...+.+.+|+..+.+++|+|++++++++...+ ..++|+||+
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE---EFRKQLLRELKTLRSCESPYVVKCYGAFYKEG--EISIVLEYM 81 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC--eEEEEEEec
Confidence 78999999999999997 5899999988544321 34567999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++... ..+++..+..++.++++|++|||+ . +++||||+|+||++++++.++|+|||+++.+.
T Consensus 82 ~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~ 151 (264)
T cd06623 82 DGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLE 151 (264)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999644 458999999999999999999999 8 99999999999999999999999999988654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-21 Score=186.03 Aligned_cols=144 Identities=14% Similarity=0.084 Sum_probs=118.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHH-HhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|... +++.||+|.+...... .......+..|..+ ....+|+|++++++++...+ ..++|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI-AKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD--YLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh-HHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC--eEEEEEec
Confidence 35899999999999886 6889999987533211 11122334455544 44558999999999998776 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||+++..
T Consensus 79 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 79 LNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred cCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999996433 488999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-21 Score=187.50 Aligned_cols=142 Identities=20% Similarity=0.291 Sum_probs=124.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC---CCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. +++.+|+|.+..+.. ....+++.+|+.++++++ |||++++++++.... ..++||
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~--~~~lv~ 81 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP---DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP--RLWIIM 81 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCC---chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC--EEEEEE
Confidence 67999999999999985 688999998754321 223456889999999986 999999999998766 789999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++++|.++++.. .+++.....++.+++.||.|||+. +++||||+|+||++++++.++|+|||+++.+.
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 999999999998643 589999999999999999999999 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-21 Score=193.27 Aligned_cols=144 Identities=20% Similarity=0.246 Sum_probs=123.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|... ++..+|+|++...... ......+.+|+.++.++ +||||+++++++...+....++||||
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~ 90 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN--ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEY 90 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc--chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecc
Confidence 78999999999999986 6788999988432211 12234577899999999 99999999999876543368999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++ ++|.+++... .++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 91 ~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 91 ME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred cc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 98 5999988643 589999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.8e-21 Score=188.94 Aligned_cols=145 Identities=19% Similarity=0.242 Sum_probs=126.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|..+ +|..||+|++...... ......+.+|++++++++|||++++++++.+.+ ..+++|||+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~--~~~iv~e~~ 80 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETED--EGVPSTAIREISLLKELNHPNIVRLLDVVHSEN--KLYLVFEFL 80 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc--ccchhHHHHHHHHHHhcCCCCccCHhheeccCC--eEEEEEecc
Confidence 67999999999999986 7899999988543221 223356889999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ ++|.+++.......+++..+..++.++++||+|||+. +++||||+|+||++++++.++|+|||+++.+.
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~ 150 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFG 150 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence 6 6999998754434689999999999999999999998 99999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.3e-21 Score=189.21 Aligned_cols=141 Identities=16% Similarity=0.226 Sum_probs=124.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... +++.|++|.+..... ...+.+.+|+.++++++|||++++++++...+ ..++|+||+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~e~~ 98 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ----PKKELIINEILVMRENKHPNIVNYLDSYLVGD--ELWVVMEYL 98 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccc----hHHHHHHHHHHHHhhcCCCCeeehhheeeeCC--cEEEEEecC
Confidence 78999999999999875 678899998743321 22456889999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... .+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||++..+.
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~ 166 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence 999999998643 378999999999999999999999 99999999999999999999999999876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.9e-21 Score=190.85 Aligned_cols=146 Identities=22% Similarity=0.266 Sum_probs=124.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +|+.||+|.+...... ......+.+|+.++.+++|+||+++++++........++||||+
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 90 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER--DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYC 90 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC--CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecC
Confidence 78999999999999986 6899999988544321 12233467899999999999999999998765433689999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++ +|.+++.... ..+++.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 91 ~~-~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 91 EQ-DLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred CC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 75 8888886432 4689999999999999999999999 99999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.3e-21 Score=188.15 Aligned_cols=144 Identities=19% Similarity=0.256 Sum_probs=122.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|.+|.||+|+.. +++.||+|++...... ......+.+|++++++++||||+++++++.+.. ..++||||+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 83 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQED--EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--RLYLVFEYL 83 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhcccc--ccchHHHHHHHHHHHhccCCCEeeEEEEEecCC--eEEEEEecc
Confidence 68999999999999986 6889999987443221 223456889999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-~~~~kl~DfGla~~~ 515 (521)
+ ++|.+++.......+++.....++.+++.||+|||+. +++||||||+||++++ ++.+||+|||+++..
T Consensus 84 ~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 84 D-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred c-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 6 5888887644444468888899999999999999998 9999999999999985 567999999999764
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-21 Score=176.16 Aligned_cols=143 Identities=13% Similarity=0.154 Sum_probs=112.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccc----------------------hhhHHHHHHHHHHHhccCCCccc
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT----------------------GYLELYFQREVADLARINHENTG 421 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~----------------------~~~~~~~~~E~~~l~~l~H~niv 421 (521)
..||+|++|.||+|+..+|+.||||.+........ ......+.+|.+.+.+++|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 46999999999999988899999999865421100 00122356899999999999986
Q ss_pred eeeeEeecCCCCceEEEEeeCCCCChhhh-hhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeec
Q 009972 422 KLLGYCRESSPFTRMLVFDYASNGTLYEH-LHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~g~L~~~-l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld 499 (521)
....+... ..++||||++++++... +. . ..++..+...++.+++.++.|+|+ . +|+||||||+||+++
T Consensus 83 ~p~~~~~~----~~~lVmE~~~g~~~~~~~l~-~--~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 83 VPEPILLK----KNVLVMEFIGDDGSPAPRLK-D--VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CceEEEec----CCEEEEEEecCCCchhhhhh-h--ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 55554432 24899999998755443 32 2 246788899999999999999999 8 999999999999999
Q ss_pred CCCCeeeCCCchhhhccc
Q 009972 500 EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~~ 517 (521)
++.++|+|||+|+.+..
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 89999999999998764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-21 Score=177.21 Aligned_cols=147 Identities=20% Similarity=0.232 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEe-CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC---CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.+|+|+|+-||.++. .+++.+|+|++.... .+..+..++|++..++++|||++++++++..+. ..+.||++
T Consensus 27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~ 102 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHS----QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLL 102 (302)
T ss_pred eeecCCCceeeeeecccCcccchhhheeeccc----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEe
Confidence 7899999999999985 478899999985543 234567899999999999999999999985432 22589999
Q ss_pred eeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 440 DYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 440 ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
.|...|+|.+.+... ++..+++.+.+.|+.+|++||.+||+. .|+.+||||||.|||+.+++.+++.|||-++..
T Consensus 103 Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a 179 (302)
T KOG2345|consen 103 PYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQA 179 (302)
T ss_pred ehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence 999999999999743 344689999999999999999999996 567999999999999999999999999988754
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.8e-21 Score=191.14 Aligned_cols=143 Identities=19% Similarity=0.125 Sum_probs=123.4
Q ss_pred hhhCcC--CCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
..||+| +||+||+++.. +|+.||+|.+...... ....+.+.+|+.+++.++||||+++++++.... ..++|+|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~--~~~~v~e 79 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS--WLWVISP 79 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC--ceEEEEe
Confidence 457777 89999999986 7899999987543222 233467899999999999999999999998876 7899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
|+++|++.+++.......+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+.
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~ 149 (328)
T cd08226 80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLY 149 (328)
T ss_pred cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHh
Confidence 99999999998754444589999999999999999999998 99999999999999999999999998543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-21 Score=210.71 Aligned_cols=151 Identities=23% Similarity=0.282 Sum_probs=120.0
Q ss_pred HHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC--
Q 009972 357 VACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS-- 431 (521)
Q Consensus 357 ~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-- 431 (521)
+-..+|+ .+||+|+||.|||++.+ ||+.+|||++..+. +...-....+|++.+++++|||||+++..+.+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 4456676 68999999999999998 99999999997664 1233456889999999999999998775432100
Q ss_pred --------------------------------------------------------------------------------
Q 009972 432 -------------------------------------------------------------------------------- 431 (521)
Q Consensus 432 -------------------------------------------------------------------------------- 431 (521)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred ---------------------------C--------CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 009972 432 ---------------------------P--------FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476 (521)
Q Consensus 432 ---------------------------~--------~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~ 476 (521)
. ...||=||||+.-.++++++.+.... .-....+++++|+.||+
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLA 711 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHH
Confidence 0 12467788998877777776443211 24456789999999999
Q ss_pred HHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 477 YLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 477 yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
|+|++ +||||||||.||+||++..+||+|||+|+.
T Consensus 712 YIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 712 YIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATD 746 (1351)
T ss_pred HHHhC---ceeeccCCcceeEEcCCCCeeecccccchh
Confidence 99999 999999999999999999999999999987
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-21 Score=191.95 Aligned_cols=148 Identities=15% Similarity=0.134 Sum_probs=128.3
Q ss_pred hhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++.||+|.|+.|..+++- +|..||||++.+...+ ......+.+|++.|+-++|||||+|+.+..... ..|||+|.
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD--~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT--KlyLiLEL 98 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD--TLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT--KLYLILEL 98 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccc--hhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc--eEEEEEEe
Confidence 366999999999999885 8999999999655432 345567899999999999999999999987766 79999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeeeCCCchhhhcccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld-~~~~~kl~DfGla~~~~~~ 518 (521)
-++|+|++||.+.. ..+.+....+++.||..|+.|+|.- .+|||||||+||.+- .-|-+|+.|||++.-+.++
T Consensus 99 GD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred cCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 99999999997543 3489999999999999999999998 999999999999875 5689999999998776653
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-21 Score=187.05 Aligned_cols=150 Identities=22% Similarity=0.239 Sum_probs=126.8
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCC---
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS--- 431 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~--- 431 (521)
+++|. +.||+|++|.||+|..+ +++.+++|.+.... ...+++.+|+.+++++ +|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 34444 78999999999999996 57889999874332 1235789999999999 7999999999997543
Q ss_pred -CCceEEEEeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCC
Q 009972 432 -PFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 432 -~~~~~lv~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~D 508 (521)
....++||||+++++|.+++.... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 225899999999999999986432 34689999999999999999999999 999999999999999999999999
Q ss_pred Cchhhhcc
Q 009972 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||++....
T Consensus 157 ~~~~~~~~ 164 (275)
T cd06608 157 FGVSAQLD 164 (275)
T ss_pred Cccceecc
Confidence 99987543
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-21 Score=189.95 Aligned_cols=145 Identities=18% Similarity=0.196 Sum_probs=124.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|..+ +++.||+|.+..... .......+.+|++++++++|+||+++++++...+ ..++||||+
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~iv~e~~ 82 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESED--DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG--RLYLVFEYV 82 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcc--cccchhHHHHHHHHHHhcCCCCeeehhheEEECC--EEEEEEecC
Confidence 68999999999999987 578999998754322 1233467899999999999999999999998866 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++.+..+.... ..+++.++..++.+++.||+|||+. +++||||+|+||++++++.+||+|||+++.+..
T Consensus 83 ~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 83 ERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRA 152 (288)
T ss_pred CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence 987777665432 3489999999999999999999999 999999999999999999999999999887553
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.4e-21 Score=189.08 Aligned_cols=146 Identities=16% Similarity=0.165 Sum_probs=121.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCC---CceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSP---FTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~---~~~~lv 438 (521)
+.||+|+||.||+|... +++.||+|.+...... ......+.+|+.+++.++ ||||+++++++...+. ...++|
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv 84 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE--EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLV 84 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhccc--cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEE
Confidence 68999999999999986 6889999987543211 122356888999999995 6999999999876541 127999
Q ss_pred EeeCCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeeeCCCchhhh
Q 009972 439 FDYASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFL 514 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-~~~~kl~DfGla~~ 514 (521)
|||+++ +|.+++.... ...+++..+..++.||+.||+|||+. +++||||||+||+++. ++.+||+|||+++.
T Consensus 85 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 85 FEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred eeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 999986 8998886432 24589999999999999999999999 9999999999999998 89999999999875
Q ss_pred c
Q 009972 515 L 515 (521)
Q Consensus 515 ~ 515 (521)
+
T Consensus 161 ~ 161 (295)
T cd07837 161 F 161 (295)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=188.14 Aligned_cols=145 Identities=21% Similarity=0.234 Sum_probs=124.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. ++..+|+|.+...... .......+.+|++++++++|||++++++++.+.. ..++||||+
T Consensus 31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 107 (317)
T cd06635 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH--TAWLVMEYC 107 (317)
T ss_pred heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC-chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC--eEEEEEeCC
Confidence 67999999999999986 6789999987543222 2233457889999999999999999999998877 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ |++.+.+... ..+++|.++..++.+++.||.|||+. +|+||||+|+||++++++.+||+|||+++...
T Consensus 108 ~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (317)
T cd06635 108 L-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIAS 176 (317)
T ss_pred C-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence 7 5888877533 33589999999999999999999999 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=186.89 Aligned_cols=141 Identities=18% Similarity=0.246 Sum_probs=124.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+||+|+||.||++..+ ++..||+|++.... ......+.+|+.++++++|+|++++++++...+ ..++||||+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 99 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFL 99 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc----hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC--EEEEEEecC
Confidence 57999999999999886 68899999874322 223556899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++... .+++.....++.+++.||+|||+. +++||||||+||++++++.++|+|||++..+.
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~ 167 (292)
T cd06657 100 EGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 167 (292)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecc
Confidence 999999987532 479999999999999999999999 99999999999999999999999999886543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=184.88 Aligned_cols=142 Identities=19% Similarity=0.297 Sum_probs=126.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|..+ ++..+++|.+..... ..+.+.+|+++++.++|+|++++++++...+ ..++|+||+
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 97 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELIINEILIMKDCKHPNIVDYYDSYLVGD--ELWVVMEYM 97 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC--EEEEEEecc
Confidence 68999999999999997 688999998854322 3456889999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... ..+++..+..++.+++.||+|||+. +++|+||+|+||+++.++.+||+|||++..+.
T Consensus 98 ~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 98 DGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 9999999997543 3689999999999999999999998 99999999999999999999999999877543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-20 Score=185.69 Aligned_cols=145 Identities=17% Similarity=0.128 Sum_probs=120.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+++.. +++.+|+|.+...... .....+.+|+.++.++. |+||+++++++..+. ..+++|||
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~--~~~~~~e~ 84 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE---KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG--DCWICMEL 84 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccCh---HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC--cEEEEEec
Confidence 68999999999999986 6889999988543222 34567899999999996 999999999998766 78999999
Q ss_pred CCCCChhhhh---hcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHL---HYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++. ++.++. .......+++....+++.+++.||+|||+.+ +++||||||+||++++++.+||+|||+++.+.
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 875 555443 2223346899999999999999999999742 89999999999999999999999999997654
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.8e-22 Score=194.18 Aligned_cols=145 Identities=19% Similarity=0.274 Sum_probs=127.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|.||.||||... .++.||+|.+..... .....+.++|+.++..++++||.+++|.|..+. ..+++||||
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~---~deIediqqei~~Ls~~~~~~it~yygsyl~g~--~LwiiMey~ 93 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA---EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT--KLWIIMEYC 93 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhc---chhhHHHHHHHHHHHhcCcchHHhhhhheeecc--cHHHHHHHh
Confidence 68999999999999986 688999999865432 233457899999999999999999999998877 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
.+|++.+.+... ..+++....-|.+++..|+.|||++ +.+|||||+.|||+..+|.+|++|||++-.+...
T Consensus 94 ~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 94 GGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred cCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech
Confidence 999999999633 2457888888999999999999999 9999999999999999999999999998876543
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.3e-22 Score=183.10 Aligned_cols=141 Identities=15% Similarity=0.167 Sum_probs=121.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCC--CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS--PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~--~~~~~lv~ 439 (521)
++||-|-.|+|..+..+ +++.+|+|.+.. ....++|++..-.. .|||||+++++|++.- .....+||
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D---------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVm 138 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD---------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVM 138 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhc---------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeee
Confidence 79999999999999987 788899998721 12457888875554 7999999999997532 22578999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld---~~~~~kl~DfGla~~~~ 516 (521)
|.|++|.|++.+..++...+++++..+|+.+|+.|+.|||+. .|.||||||+|+|.. .+-.+||+|||+||.-.
T Consensus 139 E~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 139 ECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred ecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccC
Confidence 999999999999988778899999999999999999999999 999999999999996 45679999999999754
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.8e-22 Score=192.13 Aligned_cols=152 Identities=18% Similarity=0.127 Sum_probs=132.3
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.|. .+||+|+||.||-++.+ +|+.+|.|++.+|+-. .+..+.-..+|-.+|.++..+.||.+--.|++.+ ..+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiK-kr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd--~LC 261 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIK-KRKGETMALNEKQILEKVSSPFIVSLAYAFETKD--ALC 261 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHH-HhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC--ceE
Confidence 3454 79999999999999887 7999999998665422 2233455788999999999999999988888877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+..|.+|+|.-+|...+...+++.+.+-+|.+|+-||++||++ +||+||+||+|||||++|+++|+|.|||--+.
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 999999999999998766656799999999999999999999999 99999999999999999999999999997654
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 339 ~ 339 (591)
T KOG0986|consen 339 E 339 (591)
T ss_pred C
Confidence 3
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-20 Score=184.78 Aligned_cols=140 Identities=17% Similarity=0.253 Sum_probs=123.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... +++.+++|++.... ....+.+.+|+.+++.++||||+++++++...+ ..++++||+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~--~~~~v~e~~ 98 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD--ELWVVMEFL 98 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC--eEEEEEecc
Confidence 68999999999999975 68889999874322 123456889999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++++|.+++.. ..+++..+..++.+++.||+|||+. +++||||+|+||++++++.++|+|||+++..
T Consensus 99 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 99 EGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred CCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 99999999864 2489999999999999999999999 9999999999999999999999999988754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=183.54 Aligned_cols=149 Identities=19% Similarity=0.206 Sum_probs=124.5
Q ss_pred hhhCcCCCeeEEEEEeCC--CCEEEEEEeeeeccc------cchhhHHHHHHHHHHHhc-cCCCccceeeeEeecCCCCc
Q 009972 364 NIIGSSPDSLVYKGTMKG--GPEIAVISLCIKEEH------WTGYLELYFQREVADLAR-INHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~--~~~vavk~~~~~~~~------~~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||.||+|..+. ++.+|+|.+...... .......++.+|+.++.+ ++||||+++++++...+ .
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~--~ 83 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEND--R 83 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCC--e
Confidence 689999999999999875 678999987543211 112234567789988875 79999999999998877 8
Q ss_pred eEEEEeeCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeeeCCCch
Q 009972 435 RMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 435 ~~lv~ey~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~~~kl~DfGl 511 (521)
.+++|||+++++|.+++.. .....+++..+.+++.|++.||.|||+ . +++|+||||+||++++++.+||+|||+
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 84 LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999998853 223458999999999999999999996 5 899999999999999999999999999
Q ss_pred hhhccc
Q 009972 512 SFLLVS 517 (521)
Q Consensus 512 a~~~~~ 517 (521)
++....
T Consensus 161 ~~~~~~ 166 (269)
T cd08528 161 AKQKQP 166 (269)
T ss_pred eeeccc
Confidence 986543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=181.18 Aligned_cols=145 Identities=21% Similarity=0.290 Sum_probs=128.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|.+|.||+++.. +++.+++|.+...... ....+.+.+|++++.+++|||++++++++.+.+ ..+++|||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 81 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD--SLYIILEYA 81 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC--EEEEEEecC
Confidence 68999999999999886 6789999998544321 234567999999999999999999999998776 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++... ..+++..+..++.+++.|+.|||+. +++||||||+||++++++.+||+|||+++....
T Consensus 82 ~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 151 (254)
T cd06627 82 ENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLND 151 (254)
T ss_pred CCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence 999999998644 3589999999999999999999999 999999999999999999999999999886543
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-20 Score=188.25 Aligned_cols=146 Identities=21% Similarity=0.300 Sum_probs=122.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC------CceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP------FTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------~~~~ 436 (521)
+.||+|+||.||+|+.. +++.||+|.+...... ......+.+|+.++++++||||++++++|...+. ...+
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 95 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFY 95 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc--CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEE
Confidence 78999999999999986 6889999988543221 1223456789999999999999999999875431 1459
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++ +|.+++.... ..+++.+...++.|++.||+|||+. +++|+||||+||++++++.+||+|||+++.+.
T Consensus 96 lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 96 LVFEFCEH-DLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred EEEcCCCc-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 99999975 8888886432 3589999999999999999999999 99999999999999999999999999997653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-21 Score=183.14 Aligned_cols=143 Identities=21% Similarity=0.132 Sum_probs=124.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+++|+|.||+|..++-+ +++.+|+|++++ .........+.-..|-++|+..+||.+..|--.+...+ ..+.||||+
T Consensus 174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkK-eviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d--rlCFVMeya 250 (516)
T KOG0690|consen 174 KVLGKGTFGKVILCREKATGKLYAIKILKK-EVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD--RLCFVMEYA 250 (516)
T ss_pred HHhcCCccceEEEEeecccCceeehhhhhh-hheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc--eEEEEEEEc
Confidence 89999999999999987 789999998843 23333445566788999999999999998877676666 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
.+|.|+-+|.+. +.+++....-+...|..||.|||++ +||+||+|.+|.|+|.||++||+|||++|-
T Consensus 251 nGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 251 NGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKE 317 (516)
T ss_pred cCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchh
Confidence 999999888643 3588888888999999999999999 999999999999999999999999999984
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.6e-23 Score=186.10 Aligned_cols=146 Identities=25% Similarity=0.366 Sum_probs=122.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC------CCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~~~ 436 (521)
.+||+|.||.||+|+.+ +|+.||+|++-...+ .........+|+++|..++|+|++.++..|.... ....|
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmene--KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y 100 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY 100 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhcc--ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence 68999999999999997 577889887633221 1122345689999999999999999999996432 12479
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|++++++ +|...+... ...++..++.+++.++..||.|+|+. .|+|||+||.|+||+.|+..||+|||+||.+.
T Consensus 101 lVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 101 LVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred eeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 99999998 999988643 24589999999999999999999999 99999999999999999999999999998765
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-21 Score=186.90 Aligned_cols=146 Identities=23% Similarity=0.239 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+++.. ++..||+|.+.... .......+.+.+|..++.+++ ||||+++++++...+ ..++||||
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~e~ 83 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQ-LIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE--NLYFVLEY 83 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHh-ccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc--eEEEEEcC
Confidence 67999999999999986 68899999874422 112233467889999999998 999999999998776 79999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++++|.+++.... .+++..+..|+.+++.||+|||+. +++|+||||+||++++++.++++|||++..+..
T Consensus 84 ~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 84 APNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999997443 599999999999999999999998 999999999999999999999999999887643
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-21 Score=208.96 Aligned_cols=155 Identities=20% Similarity=0.132 Sum_probs=131.4
Q ss_pred HHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC
Q 009972 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 354 ~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
++.-..++|. ++||+|+||.|..++++ +++.+|+|++.+-. -........|+.|-.+|..-..+-|+.++-.|.++
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~e-MlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWE-MLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHH-HhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 3333446665 89999999999999997 68899999985421 11233456799999999999999999999999888
Q ss_pred CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCc
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfG 510 (521)
. +.|+|||||+||+|-.++..-. ++++.....++..|.-||+-+|+. |+|||||||+|||||..|++||+|||
T Consensus 148 ~--~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 148 R--YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred c--ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccch
Confidence 7 8999999999999999996444 588888889999999999999999 99999999999999999999999999
Q ss_pred hhhhcc
Q 009972 511 LSFLLV 516 (521)
Q Consensus 511 la~~~~ 516 (521)
-+--++
T Consensus 221 sClkm~ 226 (1317)
T KOG0612|consen 221 SCLKMD 226 (1317)
T ss_pred hHHhcC
Confidence 665444
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-20 Score=180.41 Aligned_cols=147 Identities=20% Similarity=0.241 Sum_probs=128.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... ++..+++|++..... .....+.+.+|+++++.++|||++++.+.+.... ..++|+||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~--~~~lv~e~~ 81 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM--SEKEREDALNEVKILKKLNHPNIIKYYESFEEKG--KLCIVMEYA 81 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccC--ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCC--EEEEEEEec
Confidence 67999999999999986 688999999854332 2234567899999999999999999999988776 899999999
Q ss_pred CCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... ...+++..+..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 9999999997532 35699999999999999999999999 999999999999999999999999999886543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.5e-21 Score=186.42 Aligned_cols=146 Identities=25% Similarity=0.290 Sum_probs=125.5
Q ss_pred hhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEe
Q 009972 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.+.||+|++|+||+|+.. +++.|++|++..+... .......+|+..+.+++ |||++++++++...+ ..++|||
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e 78 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNIVKLKEVFREND--ELYFVFE 78 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccc---hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC--cEEEEEe
Confidence 367999999999999997 5788999987543221 12334567999999999 999999999998866 8999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+ +|+|.+++.......++|.++..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++....
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRS 151 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence 99 78999998755444689999999999999999999998 999999999999999999999999999986643
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.1e-21 Score=187.23 Aligned_cols=145 Identities=15% Similarity=0.103 Sum_probs=123.6
Q ss_pred hhhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|++|.||+++.. ++..||+|.+............+.+.+|+.++.++ +||||+++.+.+.... ..++|
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv 83 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT--KLHLI 83 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC--EEEEE
Confidence 67999999999999863 56789999885322111122345688999999999 5999999999988766 78999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|||+++|+|.+++... ..+++.....++.|+++||+|||+. +++||||||+||++++++.++|+|||+++.+
T Consensus 84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 84 LDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999998643 3588999999999999999999998 9999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-20 Score=185.17 Aligned_cols=147 Identities=20% Similarity=0.252 Sum_probs=125.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. +++.+|+|++.... ........+.+|++++++++|||++++++++........++|+||+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYM 82 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccc
Confidence 57999999999999987 58899999986543 1122345688999999999999999999999876222799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++ +|.+++.... ..+++..+..++.+++.||+|||+. +++|+||||+||++++++.+||+|||+++.+..
T Consensus 83 ~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 83 DH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred cc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 85 8998886442 3689999999999999999999998 999999999999999999999999999886653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.8e-21 Score=197.83 Aligned_cols=155 Identities=15% Similarity=0.178 Sum_probs=118.1
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEe-----------------CCCCEEEEEEeeeeccccc----------hhhHHHHHHHH
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTM-----------------KGGPEIAVISLCIKEEHWT----------GYLELYFQREV 409 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~-----------------~~~~~vavk~~~~~~~~~~----------~~~~~~~~~E~ 409 (521)
.++|. ++||+|+||+||+|.. .+++.||||++........ ....+.+..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 45565 8999999999999964 2356799999854321100 01122345577
Q ss_pred HHHhccCCCcc-----ceeeeEeecCC------CCceEEEEeeCCCCChhhhhhcCC----------------------C
Q 009972 410 ADLARINHENT-----GKLLGYCRESS------PFTRMLVFDYASNGTLYEHLHYGE----------------------R 456 (521)
Q Consensus 410 ~~l~~l~H~ni-----v~l~g~~~~~~------~~~~~lv~ey~~~g~L~~~l~~~~----------------------~ 456 (521)
.++.+++|.++ +++++||.... ....+|||||+++|+|.++++... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 78888877665 67888875421 125899999999999999987321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 457 ~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
..++|..+..|+.+++.||.|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 360 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMC 360 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccc
Confidence 2357888999999999999999998 99999999999999999999999999997653
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=187.79 Aligned_cols=148 Identities=24% Similarity=0.317 Sum_probs=123.4
Q ss_pred hhhCcCCCeeEEEEEeCC---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|+... +..||+|.+...... .....+.+.+|+.++.+++||||+++++++.+.++...++|||
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 84 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ-YTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFD 84 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc-ccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEe
Confidence 679999999999999864 789999998653211 1122356788999999999999999999998874347999999
Q ss_pred eCCCCChhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC----CCCeeeCCCchhh
Q 009972 441 YASNGTLYEHLHYG---ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----DFSPKVSPLCLSF 513 (521)
Q Consensus 441 y~~~g~L~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~----~~~~kl~DfGla~ 513 (521)
|+++ ++.+++... ....+++.....|+.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 85 YAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred CCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 9986 777776422 123688999999999999999999999 9999999999999999 9999999999988
Q ss_pred hcc
Q 009972 514 LLV 516 (521)
Q Consensus 514 ~~~ 516 (521)
.+.
T Consensus 161 ~~~ 163 (316)
T cd07842 161 LFN 163 (316)
T ss_pred ccC
Confidence 754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.4e-21 Score=191.80 Aligned_cols=145 Identities=19% Similarity=0.226 Sum_probs=122.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC--CCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--PFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lv~e 440 (521)
+.||+|++|.||+|+.. ++..||+|++...... ....+.+.+|+.++.+++||||+++++++.... ....++|||
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 88 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV--PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMD 88 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEecccccc--ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEe
Confidence 68999999999999986 6889999988543221 123456788999999999999999999876432 226899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|++ |+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 89 ~~~-~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 89 LME-SDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred hhh-hhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 996 59999986433 489999999999999999999998 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.4e-21 Score=186.85 Aligned_cols=152 Identities=21% Similarity=0.231 Sum_probs=127.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccch----hhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTG----YLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
++||+|+|+.|||+.+- ..+.||||+-... ++|.. ...+...+|.++.+.+.||.||++++|+.-+.. ..+-|
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlN-K~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd-sFCTV 546 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLN-KNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD-SFCTV 546 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhc-cchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc-cceee
Confidence 68999999999999875 5677888875332 33432 234567899999999999999999999965432 68999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeeeCCCchhhhc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld---~~~~~kl~DfGla~~~ 515 (521)
+|||++.+|+-||+... .+++.....|+.||..||.||.+. .|+|||-||||.||||- .-|++||+||||+++|
T Consensus 547 LEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM 623 (775)
T KOG1151|consen 547 LEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM 623 (775)
T ss_pred eeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence 99999999999996443 489999999999999999999985 88999999999999994 3588999999999999
Q ss_pred ccccc
Q 009972 516 VSSII 520 (521)
Q Consensus 516 ~~~~~ 520 (521)
++..+
T Consensus 624 dddSy 628 (775)
T KOG1151|consen 624 DDDSY 628 (775)
T ss_pred cCCcc
Confidence 87654
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.9e-21 Score=194.61 Aligned_cols=142 Identities=20% Similarity=0.201 Sum_probs=122.9
Q ss_pred hhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 365 IIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
++|+|.||+||.|++.+ ...+|||.+..+.. ...+....||.+.+.++|.|||+++|.|..+. ..-+.||-+|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds----r~~QPLhEEIaLH~~LrHkNIVrYLGs~senG--f~kIFMEqVP 655 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS----REVQPLHEEIALHSTLRHKNIVRYLGSVSENG--FFKIFMEQVP 655 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccc----hhhccHHHHHHHHHHHhhHhHHHHhhccCCCC--eEEEEeecCC
Confidence 79999999999999975 56789998854432 23456889999999999999999999987766 7889999999
Q ss_pred CCChhhhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld-~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++.+ -.++ .+.+.--+.+||.+||.|||+. .|||||||-.|||+. -.|.+||+|||-+|.+.
T Consensus 656 GGSLSsLLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA 727 (1226)
T KOG4279|consen 656 GGSLSSLLRSK-WGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA 727 (1226)
T ss_pred CCcHHHHHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhc
Confidence 99999999743 2355 7788889999999999999999 999999999999996 57999999999988753
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.7e-21 Score=202.52 Aligned_cols=151 Identities=13% Similarity=0.172 Sum_probs=115.0
Q ss_pred hhhh--hhhCcCCCeeEEEEEeCC--CCEEEEEEe-------------eeeccccchhhHHHHHHHHHHHhccCCCccce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMKG--GPEIAVISL-------------CIKEEHWTGYLELYFQREVADLARINHENTGK 422 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~~--~~~vavk~~-------------~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 422 (521)
++|. +.||+|+||+||+|..+. +...+.|.+ ..+...........+.+|+.++++++|||||+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 4454 789999999999997753 222222211 01111111223456889999999999999999
Q ss_pred eeeEeecCCCCceEEEEeeCCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 009972 423 LLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 423 l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld 499 (521)
+++++...+ ..++|+|++.. +|.+++.... .......+...|+.|++.||+|||+. +|+||||||+|||++
T Consensus 228 l~~~~~~~~--~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 228 IEEILRSEA--NTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred EeEEEEECC--eeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999998877 78999999964 7888775321 11233556778999999999999998 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009972 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++.+.
T Consensus 302 ~~~~vkL~DFGla~~~~ 318 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFE 318 (501)
T ss_pred CCCCEEEEeCCCceecC
Confidence 99999999999998764
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-20 Score=186.43 Aligned_cols=143 Identities=15% Similarity=0.077 Sum_probs=119.5
Q ss_pred hhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCC
Q 009972 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
.+|.|+++.||+++. +++.||+|++.... ......+.+.+|+++++.++|+||+++++++...+ ..+++|||+++
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~--~~~~~~e~~~~ 83 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDS--CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS--ELYVVSPLMAY 83 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccc--cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC--eEEEEEeccCC
Confidence 344455555555544 68899999985432 12234567999999999999999999999998877 78999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 445 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|+|.+++.......+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||.+..+
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 84 GSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSM 151 (314)
T ss_pred CCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceee
Confidence 9999999754444689999999999999999999999 9999999999999999999999999988654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-20 Score=179.53 Aligned_cols=147 Identities=21% Similarity=0.236 Sum_probs=128.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|..+ +++.|++|.+...... ....+.+.+|+.++++++||||+++++.+........++++||+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 83 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS--EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV 83 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccc--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence 67999999999999997 6889999988544321 23456789999999999999999999999876212789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... .++|..+..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||.+.....
T Consensus 84 ~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 84 SGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 9999999997443 689999999999999999999998 999999999999999999999999999887654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-20 Score=189.56 Aligned_cols=144 Identities=21% Similarity=0.217 Sum_probs=121.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----CceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||.||++... ++..||+|++.... ........+.+|+.++++++||||+++++++..... ...++|
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 98 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLV 98 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEE
Confidence 68999999999999875 78899999874321 122334568899999999999999999999875431 135899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 99 ~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 99 MPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred EecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 9999 6699888753 2489999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-20 Score=188.34 Aligned_cols=145 Identities=20% Similarity=0.172 Sum_probs=123.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccch----------hhHHHHHHHHHHHhccCCCccceeeeEeecCCC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTG----------YLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
+.||+|+||+||+|+.. +++.||+|.+......... .....+.+|++++..++||||+++++++...+
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 93 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD- 93 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC-
Confidence 67999999999999986 6889999988543211100 01124789999999999999999999998776
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
..++||||++ |+|.+++.... .+++.....++.|++.||+|||+. +++||||||+||++++++.+||+|||++
T Consensus 94 -~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 94 -FINLVMDIMA-SDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred -cEEEEEeccc-cCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCccce
Confidence 8999999997 59999986433 489999999999999999999998 9999999999999999999999999998
Q ss_pred hhcc
Q 009972 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+.+.
T Consensus 167 ~~~~ 170 (335)
T PTZ00024 167 RRYG 170 (335)
T ss_pred eecc
Confidence 8655
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-20 Score=180.85 Aligned_cols=147 Identities=21% Similarity=0.210 Sum_probs=127.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.+++|.+..... ......++.+|++++++++|+||+++.+++.... ..++||||+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 81 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM--SQKEREDAVNEIRILASVNHPNIISYKEAFLDGN--KLCIVMEYA 81 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhc--cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC--EEEEEehhc
Confidence 68999999999999876 678899998854321 1233557889999999999999999999988776 899999999
Q ss_pred CCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++... ....+++..+..++.++++||+|||+. +++|+||+|+||++++++.+||+|||+++....
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 999999998642 234589999999999999999999999 999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=182.91 Aligned_cols=144 Identities=17% Similarity=0.167 Sum_probs=120.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. ++..+|+|++...... .......+|+.++.++. |+|++++++++.+......++|+||
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS---LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCC---chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence 67999999999999986 6889999987543221 12223457898999885 9999999999987632378999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++ |++.+++.... ..++|.++..++.|++.||+|||+. +++||||||+||++++ +.+||+|||+++.+.
T Consensus 82 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 82 MD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred CC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 97 58888886433 3589999999999999999999999 9999999999999999 999999999998654
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-20 Score=189.02 Aligned_cols=156 Identities=21% Similarity=0.176 Sum_probs=126.8
Q ss_pred HHHHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEee
Q 009972 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428 (521)
Q Consensus 352 ~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 428 (521)
..++...+++|. +.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.++.+++||||+++++++.
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch--hhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 345555667776 78999999999999875 688999998843221 1223456889999999999999999999886
Q ss_pred cCC----CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCe
Q 009972 429 ESS----PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 429 ~~~----~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~ 504 (521)
... ....++++|++ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCE
Confidence 432 11467888877 67998887532 489999999999999999999999 99999999999999999999
Q ss_pred eeCCCchhhhcc
Q 009972 505 KVSPLCLSFLLV 516 (521)
Q Consensus 505 kl~DfGla~~~~ 516 (521)
||+|||+++...
T Consensus 160 kl~dfg~~~~~~ 171 (345)
T cd07877 160 KILDFGLARHTD 171 (345)
T ss_pred EEeccccccccc
Confidence 999999988654
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.5e-20 Score=177.32 Aligned_cols=144 Identities=22% Similarity=0.302 Sum_probs=127.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... ++..+++|++..... ...+.+.+|++++++++|+|++++++++...+ ..++++||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~l~~e~~ 79 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKD--ELWIVMEFC 79 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEecC
Confidence 67999999999999997 688899998854322 23467899999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... ..+++..+..++.+++.||+|||+. +++||||+|+||++++++.++|+|||.+.....
T Consensus 80 ~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 150 (253)
T cd05122 80 SGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSD 150 (253)
T ss_pred CCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccc
Confidence 9999999987442 3589999999999999999999998 999999999999999999999999999887654
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-20 Score=182.50 Aligned_cols=147 Identities=21% Similarity=0.279 Sum_probs=122.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCccceeeeEeecCCC---CceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRESSP---FTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~---~~~~ 436 (521)
+.||+|+||.||+|+.+ +++.+|+|++..+... ......+.+|+.++.++ +|||++++++++...+. ...+
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 82 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE--EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLT 82 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEecccccc--chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeE
Confidence 67999999999999997 4899999998544321 12234567788777665 69999999999987651 1289
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|||+++ +|.+++.......++|..+..++.++++||+|||+. +++|+||+|+||++++++.+||+|||+++.+.
T Consensus 83 l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 83 LVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred EEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 99999975 899988754444689999999999999999999998 99999999999999999999999999987764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-20 Score=198.33 Aligned_cols=148 Identities=13% Similarity=0.119 Sum_probs=115.8
Q ss_pred HHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC------Cccceeee
Q 009972 355 LEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH------ENTGKLLG 425 (521)
Q Consensus 355 l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~g 425 (521)
+...+.+|. ++||+|+||+||+|+.. +++.||||++.... .....+..|+.++.+++| .+++++++
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 333445565 78999999999999986 57889999984321 122345567776666654 45889999
Q ss_pred EeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCC--
Q 009972 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDF-- 502 (521)
Q Consensus 426 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~-- 502 (521)
++..... ..++|||++ +++|.+++... ..+++..+..|+.||+.||+|||+ . +||||||||+|||++.++
T Consensus 199 ~~~~~~~-~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 199 YFQNETG-HMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEEcCCc-eEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcc
Confidence 8876532 688999988 56899988644 358999999999999999999997 5 899999999999998765
Q ss_pred --------------CeeeCCCchhhh
Q 009972 503 --------------SPKVSPLCLSFL 514 (521)
Q Consensus 503 --------------~~kl~DfGla~~ 514 (521)
.+||+|||++..
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~ 297 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCD 297 (467)
T ss_pred cccccccccCCCCceEEECCCCcccc
Confidence 499999998764
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-20 Score=188.98 Aligned_cols=143 Identities=24% Similarity=0.280 Sum_probs=120.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC---CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. +|+.||+|.+..... ......+.+|+.++.+++||||+++++++.... ....++|+
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 87 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH---QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQ 87 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEe
Confidence 78999999999999886 688999998843211 123456888999999999999999999876432 11479999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++ +|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 88 e~~~~-~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 88 ELMET-DLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred hhccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 99975 88887753 2489999999999999999999999 99999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-20 Score=178.28 Aligned_cols=144 Identities=26% Similarity=0.199 Sum_probs=125.0
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCC
Q 009972 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||.||++... +++.+++|.+.... .........+.+|+.++++++||||+++++.+.... ..++||||+++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~~~ 77 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKK-IIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE--KLYLVLEYAPG 77 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhh-hcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC--eeEEEEecCCC
Confidence 689999999999987 58899999875432 112224457899999999999999999999998776 89999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 445 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|.+++.... .+++.....++.++++|+.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 78 ~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~ 145 (250)
T cd05123 78 GELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSS 145 (250)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence 99999996443 489999999999999999999998 999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-20 Score=188.25 Aligned_cols=148 Identities=18% Similarity=0.216 Sum_probs=122.9
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---- 432 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 432 (521)
+.|. +.||+|+||.||+|+.. +++.||+|.+..... .......+.+|+.++.+++||||+++++++.....
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ--NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc--ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4454 78999999999999986 788999998743221 12233567889999999999999999998864321
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
...++||||+++ +|.+.+... +++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 246999999975 888887532 78999999999999999999999 9999999999999999999999999999
Q ss_pred hhccc
Q 009972 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+....
T Consensus 166 ~~~~~ 170 (353)
T cd07850 166 RTAGT 170 (353)
T ss_pred eeCCC
Confidence 87643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.1e-20 Score=178.60 Aligned_cols=135 Identities=16% Similarity=0.096 Sum_probs=112.7
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+|+|+||.||+++.+ ++..+|+|.+..+... .. |+.....+ +|||++++++++...+ ..++||||++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-------~~--e~~~~~~~~~h~~iv~~~~~~~~~~--~~~iv~e~~~ 92 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-------AI--EPMVHQLMKDNPNFIKLYYSVTTLK--GHVLIMDYIK 92 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-------hh--hHHHHHHhhcCCCEEEEEEEEecCC--eeEEEEEcCC
Confidence 599999999999986 6788888887433211 01 22222212 7999999999998877 8999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-~~kl~DfGla~~~~ 516 (521)
+|+|.+++.... .++|.++..++.|+++||.|||+. +++||||||+||+++.++ .++|+|||+++.+.
T Consensus 93 ~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 93 DGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 999999997543 689999999999999999999999 999999999999999988 99999999987654
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.9e-20 Score=183.03 Aligned_cols=144 Identities=22% Similarity=0.236 Sum_probs=123.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. ++..|++|.+...... .....+.+.+|++++++++|||++++++++.+.+ ..++||||+
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 103 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ-TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH--TAWLVMEYC 103 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEEecC
Confidence 57999999999999986 6889999988543221 2223456889999999999999999999998877 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
. |++.+++... ..+++|.++..++.+++.|++|||+. +++||||||+||++++++.+||+|||++...
T Consensus 104 ~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~ 171 (313)
T cd06633 104 L-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKS 171 (313)
T ss_pred C-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence 6 5888887533 23589999999999999999999998 9999999999999999999999999987643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-21 Score=195.74 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=120.7
Q ss_pred hhhCcCCCeeEEEEEeCCCC-EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~-~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||.|+||+||+++.++.. ..|.|.+..+. .....+|.-||++|+.++||+||+|++.|+..+ ..+++.|||
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetks----eEELEDylVEIeILa~CdHP~ivkLl~ayy~en--kLwiliEFC 111 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKS----EEELEDYLVEIEILAECDHPVIVKLLSAYYFEN--KLWILIEFC 111 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccc----hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC--ceEEEEeec
Confidence 45889999999999998544 44556664333 345568999999999999999999999887766 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
.+|..+..+-+-+ .+|++.++.-++.+++.||.|||+. .|||||||+.|||++-||.++|+|||.+.
T Consensus 112 ~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 112 GGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred CCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccc
Confidence 9999998876433 4799999999999999999999999 99999999999999999999999999754
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-20 Score=186.55 Aligned_cols=152 Identities=19% Similarity=0.184 Sum_probs=125.8
Q ss_pred HHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC
Q 009972 355 LEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431 (521)
Q Consensus 355 l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 431 (521)
+...+++|. +.||+|+||.||++... +++.||+|++..... .....+.+.+|++++..++||||+++.+++....
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 82 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS--TPVLAKRTYRELKLLKHLRHENIISLSDIFISPL 82 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC
Confidence 334556665 78999999999999876 788999998743221 1223456889999999999999999999886533
Q ss_pred CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCch
Q 009972 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 432 ~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGl 511 (521)
. ..++|+||+. ++|.++++.. .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 83 ~-~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~ 154 (328)
T cd07856 83 E-DIYFVTELLG-TDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGL 154 (328)
T ss_pred C-cEEEEeehhc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccc
Confidence 2 6889999995 5898888532 478888899999999999999999 999999999999999999999999999
Q ss_pred hhhcc
Q 009972 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
++...
T Consensus 155 ~~~~~ 159 (328)
T cd07856 155 ARIQD 159 (328)
T ss_pred ccccC
Confidence 88654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.2e-20 Score=182.42 Aligned_cols=145 Identities=19% Similarity=0.226 Sum_probs=123.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..+|+|.+...... .....+++.+|+++++.++|+|++++.+++.... ..++||||+
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 97 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYC 97 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--eeEEEEEcc
Confidence 67999999999999986 5788999987532211 1223456889999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
. |++.+++.... .++++.++..++.+++.||.|||+. +++||||||+||++++++.+||+|||++..+.
T Consensus 98 ~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 98 L-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred C-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 7 58888775332 3589999999999999999999998 99999999999999999999999999988654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-20 Score=187.32 Aligned_cols=143 Identities=22% Similarity=0.234 Sum_probs=119.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----CceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||+|++..... .......+.+|+.++++++||||+++++++..... ...++|
T Consensus 21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 98 (342)
T cd07879 21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ--SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLV 98 (342)
T ss_pred EEeeecCCeEEEEEEeCCCCcEEEEEEecCccc--cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEE
Confidence 78999999999999985 689999998853321 12234568899999999999999999999865431 146899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||+.. +|..+.. ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 99 ~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 99 MPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred eccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 999975 7777652 2489999999999999999999999 99999999999999999999999999998643
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.2e-20 Score=182.29 Aligned_cols=144 Identities=19% Similarity=0.176 Sum_probs=119.9
Q ss_pred hhhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.++ ++.||||.+..... .....++.+|+.++.+.. ||||++++++|.+.. ..+++|||
T Consensus 21 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~e~ 95 (296)
T cd06618 21 GEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN---KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS--DVFICMEL 95 (296)
T ss_pred eEeeccCCeEEEEEEECCCCeEEEEEEEeccCC---hHHHHHHHHHHHHHHhccCCCchHhhheeeecCC--eEEEEeec
Confidence 789999999999999974 88999999853321 123445677887777774 999999999998877 79999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++ ++.+++.... ..+++..+..++.+++.||+|||+. ++|+||||+|+||++++++.+||+|||+++.+.
T Consensus 96 ~~~-~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 96 MST-CLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred cCc-CHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 865 7777765322 3689999999999999999999973 189999999999999999999999999988654
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-20 Score=183.91 Aligned_cols=146 Identities=16% Similarity=0.229 Sum_probs=121.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC------CceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP------FTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------~~~~ 436 (521)
+.||+|+||.||+|+.. +++.+|+|++..+... ......+.+|++++++++||||+++++++..... ...+
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVY 91 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC--CCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEE
Confidence 78999999999999986 6889999988554321 1123457889999999999999999998754331 1469
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+||++. ++.+.+... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 92 lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 92 MVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred EEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 99999986 787777533 23589999999999999999999999 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-20 Score=181.22 Aligned_cols=144 Identities=23% Similarity=0.278 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|.+|.||+|+.. +++.+|+|.+..... .....+.+.+|+.++++++|+|++++++++.+.+ ..++||||+
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~v~e~~ 80 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE--EEGIPSTALREISLLKELKHPNIVKLLDVIHTER--KLYLVFEYC 80 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccc--cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC--ceEEEecCc
Confidence 67999999999999997 588999999865431 1223456789999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ ++|.+++.... ..+++..+..++.+++.||+|||+. +|+||||+|+||++++++.+||+|||+++...
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~ 149 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFG 149 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccC
Confidence 8 59999997542 3589999999999999999999999 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.7e-20 Score=185.59 Aligned_cols=145 Identities=17% Similarity=0.192 Sum_probs=122.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC---CceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~ 439 (521)
+.||+|+||+||+|+.. ++..||+|.+...... ......+.+|+.++..++|+||+++++++..... ...++||
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 88 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN--RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVY 88 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEecccccc--cchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEE
Confidence 68999999999999986 6889999987533211 2223467789999999999999999998865421 1479999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 89 e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 89 ELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred eCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 9997 6899888643 3589999999999999999999999 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=182.94 Aligned_cols=145 Identities=16% Similarity=0.133 Sum_probs=119.4
Q ss_pred hhhCcCCCeeEEEEEeC-C--CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecC--CCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK-G--GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES--SPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~--~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~~~l 437 (521)
+.||+|+||.||+++.. + +..||+|++..... .....+.+.+|++++.++ .||||+++++++... .....++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 83 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFS--KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYL 83 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccc--cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEE
Confidence 67999999999999986 3 67899998743211 122345688999999999 599999999976432 1125788
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++||++ ++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 84 ~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 84 YEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred EEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 889987 5999998643 3589999999999999999999999 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.4e-21 Score=175.23 Aligned_cols=158 Identities=17% Similarity=0.138 Sum_probs=129.2
Q ss_pred cccCHHHHHHHHhhhhhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeee
Q 009972 348 VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLG 425 (521)
Q Consensus 348 ~~~~~~~l~~~~~~f~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g 425 (521)
..|+.++++.. ..||.|.||+|+|-.++ .|+..|||++..... ..+.+++..|.+...+- +.||||+++|
T Consensus 59 ~~F~~~~Lqdl-----g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~---~keq~rll~e~d~~mks~~cp~IVkfyG 130 (361)
T KOG1006|consen 59 HTFTSDNLQDL-----GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI---EKEQKRLLMEHDTVMKSSNCPNIVKFYG 130 (361)
T ss_pred cccccchHHHH-----HHhcCCcchhhhhhhcCccCcEEEEEEeeeccc---hHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence 45666666654 47999999999999886 789999999854432 34567899999876655 7899999999
Q ss_pred EeecCCCCceEEEEeeCCCCChhhhhh---cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 009972 426 YCRESSPFTRMLVFDYASNGTLYEHLH---YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 426 ~~~~~~~~~~~lv~ey~~~g~L~~~l~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~ 502 (521)
.+..+. ..++-||.|.- +++.+.+ ..+...+++...-+|+..+..||.||-.. ..|||||+||+|||+|..|
T Consensus 131 a~F~EG--dcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G 205 (361)
T KOG1006|consen 131 ALFSEG--DCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHG 205 (361)
T ss_pred hhhcCC--ceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCC
Confidence 988766 79999999976 7766543 22334588888899999999999999876 3899999999999999999
Q ss_pred CeeeCCCchhhhcccc
Q 009972 503 SPKVSPLCLSFLLVSS 518 (521)
Q Consensus 503 ~~kl~DfGla~~~~~~ 518 (521)
.+||||||++-.+.++
T Consensus 206 ~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 206 DVKLCDFGICGQLVDS 221 (361)
T ss_pred CEeeecccchHhHHHH
Confidence 9999999998776653
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.3e-20 Score=179.60 Aligned_cols=145 Identities=21% Similarity=0.277 Sum_probs=125.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|... +++.+++|.+...... ......+.+|+.++++++|+||+++++++.... ..++|+||+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 80 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES--EGIPKTALREIKLLKELNHPNIIKLLDVFRHKG--DLYLVFEFM 80 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEecccccc--chhHHHHHHHHHHHHHhcCCCcchHHHhhccCC--CEEEEEecc
Confidence 57999999999999986 6888999987543321 233457889999999999999999999998776 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++ ++.+++.... ..+++.++..++.+++.||+|||+. +++|+||||+||++++++.+||+|||.+..+..
T Consensus 81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~ 150 (283)
T cd05118 81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGS 150 (283)
T ss_pred CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCC
Confidence 85 8988886433 4689999999999999999999999 999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-20 Score=163.76 Aligned_cols=147 Identities=16% Similarity=0.165 Sum_probs=123.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
..||+|+||.|-+-++. +|...|+|++...-. .+..++..+|+.+..+. ..|.+|+++|.+.... ..++.||.
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn---~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg--dvwIcME~ 126 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN---SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG--DVWICMEL 126 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcC---hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc--cEEEeHHH
Confidence 56999999999888885 799999999855432 34566788899876554 8999999999887765 78999999
Q ss_pred CCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 442 ASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 442 ~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
|.- +|..+.++ ..+...++.-.-+||..|..||.|||++. .++|||+||+|||++.+|.+|+||||++-.+.++
T Consensus 127 M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 127 MDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred hhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 976 88777652 23446899999999999999999999874 8999999999999999999999999998877654
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.3e-20 Score=177.53 Aligned_cols=147 Identities=17% Similarity=0.160 Sum_probs=119.3
Q ss_pred hhhCcCCCeeEEEEEeCC-CCEEEEEEeeeec-cccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~-~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+++... +..+++|.+..-. .........++.+|+.++++++||||+++++++.+.. ..++||||
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD--AFCIITEY 83 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC--ceEEEEEe
Confidence 689999999999998863 4445555542211 1112223445778999999999999999999998776 78999999
Q ss_pred CCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++++|.++++. .....+++.++..++.+++.||.|||+. +++|+||||+||++++ +.+||+|||+++.+.
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 84 CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred CCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999998863 2334689999999999999999999998 9999999999999975 569999999987653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-19 Score=173.75 Aligned_cols=132 Identities=15% Similarity=0.082 Sum_probs=113.6
Q ss_pred CCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCCCCh
Q 009972 369 SPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447 (521)
Q Consensus 369 G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L 447 (521)
|.+|.||+++.. +++.+|+|++.... .+.+|...+....||||+++++++...+ ..++||||+++|+|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~~~~~~L 72 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---------EYSRERLTIIPHCVPNMVCLHKYIVSED--SVFLVLQHAEGGKL 72 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---------hhhhHHHHHHhcCCCceeehhhheecCC--eEEEEEecCCCCCH
Confidence 889999999996 68899999984322 2344555555667999999999998776 79999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 448 YEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 448 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
.+++.... .+++..+..++.+++.||+|||+. +++||||||+||++++++.++++|||.++.+.
T Consensus 73 ~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~ 136 (237)
T cd05576 73 WSHISKFL--NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE 136 (237)
T ss_pred HHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccc
Confidence 99986433 489999999999999999999998 99999999999999999999999999876554
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.1e-20 Score=191.08 Aligned_cols=147 Identities=22% Similarity=0.247 Sum_probs=128.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecC---CCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES---SPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~---~~~~~~lv 438 (521)
++||+|.+|.||+++.. +++..|+|+..... ...++...|.++++.. .|||++.++|++... .+++.+||
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLV 99 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLV 99 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCc-----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEE
Confidence 89999999999999986 68888998874432 2345677888888877 799999999998632 24589999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
||||.+|+.-|+++...+..+.|..+..|.+++++|+.+||.. .++|||+|-.|||+++++.+|+.|||++..++++
T Consensus 100 MEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT 176 (953)
T KOG0587|consen 100 MEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST 176 (953)
T ss_pred eeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence 9999999999999865566799999999999999999999999 9999999999999999999999999999887764
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=182.76 Aligned_cols=146 Identities=21% Similarity=0.215 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC---CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|++|.||+|+.. +++.+|+|++..... .....+.+.+|+.+++.++|+||+++.+++.... ....++||
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~ 83 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD--DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVT 83 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccc--cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEe
Confidence 68999999999999986 588999998854321 1234467899999999999999999999987652 12579999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++ +|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||++++++.++|+|||+++....
T Consensus 84 e~~~~-~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 84 ELMET-DLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred cchhh-hHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 99985 8999886433 689999999999999999999999 999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.4e-20 Score=184.44 Aligned_cols=144 Identities=23% Similarity=0.218 Sum_probs=121.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----CceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
..||+|++|.||+|+.. ++..||+|++..... .....+.+.+|+.++++++|||++++++++...+. ...++|
T Consensus 21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 98 (343)
T cd07851 21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ--SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLV 98 (343)
T ss_pred EEeccCCceEEEEEEECCCCcEEEEEecccccc--hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEE
Confidence 78999999999999997 578999998743211 12233567889999999999999999998765441 138999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||+ +++|.+++.. ..+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 99 ~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 99 THLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred EecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 9999 4599998863 2489999999999999999999998 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=195.86 Aligned_cols=146 Identities=22% Similarity=0.292 Sum_probs=125.8
Q ss_pred hhhhhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCC
Q 009972 362 FSNIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 432 (521)
+.+.+|+|.||.|++|.... ...||||.+..... ....+.+..|+++|..+ +|+||+.++|+|....
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~---~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~- 375 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS---SSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG- 375 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccC---cHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC-
Confidence 34689999999999998641 34689998743322 24567899999999999 7999999999999855
Q ss_pred CceEEEEeeCCCCChhhhhhcCC------C--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGE------R--------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~------~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl 498 (521)
..++|.||+++|+|.++++... . ..++..+.+.++.|||.||+||++. ++|||||.++|||+
T Consensus 376 -~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 376 -PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLI 451 (609)
T ss_pred -ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEe
Confidence 7899999999999999998543 0 2388999999999999999999999 99999999999999
Q ss_pred cCCCCeeeCCCchhhhc
Q 009972 499 TEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 499 d~~~~~kl~DfGla~~~ 515 (521)
.++..+||+|||+||..
T Consensus 452 ~~~~~~kIaDFGlar~~ 468 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDH 468 (609)
T ss_pred cCCCEEEEccccceecc
Confidence 99999999999999953
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-20 Score=166.47 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=120.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.+|+|.|++||.|..- +.+.++||.++.- ..+.+.+|+.+|..++ ||||++|++...++......||+||
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~ 116 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPV-------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEY 116 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechH-------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhh
Confidence 68999999999999864 5677888887432 2356899999999997 9999999999988765578899999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeeeCCCchhhhcccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-~~~~kl~DfGla~~~~~~ 518 (521)
+.+-+...+.. .|+..++..++.++..||.|+|+. ||+|||+||.|++||. .-..+|.|+|+|.++.+.
T Consensus 117 v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 117 VNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred hccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 99987776653 377888999999999999999999 9999999999999995 467999999999998764
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-19 Score=180.73 Aligned_cols=142 Identities=21% Similarity=0.322 Sum_probs=119.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----------
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---------- 432 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---------- 432 (521)
+.||+|+||.||+|... ++..||+|++..+.. ...+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (342)
T cd07854 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLT 86 (342)
T ss_pred EEecCCCCEEEEEEEECCCCcEEEEEEEecCCC----chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccccc
Confidence 78999999999999986 688999998854432 234568899999999999999999987765321
Q ss_pred --CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeeeCCC
Q 009972 433 --FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPL 509 (521)
Q Consensus 433 --~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld-~~~~~kl~Df 509 (521)
...++||||++ ++|.+++... .+++.....++.|++.||.|||+. +++||||||+||+++ +++.+|++||
T Consensus 87 ~~~~~~lv~e~~~-~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 87 ELNSVYIVQEYME-TDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccceEEEEeeccc-ccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCc
Confidence 14689999998 5998888532 488999999999999999999998 999999999999998 4567899999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 160 g~~~~~~ 166 (342)
T cd07854 160 GLARIVD 166 (342)
T ss_pred ccceecC
Confidence 9997653
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.3e-20 Score=199.86 Aligned_cols=146 Identities=18% Similarity=0.210 Sum_probs=124.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||.|.||.||-|... +|.-.|+|-+...... ...-..+.+|+.++..++|||+|+++|+-...+ ..+|.||||
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe--kv~IFMEyC 1316 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE--KVYIFMEYC 1316 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCceeecHH--HHHHHHHHh
Confidence 68999999999999886 6888899877443222 233456889999999999999999999988777 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
++|+|.+.+.... ..++.-...+..|++.|++|||+. +||||||||.||+||.+|.+|.+|||.|.-+.+.
T Consensus 1317 ~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred ccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 9999999996432 356666777889999999999999 9999999999999999999999999999876543
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-19 Score=181.66 Aligned_cols=147 Identities=17% Similarity=0.201 Sum_probs=122.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeec---cccchh-hHHHHHHHHHHHhccC---CCccceeeeEeecCCCCce
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKE---EHWTGY-LELYFQREVADLARIN---HENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~---~~~~~~-~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~ 435 (521)
..+|+|+||.|+.|.++ +..+|++|.+.+.+ +.|-+. ....+-.||.+|+.++ |+||++++.++++++ +.
T Consensus 567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd--~y 644 (772)
T KOG1152|consen 567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD--YY 644 (772)
T ss_pred eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC--ee
Confidence 68999999999999997 45688888875433 112111 0112556999999997 999999999999988 89
Q ss_pred EEEEeeC-CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 436 MLVFDYA-SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 436 ~lv~ey~-~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
||+||-. ++-+|+++|..+. .+++....-|.+||+.|+++||+. +|||||||-+||.+|.+|.+||.|||-|..
T Consensus 645 yl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 645 YLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred EEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccchhh
Confidence 9999975 4559999996444 489999999999999999999999 999999999999999999999999999876
Q ss_pred ccc
Q 009972 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
..+
T Consensus 720 ~ks 722 (772)
T KOG1152|consen 720 TKS 722 (772)
T ss_pred hcC
Confidence 554
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-19 Score=182.02 Aligned_cols=144 Identities=14% Similarity=0.069 Sum_probs=122.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+-||-|+||+|..++-- +...+|+|.+.+++.. .+.....+..|-.||+..+.+-||+|+--|.+.+ ..|.||||+
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl-~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd--nLYFVMdYI 711 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVL-MRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD--NLYFVMDYI 711 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHH-hhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC--ceEEEEecc
Confidence 46899999999998654 4567899988655422 1223456788999999999999999999888877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|++..+|-+.+ .+++.....++.++..|+++.|.. |+|||||||+|||||.||++||+||||+.-+
T Consensus 712 PGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 712 PGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 779 (1034)
T ss_pred CCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccc
Confidence 9999999986444 477887788888999999999999 9999999999999999999999999998643
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-19 Score=178.49 Aligned_cols=145 Identities=16% Similarity=0.136 Sum_probs=127.4
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+.+.||++...+.+.+|+|++... ..+......|.+|+..|.++ .|.+||+|++|-..++ ..||||||-
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~~--~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~--~lYmvmE~G 442 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVVLL--EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG--YLYMVMECG 442 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHHHh--hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc--eEEEEeecc
Confidence 679999999999999988889999987543 33456677899999999999 6999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~~ 518 (521)
+. +|..+|+.+.....+| .+..+..|+.+++.++|.+ +|||.||||.|+|+ -+|.+||+|||+|+.+.+.
T Consensus 443 d~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 443 DI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPD 512 (677)
T ss_pred cc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeeeechhcccCcc
Confidence 87 9999998666555567 6778999999999999999 99999999999998 4589999999999987654
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.4e-19 Score=163.72 Aligned_cols=137 Identities=13% Similarity=0.147 Sum_probs=104.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-----CCCccceeeeEeecCCC-Cc-eE
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-----NHENTGKLLGYCRESSP-FT-RM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~g~~~~~~~-~~-~~ 436 (521)
+.||+|+||.||+ ++.....+||++..... ...+.+.+|+.++..+ .||||++++|++.++.+ .. ..
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~----~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD----GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred ceecCCCceEEEE--CCCCcCeEEEEEecccc----chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 6899999999996 54333347888744321 1345789999999999 57999999999988642 12 33
Q ss_pred EEEee--CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCCCeeecCCCCCCeeecC----CCCeeeCC-
Q 009972 437 LVFDY--ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGL-KYLHTELGPPFTISELNSSAVYLTE----DFSPKVSP- 508 (521)
Q Consensus 437 lv~ey--~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivH~dlk~~NILld~----~~~~kl~D- 508 (521)
+|+|| +++|+|.+++... .+++. ..++.++..++ +|||+. +|+||||||+|||++. +..++|+|
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 78999 6689999999642 25555 35678888777 999999 9999999999999974 34899999
Q ss_pred Cchhhh
Q 009972 509 LCLSFL 514 (521)
Q Consensus 509 fGla~~ 514 (521)
||...+
T Consensus 154 ~G~~~~ 159 (210)
T PRK10345 154 IGESTF 159 (210)
T ss_pred CCCcce
Confidence 555444
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-20 Score=171.46 Aligned_cols=145 Identities=19% Similarity=0.174 Sum_probs=121.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCC---ceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~lv~ 439 (521)
+-||-|+||.||.+.++ +|+.||.|++..- ...-...+.+.+|++++..++|.|++..+++..-.+.+ +.|+++
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnv--fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNV--FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchH--HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 57999999999999986 8999999987322 11223446789999999999999999999887654422 578999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|.|.. +|...+-. .++++-....-+..||.+||.|||+. +|.||||||.|.|++.+-..||+|||+||.-+
T Consensus 137 ELmQS-DLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 137 ELMQS-DLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHh-hhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 99987 88888753 34588888888999999999999999 99999999999999999999999999999754
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.1e-19 Score=173.33 Aligned_cols=146 Identities=10% Similarity=0.091 Sum_probs=106.0
Q ss_pred hhhCcCCCeeEEEEEeCCC----CEEEEEEeeeeccccchh-------hHHHHHHHHHHHhccCCCccceeeeEeecCCC
Q 009972 364 NIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGY-------LELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
++||+|+||+||+|...++ ..+|+|............ .......+...+..++|+|++++++++.....
T Consensus 18 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~ 97 (294)
T PHA02882 18 KLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRC 97 (294)
T ss_pred eEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecC
Confidence 7899999999999998643 455555432222111000 01123344455667899999999997654331
Q ss_pred --CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCc
Q 009972 433 --FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 433 --~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfG 510 (521)
...++++|++.. ++.+.+... ...++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 98 ~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~DFG 171 (294)
T PHA02882 98 RMYYRFILLEKLVE-NTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYG 171 (294)
T ss_pred CceEEEEEEehhcc-CHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEEEcC
Confidence 134677777654 666666432 2357888999999999999999998 99999999999999999999999999
Q ss_pred hhhhc
Q 009972 511 LSFLL 515 (521)
Q Consensus 511 la~~~ 515 (521)
+|+.+
T Consensus 172 la~~~ 176 (294)
T PHA02882 172 IASHF 176 (294)
T ss_pred Cceee
Confidence 99865
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.9e-19 Score=163.94 Aligned_cols=154 Identities=17% Similarity=0.155 Sum_probs=124.7
Q ss_pred cCHHHHHHHHhhhhhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEe
Q 009972 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYC 427 (521)
Q Consensus 350 ~~~~~l~~~~~~f~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~ 427 (521)
.+..|++.. ..+|.|.-|.|++++.+ +|..+|||.+.... .....+++...++++.+- ..|.||+.+|||
T Consensus 89 ~dindl~~l-----~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~---Nkee~kRILmDldvv~~s~dcpyIV~c~GyF 160 (391)
T KOG0983|consen 89 ADINDLENL-----GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVQCFGYF 160 (391)
T ss_pred cChHHhhhH-----HhhcCCCccceEEEEEcccceEEEEEeecccC---CHHHHHHHHHhhhHHhhccCCCeeeeeeeEE
Confidence 344555544 46999999999999997 58899999985443 233456778888877766 489999999999
Q ss_pred ecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeC
Q 009972 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 428 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~ 507 (521)
..+. ..++.||.|.- ..+.+++ +...++++...-++...+..||.||.+++ +|+|||+||+|||+|+.|++|++
T Consensus 161 i~n~--dV~IcMelMs~-C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlC 234 (391)
T KOG0983|consen 161 ITNT--DVFICMELMST-CAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLC 234 (391)
T ss_pred eeCc--hHHHHHHHHHH-HHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEee
Confidence 8876 68899999965 5555554 33346889989999999999999998874 99999999999999999999999
Q ss_pred CCchhhhccc
Q 009972 508 PLCLSFLLVS 517 (521)
Q Consensus 508 DfGla~~~~~ 517 (521)
|||++-.+.+
T Consensus 235 DFGIsGrlvd 244 (391)
T KOG0983|consen 235 DFGISGRLVD 244 (391)
T ss_pred cccccceeec
Confidence 9999877654
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-20 Score=181.78 Aligned_cols=158 Identities=13% Similarity=0.059 Sum_probs=133.4
Q ss_pred ccCHHHHHHHHhhhhhhhCcCCCeeEEEEEeCCCC-EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEe
Q 009972 349 RFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (521)
Q Consensus 349 ~~~~~~l~~~~~~f~~~lg~G~~g~Vy~~~~~~~~-~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~ 427 (521)
...++|++.. ..||-|+||.|-.++.+... .+|+|.++++ +..+....+.+..|-.+|...+.|.||+++..|
T Consensus 416 ~v~l~dl~~i-----aTLGvGgFGRVELV~~~~~~~~fAlKilkK~-hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf 489 (732)
T KOG0614|consen 416 QVKLSDLKRI-----ATLGVGGFGRVELVKVNSQKATFALKILKKK-HIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF 489 (732)
T ss_pred ccchhhhhhh-----hhcccCccceEEEEEecccchHHHHHHHhHh-hccchhHHHHHHhHHHHHHhcCchHHHHHHHHh
Confidence 3444555543 35999999999999887544 4888887544 333333456788999999999999999999999
Q ss_pred ecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeC
Q 009972 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 428 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~ 507 (521)
.++. +.|++||-|-+|.++..++.++ .++..+..-|+..+.+|++|||+. +||+|||||+|.+||.+|.+||.
T Consensus 490 rd~k--yvYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLV 562 (732)
T KOG0614|consen 490 RDSK--YVYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLV 562 (732)
T ss_pred ccch--hhhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEe
Confidence 9988 8999999999999999997655 489999999999999999999999 99999999999999999999999
Q ss_pred CCchhhhccccc
Q 009972 508 PLCLSFLLVSSI 519 (521)
Q Consensus 508 DfGla~~~~~~~ 519 (521)
|||+||.+..+.
T Consensus 563 DFGFAKki~~g~ 574 (732)
T KOG0614|consen 563 DFGFAKKIGSGR 574 (732)
T ss_pred ehhhHHHhccCC
Confidence 999999987653
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-18 Score=158.54 Aligned_cols=143 Identities=27% Similarity=0.387 Sum_probs=125.0
Q ss_pred hCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCC
Q 009972 366 IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|.+|.||+++..+ ++.+++|.+....... ..+.+.+|+..++.++|++++++++++.... ..++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEELLREIEILKKLNHPNIVKLYGVFEDEN--HLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHHHHHHHHHHHhcCCCCeeeEeeeeecCC--eEEEEEecCCC
Confidence 6899999999999974 8899999985443211 3457999999999999999999999998876 78999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeeeCCCchhhhccc
Q 009972 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 445 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-~~~~kl~DfGla~~~~~ 517 (521)
++|.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||++++ ++.++|+|||.+.....
T Consensus 76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~ 145 (215)
T cd00180 76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTS 145 (215)
T ss_pred CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccC
Confidence 99999997442 3589999999999999999999999 9999999999999999 89999999999886543
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-18 Score=162.28 Aligned_cols=146 Identities=24% Similarity=0.303 Sum_probs=127.3
Q ss_pred hhhhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|++|.||++...+ ++.+++|.+...... ...+.+.+|++.+.+++|+|++++++++.... ..++++||
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~e~ 78 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDPE--PLYLVMEY 78 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecCC--ceEEEEec
Confidence 3679999999999999975 889999998543221 23567899999999999999999999998776 78999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++++|.+++..... .+++.....++.+++.++.|||.. +++|+|++|+||++++++.++|+|||++..+..
T Consensus 79 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~ 150 (225)
T smart00221 79 CEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHR 150 (225)
T ss_pred cCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecC
Confidence 999999999974332 279999999999999999999998 999999999999999999999999999887654
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-18 Score=161.14 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=114.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|++|.||+|.. +|..+++|+...+.... .......+.+|++++..++|+++.....++.... ..+++|
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE--NFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC--CCEEEE
Confidence 4689999999999988 56678888764332111 1112346889999999999999988888776655 678999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++++|.+++... .+ .+..++.+++.+|+++|+. +++|||++|+|||++ ++.++|+|||.++...
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence 999999999998532 22 8899999999999999999 999999999999999 7899999999988643
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3e-18 Score=185.12 Aligned_cols=150 Identities=34% Similarity=0.602 Sum_probs=129.5
Q ss_pred CChhHHHHHHHHHHhhccCCCCCCCCCCCCCCCCC-----CccceeeCCC--C--CCEEEEEecCCCCcccCCccccCCC
Q 009972 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPC-----HWTGIACSDA--R--DRVLKINISGSSLKGFLAPELGLLT 94 (521)
Q Consensus 24 ~~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c-----~w~gv~C~~~--~--~~l~~L~L~~n~l~~~~p~~l~~l~ 94 (521)
..+.|..||+++|+.+. ++. ..+|+. +|| .|.||.|... . ..|+.|+|++|.++|.+|+.++.++
T Consensus 369 t~~~~~~aL~~~k~~~~-~~~--~~~W~g---~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 369 TLLEEVSALQTLKSSLG-LPL--RFGWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred cCchHHHHHHHHHHhcC-Ccc--cCCCCC---CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 56689999999999985 432 247963 455 6999999521 1 2489999999999999999999999
Q ss_pred CCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCC-CCCCEEeC
Q 009972 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNL-ISLEELHL 173 (521)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-~~L~~L~L 173 (521)
+|+.|+|++|++.|.+|..++.+++|+.|+|++|+++|.+|+.++++++|+.|+|++|+++|.+|..++.+ .++..+++
T Consensus 443 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~ 522 (623)
T PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNF 522 (623)
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999998764 46778888
Q ss_pred CCCcCC
Q 009972 174 DRNRLQ 179 (521)
Q Consensus 174 s~N~l~ 179 (521)
.+|...
T Consensus 523 ~~N~~l 528 (623)
T PLN03150 523 TDNAGL 528 (623)
T ss_pred cCCccc
Confidence 888654
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-18 Score=185.84 Aligned_cols=147 Identities=16% Similarity=0.121 Sum_probs=100.7
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEeC-C----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEee---
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTMK-G----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR--- 428 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~~-~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--- 428 (521)
.++|. +.||+|+||.||+|++. + +..||+|++..... .+.+..| .+.+..+.+++.+...+.
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 34454 78999999999999986 4 68899998732211 1111111 122222333333222111
Q ss_pred -cCCCCceEEEEeeCCCCChhhhhhcCCC------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 009972 429 -ESSPFTRMLVFDYASNGTLYEHLHYGER------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTIS 489 (521)
Q Consensus 429 -~~~~~~~~lv~ey~~~g~L~~~l~~~~~------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~ 489 (521)
.......++||||+++|+|.++++.... ....+..+..|+.|++.||+|||+. +|+||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHR 279 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHR 279 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 1122278999999999999999864321 0012234567999999999999998 99999
Q ss_pred CCCCCCeeecC-CCCeeeCCCchhhhcc
Q 009972 490 ELNSSAVYLTE-DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 490 dlk~~NILld~-~~~~kl~DfGla~~~~ 516 (521)
||||+|||+++ ++.+||+|||+|+.+.
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~ 307 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLR 307 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccc
Confidence 99999999986 5899999999998654
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.4e-18 Score=161.33 Aligned_cols=143 Identities=15% Similarity=0.188 Sum_probs=109.6
Q ss_pred hhhCcCCCeeEEEEE--eCCCCEEEEEEeeeeccccc--------------------hhhHHHHHHHHHHHhccCCCc--
Q 009972 364 NIIGSSPDSLVYKGT--MKGGPEIAVISLCIKEEHWT--------------------GYLELYFQREVADLARINHEN-- 419 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~--~~~~~~vavk~~~~~~~~~~--------------------~~~~~~~~~E~~~l~~l~H~n-- 419 (521)
+.||+|++|.||+|. ..+|+.||+|.+........ ......+.+|++.+.++.+..
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~ 113 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVP 113 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 789999999999998 46899999999864321100 011234678999999997633
Q ss_pred cceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-eeecCCCCCCeee
Q 009972 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP-FTISELNSSAVYL 498 (521)
Q Consensus 420 iv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivH~dlk~~NILl 498 (521)
+.+++++ . ..++||||++++++..+.... ..+...+...++.+++.+++|||+. + ++|||+||+||++
T Consensus 114 ~p~~~~~---~---~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIli 182 (237)
T smart00090 114 VPKPIAW---R---RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNILV 182 (237)
T ss_pred CCeeeEe---c---CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEEE
Confidence 3344432 2 358999999998887765322 2355666789999999999999999 8 9999999999999
Q ss_pred cCCCCeeeCCCchhhhcccc
Q 009972 499 TEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 499 d~~~~~kl~DfGla~~~~~~ 518 (521)
+ +++++|+|||.|+.....
T Consensus 183 ~-~~~i~LiDFg~a~~~~~~ 201 (237)
T smart00090 183 H-DGKVVIIDVSQSVELDHP 201 (237)
T ss_pred E-CCCEEEEEChhhhccCCc
Confidence 9 889999999999876543
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-18 Score=162.05 Aligned_cols=138 Identities=22% Similarity=0.273 Sum_probs=121.2
Q ss_pred CCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCCCChh
Q 009972 370 PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLY 448 (521)
Q Consensus 370 ~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~ 448 (521)
+||.||+|+.. +++.+++|++...... ...+.+.+|++.+++++|+|++++++++.... ..++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIK---KKRERILREISILKKLKHPNIVRLYDVFEDED--KLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccc---cHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC--EEEEEEeCCCCCCHH
Confidence 58999999997 4889999998544322 11467999999999999999999999998876 799999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 449 EHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 449 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++..... +++..+..++.+++++++|||.. +++|+||+|+||++++++.++|+|||.+..+..
T Consensus 76 ~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~ 139 (244)
T smart00220 76 DLLKKRGR--LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDP 139 (244)
T ss_pred HHHHhccC--CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecc
Confidence 99864432 89999999999999999999999 999999999999999999999999999887654
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-19 Score=172.72 Aligned_cols=145 Identities=18% Similarity=0.107 Sum_probs=120.6
Q ss_pred hhhhhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEE
Q 009972 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
|-.+||+|+||+|..+.-++ .+.+|||++...-- .+....+--+.|-++|+-- +-|.+++++.++.+-+ ..|.||
T Consensus 353 Fl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDVi-iQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD--RLyFVM 429 (683)
T KOG0696|consen 353 FLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD--RLYFVM 429 (683)
T ss_pred eEEEeccCccceeeeecccCcchhhhhhhhcccee-eecCcccceehhhhheecCCCCchHHHHHHHhhhhh--heeeEE
Confidence 44899999999999998874 56799998843321 1112223446677777766 6789999999998877 899999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
||+.+|+|.-.++.-+ .+.++..+-+|.+||-||-|||++ +|++||||..|||||.+|++||+|||+++-
T Consensus 430 EyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred EEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccc
Confidence 9999999998886433 377888999999999999999999 999999999999999999999999999884
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.75 E-value=7e-18 Score=156.99 Aligned_cols=136 Identities=15% Similarity=0.204 Sum_probs=108.3
Q ss_pred hhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.||+|+||.||+|.+ ++..+++|....+.... ......++.+|++++..++|+++.....++...+ ..++|||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD--NKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC--CCEEEEE
Confidence 489999999999986 56789998864332111 1112356789999999999988766655555544 5789999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+++++|.+++.... . .++.+++++|+++|+. +++|||++|+||+++ ++.+++.|||+++...
T Consensus 78 ~~~g~~l~~~~~~~~------~---~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~ 140 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN------D---ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSD 140 (199)
T ss_pred EECCccHHHHHhhcH------H---HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence 999999999875321 0 8899999999999999 999999999999999 8999999999988754
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.6e-18 Score=181.01 Aligned_cols=137 Identities=15% Similarity=0.128 Sum_probs=110.8
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccc----cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||+||+|.+.+.. +++|+...+... ......+++.+|++++..++|++++....++.... ..++|
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv 414 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE--EKTIV 414 (535)
T ss_pred cceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC--CCEEE
Confidence 378999999999999986554 444433222111 11122356899999999999999998888877655 67899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++++|.+++. .+..++.+++++|.|||+. +++|||+||+|||+ +++.++|+|||+++...
T Consensus 415 ~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~~ 478 (535)
T PRK09605 415 MEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSD 478 (535)
T ss_pred EEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccCC
Confidence 99999999999874 4578999999999999999 99999999999999 67899999999998754
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.2e-18 Score=156.23 Aligned_cols=140 Identities=11% Similarity=0.185 Sum_probs=115.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeE-eecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGY-CRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~-~~~~~~~~~~lv~e 440 (521)
+.+|+|.||.+-.++++ +.+.+++|.+.... ...++|.+|...--.+ .|.||+.-++. +++.+ ..+.++|
T Consensus 30 k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d--~YvF~qE 102 (378)
T KOG1345|consen 30 KQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD--AYVFVQE 102 (378)
T ss_pred HHhcccceeeEEeeeccCCceEEEeeccCcch-----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCc--eEEEeec
Confidence 78999999999999998 46778888874322 2356799998875555 68999987765 44444 7889999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-c-CCCCeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL-T-EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl-d-~~~~~kl~DfGla~~~~ 516 (521)
|+|.|+|.+-+.. ..+.+....+++.|++.|+.|||+. .+||||||.+|||| + +..++||+|||+.+-.+
T Consensus 103 ~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred cCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccC
Confidence 9999999988743 2478899999999999999999999 99999999999998 3 44589999999987644
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.6e-18 Score=155.94 Aligned_cols=137 Identities=16% Similarity=0.140 Sum_probs=106.8
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccc------------------hhhHHHHHHHHHHHhccCCCc--cce
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT------------------GYLELYFQREVADLARINHEN--TGK 422 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~------------------~~~~~~~~~E~~~l~~l~H~n--iv~ 422 (521)
.+.||+|+||.||++..++|+.||||.+........ ......+.+|..++.++.|++ +..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~ 99 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK 99 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence 378999999999999998899999998754321100 011234678999999998874 444
Q ss_pred eeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 009972 423 LLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 423 l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~ 502 (521)
.++. . ..++||||+++++|...... .....++.+++.++.++|+. +++||||||+||++++++
T Consensus 100 ~~~~----~--~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 100 PIDW----N--RHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDDE 162 (198)
T ss_pred eeec----C--CceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCCC
Confidence 4432 2 46899999999998765421 23467889999999999998 999999999999999999
Q ss_pred CeeeCCCchhhhcc
Q 009972 503 SPKVSPLCLSFLLV 516 (521)
Q Consensus 503 ~~kl~DfGla~~~~ 516 (521)
.++|+|||++.-..
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999996554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-17 Score=151.44 Aligned_cols=134 Identities=19% Similarity=0.175 Sum_probs=103.5
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccch-hhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTG-YLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
..|++|+||+||.+.- ++..++.+.+... .-+.. -....|.+|+++|.+++ |+++.+++++ + ..+++|||
T Consensus 8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~-~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~--~~~lvmey 79 (218)
T PRK12274 8 EPLKSDTFGRILLVRG-GERKFVRRDLSAA-PWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----D--GRHLDRSY 79 (218)
T ss_pred eeecCCCcceEEEeec-CCceeeecccccc-hhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----c--CEEEEEee
Confidence 6799999999997765 5666776665322 11111 11235889999999995 5889999886 2 46899999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC-CCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL-NSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dl-k~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++.+|...+.. ....+..+++++|.|+|+. +|+|||| ||+|||+++++.++|+|||+|.....
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP 144 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence 999888754421 1245778999999999999 9999999 79999999999999999999985543
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.6e-19 Score=179.59 Aligned_cols=143 Identities=21% Similarity=0.253 Sum_probs=124.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..+|.|.||.|||++.. .++..|+|.++....+ .-+-...|+-+++..+|||||.++|-|.... ..++.|||+
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~d----d~~~iqqei~~~~dc~h~nivay~gsylr~d--klwicMEyc 94 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD----DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD--KLWICMEYC 94 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCc----cccccccceeeeecCCCcChHHHHhhhhhhc--CcEEEEEec
Confidence 67999999999999996 6888999988544322 2234678999999999999999999988766 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
.+|+|++..+... ++++.++...++...+|++|||+. +-+|||||-.|||+++.+.+|++|||.+-.+..
T Consensus 95 gggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 95 GGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred CCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 9999999886443 689999999999999999999999 999999999999999999999999998876654
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-18 Score=178.50 Aligned_cols=140 Identities=21% Similarity=0.298 Sum_probs=112.3
Q ss_pred hhhCcCCCe-eEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDS-LVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g-~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+++|.|+.| .||+|.+ +|++||||++... ...-..+|+..|+.- +|||||++++.-.+.. ..||..|.
T Consensus 515 eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e-------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q--F~YIalEL 584 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVY-EGREVAVKRLLEE-------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQ--FLYIALEL 584 (903)
T ss_pred HHcccCCCCcEEEEEee-CCceehHHHHhhH-------hHHHHHHHHHHHHhccCCCceEEEEeeccCCc--eEEEEehH
Confidence 789999987 5899999 5579999998432 223467899999888 7999999988777666 89999999
Q ss_pred CCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---C--CCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---D--FSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~--~~~kl~DfGla~~ 514 (521)
|.. +|.+++... ......-...+.+..|++.||++||+. +||||||||.||||+. + .+|+|+|||++|.
T Consensus 585 C~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 585 CAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred hhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 977 999999642 111111134567889999999999997 9999999999999975 3 5899999999998
Q ss_pred ccc
Q 009972 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
+..
T Consensus 661 l~~ 663 (903)
T KOG1027|consen 661 LAG 663 (903)
T ss_pred cCC
Confidence 764
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.4e-18 Score=160.11 Aligned_cols=143 Identities=16% Similarity=0.118 Sum_probs=121.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+||+|+|++|..++++ +.+.+|+|++++.-.. +.......+.|-.+.... +||.+|-+..++.+.+ ..+.|.||
T Consensus 256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~n-ddedidwvqtek~vfe~asn~pflvglhscfqtes--rlffviey 332 (593)
T KOG0695|consen 256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES--RLFFVIEY 332 (593)
T ss_pred eeecCcchhhhhheehcccceeeehhhHHHHhcC-CcccchhHHhhHHHHHhccCCCeEEehhhhhcccc--eEEEEEEE
Confidence 78999999999999997 5788999987433221 112234567777777766 7999999999999887 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|.-+++.. +.+++....-+...|+-||.|||++ +|++||||..|||+|..|++|++|||++|-
T Consensus 333 v~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 333 VNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred ecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhc
Confidence 9999998877643 3589999999999999999999999 999999999999999999999999999884
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=148.83 Aligned_cols=137 Identities=11% Similarity=0.115 Sum_probs=108.2
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHH------HHHHHHHHHhccCCCccceeeeEeecCC------
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL------YFQREVADLARINHENTGKLLGYCRESS------ 431 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 431 (521)
+++|.|+||.||.... ++..+|+|.+..+.... ....+ .+.+|+..+.+++|++|..+..++....
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~-~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~ 114 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT-ERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRY 114 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCch-HHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccc
Confidence 7899999999999655 56689999985443221 12212 2689999999999999999998865332
Q ss_pred CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCch
Q 009972 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 432 ~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGl 511 (521)
....++||||+++.+|.++.. ++. ....+++.++..+|+. +++|||+||+||++++++ ++|+|||.
T Consensus 115 ~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg~ 180 (232)
T PRK10359 115 AHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLSG 180 (232)
T ss_pred cCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEECCC
Confidence 114789999999999988742 222 3456999999999999 999999999999999988 99999998
Q ss_pred hhhcc
Q 009972 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
.+...
T Consensus 181 ~~~~~ 185 (232)
T PRK10359 181 KRCTA 185 (232)
T ss_pred ccccc
Confidence 77653
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-17 Score=167.15 Aligned_cols=139 Identities=16% Similarity=0.149 Sum_probs=117.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
..+|.|+|+.|-++... +++..+||++..... +-.+|+.++... +||||+++.+.|.+.. +.++|||+
T Consensus 328 ~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~--------~~~~e~~~~~~~~~h~niv~~~~v~~~~~--~~~~v~e~ 397 (612)
T KOG0603|consen 328 EELGEGSFSAVKYCESSPTDQEPAVKIISKRAD--------DNQDEIPISLLVRDHPNIVKSHDVYEDGK--EIYLVMEL 397 (612)
T ss_pred cccCCCCccceeeeeccccccchhheecccccc--------ccccccchhhhhcCCCcceeecceecCCc--eeeeeehh
Confidence 56999999999999886 678899999854321 234577666655 8999999999999887 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-cCCCCeeeCCCchhhhcccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL-TEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl-d~~~~~kl~DfGla~~~~~~ 518 (521)
+.+|-+.+.+..... .. ..+..|+.+++.|+.|||++ +||||||||+|||+ ++.++++|+|||.++.+.+.
T Consensus 398 l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 398 LDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred ccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999988888864332 22 67788999999999999998 99999999999999 58999999999999987654
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.9e-16 Score=136.07 Aligned_cols=135 Identities=16% Similarity=0.066 Sum_probs=112.9
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC--CccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.+|+|.++.||+++..+ ..+++|....... ...+.+|+..+..++| .++.+++++....+ ..++++||
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~--~~~~v~e~ 74 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGESDG--WSYLLMEW 74 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--ccEEEEEe
Confidence 468999999999999866 6789988633211 3568899999999977 58999988887665 78999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++.+..+ ++..+..++.+++++++++|.....+++|+|++|+||++++++.+++.|||.++...
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP 140 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence 998777643 567778899999999999998755579999999999999999999999999988654
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.1e-18 Score=148.08 Aligned_cols=156 Identities=26% Similarity=0.453 Sum_probs=132.2
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|.||+|.++- +|+.+..|.+|+.|++++|+++ .+|.+++.+++|+.|+++-|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~~-vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLTV-VPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCceee-cCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 3578889999999986 7888999999999999999998 68889999999999999999998 8999999999999999
Q ss_pred cccccCC-CCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCC
Q 009972 149 LQSNGLT-GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 149 Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~i 227 (521)
|++|+++ ..+|..|..++.|+.|+|+.|.|. .+|. ....+++|+.|.+.+|.+- ++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~---------------------dvg~lt~lqil~lrdndll-~l 165 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPP---------------------DVGKLTNLQILSLRDNDLL-SL 165 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCCh---------------------hhhhhcceeEEeeccCchh-hC
Confidence 9999987 468889999999999999999998 5554 2445788999999999887 78
Q ss_pred cccccc---CCCcccCCCccCCCCCc
Q 009972 228 PKCLEY---LPSTSFQGNCLQNKDPK 250 (521)
Q Consensus 228 p~~l~~---l~~l~~~~N~l~~~~~~ 250 (521)
|..++. +.++.++||.++-+.|.
T Consensus 166 pkeig~lt~lrelhiqgnrl~vlppe 191 (264)
T KOG0617|consen 166 PKEIGDLTRLRELHIQGNRLTVLPPE 191 (264)
T ss_pred cHHHHHHHHHHHHhcccceeeecChh
Confidence 877654 56788899988776554
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.1e-16 Score=153.83 Aligned_cols=135 Identities=19% Similarity=0.187 Sum_probs=118.5
Q ss_pred hhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
++||+|.|++||++.+.. .+.||+|.+..... .....+|+++|..+ -+.||+++.+++...+ +..+|
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~------p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd--~v~iv 113 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS------PSRILNELEMLYRLGGSDNIIKLNGCFRNND--QVAIV 113 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeecccccC------chHHHHHHHHHHHhccchhhhcchhhhccCC--eeEEE
Confidence 789999999999998743 57899999855432 34688999999999 6999999999998777 89999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeeeCCCchhhh
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFL 514 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-~~~~kl~DfGla~~ 514 (521)
+||+++-+-.+++. .++.+....+...+..||+|+|.. +||||||||+|+|.+. .+.-.|.|||+|..
T Consensus 114 lp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 114 LPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred ecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHH
Confidence 99999999888885 367889999999999999999999 9999999999999985 57889999999974
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.6e-16 Score=153.51 Aligned_cols=129 Identities=17% Similarity=0.176 Sum_probs=108.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-----C---CccceeeeEeec--CCC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----H---ENTGKLLGYCRE--SSP 432 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~g~~~~--~~~ 432 (521)
.+||.|.|++||.|.+. +.+.||+|+++. . ....+....||++|+.++ | ..||+|+++|.- .++
T Consensus 84 rKLGWGHFSTVWLawDtq~~r~VAlKVvKS--A---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG 158 (590)
T KOG1290|consen 84 RKLGWGHFSTVWLAWDTQNKRYVALKVVKS--A---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNG 158 (590)
T ss_pred EeccccccceeEEEeeccCCeEEEEEEEeh--h---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCC
Confidence 78999999999999886 568899998732 2 234566789999999883 2 459999999864 334
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~ 500 (521)
.+.+||+|++.. +|..+|....-+.++.....+|+.||..||.|||.+| +|||-||||+|||+..
T Consensus 159 ~HVCMVfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 159 QHVCMVFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCS 223 (590)
T ss_pred cEEEEEehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeec
Confidence 478999999966 9999998665566999999999999999999999999 9999999999999953
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=8e-16 Score=141.59 Aligned_cols=141 Identities=13% Similarity=0.146 Sum_probs=98.4
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhh--------------------HHHHHHHHHHHhccCCCc--cc
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL--------------------ELYFQREVADLARINHEN--TG 421 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~H~n--iv 421 (521)
+.||+|+||+||+|+..+++.||||.+........... ......|...+.++.+.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 57999999999999998899999998754321100000 011235666666665443 33
Q ss_pred eeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecC
Q 009972 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~ 500 (521)
+.+++ . ..++||||++++.+....-.... .. .+..+++.+++.++.++|. . +|+||||||+||+++
T Consensus 83 ~~~~~----~--~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~- 149 (187)
T cd05119 83 KPIDL----N--RHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD- 149 (187)
T ss_pred ceEec----C--CCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-
Confidence 33332 1 45899999999654321110100 11 5678899999999999999 7 999999999999999
Q ss_pred CCCeeeCCCchhhhccc
Q 009972 501 DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~~ 517 (521)
++.++++|||.+.....
T Consensus 150 ~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CCcEEEEECcccccccC
Confidence 89999999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.7e-16 Score=151.10 Aligned_cols=150 Identities=15% Similarity=0.153 Sum_probs=123.0
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
.++.+|.||.||+|.+++ .++|.+|.+... .+.-....+..|-..+..+.|||+.++.+.+..+.. ..++
T Consensus 290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~---AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~-~P~V 365 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH---ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA-TPFV 365 (563)
T ss_pred hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc---ccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC-cceE
Confidence 688999999999997653 345666655221 112223468889999999999999999999976543 6899
Q ss_pred EEeeCCCCChhhhhh-----c-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCch
Q 009972 438 VFDYASNGTLYEHLH-----Y-GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 438 v~ey~~~g~L~~~l~-----~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGl 511 (521)
+|.|+.-|+|..++. + ...+.++-.+.+.++.|++.||+|||.. +|||.||.++|++||+...+||+|-.+
T Consensus 366 ~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsaL 442 (563)
T KOG1024|consen 366 LYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSAL 442 (563)
T ss_pred EEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccchh
Confidence 999999999999997 2 1235678888999999999999999999 999999999999999999999999999
Q ss_pred hhhcccccc
Q 009972 512 SFLLVSSII 520 (521)
Q Consensus 512 a~~~~~~~~ 520 (521)
+|-+.++.|
T Consensus 443 SRDLFP~DY 451 (563)
T KOG1024|consen 443 SRDLFPGDY 451 (563)
T ss_pred ccccCcccc
Confidence 998876543
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.8e-17 Score=150.72 Aligned_cols=142 Identities=19% Similarity=0.180 Sum_probs=114.8
Q ss_pred hhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----CCceEEEE
Q 009972 365 IIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLVF 439 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~ 439 (521)
.+|.|.- .|.-+.+. .++.||+|++...... ....++..+|..++..+.|+|+++++.++.-.. ..+.|+||
T Consensus 24 p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n--~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~ 100 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN--QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVM 100 (369)
T ss_pred ccCCCCc-eEEecchhhccCceehhhhcCcccc--CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHH
Confidence 4666666 45555443 5788999998655333 223456789999999999999999999986432 11579999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||.. +|.+.++. .++..+...|..|++.|+.|||+. +|+||||||+||++..+..+||.|||+|+--+.
T Consensus 101 e~m~~-nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 101 ELMDA-NLCQVILM----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred Hhhhh-HHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCc
Confidence 99976 99999872 378889999999999999999999 999999999999999999999999999986443
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.2e-15 Score=143.77 Aligned_cols=142 Identities=12% Similarity=0.031 Sum_probs=108.8
Q ss_pred hhhC-cCCCeeEEEEEeCCCCEEEEEEeeeec---------cccchhhHHHHHHHHHHHhccCCCcc--ceeeeEeecCC
Q 009972 364 NIIG-SSPDSLVYKGTMKGGPEIAVISLCIKE---------EHWTGYLELYFQREVADLARINHENT--GKLLGYCRESS 431 (521)
Q Consensus 364 ~~lg-~G~~g~Vy~~~~~~~~~vavk~~~~~~---------~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~~ 431 (521)
.+|| .|+.|+||++... +..+++|.+..+. ...+......+.+|++++.+++|+++ ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5787 8999999999885 5678998875322 01112334578999999999998885 67777754432
Q ss_pred CC--ceEEEEeeCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCC
Q 009972 432 PF--TRMLVFDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 432 ~~--~~~lv~ey~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~D 508 (521)
.. ..++|+||+++ .+|.+++... +++.. .+.++++++.+||+. +|+||||||+|||++.++.++|+|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEE
Confidence 11 23599999997 6999888532 24443 357899999999999 999999999999999999999999
Q ss_pred Cchhhhcc
Q 009972 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||.++...
T Consensus 186 fg~~~~~~ 193 (239)
T PRK01723 186 FDRGELRT 193 (239)
T ss_pred CCCcccCC
Confidence 99988754
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.2e-15 Score=135.31 Aligned_cols=141 Identities=14% Similarity=0.156 Sum_probs=113.2
Q ss_pred hhhCcCCCeeEEEEEe-CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC-CccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
..||.|+||.+|.|.. .+|.+||+|.-..+.. ..+...|.++...++| ..|..+.-|..+.+ +-.+|||.
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~------hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~--ynvlVMdL 92 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAK------HPQLLYESKVYRILQGGVGIPHIRHYGTEKD--YNVLVMDL 92 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCC------CcchhHHHHHHHHhccCCCCchhhhhccccc--cceeeeec
Confidence 7899999999999987 4799999997533221 2346788888888876 55555665665555 77999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~~~~kl~DfGla~~~~~ 517 (521)
... +|+++..-.. +.++..+.+-.|-|+..-++|+|.+ ++|||||||+|+|..- ...+.++|||+||.+-+
T Consensus 93 LGP-sLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 93 LGP-SLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred cCc-cHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 965 9999886433 2488999999999999999999999 9999999999999863 35689999999997654
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.1e-16 Score=156.69 Aligned_cols=180 Identities=22% Similarity=0.268 Sum_probs=130.9
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.++++.|+|.+|.|+..-.+++..++.|++||||.|.|+.+.-.+|..=.++++|+|++|+|+..--..|.++.+|..|.
T Consensus 124 sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLK 203 (873)
T ss_pred ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeee
Confidence 46799999999999988888899999999999999999865555677767899999999999876677888999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCc-----------------------ccccccccccccCCCC
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG-----------------------YTANIHGMYASSANLT 205 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~-----------------------~~~~l~~l~l~~n~l~ 205 (521)
|++|+++...+..|.+|++|+.|+|..|++. .+-...+.+ -..+++.++++.|+++
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~ir-ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~ 282 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIR-IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ 282 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhcccccee-eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh
Confidence 9999999655566777999999999999875 221110100 0123455667777665
Q ss_pred C-----cccCCCCCEEeccCCccccCCcccc---ccCCCcccCCCccCCCCC
Q 009972 206 G-----LCHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 206 ~-----~~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
. +-.|+.|+.||||+|.+...-++.+ .+|..|+++.|.++.+++
T Consensus 283 ~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~ 334 (873)
T KOG4194|consen 283 AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDE 334 (873)
T ss_pred hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCCh
Confidence 3 3346667777777776665445443 345556666666665544
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-15 Score=144.71 Aligned_cols=142 Identities=11% Similarity=0.105 Sum_probs=118.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-C-C----ccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H-E----NTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H-~----niv~l~g~~~~~~~~~~~ 436 (521)
..+|+|.||.|-++... .+..||+|++..- ...++..+-|++++.++. + | -+|.+.+|+.-.+ ..+
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg--hiC 167 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKNV-----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG--HIC 167 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHHH-----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC--ceE
Confidence 68999999999999886 4688999987322 234566788999999993 2 2 2678888887666 789
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-----------------
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT----------------- 499 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld----------------- 499 (521)
+|+|.+.- ++++++....-.+++..++..|+.|++++++|||+. +++|-||||+|||+-
T Consensus 168 ivfellG~-S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 168 IVFELLGL-STFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred EEEeccCh-hHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCcccee
Confidence 99999954 999999877777899999999999999999999999 999999999999983
Q ss_pred ---CCCCeeeCCCchhhhcc
Q 009972 500 ---EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ---~~~~~kl~DfGla~~~~ 516 (521)
..-.+||.|||-|++-.
T Consensus 244 r~~ks~~I~vIDFGsAtf~~ 263 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDH 263 (415)
T ss_pred ccCCCcceEEEecCCcceec
Confidence 12358999999998754
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.9e-17 Score=163.15 Aligned_cols=166 Identities=27% Similarity=0.369 Sum_probs=76.0
Q ss_pred EEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcc-cCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
++.||||+|+++. .|..+..-+++-.|+||+|+|. .||.. |-+|+.|-+||||+|++. .+|+.+..|..|++|+||
T Consensus 105 Lt~lDLShNqL~E-vP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls 181 (1255)
T KOG0444|consen 105 LTILDLSHNQLRE-VPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLS 181 (1255)
T ss_pred ceeeecchhhhhh-cchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcC
Confidence 4455555555543 3444444444455555555544 22322 334444455555555544 444444444444444444
Q ss_pred cccCC-------------------------CCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCC
Q 009972 151 SNGLT-------------------------GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 151 ~N~l~-------------------------g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
+|.+. ..+|.++..|.+|..+|||.|.+. .+|+.... ..++..+++|+|.++
T Consensus 182 ~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~--l~~LrrLNLS~N~it 258 (1255)
T KOG0444|consen 182 NNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYK--LRNLRRLNLSGNKIT 258 (1255)
T ss_pred CChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhh--hhhhheeccCcCcee
Confidence 44321 123444444444444444444444 33432211 134444555555555
Q ss_pred Ccc----cCCCCCEEeccCCccccCCcccccc---CCCcccCCCcc
Q 009972 206 GLC----HLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCL 244 (521)
Q Consensus 206 ~~~----~l~~L~~L~ls~N~l~g~ip~~l~~---l~~l~~~~N~l 244 (521)
.+. ...+|+.|++|.|+++ .+|.++-. |+.|...+|++
T Consensus 259 eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL 303 (1255)
T KOG0444|consen 259 ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKL 303 (1255)
T ss_pred eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcc
Confidence 432 2345556666666665 55555433 23344444443
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-16 Score=159.06 Aligned_cols=177 Identities=21% Similarity=0.232 Sum_probs=129.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
++..|+|+.|+++..-...+.+|+.|+.|+||+|.|..+.++++.-+++|++||||+|+|+..-+.+|..|..|+.|+|+
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs 349 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLS 349 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccc
Confidence 56778888888877767777888888888888888887777778778888888888888886666777778888888888
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCC--CCcccccccccccccCCCCC-----cccCCCCCEEeccCCcc
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS--NSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l 223 (521)
+|.++..-...|..+++|+.|||++|.+++.+-+.. +.+ ...+..+.+.+|++.. +..+..|++|||.+|.+
T Consensus 350 ~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g-l~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 350 HNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG-LPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred ccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhcc-chhhhheeecCceeeecchhhhccCcccceecCCCCcc
Confidence 888876556677788888888888888887776632 222 3566777788887764 45678888888888888
Q ss_pred ccCCccccccC--CCcccCCCccCCCC
Q 009972 224 VGSIPKCLEYL--PSTSFQGNCLQNKD 248 (521)
Q Consensus 224 ~g~ip~~l~~l--~~l~~~~N~l~~~~ 248 (521)
...-|..|..+ ++|.+..-.|-+.|
T Consensus 429 aSIq~nAFe~m~Lk~Lv~nSssflCDC 455 (873)
T KOG4194|consen 429 ASIQPNAFEPMELKELVMNSSSFLCDC 455 (873)
T ss_pred eeecccccccchhhhhhhcccceEEec
Confidence 76777777654 34444444333333
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-14 Score=157.40 Aligned_cols=91 Identities=37% Similarity=0.710 Sum_probs=82.5
Q ss_pred CCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCC
Q 009972 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174 (521)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 174 (521)
.++.|+|++|.+.|.+|..+..+++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+++|.+|..++++++|++|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCccCCCC
Q 009972 175 RNRLQGAVPAG 185 (521)
Q Consensus 175 ~N~l~g~~p~~ 185 (521)
+|+++|.+|..
T Consensus 499 ~N~l~g~iP~~ 509 (623)
T PLN03150 499 GNSLSGRVPAA 509 (623)
T ss_pred CCcccccCChH
Confidence 99999888863
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-14 Score=145.50 Aligned_cols=140 Identities=16% Similarity=0.126 Sum_probs=112.1
Q ss_pred hhhCcCCCeeEEEEEeCCC--CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC----CccceeeeEee-cCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMKGG--PEIAVISLCIKEEHWTGYLELYFQREVADLARINH----ENTGKLLGYCR-ESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~~-~~~~~~~~ 436 (521)
..||+|+||.||.+..... ..+|+|........ . ...+..|+.++..+.+ +++..+++... ... ..+
T Consensus 24 ~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~---~-~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~--~~~ 97 (322)
T KOG1164|consen 24 KKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGS---K-PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED--FNF 97 (322)
T ss_pred eeccccCCceEEEEEecCCCCeeEEEEEEEecccC---C-CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc--eeE
Confidence 7899999999999998654 46777765432211 1 1146778888888863 57888888884 444 789
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-----CCeeeCCCch
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-----FSPKVSPLCL 511 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~-----~~~kl~DfGl 511 (521)
+||+.+.. +|.++........++-.+.++|+.|+..+|.++|+. +++||||||.|+++... ..+.|.|||+
T Consensus 98 iVM~l~G~-sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 98 IVMSLLGP-SLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEEeccCc-cHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99999855 999987544445699999999999999999999999 99999999999999754 4699999999
Q ss_pred hh
Q 009972 512 SF 513 (521)
Q Consensus 512 a~ 513 (521)
|+
T Consensus 174 ar 175 (322)
T KOG1164|consen 174 AR 175 (322)
T ss_pred Cc
Confidence 98
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-14 Score=149.08 Aligned_cols=146 Identities=16% Similarity=0.174 Sum_probs=103.5
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc-c-----------------------------hh------hHHHHHH
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW-T-----------------------------GY------LELYFQR 407 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~-----------------------------~~------~~~~~~~ 407 (521)
+.||.|++|.||+|++++|+.||||+........ . .. .+-+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 5799999999999999999999999974331100 0 00 0113566
Q ss_pred HHHHHhcc----CCCccceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHH-HHHHHhcCC
Q 009972 408 EVADLARI----NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR-GLKYLHTEL 482 (521)
Q Consensus 408 E~~~l~~l----~H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~-gL~yLH~~~ 482 (521)
|.+.+.++ +|.+-+.+-..|.+... ..+|||||+++++|.++...... .. ++.+++..++. .+..+|..
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~~- 276 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTS-ERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLRD- 276 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcC-CceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHhC-
Confidence 66666655 23334444444433221 57999999999999987653211 12 34567777766 47788988
Q ss_pred CCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 483 GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 483 ~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++|+|++|.||++++++.+++.|||+++.+.+
T Consensus 277 --g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 277 --GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred --CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 999999999999999999999999999987764
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.3e-16 Score=157.49 Aligned_cols=175 Identities=26% Similarity=0.305 Sum_probs=129.0
Q ss_pred CCCEEEEEecCCCCcc-cCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcc-cCCCcCCce
Q 009972 69 RDRVLKINISGSSLKG-FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVK 146 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~ 146 (521)
.++++.+++..|++.. -+|+++..|..|+.||||+|++. ..|..+..-+++-+|+||+|+|. .||.. |.+|+.|-.
T Consensus 77 Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLf 154 (1255)
T KOG0444|consen 77 LPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLF 154 (1255)
T ss_pred chhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhh
Confidence 3467788888888863 38999999999999999999998 78999999999999999999998 56654 678999999
Q ss_pred EecccccCCCCCchhhhCCCCCCEEeCCCCcCCc----cCCCCCCC-------------cc------cccccccccccCC
Q 009972 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQG----AVPAGSNS-------------GY------TANIHGMYASSAN 203 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~-------------~~------~~~l~~l~l~~n~ 203 (521)
||||+|++. .+|+.+..|..|++|+|++|.+.- .+|+-... .+ ..++..+++|.|+
T Consensus 155 LDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~ 233 (1255)
T KOG0444|consen 155 LDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENN 233 (1255)
T ss_pred hccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccC
Confidence 999999999 899999999999999999997641 34441100 00 1234445666666
Q ss_pred CCCc----ccCCCCCEEeccCCccccCCc---cccccCCCcccCCCccCCC
Q 009972 204 LTGL----CHLSQLKVADFSYNFFVGSIP---KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 204 l~~~----~~l~~L~~L~ls~N~l~g~ip---~~l~~l~~l~~~~N~l~~~ 247 (521)
+..+ -.+.+|+.|+||+|+++ .+- ..+.+++.|+++.|++..+
T Consensus 234 Lp~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~L 283 (1255)
T KOG0444|consen 234 LPIVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTVL 283 (1255)
T ss_pred CCcchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhccc
Confidence 6543 23566666666666665 222 2245666666777766554
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-14 Score=135.43 Aligned_cols=144 Identities=13% Similarity=0.153 Sum_probs=114.6
Q ss_pred hhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEe
Q 009972 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.++||+|.||.++.|+.- +++.||||.=..+++. .++..|.+..+.+ .-++|...+-|..... +-.||+|
T Consensus 33 GkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A------PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~--~NiLVid 104 (449)
T KOG1165|consen 33 GKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA------PQLRDEYRTYKLLGGTEGIPQVYYFGQEGK--YNILVID 104 (449)
T ss_pred ccccccCcceeeecccccccCceEEEEeccccCCc------chHHHHHHHHHHHcCCCCCCceeeeccccc--hhhhhhh
Confidence 378999999999999764 7899999986554422 2456666666665 4678877766555444 6789999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-----CCCeeeCCCchhhhc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-----~~~~kl~DfGla~~~ 515 (521)
.+.. +|+++..-.++ .++..+...||.|+..-++|+|++ .+|.|||||+|+||.. ...+.|.|||+||.+
T Consensus 105 LLGP-SLEDLFD~CgR-~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 105 LLGP-SLEDLFDLCGR-RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred hhCc-CHHHHHHHhcC-cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 9965 88888764443 589999999999999999999999 9999999999999974 346899999999988
Q ss_pred cccc
Q 009972 516 VSSI 519 (521)
Q Consensus 516 ~~~~ 519 (521)
.+..
T Consensus 180 rDp~ 183 (449)
T KOG1165|consen 180 RDPK 183 (449)
T ss_pred cCcc
Confidence 7653
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.9e-16 Score=136.01 Aligned_cols=139 Identities=27% Similarity=0.423 Sum_probs=124.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCC-CCCCcccCCCcCCceEe
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|++++|++.. +|..++.++.|+.|+++-|++. .+|..|+.++.|+.|||++|++. ..+|..|..|+.|+.|+
T Consensus 56 ~nlevln~~nnqie~-lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlraly 133 (264)
T KOG0617|consen 56 KNLEVLNLSNNQIEE-LPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALY 133 (264)
T ss_pred hhhhhhhcccchhhh-cChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHH
Confidence 468889999999987 7899999999999999999998 89999999999999999999996 46899999999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCc
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|+.|.|. .+|..++++++|+.|.+..|.+- .+|. .+..+.+|+.|.+.+|+++ .+|
T Consensus 134 l~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpk---------------------eig~lt~lrelhiqgnrl~-vlp 189 (264)
T KOG0617|consen 134 LGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPK---------------------EIGDLTRLRELHIQGNRLT-VLP 189 (264)
T ss_pred hcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcH---------------------HHHHHHHHHHHhcccceee-ecC
Confidence 9999999 89999999999999999999987 5664 3455778999999999998 778
Q ss_pred cccccC
Q 009972 229 KCLEYL 234 (521)
Q Consensus 229 ~~l~~l 234 (521)
..++++
T Consensus 190 pel~~l 195 (264)
T KOG0617|consen 190 PELANL 195 (264)
T ss_pred hhhhhh
Confidence 777665
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-13 Score=136.67 Aligned_cols=146 Identities=25% Similarity=0.310 Sum_probs=122.3
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCC-ccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE-NTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..+|.|+||.||++... ..+++|.+...... .......|.+|+.+++.+.|+ +++++.+++.... ..++++||+
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~ 80 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLES-KSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG--SLYLVMEYV 80 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhcc-chhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC--EEEEEEecC
Confidence 56889999999999987 67888888544322 112456799999999999988 7999999996655 579999999
Q ss_pred CCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-~~kl~DfGla~~~~~ 517 (521)
.++++.+++..... ..++......+..+++.++.|+|.. +++|||+||+||+++... .++++|||+++.+..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 99999977753321 2588999999999999999999999 899999999999999988 799999999985543
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5e-14 Score=140.05 Aligned_cols=144 Identities=16% Similarity=0.112 Sum_probs=118.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC------CCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN------HENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~g~~~~~~~~~~~ 436 (521)
...|+|-|++|.+|+.. .|.+||||++.... ...+.=.+|+++|.++. --+.++|+..|...+ +.+
T Consensus 438 ~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-----~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn--HLC 510 (752)
T KOG0670|consen 438 GYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-----VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN--HLC 510 (752)
T ss_pred eccccceeeeeeeccccCCCCeeEEEEeecch-----HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc--eeE
Confidence 45789999999999986 47899999985432 12334578999999984 357899988887766 899
Q ss_pred EEEeeCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeeeCCCchhhh
Q 009972 437 LVFDYASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~-~~~kl~DfGla~~ 514 (521)
||+|-+.- +|.++|..-+ ...|.......++.|+.-||..|-.. +|+|.||||.|||+.+. ...||||||-|-.
T Consensus 511 lVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 511 LVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred EEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCccccc
Confidence 99999876 9999997432 34588889999999999999999987 99999999999999875 5789999999887
Q ss_pred cccc
Q 009972 515 LVSS 518 (521)
Q Consensus 515 ~~~~ 518 (521)
..+-
T Consensus 587 ~~en 590 (752)
T KOG0670|consen 587 ASEN 590 (752)
T ss_pred cccc
Confidence 6543
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=8e-15 Score=134.77 Aligned_cols=138 Identities=25% Similarity=0.435 Sum_probs=117.5
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
.+|.+...|+.|+|++.+.. +++|++.. .++.....++|..|...|+-+.||||+.++|.|.++. ...++..||+
T Consensus 196 tkl~e~hsgelwrgrwqgnd-ivakil~v--r~~t~risrdfneefp~lrifshpnilpvlgacnspp--nlv~isq~mp 270 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQGND-IVAKILNV--REVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP--NLVIISQYMP 270 (448)
T ss_pred hhhccCCCcccccccccCcc-hhhhhhhh--hhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC--CceEeeeecc
Confidence 57889999999999997644 55666644 3344555678999999999999999999999998875 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeC
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~ 507 (521)
.|+|+..+|+.....++..+.++++.++|+|++|||+- .|-|.---|.+..|++|++.++||+
T Consensus 271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris 333 (448)
T KOG0195|consen 271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS 333 (448)
T ss_pred chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee
Confidence 99999999987777789999999999999999999985 4445555799999999999999886
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.3e-15 Score=145.27 Aligned_cols=166 Identities=31% Similarity=0.420 Sum_probs=79.0
Q ss_pred EEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccccc
Q 009972 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (521)
Q Consensus 74 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (521)
.++.+.|.+.. +|++++.+..|+.|+..+|+++ ..|+.+..+.+|..|++.+|++. .+|+..-+++.|++||..+|.
T Consensus 118 ~l~~s~n~~~e-l~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~ 194 (565)
T KOG0472|consen 118 KLDCSSNELKE-LPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNL 194 (565)
T ss_pred hhhccccceee-cCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhh
Confidence 33334444333 3333444444444444444444 33444444444444444444444 222222234455555555555
Q ss_pred CCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCc---------------------ccccccccccccCCCCC----cc
Q 009972 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG---------------------YTANIHGMYASSANLTG----LC 208 (521)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~---------------------~~~~l~~l~l~~n~l~~----~~ 208 (521)
++ .+|+.++.+.+|..|||..|++. .+|+..... -...+..+++..|++++ ++
T Consensus 195 L~-tlP~~lg~l~~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde~c 272 (565)
T KOG0472|consen 195 LE-TLPPELGGLESLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEIC 272 (565)
T ss_pred hh-cCChhhcchhhhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchHHH
Confidence 54 55556666666666666666655 444321110 01234445566666553 34
Q ss_pred cCCCCCEEeccCCccccCCccccccC--CCcccCCCccC
Q 009972 209 HLSQLKVADFSYNFFVGSIPKCLEYL--PSTSFQGNCLQ 245 (521)
Q Consensus 209 ~l~~L~~L~ls~N~l~g~ip~~l~~l--~~l~~~~N~l~ 245 (521)
-+.+|+.||+|+|.++ .+|..++++ ..+.+.||++.
T Consensus 273 lLrsL~rLDlSNN~is-~Lp~sLgnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDIS-SLPYSLGNLHLKFLALEGNPLR 310 (565)
T ss_pred HhhhhhhhcccCCccc-cCCcccccceeeehhhcCCchH
Confidence 4566666666666666 455555543 34555666544
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.6e-13 Score=148.20 Aligned_cols=138 Identities=16% Similarity=0.152 Sum_probs=104.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC---CCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
..||+|+||+||+|...+|+.||+|.=.... .|. |.--..++.+|+ -+-|+.+...+.-.+ ..+||+|
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~-~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~--~S~lv~e 774 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPN-PWE------FYICLQVMERLKPQMLPSIMHISSAHVFQN--ASVLVSE 774 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCC-cee------eeehHHHHHhhchhhhcchHHHHHHHccCC--cceeeee
Confidence 6899999999999999999999999753322 121 111122233333 233455555444444 5799999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-------CCCCeeeCCCchhh
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-------EDFSPKVSPLCLSF 513 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld-------~~~~~kl~DfGla~ 513 (521)
|.+.|+|.+++. ....++|.....++.++++-++.||.. +|||+||||+|.||. +..-++|+|||-+-
T Consensus 775 y~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 775 YSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred ccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 999999999996 334689999999999999999999999 999999999999994 23468999999875
Q ss_pred hc
Q 009972 514 LL 515 (521)
Q Consensus 514 ~~ 515 (521)
-|
T Consensus 850 Dm 851 (974)
T KOG1166|consen 850 DM 851 (974)
T ss_pred ee
Confidence 43
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.3e-13 Score=144.85 Aligned_cols=163 Identities=25% Similarity=0.374 Sum_probs=87.0
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.|+|++|.|+. +|..+. ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|+|+
T Consensus 200 ~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls 270 (754)
T PRK15370 200 QITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLF 270 (754)
T ss_pred CCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECc
Confidence 34555555555553 333332 35666666666665 3444332 35666666666665 5555543 467777777
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCC-----------------cccccccccccccCCCCCccc--CC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS-----------------GYTANIHGMYASSANLTGLCH--LS 211 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-----------------~~~~~l~~l~l~~n~l~~~~~--l~ 211 (521)
+|+|+ .+|..+. ++|+.|+|++|+|+ .+|..... ....++..++++.|.++.+.. .+
T Consensus 271 ~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~LP~~l~~ 346 (754)
T PRK15370 271 HNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALTSLPASLPP 346 (754)
T ss_pred CCccC-ccccccC--CCCcEEECCCCccc-cCcccchhhHHHHHhcCCccccCCccccccceeccccCCccccCChhhcC
Confidence 77777 4665553 46777777777776 34432110 011233444444444443321 13
Q ss_pred CCCEEeccCCccccCCcccc-ccCCCcccCCCccCCC
Q 009972 212 QLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 212 ~L~~L~ls~N~l~g~ip~~l-~~l~~l~~~~N~l~~~ 247 (521)
+|+.|++++|+|+ .+|..+ ..|..|++++|.+...
T Consensus 347 sL~~L~Ls~N~L~-~LP~~lp~~L~~LdLs~N~Lt~L 382 (754)
T PRK15370 347 ELQVLDVSKNQIT-VLPETLPPTITTLDVSRNALTNL 382 (754)
T ss_pred cccEEECCCCCCC-cCChhhcCCcCEEECCCCcCCCC
Confidence 5666666666665 344332 3556666666665543
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-12 Score=141.93 Aligned_cols=132 Identities=30% Similarity=0.377 Sum_probs=73.6
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|++++|+|+. +|. .+++|++|+|++|+|+. +|.. .++|+.|+|++|.|+ .+|..+ ++|+.|+|+
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~Ls 290 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWIF 290 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhch---hhcCEEECc
Confidence 46667777777665 343 24667777777777763 4432 345666666666665 344322 456666777
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCC-CCCEEeccCCccc
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS-QLKVADFSYNFFV 224 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~-~L~~L~ls~N~l~ 224 (521)
+|+++ .+|.. +++|+.|+|++|+|++ +|... ..+..+++++|.++++..++ +|+.|+|++|+|+
T Consensus 291 ~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp-----~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls 355 (788)
T PRK15387 291 GNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP-----SELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLA 355 (788)
T ss_pred CCccc-ccccc---ccccceeECCCCcccc-CCCCc-----ccccccccccCccccccccccccceEecCCCccC
Confidence 77776 45542 3567788888887774 44311 22334444555554443322 4555555555554
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.2e-14 Score=135.34 Aligned_cols=179 Identities=20% Similarity=0.225 Sum_probs=123.4
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccC-CCCCCCCCcccCCCcCCceE
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVKI 147 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L 147 (521)
+...+.|+|..|.|+...|..|+.+.+|+.|||++|+|+.+-|+.|.++++|..|-+.+ |+|+...-..|++|..|+.|
T Consensus 66 P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 66 PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRL 145 (498)
T ss_pred CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHH
Confidence 34678999999999998889999999999999999999999999999999988776655 88884333445444444444
Q ss_pred ecccccCCCCCch-------------------------------------------------------------------
Q 009972 148 NLQSNGLTGRLPA------------------------------------------------------------------- 160 (521)
Q Consensus 148 ~Ls~N~l~g~~p~------------------------------------------------------------------- 160 (521)
.+.-|++.-...+
T Consensus 146 llNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc 225 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARC 225 (498)
T ss_pred hcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccccee
Confidence 3333332211111
Q ss_pred -------------------------------------------hhhCCCCCCEEeCCCCcCCccCCCCCCCccccccccc
Q 009972 161 -------------------------------------------ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGM 197 (521)
Q Consensus 161 -------------------------------------------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l 197 (521)
.|..|++|+.|+|++|++++.-+..+.. ...++++
T Consensus 226 ~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~--~a~l~eL 303 (498)
T KOG4237|consen 226 VSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEG--AAELQEL 303 (498)
T ss_pred cchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcc--hhhhhhh
Confidence 2556666777777777776433322211 2345566
Q ss_pred ccccCCCCC-----cccCCCCCEEeccCCccccCCccccc---cCCCcccCCCccCCCCC
Q 009972 198 YASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 198 ~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~~~~ 249 (521)
++..|++.. |..++.|+.|+|.+|+++..-|..|. .+..+.+-+|+|.+.|-
T Consensus 304 ~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 304 YLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCR 363 (498)
T ss_pred hcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccc
Confidence 666666643 45678888899999998877776664 45667788888887663
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.8e-13 Score=145.12 Aligned_cols=162 Identities=23% Similarity=0.298 Sum_probs=109.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.|+. +|..+. .+|+.|+|++|++. .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|
T Consensus 220 ~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~L 290 (754)
T PRK15370 220 GNIKTLYANSNQLTS-IPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSV 290 (754)
T ss_pred cCCCEEECCCCcccc-CChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEEC
Confidence 367788888888875 455443 35777777777776 4565543 46777777777776 4565543 36666666
Q ss_pred ccccCCCCCchhhh-------------------CCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCccc-
Q 009972 150 QSNGLTGRLPAELG-------------------NLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH- 209 (521)
Q Consensus 150 s~N~l~g~~p~~~~-------------------~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~- 209 (521)
++|+|++ +|..+. -.++|+.|++++|.++ .+|... ...+..+++++|+++.+..
T Consensus 291 s~N~Lt~-LP~~lp~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt-~LP~~l----~~sL~~L~Ls~N~L~~LP~~ 364 (754)
T PRK15370 291 YDNSIRT-LPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALT-SLPASL----PPELQVLDVSKNQITVLPET 364 (754)
T ss_pred CCCcccc-CcccchhhHHHHHhcCCccccCCccccccceeccccCCccc-cCChhh----cCcccEEECCCCCCCcCChh
Confidence 6666663 333221 1246777777777776 355432 2478889999999886542
Q ss_pred -CCCCCEEeccCCccccCCcccc-ccCCCcccCCCccCCC
Q 009972 210 -LSQLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 210 -l~~L~~L~ls~N~l~g~ip~~l-~~l~~l~~~~N~l~~~ 247 (521)
.++|+.|++++|+|+ .+|..+ ..+..+++++|++..+
T Consensus 365 lp~~L~~LdLs~N~Lt-~LP~~l~~sL~~LdLs~N~L~~L 403 (754)
T PRK15370 365 LPPTITTLDVSRNALT-NLPENLPAALQIMQASRNNLVRL 403 (754)
T ss_pred hcCCcCEEECCCCcCC-CCCHhHHHHHHHHhhccCCcccC
Confidence 368999999999999 677655 4688899999988764
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.40 E-value=7e-15 Score=142.00 Aligned_cols=145 Identities=28% Similarity=0.378 Sum_probs=114.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
++..+++.+|.++...|..+. ++.|++||...|-+. .+|..++.|.+|.-|||..|.+. .+| +|.++..|+.|+++
T Consensus 161 ~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g 236 (565)
T KOG0472|consen 161 KLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVG 236 (565)
T ss_pred HHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhc
Confidence 355666777777664444343 777888888877776 67788888888888888888887 667 78888888888888
Q ss_pred cccCCCCCchhhh-CCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc----ccCCCCCEEeccCCccc
Q 009972 151 SNGLTGRLPAELG-NLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 151 ~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~----~~l~~L~~L~ls~N~l~ 224 (521)
.|++. .+|.+.+ .+++|..|||..|+++ ..|+..+. ..++..+++|+|.++++ .++ .|+.|-+-+|.+.
T Consensus 237 ~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl--LrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 237 ENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL--LRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred ccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHH--hhhhhhhcccCCccccCCcccccc-eeeehhhcCCchH
Confidence 88888 7888776 8999999999999998 88887654 34688899999999875 456 7888899999885
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.6e-12 Score=141.13 Aligned_cols=164 Identities=28% Similarity=0.290 Sum_probs=86.4
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccC-----------------CCCCCcEEEccCCCCC
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELG-----------------LLKRLKILDLGTNQLT 131 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----------------~l~~L~~L~Ls~N~l~ 131 (521)
..+++.|+|++|+|+. +|.. .++|+.|+|++|.|+. +|..+. .+++|+.|+|++|+|+
T Consensus 241 p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~~-Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~ 315 (788)
T PRK15387 241 PPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLTH-LPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLA 315 (788)
T ss_pred CCCCcEEEecCCccCc-ccCc---ccccceeeccCCchhh-hhhchhhcCEEECcCCccccccccccccceeECCCCccc
Confidence 3578999999999986 4532 3455566666665552 332110 1245666666666665
Q ss_pred CCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCC---------------cccccccc
Q 009972 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS---------------GYTANIHG 196 (521)
Q Consensus 132 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~---------------~~~~~l~~ 196 (521)
+ +|... .+|+.|++++|+|+ .+|.. ..+|++|+|++|+|+ .+|..... .....+..
T Consensus 316 ~-Lp~lp---~~L~~L~Ls~N~L~-~LP~l---p~~Lq~LdLS~N~Ls-~LP~lp~~L~~L~Ls~N~L~~LP~l~~~L~~ 386 (788)
T PRK15387 316 S-LPALP---SELCKLWAYNNQLT-SLPTL---PSGLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLTSLPALPSGLKE 386 (788)
T ss_pred c-CCCCc---ccccccccccCccc-ccccc---ccccceEecCCCccC-CCCCCCcccceehhhccccccCcccccccce
Confidence 3 33311 12333444444443 23321 135666777777666 34431100 00123455
Q ss_pred cccccCCCCCccc-CCCCCEEeccCCccccCCccccccCCCcccCCCccCCC
Q 009972 197 MYASSANLTGLCH-LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 197 l~l~~n~l~~~~~-l~~L~~L~ls~N~l~g~ip~~l~~l~~l~~~~N~l~~~ 247 (521)
+++++|.++++.. .++|+.|++++|+|+ .+|....+|..+++++|+++.+
T Consensus 387 LdLs~N~Lt~LP~l~s~L~~LdLS~N~Ls-sIP~l~~~L~~L~Ls~NqLt~L 437 (788)
T PRK15387 387 LIVSGNRLTSLPVLPSELKELMVSGNRLT-SLPMLPSGLLSLSVYRNQLTRL 437 (788)
T ss_pred EEecCCcccCCCCcccCCCEEEccCCcCC-CCCcchhhhhhhhhccCccccc
Confidence 5666666655432 245666666666666 3665555666667777766643
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.7e-12 Score=136.06 Aligned_cols=146 Identities=10% Similarity=0.040 Sum_probs=92.5
Q ss_pred hhhCcCCCeeEEEEEeCC-CCEEEEEEeeeecccc-------------------------c-----hhhHH------HHH
Q 009972 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHW-------------------------T-----GYLEL------YFQ 406 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~-------------------------~-----~~~~~------~~~ 406 (521)
+.||.|++|.||+|++++ |+.||||......... + .+..+ +|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 579999999999999987 9999999985432100 0 01111 245
Q ss_pred HHHHHHhccC----CCccceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHH-HHHHhcC
Q 009972 407 REVADLARIN----HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG-LKYLHTE 481 (521)
Q Consensus 407 ~E~~~l~~l~----H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~g-L~yLH~~ 481 (521)
+|...+.+++ +.+.+.+-..+.+-.. ..+|||||++++.+.++-..... ..+ +..++...++. +.-++..
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st-~~VLvmE~i~G~~l~d~~~l~~~-g~d---~~~la~~~v~~~~~Qif~~ 279 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCS-ETVMVMERMYGIPVSDVAALRAA-GTD---MKLLAERGVEVFFTQVFRD 279 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCC-CceEEEeeecCccHHhHHHHHhc-CCC---HHHHHHHHHHHHHHHHHhC
Confidence 5555444442 4444444444433211 57899999999999875321111 111 22233222221 2223345
Q ss_pred CCCCeeecCCCCCCeeecCCC----CeeeCCCchhhhccc
Q 009972 482 LGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLVS 517 (521)
Q Consensus 482 ~~~~ivH~dlk~~NILld~~~----~~kl~DfGla~~~~~ 517 (521)
+++|+|++|.||+++.++ .+++.|||++..+++
T Consensus 280 ---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 280 ---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 999999999999999888 999999999887654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.3e-13 Score=149.12 Aligned_cols=96 Identities=16% Similarity=0.181 Sum_probs=75.9
Q ss_pred ccCC-CccceeeeEeecCC-----CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 009972 414 RINH-ENTGKLLGYCRESS-----PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFT 487 (521)
Q Consensus 414 ~l~H-~niv~l~g~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 487 (521)
.++| +||.++++++.... ....+.++||++. +|++++... ...+++.++..|+.||++||+|||+. +|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDV-SLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCc-cHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 3456 68888888872211 1146788898854 999999743 34599999999999999999999999 999
Q ss_pred ecCCCCCCeeec-------------------CCCCeeeCCCchhhh
Q 009972 488 ISELNSSAVYLT-------------------EDFSPKVSPLCLSFL 514 (521)
Q Consensus 488 H~dlk~~NILld-------------------~~~~~kl~DfGla~~ 514 (521)
||||||+||||+ .++.+|++|||+++.
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~ 148 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRR 148 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccc
Confidence 999999999994 355677888888764
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.7e-12 Score=114.38 Aligned_cols=131 Identities=15% Similarity=0.062 Sum_probs=95.0
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccc-eeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG-KLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.++.|.++.||+++.. +..+++|....... ....+.+|+.++..+.+.+++ +++.+.. . ..++||||+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~--~~~lv~e~i 73 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYFDP--E--TGVLITEFI 73 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEEeC--C--CCeEEEEec
Confidence 35788999999999875 66799987632211 122467899999988766654 4444332 2 357999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL--GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++.++.+.- . ....++.+++++|+.||+.. .+.++|+|++|.||+++ ++.+++.|||.+..-
T Consensus 74 ~G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~ 137 (170)
T cd05151 74 EGSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN 137 (170)
T ss_pred CCCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC
Confidence 998776430 1 12345689999999999872 22369999999999999 668999999998753
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-13 Score=144.89 Aligned_cols=173 Identities=32% Similarity=0.396 Sum_probs=96.2
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccc----------------------cCCcccCCCCCCcEEEcc
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG----------------------IIPKELGLLKRLKILDLG 126 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~----------------------~~p~~~~~l~~L~~L~Ls 126 (521)
+..++.+++++|++++ +|+.++.+.+|+.|+..+|+|.. .+|.....++.|++|||.
T Consensus 240 p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred cccceeeecchhhhhc-chHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeeh
Confidence 3456666666666665 34566666666666666665531 244555556667777777
Q ss_pred CCCCCCCCCcccC--------------------------CCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCc
Q 009972 127 TNQLTGPIPPEIG--------------------------NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 127 ~N~l~g~~p~~~~--------------------------~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
.|+|. .+|+.+- .++.|+.|+|.+|.|+...-+.+-+..+|+.|+|++|+|+
T Consensus 319 ~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~- 396 (1081)
T KOG0618|consen 319 SNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN- 396 (1081)
T ss_pred hcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-
Confidence 77665 4443210 1112333444444444333333444455555555555554
Q ss_pred cCCCCCCCcc----------------------cccccccccccCCCCCc---ccCCCCCEEeccCCccc-cCCcccc--c
Q 009972 181 AVPAGSNSGY----------------------TANIHGMYASSANLTGL---CHLSQLKVADFSYNFFV-GSIPKCL--E 232 (521)
Q Consensus 181 ~~p~~~~~~~----------------------~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~-g~ip~~l--~ 232 (521)
.+|+.....+ ...++.+...+|++..+ ..+++|+.+|+|.|+|+ +.+|... .
T Consensus 397 ~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fPe~~~l~qL~~lDlS~N~L~~~~l~~~~p~p 476 (1081)
T KOG0618|consen 397 SFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFPELAQLPQLKVLDLSCNNLSEVTLPEALPSP 476 (1081)
T ss_pred cCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeechhhhhcCcceEEecccchhhhhhhhhhCCCc
Confidence 4444322211 12344445555554433 34788999999999996 3456544 5
Q ss_pred cCCCcccCCCcc
Q 009972 233 YLPSTSFQGNCL 244 (521)
Q Consensus 233 ~l~~l~~~~N~l 244 (521)
+|+.|+++||..
T Consensus 477 ~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 477 NLKYLDLSGNTR 488 (1081)
T ss_pred ccceeeccCCcc
Confidence 899999999963
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.9e-11 Score=106.76 Aligned_cols=135 Identities=17% Similarity=0.193 Sum_probs=102.3
Q ss_pred hhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.+++|+-+.+|.+.+.+.. +.+|.=..|.... ..-...+..+|.+++.+++--.|....=|..+.. ...|+||
T Consensus 3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~--~~~I~me 79 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD--NGLIVME 79 (204)
T ss_pred hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCEEEEE
Confidence 5789999999999775544 4455433332111 1112456788999999997766666665666655 6789999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|+++-.|.+.+... +..++..|-.-+.-||.. +|+|+||+++||++..+. +.+.||||+++-
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 99998888888532 467888888889999999 999999999999997765 999999999863
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.6e-11 Score=108.15 Aligned_cols=139 Identities=12% Similarity=0.131 Sum_probs=97.6
Q ss_pred hhhCcCCCeeEEEEEeCC-------CCEEEEEEeeeecc------cc---c---------h----hhHHHHHHHHHHHhc
Q 009972 364 NIIGSSPDSLVYKGTMKG-------GPEIAVISLCIKEE------HW---T---------G----YLELYFQREVADLAR 414 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-------~~~vavk~~~~~~~------~~---~---------~----~~~~~~~~E~~~l~~ 414 (521)
..||.|.-+.||.|...+ +..+|||....... .+ + . .......+|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999998653 47899998743210 00 0 0 111234489999999
Q ss_pred cCC--CccceeeeEeecCCCCceEEEEeeCCCCChhh-hhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeeecC
Q 009972 415 INH--ENTGKLLGYCRESSPFTRMLVFDYASNGTLYE-HLHYGERCQVSWTRRMKIVIGIARGLKYL-HTELGPPFTISE 490 (521)
Q Consensus 415 l~H--~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~-~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~d 490 (521)
+.. -++.+++++ . ..++||||+.++.+.. .++. ..++..+...+..+++.+|.++ |.. ++||||
T Consensus 83 l~~~Gv~vP~pi~~--~----~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL--K----KHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe--c----CCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 854 455566654 2 4589999998754422 2221 1244556677889999999999 677 999999
Q ss_pred CCCCCeeecCCCCeeeCCCchhhhc
Q 009972 491 LNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 491 lk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|++.||+++ ++.++|+|||.|-..
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999997 467999999987544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=4e-11 Score=105.26 Aligned_cols=145 Identities=13% Similarity=0.118 Sum_probs=105.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEE-Eeeeeccc---cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVI-SLCIKEEH---WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk-~~~~~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
.++.+|+-+.|+++.+.+. ...|| ++.++... ...-.+++..+|.+.+.+++--.|.-..-++.+.. .-.|+|
T Consensus 13 ~likQGAEArv~~~~~~Ge-~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~--~~~i~M 89 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFSGE-AAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY--GGQIYM 89 (229)
T ss_pred eeeeccceeeEeeeccCCc-eeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC--CCeEEE
Confidence 5788999999999998654 44444 33322211 11224567889999999997767766666666655 457999
Q ss_pred eeCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeeeCCCchhhh
Q 009972 440 DYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKVSPLCLSFL 514 (521)
Q Consensus 440 ey~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~---~~kl~DfGla~~ 514 (521)
||+++ -++.+++......+-........+..|-+.+.-||.. .|+|+||.++||+|.+++ .+.+.|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 4788888644333333333478899999999999999 999999999999996554 468999999764
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.5e-12 Score=135.57 Aligned_cols=144 Identities=14% Similarity=0.157 Sum_probs=110.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeee--ccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~--~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.++|.|++|.|+..... .....+.|....+ ...........+..|+.+-..++|+|++..+..+.+.. ...-+||
T Consensus 324 ~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~--~~~~~mE 401 (601)
T KOG0590|consen 324 RVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID--GILQSME 401 (601)
T ss_pred ceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc--cchhhhh
Confidence 78999999977777654 3333444433211 11111222223667888888999999998888776655 3444599
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|+++ +|+.++.... .++-.++-.+..|+..|+.|+|+. +|.|||+|++|++++.++.+||+|||.+..+
T Consensus 402 ~~~~-Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf 470 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVF 470 (601)
T ss_pred cccH-HHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceee
Confidence 9999 9999996442 378888999999999999999999 9999999999999999999999999998764
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1e-12 Score=139.14 Aligned_cols=173 Identities=28% Similarity=0.375 Sum_probs=139.4
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+.++|.++...+ -..-.+|+++++++|+++ .+|+.++.+.+|+.|+..+|+|+ .+|..+..+++|+.|.
T Consensus 218 g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~ 293 (1081)
T KOG0618|consen 218 GPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLS 293 (1081)
T ss_pred CcchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHH
Confidence 3578888889999884322 234578999999999999 47799999999999999999997 8999999999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcc------------------------cccccccccccCCC
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY------------------------TANIHGMYASSANL 204 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~------------------------~~~l~~l~l~~n~l 204 (521)
+..|.++ .+|+....+++|++|+|..|+|. .+|+...... ...+..+++.+|.+
T Consensus 294 ~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~L 371 (1081)
T KOG0618|consen 294 AAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHL 371 (1081)
T ss_pred hhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcc
Confidence 9999999 78888899999999999999997 6665322110 11344567777777
Q ss_pred CC-----cccCCCCCEEeccCCccccCCccc----cccCCCcccCCCccCCCC
Q 009972 205 TG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 205 ~~-----~~~l~~L~~L~ls~N~l~g~ip~~----l~~l~~l~~~~N~l~~~~ 248 (521)
+. +..+.+|+.|+|+||+|. .+|.. ++.|+.|.++||.++.+.
T Consensus 372 td~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~~Lp 423 (1081)
T KOG0618|consen 372 TDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLTTLP 423 (1081)
T ss_pred cccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhhhhh
Confidence 64 456789999999999998 77753 466778999999887653
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.1e-12 Score=127.92 Aligned_cols=179 Identities=25% Similarity=0.259 Sum_probs=130.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCC---CCEEEcCCCcccc----cCCcccCCC-CCCcEEEccCCCCCCC----CCc
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTY---LQELILHGNNLIG----IIPKELGLL-KRLKILDLGTNQLTGP----IPP 136 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~g~----~p~ 136 (521)
..+++.|++++|.+.+..+..+..+.. |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 458999999999998777777766666 9999999999873 334456677 8999999999999843 344
Q ss_pred ccCCCcCCceEecccccCCCC----CchhhhCCCCCCEEeCCCCcCCccCCCCC--CCcccccccccccccCCCCCc---
Q 009972 137 EIGNLTGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQGAVPAGS--NSGYTANIHGMYASSANLTGL--- 207 (521)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~~~~~~l~~l~l~~n~l~~~--- 207 (521)
.+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++.-.... .......+..+++++|.++..
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 566778999999999999842 44556677899999999999874322110 001124688889999988741
Q ss_pred --c-----cCCCCCEEeccCCcccc----CCccc---cccCCCcccCCCccCCC
Q 009972 208 --C-----HLSQLKVADFSYNFFVG----SIPKC---LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 208 --~-----~l~~L~~L~ls~N~l~g----~ip~~---l~~l~~l~~~~N~l~~~ 247 (521)
. ..++|+.|++++|.++. .++.. +.++..+++++|.+...
T Consensus 240 ~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 240 ALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 1 13789999999999862 12222 35678889999987754
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.9e-12 Score=127.22 Aligned_cols=177 Identities=25% Similarity=0.180 Sum_probs=126.1
Q ss_pred CCEEEEEecCCCCcc------cCCccccCCCCCCEEEcCCCcccccCCcccCCCCC---CcEEEccCCCCCC----CCCc
Q 009972 70 DRVLKINISGSSLKG------FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKR---LKILDLGTNQLTG----PIPP 136 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~------~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~g----~~p~ 136 (521)
..++.|+++++.+.+ .++..+..+++|+.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+..
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~ 130 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAK 130 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHH
Confidence 458889999888863 34456778889999999999998666666655555 9999999999873 2334
Q ss_pred ccCCC-cCCceEecccccCCCC----CchhhhCCCCCCEEeCCCCcCCccCCCCCCC--cccccccccccccCCCCC---
Q 009972 137 EIGNL-TGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQGAVPAGSNS--GYTANIHGMYASSANLTG--- 206 (521)
Q Consensus 137 ~~~~l-~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--~~~~~l~~l~l~~n~l~~--- 206 (521)
.+..+ ++|+.|+|++|.+++. ++..+..+++|++|++++|.+++........ ....++..+++++|.+++
T Consensus 131 ~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 210 (319)
T cd00116 131 GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA 210 (319)
T ss_pred HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH
Confidence 55666 8899999999999843 3445667788999999999988421110000 001367888888888753
Q ss_pred ------cccCCCCCEEeccCCccccCCc----cc----cccCCCcccCCCccCC
Q 009972 207 ------LCHLSQLKVADFSYNFFVGSIP----KC----LEYLPSTSFQGNCLQN 246 (521)
Q Consensus 207 ------~~~l~~L~~L~ls~N~l~g~ip----~~----l~~l~~l~~~~N~l~~ 246 (521)
+..+++|++|++++|.+++..+ .. ...+..+++.+|.+..
T Consensus 211 ~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~ 264 (319)
T cd00116 211 SALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITD 264 (319)
T ss_pred HHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCc
Confidence 3457789999999999875222 12 2577888898887763
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.8e-13 Score=134.75 Aligned_cols=164 Identities=29% Similarity=0.431 Sum_probs=81.8
Q ss_pred EEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccc
Q 009972 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
.+..||+.|++.. +|.++..+..|+.|.|..|.+. .+|..+.++..|++|||+.|+++ .+|..+..|+ |+.|-+++
T Consensus 77 t~~aDlsrNR~~e-lp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFSE-LPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred hhhhhcccccccc-CchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEec
Confidence 3456677777654 4555555555555555555555 45555555555555555555555 4555554442 55555555
Q ss_pred ccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc----ccCCCCCEEeccCCccccCC
Q 009972 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~----~~l~~L~~L~ls~N~l~g~i 227 (521)
|+++ .+|+.++.+..|..||.+.|.+. .+|+.... ...+..+.+..|++..+ +.| .|..||+|.|+++ .|
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~--l~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGY--LTSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKIS-YL 226 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhh--HHHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCcee-ec
Confidence 5555 45555555555555555555554 33332111 12233334444443322 212 2455555666555 55
Q ss_pred ccccccC---CCcccCCCccC
Q 009972 228 PKCLEYL---PSTSFQGNCLQ 245 (521)
Q Consensus 228 p~~l~~l---~~l~~~~N~l~ 245 (521)
|-+|.+| ..+.+..|+++
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred chhhhhhhhheeeeeccCCCC
Confidence 5554333 33445555444
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=135.21 Aligned_cols=110 Identities=26% Similarity=0.347 Sum_probs=63.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.+.. ++..+..+++|+.|+|++|...+.+|. +..+++|+.|+|++|.....+|..++++++|+.|+++
T Consensus 612 ~L~~L~L~~s~l~~-L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~ 689 (1153)
T PLN03210 612 NLVKLQMQGSKLEK-LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMS 689 (1153)
T ss_pred CCcEEECcCccccc-cccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCC
Confidence 45566666666543 455556666666666666544445553 5566666666666665445666666666666666666
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
+|..-+.+|..+ ++++|+.|++++|...+.+|
T Consensus 690 ~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p 721 (1153)
T PLN03210 690 RCENLEILPTGI-NLKSLYRLNLSGCSRLKSFP 721 (1153)
T ss_pred CCCCcCccCCcC-CCCCCCEEeCCCCCCccccc
Confidence 654333555544 45556666555554333333
|
syringae 6; Provisional |
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.4e-10 Score=107.84 Aligned_cols=147 Identities=18% Similarity=0.116 Sum_probs=111.1
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC--CccceeeeEeecCC-CCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESS-PFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~-~~~~~lv~e 440 (521)
+.++.|.++.||++...+|..+++|........ .....+.+|.+++..+++ .++.+++.+..... ....++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~---~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL---PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC---cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 458899999999999877788999986432211 123468899999999976 34567777765432 014589999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------------------------------------- 482 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 482 (521)
|++++++.+.+.. ..++..++..++.+++++|++||+..
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999888876532 24788888899999999999999531
Q ss_pred ---------------CCCeeecCCCCCCeeecC--CCCeeeCCCchhhhcc
Q 009972 483 ---------------GPPFTISELNSSAVYLTE--DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 483 ---------------~~~ivH~dlk~~NILld~--~~~~kl~DfGla~~~~ 516 (521)
...++|+|+.|.||++++ ++.+.|.||+.+..-.
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~ 208 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGD 208 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCC
Confidence 245799999999999998 6678999999887543
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.6e-10 Score=134.19 Aligned_cols=115 Identities=23% Similarity=0.387 Sum_probs=79.8
Q ss_pred ccceeeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccC
Q 009972 60 WTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG 139 (521)
Q Consensus 60 w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 139 (521)
|.|+.+ ..+++.|+|+++...+.+| .++.+++|++|+|++|.....+|..+.++++|+.|++++|..-+.+|..+
T Consensus 627 ~~~~~~---l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i- 701 (1153)
T PLN03210 627 WDGVHS---LTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI- 701 (1153)
T ss_pred cccccc---CCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-
Confidence 566543 3578888998876555565 47888888888888887666788888888888888888865445777665
Q ss_pred CCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCC
Q 009972 140 NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
++++|+.|+|++|...+.+|.. .++|++|+|++|.+. .+|
T Consensus 702 ~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP 741 (1153)
T PLN03210 702 NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFP 741 (1153)
T ss_pred CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-ccc
Confidence 6777777777776554455532 345666666666654 344
|
syringae 6; Provisional |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.9e-10 Score=110.92 Aligned_cols=148 Identities=17% Similarity=0.169 Sum_probs=97.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC----------CccceeeeEeecC-C
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH----------ENTGKLLGYCRES-S 431 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H----------~niv~l~g~~~~~-~ 431 (521)
..||.|+++.||.+++. +++++|+|...... .......+++.+|.-....+.+ -.++-.++...-. +
T Consensus 18 ~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 18 RIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred cccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 68999999999999997 58999999986655 3333445667777755555332 2222222222111 0
Q ss_pred -------C--C-----ceEEEEeeCCCCChhhhhh---cCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 009972 432 -------P--F-----TRMLVFDYASNGTLYEHLH---YGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (521)
Q Consensus 432 -------~--~-----~~~lv~ey~~~g~L~~~l~---~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk 492 (521)
. . ..+++|+-+. +||.+++. ... ...+....|..+..|+.+.+++||+. ++||+|||
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi~ 172 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDIK 172 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-S
T ss_pred CcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecccc
Confidence 0 0 1366777775 48888764 111 12355667788889999999999999 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhcc
Q 009972 493 SSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 493 ~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+|++++++|.++|+||+......
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g 196 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAG 196 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETT
T ss_pred eeeEEEcCCCCEEEcChHHHeecC
Confidence 999999999999999998765443
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.6e-12 Score=129.52 Aligned_cols=147 Identities=28% Similarity=0.404 Sum_probs=128.4
Q ss_pred EEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccc
Q 009972 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
|..+.|..|.+.- +|+.+.+|..|+.|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|+.++.+..|..||.+.
T Consensus 100 Le~liLy~n~~r~-ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~ 175 (722)
T KOG0532|consen 100 LESLILYHNCIRT-IPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSK 175 (722)
T ss_pred HHHHHHHhcccee-cchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhh
Confidence 5667788888864 8899999999999999999998 7888888886 999999999998 8999999999999999999
Q ss_pred ccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC----cccCCCCCEEeccCCccccCC
Q 009972 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~----~~~l~~L~~L~ls~N~l~g~i 227 (521)
|.+. .+|..++++.+|+.|.+..|++. .+|...+. ..|..++++.|+++. |.+|+.|++|-|.+|.|. +.
T Consensus 176 nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~---LpLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLq-SP 249 (722)
T KOG0532|consen 176 NEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS---LPLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQ-SP 249 (722)
T ss_pred hhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC---CceeeeecccCceeecchhhhhhhhheeeeeccCCCC-CC
Confidence 9998 79999999999999999999998 66765543 567889999999875 678999999999999997 44
Q ss_pred c
Q 009972 228 P 228 (521)
Q Consensus 228 p 228 (521)
|
T Consensus 250 P 250 (722)
T KOG0532|consen 250 P 250 (722)
T ss_pred h
Confidence 4
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.1e-10 Score=104.67 Aligned_cols=112 Identities=31% Similarity=0.476 Sum_probs=39.4
Q ss_pred cccCCCCCCEEEcCCCcccccCCcccC-CCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhh-hCCC
Q 009972 89 ELGLLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLI 166 (521)
Q Consensus 89 ~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~ 166 (521)
.+.+...+++|+|++|.|+. + +.++ .+.+|+.||||+|.|+ .++ .+..+++|+.|++++|+++ .+++.+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-T
T ss_pred cccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCC
Confidence 35566678889999998874 3 3455 5788899999999888 443 5778888999999999998 455445 4688
Q ss_pred CCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCcccc
Q 009972 167 SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 167 ~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g 225 (521)
+|++|+|++|++.. +. .+..+..+++|+.|++.+|.++.
T Consensus 89 ~L~~L~L~~N~I~~-l~-------------------~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 89 NLQELYLSNNKISD-LN-------------------ELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp T--EEE-TTS---S-CC-------------------CCGGGGG-TT--EEE-TT-GGGG
T ss_pred cCCEEECcCCcCCC-hH-------------------HhHHHHcCCCcceeeccCCcccc
Confidence 99999999998862 21 12335567888889998888873
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.8e-11 Score=124.24 Aligned_cols=144 Identities=17% Similarity=0.099 Sum_probs=116.1
Q ss_pred hhCcCCCeeEEEEEe----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEE
Q 009972 365 IIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++|+|.||.|+.++- +.|.-+|+|....+...... +.....|..++..++ ||.+|++.-.+..+. ..++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~--~~~t~~er~il~~~~~~~f~v~lhyafqt~~--kl~l~l 76 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRD--RTHTKQERIILAFVHNTPFLVKLHYAFQTDG--KLYLIL 76 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccc--ccccccHHHHHhhccCCCceeeeeeeecccc--chhHhh
Confidence 378999999987643 34677888887554422111 114566778888886 999999998888877 789999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|..+|++...+... ..++......+...++-+++++|.. +|+|||+|++||++|.+|++++.|||+.|...+
T Consensus 77 d~~rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~ 149 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK 149 (612)
T ss_pred hhcccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHh
Confidence 999999998887533 3467777778888999999999999 999999999999999999999999999997654
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.08 E-value=9.7e-11 Score=120.92 Aligned_cols=169 Identities=31% Similarity=0.488 Sum_probs=97.5
Q ss_pred CEEEEEecCCCCcccCCccccCCC-CCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 71 RVLKINISGSSLKGFLAPELGLLT-YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.++.|++.+|.++. +++....+. +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|...+.++.|+.|++
T Consensus 117 ~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 45666666666655 455555553 6666666666665 45555666666666666666666 55555556666666666
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCC----CcccCCCCCEEeccCCcccc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT----GLCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~----~~~~l~~L~~L~ls~N~l~g 225 (521)
++|+++ .+|..+..+..|++|.+++|.+. .++..... ..++..+.+..|.+. .+..+++++.|++++|+++
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~--~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~- 268 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSN--LKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQIS- 268 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhh--cccccccccCCceeeeccchhccccccceecccccccc-
Confidence 666666 56655555555666666666422 12211110 123344445555543 3445666777777777776
Q ss_pred CCcc--ccccCCCcccCCCccCCC
Q 009972 226 SIPK--CLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 226 ~ip~--~l~~l~~l~~~~N~l~~~ 247 (521)
.++. .+.++..+++++|.+...
T Consensus 269 ~i~~~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 269 SISSLGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred ccccccccCccCEEeccCcccccc
Confidence 3432 334556677777755543
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.9e-10 Score=111.64 Aligned_cols=90 Identities=22% Similarity=0.204 Sum_probs=72.5
Q ss_pred CCCccceeeeEeecCC-------------------------CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHH
Q 009972 416 NHENTGKLLGYCRESS-------------------------PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIG 470 (521)
Q Consensus 416 ~H~niv~l~g~~~~~~-------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ 470 (521)
+|||||+++++|.+.- +...|+||.-++. +|++++..+. .+...+.-|..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC---CchHHHHHHHHH
Confidence 6899998888775321 2257899998877 9999997443 456677788899
Q ss_pred HHHHHHHHhcCCCCCeeecCCCCCCeee--cCCCC--eeeCCCchh
Q 009972 471 IARGLKYLHTELGPPFTISELNSSAVYL--TEDFS--PKVSPLCLS 512 (521)
Q Consensus 471 ia~gL~yLH~~~~~~ivH~dlk~~NILl--d~~~~--~kl~DfGla 512 (521)
+.+|+.|||.+ +|.|||+|++|||+ |+|.. ..|+|||.+
T Consensus 350 lLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc 392 (598)
T KOG4158|consen 350 LLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCC 392 (598)
T ss_pred HHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEccccee
Confidence 99999999999 99999999999998 56654 679999964
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.1e-11 Score=128.56 Aligned_cols=142 Identities=13% Similarity=0.080 Sum_probs=112.1
Q ss_pred hhhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.+.+|+++|=+|.||+++.|. |+||.+.++....+-..-.+-.+|++ ...++|||.+++.-+-..+. ..|||-+|
T Consensus 27 ~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k--AAylvRqy 102 (1431)
T KOG1240|consen 27 YVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDK--AAYLVRQY 102 (1431)
T ss_pred eecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhH--HHHHHHHH
Confidence 3478999999999999998887 88888865543332222223334444 55669999999888776666 67899999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
+.+ +|+|.+..+ .-+...+..=|+.|+..|+.-+|.. +|.|||||.+||||+.-.=+.|+||.--|
T Consensus 103 vkh-nLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFK 168 (1431)
T KOG1240|consen 103 VKH-NLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFK 168 (1431)
T ss_pred Hhh-hhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccC
Confidence 988 999998533 2366677788999999999999999 99999999999999998889999997543
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=3e-10 Score=116.43 Aligned_cols=99 Identities=25% Similarity=0.494 Sum_probs=89.7
Q ss_pred HhccCCCccceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe-eecC
Q 009972 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPF-TISE 490 (521)
Q Consensus 412 l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i-vH~d 490 (521)
|+.+.|.|+.+++|.+.+.. ..++|.+|++.|+|.+.+.. ....++|.-...+.++++.||+|+|+. +| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~--~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP--EMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCC--ceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 35679999999999999886 89999999999999999974 344689999999999999999999987 55 9999
Q ss_pred CCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 491 LNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 491 lk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|+++|..+.+||+|||+..+..
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~ 100 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLE 100 (484)
T ss_pred eccccceeeeeEEEEechhhhccccc
Confidence 99999999999999999999988774
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.4e-10 Score=102.41 Aligned_cols=104 Identities=29% Similarity=0.417 Sum_probs=43.2
Q ss_pred CEEEEEecCCCCcccCCcccc-CCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCccc-CCCcCCceEe
Q 009972 71 RVLKINISGSSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~ 148 (521)
+++.|+|.+|.|+.. +.++ .+++|+.|+|++|.|+. ++ .+..++.|++|++++|+|+ .+++.+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 678999999999863 4566 68999999999999995 43 5888999999999999999 565555 4689999999
Q ss_pred cccccCCCCC-chhhhCCCCCCEEeCCCCcCC
Q 009972 149 LQSNGLTGRL-PAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 149 Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
|++|++...- -..+..+++|+.|+|.+|.++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 9999997421 145778999999999999987
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.8e-09 Score=96.27 Aligned_cols=129 Identities=15% Similarity=0.197 Sum_probs=84.1
Q ss_pred eEEEEEeCCCCEEEEEEeeeecc----------------------ccchhhHHHHHHHHHHHhccCCC--ccceeeeEee
Q 009972 373 LVYKGTMKGGPEIAVISLCIKEE----------------------HWTGYLELYFQREVADLARINHE--NTGKLLGYCR 428 (521)
Q Consensus 373 ~Vy~~~~~~~~~vavk~~~~~~~----------------------~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~ 428 (521)
.||.|...+|..+|+|+...... .+.........+|.+.|.++..- ++.+++.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999999999999998753311 01112345688999999999766 455665442
Q ss_pred cCCCCceEEEEeeCC--CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeeecCCCCCCeeecCCCCee
Q 009972 429 ESSPFTRMLVFDYAS--NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL-HTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~--~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~dlk~~NILld~~~~~k 505 (521)
..+|||||++ +..+..+.. .. ++......+..++...+..+ |.. +|+|+|+.+.||+++++ .+.
T Consensus 80 -----~~~ivME~I~~~G~~~~~l~~-~~---~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 -----RNVIVMEYIGEDGVPLPRLKD-VD---LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp -----TTEEEEE--EETTEEGGCHHH-CG---GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred -----CCEEEEEecCCCccchhhHHh-cc---ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3479999999 544443332 11 12344567778888866665 676 99999999999999988 999
Q ss_pred eCCCchhhhc
Q 009972 506 VSPLCLSFLL 515 (521)
Q Consensus 506 l~DfGla~~~ 515 (521)
|.|||.|...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999987643
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.6e-09 Score=99.56 Aligned_cols=147 Identities=10% Similarity=0.005 Sum_probs=101.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccc--cc-----hhhHHHHHHHHHHHhccCCCcc--ceeeeEeecCC---
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH--WT-----GYLELYFQREVADLARINHENT--GKLLGYCRESS--- 431 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~--~~-----~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~~--- 431 (521)
+++-.-....|++..+ +|+.+.||+....... .. ......+.+|...+.++...+| ..+++|.....
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444455778766 5678999976322200 00 0011247899999988854444 34466654321
Q ss_pred CCceEEEEeeCCCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-------CCC
Q 009972 432 PFTRMLVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-------DFS 503 (521)
Q Consensus 432 ~~~~~lv~ey~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-------~~~ 503 (521)
....++|+|++++- +|.+++......+.+...+..++.+++..++-||.. +|+|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 12478999999985 799888532222345667789999999999999999 9999999999999975 578
Q ss_pred eeeCCCchhhh
Q 009972 504 PKVSPLCLSFL 514 (521)
Q Consensus 504 ~kl~DfGla~~ 514 (521)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998754
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.95 E-value=5e-10 Score=82.56 Aligned_cols=59 Identities=36% Similarity=0.476 Sum_probs=26.9
Q ss_pred CCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccccc
Q 009972 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (521)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (521)
+|++|+|++|+++...+..|..+++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333444444444444444444443333444444444444444443
|
... |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1e-10 Score=109.52 Aligned_cols=123 Identities=24% Similarity=0.245 Sum_probs=62.7
Q ss_pred CCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccc
Q 009972 119 RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (521)
Q Consensus 119 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~ 198 (521)
.|+.||||+|.|+ .+.++..-++.++.|++|+|.+. .+ ..++.|++|+.||||+|.++ .+-.... ...++..+.
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~--KLGNIKtL~ 358 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECVGWHL--KLGNIKTLK 358 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhH-hhhhhHh--hhcCEeeee
Confidence 3445555555554 44444444455555555555554 22 12444555555555555444 1111110 112344444
Q ss_pred cccCCC---CCcccCCCCCEEeccCCccccCCc-cccccC---CCcccCCCccCCC
Q 009972 199 ASSANL---TGLCHLSQLKVADFSYNFFVGSIP-KCLEYL---PSTSFQGNCLQNK 247 (521)
Q Consensus 199 l~~n~l---~~~~~l~~L~~L~ls~N~l~g~ip-~~l~~l---~~l~~~~N~l~~~ 247 (521)
++.|.+ +|+..+-+|..||+++|++..--- ..++++ +.+.+.+|++...
T Consensus 359 La~N~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 359 LAQNKIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhhHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 555543 456667788999999998852111 234444 3567788877664
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.5e-10 Score=82.80 Aligned_cols=61 Identities=38% Similarity=0.508 Sum_probs=56.3
Q ss_pred CCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcC
Q 009972 118 KRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178 (521)
Q Consensus 118 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 178 (521)
++|++|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999966667899999999999999999987788999999999999999986
|
... |
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.9e-09 Score=73.00 Aligned_cols=41 Identities=41% Similarity=0.943 Sum_probs=31.0
Q ss_pred hhHHHHHHHHHHhhccCCCCCCCCCCCCC-CCCCCccceeeC
Q 009972 26 TNEFWALTTFKEAIYEDPHLVLSNWNALD-ADPCHWTGIACS 66 (521)
Q Consensus 26 ~~~~~~L~~~k~~~~~~~~~~l~~W~~~~-~~~c~w~gv~C~ 66 (521)
++|++||++||+++..+|...+.+|+... .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 57999999999999867777899998763 799999999995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-09 Score=113.07 Aligned_cols=153 Identities=29% Similarity=0.453 Sum_probs=128.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|++++|.+.. +|..+..+++|+.|++++|++. .+|...+.+++|+.|++++|+++ .+|..+..+..|+.|+++
T Consensus 141 nL~~L~l~~N~i~~-l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~ 217 (394)
T COG4886 141 NLKELDLSDNKIES-LPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLS 217 (394)
T ss_pred hcccccccccchhh-hhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhc
Confidence 79999999999986 5678999999999999999999 57776768999999999999999 888887778889999999
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCccccCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~i 227 (521)
+|.+. .++..+.++.++..|.+.+|++.. ++..... ...+..++++.|.++.+ ..+.+++.||+++|.+....
T Consensus 218 ~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~--l~~l~~L~~s~n~i~~i~~~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 218 NNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGN--LSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred CCcce-ecchhhhhcccccccccCCceeee-ccchhcc--ccccceeccccccccccccccccCccCEEeccCccccccc
Confidence 99755 577889999999999999999873 2332211 24588899999988764 46789999999999999766
Q ss_pred ccc
Q 009972 228 PKC 230 (521)
Q Consensus 228 p~~ 230 (521)
|..
T Consensus 294 ~~~ 296 (394)
T COG4886 294 PLI 296 (394)
T ss_pred hhh
Confidence 643
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.6e-10 Score=105.20 Aligned_cols=137 Identities=22% Similarity=0.265 Sum_probs=98.8
Q ss_pred cccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhh
Q 009972 83 KGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL 162 (521)
Q Consensus 83 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 162 (521)
+|..-..+...+.|++||||+|.|+ .+.++..-++.++.|++|+|.+. .+- ++..|++|+.||||+|.++ .+..+-
T Consensus 273 ~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh 348 (490)
T KOG1259|consen 273 NGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWH 348 (490)
T ss_pred CCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhH
Confidence 3444445566677888888888887 56777777888888888888886 333 3777888888888888887 555666
Q ss_pred hCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCC------CcccCCCCCEEeccCCccccCC
Q 009972 163 GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT------GLCHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 163 ~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~------~~~~l~~L~~L~ls~N~l~g~i 227 (521)
..|.+.+.|.|+.|.+. .+. + ......+..+++++|++. ++.+++-|+.+.|.+|.+.+.+
T Consensus 349 ~KLGNIKtL~La~N~iE-~LS-G--L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 349 LKLGNIKTLKLAQNKIE-TLS-G--LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhcCEeeeehhhhhHh-hhh-h--hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 67778888888888775 221 1 111245677788888775 4677899999999999998543
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.1e-08 Score=92.89 Aligned_cols=136 Identities=20% Similarity=0.206 Sum_probs=96.3
Q ss_pred hhhhhCcCCCeeEEEEEeCCCCEEEEEEeeeec------------------cccchhhHHHHHHHHHHHhccCCC--ccc
Q 009972 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE------------------EHWTGYLELYFQREVADLARINHE--NTG 421 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~------------------~~~~~~~~~~~~~E~~~l~~l~H~--niv 421 (521)
+++.||-|.-+.||.|..+.|.++|||.=.... ..|.-..+....+|.++|.++.-. .+.
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 358899999999999999999999999632221 111222345678999999998655 666
Q ss_pred eeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC
Q 009972 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~ 501 (521)
+.+++- ...+||||+++-.|...- ++....-.|...|.+-+.-.-.. ++||+|+.+-||++++|
T Consensus 175 ~P~~~n------RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~d 238 (304)
T COG0478 175 KPIAWN------RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTED 238 (304)
T ss_pred Cccccc------cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecC
Confidence 666542 468999999985554321 12223334444444444444455 99999999999999999
Q ss_pred CCeeeCCCchhh
Q 009972 502 FSPKVSPLCLSF 513 (521)
Q Consensus 502 ~~~kl~DfGla~ 513 (521)
|.+.+.||=-+-
T Consensus 239 g~~~vIDwPQ~v 250 (304)
T COG0478 239 GDIVVIDWPQAV 250 (304)
T ss_pred CCEEEEeCcccc
Confidence 999999996443
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.3e-09 Score=105.87 Aligned_cols=149 Identities=24% Similarity=0.314 Sum_probs=106.9
Q ss_pred EEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccc-cc
Q 009972 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS-NG 153 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~ 153 (521)
.+-++-+|+. +|..+- ..-..++|..|+|+.+.|.+|..+++|+.||||+|+|+.+-|..|.++.+|..|-+.+ |+
T Consensus 51 VdCr~~GL~e-VP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLTE-VPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCccc-CcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 3444555554 454432 4567899999999988899999999999999999999999999999999988877666 99
Q ss_pred CCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCcc-cc-
Q 009972 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK-CL- 231 (521)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~-~l- 231 (521)
|+...-..|++|.+|+.|.+.-|++. .++.. .+..|++|..|.+-+|.+. .|+. .+
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~-Cir~~--------------------al~dL~~l~lLslyDn~~q-~i~~~tf~ 185 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHIN-CIRQD--------------------ALRDLPSLSLLSLYDNKIQ-SICKGTFQ 185 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhc-chhHH--------------------HHHHhhhcchhcccchhhh-hhcccccc
Confidence 99666678999999999999999997 44331 2334555666666666655 4443 22
Q ss_pred --ccCCCcccCCCccCCCC
Q 009972 232 --EYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 232 --~~l~~l~~~~N~l~~~~ 248 (521)
..++.+.+..|.+-+.|
T Consensus 186 ~l~~i~tlhlA~np~icdC 204 (498)
T KOG4237|consen 186 GLAAIKTLHLAQNPFICDC 204 (498)
T ss_pred chhccchHhhhcCcccccc
Confidence 33344555555444433
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.3e-07 Score=84.15 Aligned_cols=143 Identities=13% Similarity=0.051 Sum_probs=104.4
Q ss_pred hCcCCCeeEEEEEeCCCCEEEEEEeeee-ccccc-hhhHHHHHHHHHHHhccCCCc--cceeeeEee---cCCCCceEEE
Q 009972 366 IGSSPDSLVYKGTMKGGPEIAVISLCIK-EEHWT-GYLELYFQREVADLARINHEN--TGKLLGYCR---ESSPFTRMLV 438 (521)
Q Consensus 366 lg~G~~g~Vy~~~~~~~~~vavk~~~~~-~~~~~-~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~---~~~~~~~~lv 438 (521)
-++|+.+-|++-.+.+. .+-+|+-... ...+. +..+..|.+|+..+.++...+ +.++. ++. .....+.+||
T Consensus 26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 46788888999877554 5778875311 11111 334678999999999985433 44444 332 1222257899
Q ss_pred EeeCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--eeeCCCchhh
Q 009972 439 FDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKVSPLCLSF 513 (521)
Q Consensus 439 ~ey~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~--~kl~DfGla~ 513 (521)
+|-+++ -+|.+++......+.+...+..+..++++.++-||+. ++.|+|+-+.||+++.++. +++.||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 998874 4899988654444567888899999999999999999 9999999999999986666 9999997655
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.67 E-value=4e-09 Score=103.82 Aligned_cols=171 Identities=21% Similarity=0.209 Sum_probs=83.9
Q ss_pred CEEEEEecCCCCcccCC--ccccCCCCCCEEEcCCCcccccCC--cccCCCCCCcEEEccCCCCCCCCCccc-CCCcCCc
Q 009972 71 RVLKINISGSSLKGFLA--PELGLLTYLQELILHGNNLIGIIP--KELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLV 145 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~ 145 (521)
.++.+.|.+....- .+ .....|++++.|||+.|-|....| .....|++|+.|+|+.|++.-...+.. ..+++|+
T Consensus 122 kL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 122 KLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred hhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 45555555554432 12 245566666777777766653322 223456667777777776642222111 2355666
Q ss_pred eEecccccCCCCC-chhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc------ccCCCCCEEec
Q 009972 146 KINLQSNGLTGRL-PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL------CHLSQLKVADF 218 (521)
Q Consensus 146 ~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~------~~l~~L~~L~l 218 (521)
.|.|+.+.|+-.. -.....+|+|+.|+|..|...+. ..........++.+++++|++-.+ ..++.|+.|++
T Consensus 201 ~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~--~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 201 QLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILI--KATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred eEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccce--ecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 6666666665211 11223456666666666641111 101111123455566666655432 24555666666
Q ss_pred cCCccccC-Cccc--------cccCCCcccCCCcc
Q 009972 219 SYNFFVGS-IPKC--------LEYLPSTSFQGNCL 244 (521)
Q Consensus 219 s~N~l~g~-ip~~--------l~~l~~l~~~~N~l 244 (521)
+.+.+... +|++ +..++.|....|++
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNI 313 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCcc
Confidence 66655321 2222 34455555555544
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.5e-09 Score=112.70 Aligned_cols=147 Identities=17% Similarity=0.205 Sum_probs=114.5
Q ss_pred hhhCcCCCeeEEEEEeCC--CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMKG--GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~--~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.-||+|.|+.|-...... ...+|+|.+.... ...........|..+-..+. |+|++++++.....+ ..+++.|
T Consensus 26 ~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~--~~~~~~~ 101 (601)
T KOG0590|consen 26 RSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR--SYLLSLS 101 (601)
T ss_pred ccccccccchhhhhhhcCCCcceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCCCc--ccccccC
Confidence 448999999988776643 3456666654432 11222334556777777776 999999999998877 8899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeeecCCCCCCeeecCCC-CeeeCCCchhhhccc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH-TELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~dlk~~NILld~~~-~~kl~DfGla~~~~~ 517 (521)
|.++|++.+.+........+......+..++..|+.|+| +. ++.|||+||+|.+++..+ ..+++|||+|..+..
T Consensus 102 ~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 102 YSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999883222223566677889999999999999 77 999999999999999999 999999999987654
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.8e-07 Score=85.08 Aligned_cols=110 Identities=18% Similarity=0.188 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHhccCCCc--cceeeeEeecCCC--CceEEEEeeCCCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 009972 402 ELYFQREVADLARINHEN--TGKLLGYCRESSP--FTRMLVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476 (521)
Q Consensus 402 ~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~--~~~~lv~ey~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~ 476 (521)
...+.+|...+..++... ..+.+++...... ...++|+|++++- +|.+++..... .+...+..++.++++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 346788888888875433 4566666654321 2458999999974 79998864222 566778899999999999
Q ss_pred HHhcCCCCCeeecCCCCCCeeecCCC---CeeeCCCchhhhcc
Q 009972 477 YLHTELGPPFTISELNSSAVYLTEDF---SPKVSPLCLSFLLV 516 (521)
Q Consensus 477 yLH~~~~~~ivH~dlk~~NILld~~~---~~kl~DfGla~~~~ 516 (521)
-||.. +|+|+|++++|||++.+. .+.++||+-++...
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999 999999999999998876 89999999877643
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.6e-08 Score=105.00 Aligned_cols=168 Identities=24% Similarity=0.268 Sum_probs=98.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..+..|++.+|.|... ...+..+++|++|+|++|+|+... .+..++.|+.|++++|.++. + ..+..++.|+.+++
T Consensus 95 ~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~-~-~~~~~l~~L~~l~l 169 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISD-I-SGLESLKSLKLLDL 169 (414)
T ss_pred cceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhheeccCcchh-c-cCCccchhhhcccC
Confidence 4566777777777653 222666777777777777776443 25556667777777777762 2 34555677777777
Q ss_pred ccccCCCCCchh-hhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCC---C--CCEEeccCCcc
Q 009972 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS---Q--LKVADFSYNFF 223 (521)
Q Consensus 150 s~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~---~--L~~L~ls~N~l 223 (521)
++|.++. ++.. ...+.+|+.+++.+|.+. .+.... ....+..+++..|.++.+.++. . |+.+++++|.+
T Consensus 170 ~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~-~i~~~~---~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i 244 (414)
T KOG0531|consen 170 SYNRIVD-IENDELSELISLEELDLGGNSIR-EIEGLD---LLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRI 244 (414)
T ss_pred Ccchhhh-hhhhhhhhccchHHHhccCCchh-cccchH---HHHHHHHhhcccccceeccCcccchhHHHHHHhcccCcc
Confidence 7777763 3222 456667777777777665 221100 0112233356666665544433 2 67788888877
Q ss_pred ccC--CccccccCCCcccCCCccCCC
Q 009972 224 VGS--IPKCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 224 ~g~--ip~~l~~l~~l~~~~N~l~~~ 247 (521)
.-. ....+..++.+++..|.+...
T Consensus 245 ~~~~~~~~~~~~l~~l~~~~n~~~~~ 270 (414)
T KOG0531|consen 245 SRSPEGLENLKNLPVLDLSSNRISNL 270 (414)
T ss_pred ccccccccccccccccchhhcccccc
Confidence 632 223455666677777765554
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.6e-07 Score=92.41 Aligned_cols=142 Identities=15% Similarity=0.154 Sum_probs=109.8
Q ss_pred CCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC--CCCceEEEEeeCCC-C
Q 009972 370 PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLVFDYASN-G 445 (521)
Q Consensus 370 ~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~ey~~~-g 445 (521)
...+.||+... ||..|++|++...+.+.. .....-+++++++.|.|+|++..++... .....++||+|.|+ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~----nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST----NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc----ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 44578999886 899999999844332211 1223457889999999999999987621 11268999999986 5
Q ss_pred Chhhhhhc-------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 446 TLYEHLHY-------------GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 446 ~L~~~l~~-------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
+|.++--. ......++...+.++.|+..||.++|+. |..-+-|.+++||++.+.+++|+.-|+.
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccce
Confidence 77775431 1123467889999999999999999999 9999999999999999999999999988
Q ss_pred hhcccc
Q 009972 513 FLLVSS 518 (521)
Q Consensus 513 ~~~~~~ 518 (521)
.++.+.
T Consensus 441 Dvl~~d 446 (655)
T KOG3741|consen 441 DVLQED 446 (655)
T ss_pred eeecCC
Confidence 776643
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.5e-07 Score=94.96 Aligned_cols=148 Identities=17% Similarity=0.184 Sum_probs=96.4
Q ss_pred hhh-hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccc------------------h--------h----------hHH
Q 009972 361 DFS-NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT------------------G--------Y----------LEL 403 (521)
Q Consensus 361 ~f~-~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~------------------~--------~----------~~~ 403 (521)
.|+ +-|+.++-|.||+|++++|+.||||+....-...- . . .+-
T Consensus 127 eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~El 206 (517)
T COG0661 127 EFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREEL 206 (517)
T ss_pred HcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHh
Confidence 344 67899999999999999999999998643311000 0 0 011
Q ss_pred HHHHHHHHHhcc----CCCccceeeeEeec-CCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHH-HHH
Q 009972 404 YFQREVADLARI----NHENTGKLLGYCRE-SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG-LKY 477 (521)
Q Consensus 404 ~~~~E~~~l~~l----~H~niv~l~g~~~~-~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~g-L~y 477 (521)
++.+|..-+.++ ++..=+++=..|++ .. ...|+|||++|-.+.+....+. ...+ +..|+..++++ +.-
T Consensus 207 Dy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~--~~VLtmE~i~Gi~i~d~~~l~~-~g~d---~k~ia~~~~~~f~~q 280 (517)
T COG0661 207 DYRREAANAERFRENFKDDPDVYVPKVYWEYTT--RRVLTMEWIDGIKISDIAALKS-AGID---RKELAELLVRAFLRQ 280 (517)
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEeceeehhccC--CcEEEEEeeCCEecccHHHHHh-cCCC---HHHHHHHHHHHHHHH
Confidence 345555555444 22333333344433 22 5799999999988888743222 2244 44555544443 222
Q ss_pred HhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 478 LH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+-.. +++|.|..|.||+++.+++..+-|||+...+++
T Consensus 281 ~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 281 LLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHhc---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 3334 899999999999999999999999999877654
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.6e-07 Score=85.03 Aligned_cols=61 Identities=18% Similarity=0.086 Sum_probs=53.8
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 445 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+|.++++.. ...++|.++..|+.|++.||+|||+. + ||+|||+++++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~ 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTP 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecc
Confidence 7899999743 34699999999999999999999998 5 999999999999999 999987643
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=5e-07 Score=94.24 Aligned_cols=118 Identities=19% Similarity=0.142 Sum_probs=93.5
Q ss_pred CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCC
Q 009972 381 GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVS 460 (521)
Q Consensus 381 ~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~ 460 (521)
++.+|.|........ .......+-++.++.+|||||++++..++.+. ..|||+|-+. .|..++.+. .
T Consensus 36 ~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~--~~ylvTErV~--Pl~~~lk~l-----~ 102 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG--TLYLVTERVR--PLETVLKEL-----G 102 (690)
T ss_pred cCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhhcccC--ceEEEeeccc--cHHHHHHHh-----H
Confidence 677888877643322 12234667788899999999999999998877 7999999986 477777532 2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 461 ~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
.....-.+.||+.||.|||+.| +++|++|.-+.|++++.|+-||++|-++.
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~ 153 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVS 153 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEe
Confidence 3344456789999999999887 89999999999999999999999998764
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=9.7e-09 Score=106.76 Aligned_cols=122 Identities=28% Similarity=0.320 Sum_probs=94.2
Q ss_pred CCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccc
Q 009972 119 RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (521)
Q Consensus 119 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~ 198 (521)
.|.+.+.++|.+. ...+++.-++.|+.|||++|+++. . +.+..|+.|++|||+.|.|+ .+|.....+ -.+..+.
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~-v-~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~g--c~L~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTK-V-DNLRRLPKLKHLDLSYNCLR-HVPQLSMVG--CKLQLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhh-h-HHHHhcccccccccccchhc-cccccchhh--hhheeee
Confidence 4778888999998 777888889999999999999984 3 37888999999999999998 677532221 2366778
Q ss_pred cccCCCCC---cccCCCCCEEeccCCccccC---Cc-cccccCCCcccCCCccCC
Q 009972 199 ASSANLTG---LCHLSQLKVADFSYNFFVGS---IP-KCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 199 l~~n~l~~---~~~l~~L~~L~ls~N~l~g~---ip-~~l~~l~~l~~~~N~l~~ 246 (521)
+.+|.++. +.+|.+|+.||+|+|-|.+- .| ..+..|..|.+.||++-+
T Consensus 239 lrnN~l~tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 239 LRNNALTTLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ecccHHHhhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 88888765 55788999999999988653 23 335667788999996544
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=98.42 E-value=8.2e-07 Score=81.27 Aligned_cols=104 Identities=25% Similarity=0.313 Sum_probs=82.4
Q ss_pred HHHHHHHhccCC-CccceeeeEeecCCCCceEEEEeeCCCCChhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 009972 406 QREVADLARINH-ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELG 483 (521)
Q Consensus 406 ~~E~~~l~~l~H-~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~ 483 (521)
..|.-++..+++ +++.+++|+| ..+++.||.+.+++.+.-.. ..-..-+|..|.+||.++.+.+.++++...
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C------G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~ 80 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC------GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPL 80 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC------CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 357888888876 6999999999 35789999998766432100 011125899999999999999999999655
Q ss_pred CCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 484 PPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 484 ~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
..+.-.|++++|+-+++++++|+.|...+-..
T Consensus 81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred CcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 57778999999999999999999998865543
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.9e-06 Score=89.92 Aligned_cols=165 Identities=16% Similarity=0.161 Sum_probs=100.9
Q ss_pred cccccCHHHHHHHHhh------------hh-hhhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc---c-----------
Q 009972 346 DVVRFSRQELEVACED------------FS-NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW---T----------- 398 (521)
Q Consensus 346 ~~~~~~~~~l~~~~~~------------f~-~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~---~----------- 398 (521)
..++++++|+.+..+. |+ +-||.-+.|.||+|++++|+.||||.-...-+.. +
T Consensus 136 ~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l 215 (538)
T KOG1235|consen 136 QAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVL 215 (538)
T ss_pred cCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHH
Confidence 4566777776554322 33 6799999999999999999999999753321110 0
Q ss_pred -------------hh------hHHHHHHHHHHHhc----cCCCcc---ceeeeEeecCCCCceEEEEeeCCCCChhhhhh
Q 009972 399 -------------GY------LELYFQREVADLAR----INHENT---GKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452 (521)
Q Consensus 399 -------------~~------~~~~~~~E~~~l~~----l~H~ni---v~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~ 452 (521)
.+ .+-+|.+|.+-..+ ++|-+. |.+=.++++-.. .+.|+||||+|..+.+.-.
T Consensus 216 ~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st-~RVLtME~~~G~~i~Dl~~ 294 (538)
T KOG1235|consen 216 QKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLST-KRVLTMEYVDGIKINDLDA 294 (538)
T ss_pred HHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCc-ceEEEEEecCCccCCCHHH
Confidence 00 01135555544333 345551 223333333221 5799999999987766532
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC----CCCeeeCCCchhhhccc
Q 009972 453 YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 453 ~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~----~~~~kl~DfGla~~~~~ 517 (521)
-.. ..++-. +|+..+.++ |++.....|++|+|--|.||+++. ++++.+-|||+.+.+..
T Consensus 295 i~~-~gi~~~---~i~~~l~~~--~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 295 IDK-RGISPH---DILNKLVEA--YLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHH-cCCCHH---HHHHHHHHH--HHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 111 123443 344433333 222222338999999999999984 67899999999887654
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.1e-07 Score=87.75 Aligned_cols=96 Identities=21% Similarity=0.340 Sum_probs=78.7
Q ss_pred HHhccCCCccceeeeEeecCC---CCceEEEEeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 009972 411 DLARINHENTGKLLGYCRESS---PFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPP 485 (521)
Q Consensus 411 ~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 485 (521)
-+-.+-|.|||+++.|+.+.+ ..+...+.|||+.|++..+|++.. ...+....-.+++.||..||.|||+ |.|+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCc
Confidence 345567999999999986543 125688999999999999998532 2345666668999999999999998 7999
Q ss_pred eeecCCCCCCeeecCCCCeeeC
Q 009972 486 FTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 486 ivH~dlk~~NILld~~~~~kl~ 507 (521)
|+|+++..+-|++..++-+|+.
T Consensus 199 iihgnlTc~tifiq~ngLIkig 220 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIG 220 (458)
T ss_pred cccCCcchhheeecCCceEEec
Confidence 9999999999999988877765
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.4e-08 Score=84.82 Aligned_cols=109 Identities=23% Similarity=0.333 Sum_probs=81.8
Q ss_pred CEEEEEecCCCCcccCCcc---ccCCCCCCEEEcCCCcccccCCcccC-CCCCCcEEEccCCCCCCCCCcccCCCcCCce
Q 009972 71 RVLKINISGSSLKGFLAPE---LGLLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~---l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 146 (521)
.+-.+||+++.|-- +++. +.....|+..+|++|.|. .+|..|. ..+.++.|+|++|.|+ .+|.++..++.|+.
T Consensus 28 E~h~ldLssc~lm~-i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMY-IADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred HhhhcccccchhhH-HHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 34556777776632 3433 445566677788888888 4555554 4457888999999998 78888999999999
Q ss_pred EecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCC
Q 009972 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 184 (521)
|+++.|.|. ..|.-+..|.+|-.|+..+|.+. .+|.
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcH
Confidence 999999988 78888888888889998888876 5553
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.34 E-value=6.3e-06 Score=77.95 Aligned_cols=133 Identities=7% Similarity=-0.064 Sum_probs=81.8
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCcc--ceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT--GKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~~~~~~~lv~ey 441 (521)
..||+|..+.||+. .+..+++|...... ......+|.+++..+..-.+ .+.++++...+ ...+||||
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~--~~glv~e~ 75 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF------DKETIKREFDASRKVFSLGIPTPHPFDLVEDGG--RLGLIYEL 75 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCC--eeeeeeee
Confidence 46899999999984 24456777653211 22346889999888854433 56677776655 56889999
Q ss_pred CCCCC-hhhhhhcCCCCCCCHHHHHHHHHHHHHH---------------------------------------HHHHhcC
Q 009972 442 ASNGT-LYEHLHYGERCQVSWTRRMKIVIGIARG---------------------------------------LKYLHTE 481 (521)
Q Consensus 442 ~~~g~-L~~~l~~~~~~~l~~~~~~~i~~~ia~g---------------------------------------L~yLH~~ 481 (521)
+++.+ +.+.+. .+...+..++..+|+. ..+|...
T Consensus 76 i~G~~~~~~~~~------~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~ 149 (226)
T TIGR02172 76 IVGKRSFSRIIS------DNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEV 149 (226)
T ss_pred cCCccchhhhhc------CCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhC
Confidence 99863 211110 0001111111111111 2222211
Q ss_pred -CCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 482 -LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 482 -~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
..+.++|+|+.|.||++++++ +.|.||+.+..
T Consensus 150 ~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 150 PDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 134678999999999999888 99999998764
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.9e-09 Score=108.31 Aligned_cols=103 Identities=33% Similarity=0.361 Sum_probs=83.0
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCc-ccCCCcCCceEec
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-EIGNLTGLVKINL 149 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L 149 (521)
.+...+.+.|.|.- +..++.-++.|+.|||++|+++..- .+..|++|++|||++|++. .+|. ....+. |+.|+|
T Consensus 165 ~L~~a~fsyN~L~~-mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLVL-MDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHHh-HHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 46677888888875 5677888999999999999998543 7889999999999999998 5553 233343 999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
++|.++. + ..+.+|.+|+.||++.|-|.+
T Consensus 240 rnN~l~t-L-~gie~LksL~~LDlsyNll~~ 268 (1096)
T KOG1859|consen 240 RNNALTT-L-RGIENLKSLYGLDLSYNLLSE 268 (1096)
T ss_pred cccHHHh-h-hhHHhhhhhhccchhHhhhhc
Confidence 9999983 3 357889999999999998874
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-07 Score=93.50 Aligned_cols=175 Identities=22% Similarity=0.232 Sum_probs=117.2
Q ss_pred CCEEEEEecCCCCcccCC--ccccCCCCCCEEEcCCCcccccCCccc-CCCCCCcEEEccCCCCCCC-CCcccCCCcCCc
Q 009972 70 DRVLKINISGSSLKGFLA--PELGLLTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGP-IPPEIGNLTGLV 145 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~ 145 (521)
.+|+.|||++|-+...-+ .-...|++|+.|+|+.|++.-...... ..+++|+.|.|+.+.|+.. +-.....+++|+
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 479999999999986432 345789999999999999873322222 3578899999999998731 112234578999
Q ss_pred eEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----------ccCCCCC
Q 009972 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----------CHLSQLK 214 (521)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----------~~l~~L~ 214 (521)
.|+|..|..-+..-.....+..|++|||++|++- ..+.....+..+.+..++++.+.++++ ..+++|+
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~ 304 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLE 304 (505)
T ss_pred HhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccce
Confidence 9999999533333344556778999999999886 344322222234566677777766543 2368999
Q ss_pred EEeccCCccccCCc-----cccccCCCcccCCCccCC
Q 009972 215 VADFSYNFFVGSIP-----KCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 215 ~L~ls~N~l~g~ip-----~~l~~l~~l~~~~N~l~~ 246 (521)
+|+++.|++. ..+ ..++++..+.+..|.++.
T Consensus 305 ~L~i~~N~I~-~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 305 YLNISENNIR-DWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred eeecccCccc-cccccchhhccchhhhhhcccccccc
Confidence 9999999985 222 123445555555664443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.5e-07 Score=98.60 Aligned_cols=104 Identities=19% Similarity=0.165 Sum_probs=69.8
Q ss_pred hhhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.|..|+||.||.++++. .+.+|+| +..+.. +.+ ||..+.+ ..+.|
T Consensus 89 klisngAygavylvrh~~trqrfa~k-iNkq~l---------ilR-----------nilt~a~--------npfvv---- 135 (1205)
T KOG0606|consen 89 KLISNGAYGAVYLVRHKETRQRFAMK-INKQNL---------ILR-----------NILTFAG--------NPFVV---- 135 (1205)
T ss_pred EeeccCCCCceeeeeccccccchhhc-ccccch---------hhh-----------ccccccC--------Cccee----
Confidence 679999999999999974 5667773 322111 111 2222211 12333
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|+=...++.-+..+.+. +.+++|+|+. +|+|||+||+|.+|..-|.+|+.|||+.+..
T Consensus 136 --gDc~tllk~~g~lPvdm----------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~G 193 (1205)
T KOG0606|consen 136 --GDCATLLKNIGPLPVDM----------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKG 193 (1205)
T ss_pred --chhhhhcccCCCCcchh----------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhh
Confidence 44444443222222221 7889999999 9999999999999999999999999998863
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.30 E-value=7.8e-06 Score=76.26 Aligned_cols=140 Identities=12% Similarity=0.183 Sum_probs=94.2
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccc--------------------hhhHHHHHHHHHHHhccC--CCccc
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT--------------------GYLELYFQREVADLARIN--HENTG 421 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~--------------------~~~~~~~~~E~~~l~~l~--H~niv 421 (521)
-.|++|.-+.||+|...++..+|||+......... ........+|..-|.++. +-.+.
T Consensus 54 g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 54 GCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 35778888999999988899999999854321110 011234566777777663 33444
Q ss_pred eeeeEeecCCCCceEEEEeeCCCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 009972 422 KLLGYCRESSPFTRMLVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~ 500 (521)
+.+++. .-.|||||+... .-.-.|.. .++...+...+..++.+.+.-|-..+ ++||+||..=|||+.
T Consensus 134 ~Pi~~~------~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~~a--~LVHgDLSEyNiL~~- 201 (268)
T COG1718 134 EPIAFR------NNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYKEA--GLVHGDLSEYNILVH- 201 (268)
T ss_pred Cceeec------CCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHHhc--CcccccchhhheEEE-
Confidence 555544 247999999753 22222221 11233356677788888888887632 999999999999999
Q ss_pred CCCeeeCCCchhhhc
Q 009972 501 DFSPKVSPLCLSFLL 515 (521)
Q Consensus 501 ~~~~kl~DfGla~~~ 515 (521)
++.+.|+|||-|-..
T Consensus 202 ~~~p~iID~~QaV~~ 216 (268)
T COG1718 202 DGEPYIIDVSQAVTI 216 (268)
T ss_pred CCeEEEEECcccccc
Confidence 899999999977544
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.1e-07 Score=93.80 Aligned_cols=146 Identities=16% Similarity=0.142 Sum_probs=107.2
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEeC--CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCC
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
+.+|. ..||.|.|+.||+...+ ++..+++|.+...... ...+..-..|+-+...+ .|.+++....-+....
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~--~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r-- 339 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT--FASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR-- 339 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccc--hHhhhcchhhhhHhhHhhcccccCCCCCCccccc--
Confidence 34454 67999999999998764 5677888876433221 11112224555555555 5777777655444333
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeeeCCCchh
Q 009972 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLS 512 (521)
Q Consensus 434 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~-~~~kl~DfGla 512 (521)
..++--||++++++...+. -...++...++++..+++.++.++|+. .++|+|+||+||++..+ +.-++.|||.+
T Consensus 340 ~~~ip~e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccCchhhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccc
Confidence 5679999999998876652 223478888999999999999999988 99999999999999876 88999999988
Q ss_pred h
Q 009972 513 F 513 (521)
Q Consensus 513 ~ 513 (521)
+
T Consensus 415 t 415 (524)
T KOG0601|consen 415 T 415 (524)
T ss_pred c
Confidence 6
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=8e-08 Score=80.35 Aligned_cols=112 Identities=21% Similarity=0.207 Sum_probs=89.6
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.-+++.++|++|.+....+.--..++.++.|+|++|.|+ .+|.++..++.|+.|++++|.|. ..|.-+..|.+|..|+
T Consensus 52 ~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 52 GYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred CceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 457899999999999854444455679999999999999 68999999999999999999998 7888888899999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCC
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
..+|.+. .+|-.+..-+.+-..++.++.+.+.-|
T Consensus 130 s~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 130 SPENARA-EIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred CCCCccc-cCcHHHhccccHHHHHhcCCcccccCc
Confidence 9999988 677664433333444556666665444
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.24 E-value=2e-07 Score=96.69 Aligned_cols=84 Identities=35% Similarity=0.381 Sum_probs=42.6
Q ss_pred CCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEE
Q 009972 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEEL 171 (521)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 171 (521)
.+..++.+++..|.+.. +-..+..+++|..|++.+|+|. .+...+..+++|++|+|++|.|+... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 34445555555555542 2223455555555555555555 23222445555555555555555322 24444555555
Q ss_pred eCCCCcCC
Q 009972 172 HLDRNRLQ 179 (521)
Q Consensus 172 ~Ls~N~l~ 179 (521)
++++|.++
T Consensus 146 ~l~~N~i~ 153 (414)
T KOG0531|consen 146 NLSGNLIS 153 (414)
T ss_pred eeccCcch
Confidence 55555554
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.22 E-value=1e-06 Score=59.77 Aligned_cols=35 Identities=46% Similarity=0.768 Sum_probs=13.3
Q ss_pred CcEEEccCCCCCCCCCcccCCCcCCceEecccccCC
Q 009972 120 LKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155 (521)
Q Consensus 120 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 155 (521)
|++|++++|+|+ .+|+.+++|++|+.|++++|+++
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 344444444443 33333444444444444444433
|
... |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.8e-06 Score=89.18 Aligned_cols=147 Identities=18% Similarity=0.102 Sum_probs=110.6
Q ss_pred hhhhCc--CCCeeEEEEEe--C-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceE
Q 009972 363 SNIIGS--SPDSLVYKGTM--K-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 363 ~~~lg~--G~~g~Vy~~~~--~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
..-+|. |.+|.||.++. + ++..+|+|+-..... .+.....=.+|+....++ .|+|.++....+...+ ..+
T Consensus 119 ~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s--~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~--~lf 194 (524)
T KOG0601|consen 119 SSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS--PPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG--ILF 194 (524)
T ss_pred ccccccCCCCCceeecccCCcccCCcccccccccCCCC--CccccccccchhhcccccCccccccccCcccccCC--cce
Confidence 467888 99999999988 4 677888887422211 111122235677666677 6999999877777766 788
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCCCeeecCCCCCCeeecCC-CCeeeCCCch
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR----GLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCL 511 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivH~dlk~~NILld~~-~~~kl~DfGl 511 (521)
+-+|++. .+|.++.+... ..++......+..+..+ ||.++|.. .++|-|+||.||++.++ ...++.|||+
T Consensus 195 iqtE~~~-~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeecccc-chhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcce
Confidence 9999997 48888876332 22555666667777777 99999999 99999999999999988 8899999999
Q ss_pred hhhcccc
Q 009972 512 SFLLVSS 518 (521)
Q Consensus 512 a~~~~~~ 518 (521)
.+.+.+.
T Consensus 270 v~~i~~~ 276 (524)
T KOG0601|consen 270 VSKISDG 276 (524)
T ss_pred eEEccCC
Confidence 8876653
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.9e-06 Score=58.38 Aligned_cols=37 Identities=41% Similarity=0.641 Sum_probs=32.9
Q ss_pred cCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCC
Q 009972 142 TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
++|++|+|++|+++ .+|+.+++|++|++|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 47999999999999 68888999999999999999998
|
... |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.5e-06 Score=96.94 Aligned_cols=104 Identities=30% Similarity=0.448 Sum_probs=50.8
Q ss_pred CEEEEEecCCC--CcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 71 RVLKINISGSS--LKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 71 ~l~~L~L~~n~--l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.++.|-+.+|. +....+..|..++.|+.|||++|.=-+.+|++++.|-+|++|+|+...++ .+|..+++|..|.+||
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 34444444443 22222222444555555555554444455555555555555555555555 4555555555555555
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCC
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDR 175 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 175 (521)
+..+.-...+|..+..|.+|++|.+..
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPR 651 (889)
T ss_pred cccccccccccchhhhcccccEEEeec
Confidence 555444334444444455555555443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 521 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-19 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 9e-19 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-10 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-10 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-09 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 3e-09 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 6e-09 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-08 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 5e-08 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-08 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-08 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-07 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 7e-07 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 8e-07 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 1e-06 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 8e-07 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 8e-07 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-06 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 8e-07 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 4e-05 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 8e-05 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 8e-05 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 9e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 2e-04 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 3e-04 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 4e-04 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 521 | |||
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 5e-52 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 4e-36 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 2e-34 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 9e-15 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 2e-38 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 2e-36 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 5e-35 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 6e-34 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-33 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 5e-33 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-32 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 4e-31 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 6e-29 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-28 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 1e-34 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 2e-31 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 6e-30 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-26 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 4e-25 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 4e-25 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-10 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-26 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-22 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-22 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 3e-22 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-19 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 6e-17 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 4e-15 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 5e-26 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-25 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-23 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-22 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 5e-21 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-19 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 6e-17 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-16 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 1e-25 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 2e-25 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-25 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 5e-23 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-22 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 6e-21 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-19 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 4e-19 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-18 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 5e-18 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-17 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-11 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-09 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-21 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-20 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 5e-20 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-12 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-12 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 2e-20 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 5e-20 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 8e-17 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 4e-16 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-16 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-14 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 5e-13 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-10 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-10 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 1e-06 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 7e-05 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 7e-20 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 8e-20 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 9e-20 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 9e-17 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-16 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 5e-12 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 3e-11 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 3e-19 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 5e-19 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 9e-19 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-18 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 2e-18 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-16 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 2e-15 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 2e-15 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 8e-15 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 6e-13 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-07 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 1e-18 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-17 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 4e-17 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 9e-16 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-14 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 4e-11 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 8e-10 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-18 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-16 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-15 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 5e-12 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 5e-07 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 3e-18 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 3e-18 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 4e-18 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-16 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-16 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-13 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-08 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 4e-05 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 6e-04 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 4e-18 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-17 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-16 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-16 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 9e-15 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-13 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 5e-10 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-06 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 2e-17 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 3e-17 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 2e-16 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 3e-16 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 3e-16 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-16 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-15 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-14 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-13 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-12 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-08 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-06 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-05 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 6e-16 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 7e-16 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-15 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-14 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 4e-13 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 3e-10 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 8e-10 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 6e-07 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-14 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 3e-14 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 7e-13 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 8e-13 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-10 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 5e-05 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-14 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 4e-14 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 8e-14 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-12 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 7e-11 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 3e-05 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-14 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-13 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-12 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-14 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 1e-10 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 9e-08 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 3e-05 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 3e-14 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 7e-13 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 1e-10 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-10 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 6e-07 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 4e-06 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-05 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 5e-14 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-12 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-11 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 8e-11 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-10 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 8e-10 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 8e-14 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 4e-11 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 6e-11 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 1e-05 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-13 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 6e-11 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-09 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 4e-13 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 1e-12 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-11 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-11 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 6e-06 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 5e-13 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 6e-11 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 9e-10 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 6e-13 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-10 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 4e-09 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-07 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 6e-05 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 9e-13 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-12 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-11 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-11 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 2e-10 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 4e-09 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-12 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-12 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-10 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-10 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 4e-08 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 8e-08 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 8e-08 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-12 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 3e-11 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 6e-10 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 4e-04 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-12 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 9e-12 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 8e-10 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 9e-04 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-12 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-11 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-10 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-10 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-09 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-12 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-10 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-08 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 5e-07 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-06 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 9e-04 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-12 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 5e-12 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-11 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-10 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-10 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-07 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 5e-12 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 4e-11 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-10 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-10 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-04 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 6e-12 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 4e-08 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 3e-06 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 7e-12 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-10 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-10 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-06 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-11 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-11 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 5e-11 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-10 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 9e-09 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-08 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 9e-08 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 1e-11 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 6e-10 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-09 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-08 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 4e-04 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-11 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-07 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 5e-11 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 8e-10 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 9e-09 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 8e-11 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-08 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-10 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-09 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-10 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 8e-06 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 4e-10 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 9e-08 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-07 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-10 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-09 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-07 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-07 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 5e-10 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 1e-09 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 7e-09 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 4e-07 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 9e-10 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-09 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 6e-09 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-08 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-07 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 7e-09 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-08 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 1e-08 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 1e-08 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-08 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-07 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 8e-07 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-05 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 5e-04 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 2e-08 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 2e-08 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 2e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 4e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-07 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 7e-05 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 3e-08 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 3e-08 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 3e-08 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 3e-08 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 3e-08 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-08 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 6e-08 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-07 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-05 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 4e-08 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 4e-08 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 4e-08 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 5e-08 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 5e-08 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 6e-08 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 6e-08 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 2e-04 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 6e-08 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 6e-08 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 6e-08 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 7e-08 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-07 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-06 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 8e-08 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 8e-08 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 9e-08 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 1e-07 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 1e-07 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 1e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 1e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-07 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 1e-07 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 1e-07 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 1e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 8e-07 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 2e-07 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 3e-07 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 3e-07 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 3e-07 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 5e-07 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 5e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 6e-07 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 7e-07 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 8e-07 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 8e-07 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 1e-06 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 2e-06 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 2e-06 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 2e-06 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 2e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 2e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 6e-06 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 1e-05 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 2e-05 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 3e-05 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 7e-05 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-04 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 2e-04 |
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 5e-52
Identities = 65/231 (28%), Positives = 95/231 (41%), Gaps = 22/231 (9%)
Query: 31 ALTTFKEAIYEDPHLVLSNWN-ALDADPCHWTGIACSDAR--DRVLKINISGSSLKG--F 85
AL K+ + L S+W D W G+ C RV +++SG +L
Sbjct: 10 ALLQIKKDLGNPTTL--SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYP 67
Query: 86 LAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
+ L L YL L + G NNL+G IP + L +L L + ++G IP + + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA--GSNSGYTANIHGMYASSA 202
V ++ N L+G LP + +L +L + D NR+ GA+P GS S M S
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSK---LFTSMTISRN 184
Query: 203 NLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF---QGNCLQ 245
LTG +L+ L D S N G +T N L
Sbjct: 185 RLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 4e-36
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 24/163 (14%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL-KILDLGTNQLTGP 133
++ S ++L G L P + L L + GN + G IP G +L + + N+LTG
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
IPP NL L ++L N L G G+ + +++HL +N L +
Sbjct: 190 IPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG---------- 238
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L D N G++P+ L L
Sbjct: 239 ------KVGLSKNLNGL------DLRNNRIYGTLPQGLTQLKF 269
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 2e-34
Identities = 48/192 (25%), Positives = 69/192 (35%), Gaps = 37/192 (19%)
Query: 75 INISGSSLKGFLAPELGLLTYL-QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
I G+ + G + G + L + + N L G IP L L +DL N L G
Sbjct: 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGD 212
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
G+ KI+L N L L ++G +L L L NR+ G +P G
Sbjct: 213 ASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQG-------- 263
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQNKDPKQ 251
L L L + S+N G IP+ L+ +++ N
Sbjct: 264 -------------LTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN--------- 301
Query: 252 RATTLCGGAPPA 263
LCG PA
Sbjct: 302 --KCLCGSPLPA 311
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 9e-15
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
KI+++ +SL L ++GL L L L N + G +P+ L LK L L++ N L G
Sbjct: 225 KIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283
Query: 134 IPPEIGNLTGLVKINLQSN-GLTG 156
I P+ GNL +N L G
Sbjct: 284 I-PQGGNLQRFDVSAYANNKCLCG 306
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 148 bits (377), Expect = 2e-38
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 8/170 (4%)
Query: 75 INISGSSLKGFLAPEL-GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++ + G + L G L L L GN+ G +P G L+ L L +N +G
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 134 IPPE-IGNLTGLVKINLQSNGLTGRLPAELGNL-ISLEELHLDRNRLQGAVPAGSNSGYT 191
+P + + + GL ++L N +G LP L NL SL L L N G +
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 192 ANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ +Y + TG L + S+L S+N+ G+IP L L
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 443
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-36
Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 8/182 (4%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ + + G + P L + L L L N L G IP LG L +L+ L L N L G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P E+ + L + L N LTG +P+ L N +L + L NRL G +P G N+
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP--KWIGRLENL 516
Query: 195 HGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDP 249
+ S+ + +G L L D + N F G+IP + N + K
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG-KIAANFIAGKRY 575
Query: 250 KQ 251
Sbjct: 576 VY 577
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 5e-35
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 75 INISGSSLKGFLAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
+++S ++ G + P L LQEL L N G IP L L L L N L+G
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA--GSNSGY 190
IP +G+L+ L + L N L G +P EL + +LE L LD N L G +P+ + +
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT-- 490
Query: 191 TANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
N++ + S+ LTG + L L + S N F G+IP L S
Sbjct: 491 --NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 6e-34
Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 16/171 (9%)
Query: 75 INISGSSLKGFLAPEL---GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+++S +S+ G L+ L + GN + G + + L+ LD+ +N +
Sbjct: 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFS 213
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
I P +G+ + L +++ N L+G + L+ L++ N+ G +P
Sbjct: 214 TGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLK--- 269
Query: 192 ANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
++ + + TG L D S N F G++P
Sbjct: 270 -SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 1e-33
Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 23/180 (12%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124
+D + + +G + +L L+ + G + LD
Sbjct: 579 KNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638
Query: 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
+ N L+G IP EIG++ L +NL N ++G +P E+G+L L L L N+L G +P
Sbjct: 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP- 697
Query: 185 GSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC--LEYLPSTSFQGN 242
+ L+ L D S N G IP+ E P F N
Sbjct: 698 --------------------QAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 737
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 5e-33
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++S ++ + P LG + LQ L + GN L G + + LK+L++ +NQ GPI
Sbjct: 205 LDVSSNNFSTGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 263
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
PP L L ++L N TG +P L G +L L L N GAVP G +
Sbjct: 264 PPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP--PFFGSCSL 319
Query: 194 IHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + SS N +G L + LKV D S+N F G +P+ L L +
Sbjct: 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-32
Identities = 51/188 (27%), Positives = 73/188 (38%), Gaps = 27/188 (14%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ + + L+G + EL + L+ LIL N+L G IP L L + L N+LTG I
Sbjct: 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG--------- 185
P IG L L + L +N +G +PAELG+ SL L L+ N G +PA
Sbjct: 507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 566
Query: 186 ------------SNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIP 228
N G H + G L LS + + + G
Sbjct: 567 ANFIAGKRYVYIKNDGMKKECH-GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625
Query: 229 KCLEYLPS 236
+ S
Sbjct: 626 PTFDNNGS 633
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 4e-31
Identities = 43/232 (18%), Positives = 82/232 (35%), Gaps = 42/232 (18%)
Query: 17 LFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKIN 76
A+ + E L +FK+ + +L +W++ + +PC + G+ C D+V I+
Sbjct: 2 FQASPSQSLYREIHQLISFKDVL--PDKNLLPDWSS-NKNPCTFDGVTCR--DDKVTSID 56
Query: 77 ISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP 136
+S L + L L L+ L L + + G +
Sbjct: 57 LSSKPLNVGF---------------------SAVSSSLLSLTGLESLFLSNSHINGSV-S 94
Query: 137 EIGNLTGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
L ++L N L+G + LG+ L+ L++ N L ++
Sbjct: 95 GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLN-SL 153
Query: 195 HGMYASSANLTG--------LCHLSQLKVADFSYNFFVGSIP----KCLEYL 234
+ S+ +++G +LK S N G + LE+L
Sbjct: 154 EVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFL 205
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 6e-29
Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 9/167 (5%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
I++S + L G + +G L L L L N+ G IP ELG + L LDL TN G I
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P + +G + +N + G+ + N +E H N L+ +
Sbjct: 555 PAAMFKQSGK----IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTR 610
Query: 195 HGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ +S G + + D SYN G IPK + +P
Sbjct: 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPY 657
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-28
Identities = 52/168 (30%), Positives = 67/168 (39%), Gaps = 24/168 (14%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGP 133
+NIS + G + P L LQ L L N G IP L G L LDL N G
Sbjct: 252 LNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+PP G+ + L + L SN +G LP + L + L+ L L N G +P
Sbjct: 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-------- 361
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
S NL+ + L D S N F G I L P + Q
Sbjct: 362 -------SLTNLS-----ASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-34
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA ++FS NI+G VYKG + G +AV L KEE
Sbjct: 9 DPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL--KEER 66
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--YG 454
G EL FQ EV ++ H N +L G+C + R+LV+ Y +NG++ L
Sbjct: 67 TQGG-ELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLVYPYMANGSVASCLRERPE 123
Query: 455 ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
+ + W +R +I +G ARGL YLH P ++ ++ + L E+F V
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 2e-31
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 328 KKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEI 385
K + S D + + + R +LE A +F +IG VYKG ++ G ++
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66
Query: 386 AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNG 445
A+ E G E F+ E+ L+ H + L+G+C E + +L++ Y NG
Sbjct: 67 ALKRR--TPESSQGIEE--FETEIETLSFCRHPHLVSLIGFCDERN--EMILIYKYMENG 120
Query: 446 TLYEHLHYGERCQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503
L HL+ + + SW +R++I IG ARGL YLHT ++ S + L E+F
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFV 177
Query: 504 PKVS 507
PK++
Sbjct: 178 PKIT 181
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 6e-30
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 349 RFSRQELEVACEDFSNIIGSSPDSL--------VYKGTMKGGPEIAVISLCIKEEHWTGY 400
FS EL+ +F S + VYKG + +AV L + T
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEE 72
Query: 401 LELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV- 459
L+ F +E+ +A+ HEN +LLG+ + LV+ Y NG+L + L +
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
SW R KI G A G+ +LH ++ S+ + L E F+ K+S
Sbjct: 131 SWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKIS 175
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-26
Identities = 31/171 (18%), Positives = 51/171 (29%), Gaps = 20/171 (11%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++S + L+ + LQ L L + I L L L L N +
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 91
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
L+ L K+ L +G+L +L+EL++ N +Q
Sbjct: 92 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY------- 144
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244
+L+ L+ D S N L L L
Sbjct: 145 -------------FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 182
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-22
Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 32/180 (17%)
Query: 75 INISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ S+LK L L L + + L L++L + N
Sbjct: 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
P+I L L ++L L P +L SL+ L++ N +
Sbjct: 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS-LDTFP------ 513
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPST---------SFQGNC 243
L+ L+V D+S N + S + L++ PS+ F C
Sbjct: 514 --------------YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 559
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-22
Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 9/181 (4%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIG-IIPKELGLLKRLKILDLGTNQLTGP 133
++IS + + L+ L+ L + GN+ +P L+ L LDL QL
Sbjct: 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P +L+ L +N+ N L SL+ L N + + ++
Sbjct: 486 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT-SKKQELQHFPSS 544
Query: 194 IHGMYASSANLTGLCH-------LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+ + + + C + + + P + +P S C N
Sbjct: 545 LAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVLSLNITCQMN 604
Query: 247 K 247
K
Sbjct: 605 K 605
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 3e-22
Identities = 38/162 (23%), Positives = 60/162 (37%), Gaps = 8/162 (4%)
Query: 81 SLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-G 139
S KG + T L+ L L N +I + LGL ++L+ LD + L +
Sbjct: 360 SFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGL-EQLEHLDFQHSNLKQMSEFSVFL 418
Query: 140 NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199
+L L+ +++ L SLE L + N Q + N+ +
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR-NLTFLDL 477
Query: 200 SSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
S L L LS L+V + S+N F + L S
Sbjct: 478 SQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 519
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 2e-19
Identities = 36/204 (17%), Positives = 72/204 (35%), Gaps = 22/204 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTG 132
K+ ++L +G L L+EL + N + +P+ L L+ LDL +N++
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Query: 133 PIPPEIGNLTGL----VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG--- 185
++ L + + ++L N + + I L +L L N V
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQ 222
Query: 186 --SNSGYTANIHGMYASSANLT--------GLCHLSQLKVADFSYNFFVGSIP---KCLE 232
+ + G + + NL GLC+L+ + ++++ I CL
Sbjct: 223 GLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT 282
Query: 233 YLPSTSFQGNCLQNKDPKQRATTL 256
+ S S ++
Sbjct: 283 NVSSFSLVSVTIERVKDFSYNFGW 306
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 6e-17
Identities = 30/183 (16%), Positives = 48/183 (26%), Gaps = 44/183 (24%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKR--------------- 119
++ +++ + Q L L +L LKR
Sbjct: 287 FSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 344
Query: 120 ----LKILDLGTNQLT--GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHL 173
L+ LDL N L+ G T L ++L NG+ + + L LE L
Sbjct: 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDF 403
Query: 174 DRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEY 233
+ L+ L L D S+ +
Sbjct: 404 QHSNLKQMSEFSV--------------------FLSLRNLIYLDISHTHTRVAFNGIFNG 443
Query: 234 LPS 236
L S
Sbjct: 444 LSS 446
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 4e-15
Identities = 22/136 (16%), Positives = 34/136 (25%), Gaps = 24/136 (17%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA 160
N I L K LDL N L + L ++L +
Sbjct: 14 CMELNFYKIPD---NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG 70
Query: 161 ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSY 220
+L L L L N +Q + G+ LS L+
Sbjct: 71 AYQSLSHLSTLILTGNPIQS-LALGA--------------------FSGLSSLQKLVAVE 109
Query: 221 NFFVGSIPKCLEYLPS 236
+ +L +
Sbjct: 110 TNLASLENFPIGHLKT 125
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 5e-26
Identities = 21/186 (11%), Positives = 54/186 (29%), Gaps = 34/186 (18%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
++K I+ + + + ++ NN+ + K + L +L+ +G +
Sbjct: 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFV-SKAVMRLTKLRQFYMGNSPF 218
Query: 131 TGP-------------------IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEEL 171
+ NL L + + + +LP L L ++ +
Sbjct: 219 VAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLI 278
Query: 172 HLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYN-FFVGSIPKC 230
++ NR + L ++++ YN +
Sbjct: 279 NVACNRGISGEQLKDDWQ-------------ALADAPVGEKIQIIYIGYNNLKTFPVETS 325
Query: 231 LEYLPS 236
L+ +
Sbjct: 326 LQKMKK 331
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-25
Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 17/163 (10%)
Query: 88 PELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
+ + +Q + + NNL + L +K+L +L+ NQL G P G+ L
Sbjct: 299 ADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEG-KLPAFGSEIKLAS 357
Query: 147 INLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205
+NL N +T +PA G +E L N+L+ +P ++ + + + S +
Sbjct: 358 LNLAYNQITE-IPANFCGFTEQVENLSFAHNKLKY-IPNIFDAKSVSVMSAIDFSYNEIG 415
Query: 206 G------------LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + S N +
Sbjct: 416 SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSP 458
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 2e-23
Identities = 26/172 (15%), Positives = 52/172 (30%), Gaps = 25/172 (14%)
Query: 89 ELGLLTYLQELILHGNNLIGI-------IPKELGLLKRLKILDLGTNQLTGPIPPEIGNL 141
+ ++ + + N + + + + ++L NQ++
Sbjct: 397 DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTG 456
Query: 142 TGLVKINLQSNGLTG-------RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
+ L INL N LT N L + L N+L + + +
Sbjct: 457 SPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYL 515
Query: 195 HGMYASSANLTGL----CHLSQLKV------ADFSYNFFVGSIPKCLEYLPS 236
G+ S + + + S LK D N + P+ + PS
Sbjct: 516 VGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPS 567
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 1e-22
Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 22/183 (12%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTG 132
+N++ + + A G ++ L N L I + + + +D N++
Sbjct: 357 SLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGS 416
Query: 133 -------PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
P+ P + INL +N ++ L ++L N L +P
Sbjct: 417 VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE-IPKN 475
Query: 186 SNSGYTANIHGM------YASSANLTGL------CHLSQLKVADFSYNFFVGSIPKCLEY 233
S N LT L L L D SYN F P
Sbjct: 476 SLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSF-SKFPTQPLN 534
Query: 234 LPS 236
+
Sbjct: 535 SST 537
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 5e-21
Identities = 32/192 (16%), Positives = 52/192 (27%), Gaps = 36/192 (18%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-------IPKELGLLKRLKILDLG 126
IN+S + + F + L + L GN L I + L +DL
Sbjct: 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLR 496
Query: 127 TNQLTGPIPPEI--GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
N+LT + + L LV I+L N + P + N +L+ + R
Sbjct: 497 FNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRD------ 548
Query: 185 GSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF 239
A + L N K +
Sbjct: 549 --------------AQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNISVLDI 594
Query: 240 QGNCLQNKDPKQ 251
+ N + D
Sbjct: 595 KDNPNISIDLSY 606
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-19
Identities = 28/163 (17%), Positives = 50/163 (30%), Gaps = 17/163 (10%)
Query: 74 KINISGSSLKGF-------LAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDL 125
IN+ G+ L L + L N L + L L +DL
Sbjct: 461 SINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDL 520
Query: 126 GTNQLTGPIPPEIGNLTGLVKINLQ------SNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + P + N + L ++ N P + SL +L + N ++
Sbjct: 521 SYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR 579
Query: 180 GAVPAGSNSG-YTANIHGMYASSANLTGLCHLSQLKVADFSYN 221
V +I S +L+ +C + + Y+
Sbjct: 580 K-VNEKITPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYD 621
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 6e-17
Identities = 34/251 (13%), Positives = 64/251 (25%), Gaps = 60/251 (23%)
Query: 31 ALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPEL 90
+ +D + W+AL+ G
Sbjct: 20 IKLSRTAEYIKDYLALKEIWDALNGKNWSQQGFGT----------------------QPG 57
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
+ +EL + G G+ L R+ L L +G +P IG LT L + L
Sbjct: 58 ANWNFNKELDMWGA-QPGV---SLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALG 113
Query: 151 SNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
S+G P + +S E+ R Q +++ +S
Sbjct: 114 SHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQK 173
Query: 207 ----------------------------LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
+ L++L+ + FV E + +
Sbjct: 174 SIKKSSRITLKDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENI--CEAWENEN 231
Query: 239 FQGNCLQNKDP 249
+ +
Sbjct: 232 SEYAQQYKTED 242
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 2e-16
Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 10/112 (8%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQEL------ILHGNNLIGIIPKELGLLKRLKILDLGT 127
I++S +S + + L+ GN + P+ + L L L +G+
Sbjct: 517 GIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGS 575
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + + +I + ++++ N + + I L ++ Q
Sbjct: 576 NDIRK-VNEKI--TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQ 624
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 20/171 (11%)
Query: 348 VRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYF 405
V + L + V+K + +AV K
Sbjct: 12 VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNE-YVAV-----KIFPIQDKQSWQN 65
Query: 406 QREVADLARINHENTGKLLGYCRESSPFT--RMLVFDYASNGTLYEHLHYGERCQVSWTR 463
+ EV L + HEN + +G + + L+ + G+L + L VSW
Sbjct: 66 EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---ANVVSWNE 122
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISE-------LNSSAVYLTEDFSPKVS 507
I +ARGL YLH ++ + + S V L + + ++
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-25
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+F + + ++KG +G +I V L K W+ F E L +H N
Sbjct: 13 NFLTKLNENHSGELWKGRWQGN-DIVVKVL--KVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+LG C+ L+ + G+LY LH G V ++ +K + +ARG+ +LHT
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT 129
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVS 507
L P LNS +V + ED + ++S
Sbjct: 130 -LEPLIPRHALNSRSVMIDEDMTARIS 155
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-25
Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 12/186 (6%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+N++ + L+ A + L L + N + + P+ L LK+L+L N+L+
Sbjct: 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 89
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
T L +++L SN + +L L L N L G+ N+
Sbjct: 90 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS-TKLGTQVQLE-NL 147
Query: 195 HGMYASSANLTGL-------CHLSQLKVADFSYNFFVGSIPKCLEYLPS---TSFQGNCL 244
+ S+ + L S LK + S N P C + L
Sbjct: 148 QELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207
Query: 245 QNKDPK 250
+
Sbjct: 208 GPSLTE 213
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-23
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 13/189 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++ +S++ L L L N L L+ L+ L L N++
Sbjct: 101 ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160
Query: 134 IPPEIG--NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG-SNSGY 190
E+ + L K+ L SN + P + L L L+ +L ++
Sbjct: 161 KSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELA 220
Query: 191 TANIHGMYASSANLTGL-------CHLSQLKVADFSYNFFVGSIPKCLEYLPST---SFQ 240
+I + S++ L+ + L + D SYN +LP +
Sbjct: 221 NTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLE 280
Query: 241 GNCLQNKDP 249
N +Q+
Sbjct: 281 YNNIQHLFS 289
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 2e-22
Identities = 33/176 (18%), Positives = 54/176 (30%), Gaps = 14/176 (7%)
Query: 75 INISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG- 132
+++ + + L E L + E+ L N + + L+ L+ L L L
Sbjct: 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNV 469
Query: 133 -PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
P L L ++L +N + L L LE L L N L + G
Sbjct: 470 DSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPI 529
Query: 192 ANIHGM------YASSANLTGLC-----HLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ G+ S + L +LK+ D N S
Sbjct: 530 YFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVS 585
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 6e-21
Identities = 37/169 (21%), Positives = 59/169 (34%), Gaps = 12/169 (7%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L T + L L N L + +L LD+G N ++ P L L +NLQ
Sbjct: 22 DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207
N L+ +L ELHL N +Q + N+ + S L+
Sbjct: 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQK-IKNNPFVKQK-NLITLDLSHNGLSSTKLG 139
Query: 208 --CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ-----GNCLQNKDP 249
L L+ S N + L+ ++S + N ++ P
Sbjct: 140 TQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 188
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-19
Identities = 32/145 (22%), Positives = 47/145 (32%), Gaps = 20/145 (13%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-EIGNLTGLVKINLQS 151
+ L L L N + I L L++LDLG N++ + E L + +I L
Sbjct: 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS 211
N + SL+ L L R L+ V + + L
Sbjct: 440 NKYLQLTRNSFALVPSLQRLMLRRVALKN-VDSSPSP------------------FQPLR 480
Query: 212 QLKVADFSYNFFVGSIPKCLEYLPS 236
L + D S N LE L
Sbjct: 481 NLTILDLSNNNIANINDDMLEGLEK 505
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 4e-19
Identities = 37/213 (17%), Positives = 66/213 (30%), Gaps = 25/213 (11%)
Query: 44 HLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLL--TYLQELIL 101
L L+N L + ++ R L ++S S L L T L L L
Sbjct: 199 GLFLNN-VQLGPSLTEKLCLELANTSIRNL--SLSNSQLSTTSNTTFLGLKWTNLTMLDL 255
Query: 102 HGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL--- 158
NNL + L +L+ L N + + L + +NL+ + +
Sbjct: 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLA 315
Query: 159 ------PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA---------NIHGMYASSAN 203
L LE L+++ N + G + + +G ++
Sbjct: 316 SLPKIDDFSFQWLKCLEHLNMEDNDIPG-IKSNMFTGLINLKYLSLSNSFTSLRTLTNET 374
Query: 204 LTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L H S L + + + N +L
Sbjct: 375 FVSLAH-SPLHILNLTKNKISKIESDAFSWLGH 406
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 3e-18
Identities = 37/172 (21%), Positives = 54/172 (31%), Gaps = 31/172 (18%)
Query: 75 INISGSSLKGF--LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT- 131
+ + +LK L L L L NN+ I L L++L+ILDL N L
Sbjct: 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLAR 518
Query: 132 -------GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
G + L+ L +NL+SNG +L L+ + L N L +PA
Sbjct: 519 LWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNT-LPA 577
Query: 185 GSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ LK + N K
Sbjct: 578 SV--------------------FNNQVSLKSLNLQKNLITSVEKKVFGPAFR 609
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 5e-18
Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 12/175 (6%)
Query: 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT- 131
K +IS +SL L L+ L + N++ GI L LK L L + +
Sbjct: 308 TKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367
Query: 132 GPIPPEIG---NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS 188
+ E + L +NL N ++ L LE L L N + +
Sbjct: 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWR 427
Query: 189 GYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF--VGSIPKCLEYLPS 236
G NI +Y S L + L+ V S P + L +
Sbjct: 428 GLE-NIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-17
Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 9/144 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNL--------IGIIPKELGLLKRLKILDL 125
+++S +++ L L L+ L L NNL G L L L IL+L
Sbjct: 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNL 543
Query: 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
+N +L L I+L N L + N +SL+ L+L +N + V
Sbjct: 544 ESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS-VEKK 602
Query: 186 SNSGYTANIHGMYASSANLTGLCH 209
N+ + C
Sbjct: 603 VFGPAFRNLTELDMRFNPFDCTCE 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 3e-11
Identities = 21/144 (14%), Positives = 43/144 (29%), Gaps = 28/144 (19%)
Query: 119 RLKILDL---------------------GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGR 157
++ D NQL + L +++ N ++
Sbjct: 5 SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKL 64
Query: 158 LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQ 212
P L L+ L+L N L + + + T N+ ++ S ++ +
Sbjct: 65 EPELCQKLPMLKVLNLQHNELSQ-LSDKTFAFCT-NLTELHLMSNSIQKIKNNPFVKQKN 122
Query: 213 LKVADFSYNFFVGSIPKCLEYLPS 236
L D S+N + L +
Sbjct: 123 LITLDLSHNGLSSTKLGTQVQLEN 146
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 1/109 (0%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+N+ + L L+ + L NNL + LK L+L N +T
Sbjct: 541 LNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600
Query: 135 PPEIG-NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAV 182
G L +++++ N + + + E H + L
Sbjct: 601 KKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHY 649
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 1e-21
Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 27/174 (15%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
+ E L LQ L L + + P + L+ LK L + + L+ + P I +L L
Sbjct: 175 ASGEHQGLVNLQSLRLEWTGIRSL-PASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLE 232
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHL-DRNRLQGAVPAGSNSGYTANIHGMYASSANL 204
+++L+ P G L+ L L D + L +P
Sbjct: 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLD------------------- 272
Query: 205 TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS--TSFQGNCLQNKDPKQRATTL 256
+ L+QL+ D + +P + LP+ LQ + + R
Sbjct: 273 --IHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVAR 324
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-20
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL-GTNQLTGPI 134
I S L L P + L L+EL L G + P G LK L L + L +
Sbjct: 212 KIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT-L 269
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
P +I LT L K++L+ RLP+ + L + + + +
Sbjct: 270 PLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 5e-20
Identities = 34/173 (19%), Positives = 60/173 (34%), Gaps = 36/173 (20%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL-GTNQLTG 132
+ I + L L + L+ L L N L +P + L RL+ L + +LT
Sbjct: 108 HMTIDAAGLME-LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTE 165
Query: 133 PIPPEIGN---------LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
+P + + L L + L+ G+ LPA + NL +L+ L + + L A+
Sbjct: 166 -LPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALG 222
Query: 184 AGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ HL +L+ D + + P
Sbjct: 223 P---------------------AIHHLPKLEELDLRGCTALRNYPPIFGGRAP 254
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 31/177 (17%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILD--------------------LGTNQLTG 132
+ + L G+ + L +R D L
Sbjct: 11 SSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKA 70
Query: 133 PIPPEIGNLT--GLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
+ + T G V + L+S L + P + L L+ + +D L +P
Sbjct: 71 -TADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELP--DTMQQ 125
Query: 191 TANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNC 243
A + + + L L L++L+ + +P+ L ++
Sbjct: 126 FAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGL 182
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 4e-12
Identities = 17/93 (18%), Positives = 32/93 (34%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
++ G + P G L+ LIL + + +P ++ L +L+ LDL +P
Sbjct: 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168
I L I + + +
Sbjct: 295 SLIAQLPANCIILVPPHLQAQLDQHRPVARPAE 327
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-20
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 9/171 (5%)
Query: 340 DSEILKDVVRFSRQELEVACED--FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW 397
+E L ++++ D IG+ V++ G ++AV + E+ +
Sbjct: 17 TTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-DVAV--KILMEQDF 73
Query: 398 TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGER 456
F REVA + R+ H N +G + +V +Y S G+LY LH G R
Sbjct: 74 HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL--SIVTEYLSRGSLYRLLHKSGAR 131
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
Q+ RR+ + +A+G+ YLH PP L S + + + ++ KV
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVC 181
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 5e-20
Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 20/167 (11%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
I++S + LK + + LQ L L + I K L L L L N +
Sbjct: 36 NIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSF 95
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P LT L + L +G LI+L++L++ N +
Sbjct: 96 SPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY------- 148
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+L+ L D SYN+ L++L
Sbjct: 149 -------------FSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQV 182
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 8e-17
Identities = 26/107 (24%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGP 133
++IS ++ K LT L L + GN+ L LDL QL
Sbjct: 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQI 488
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
L L +N+ N L + L SL L NR++
Sbjct: 489 SWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 4e-16
Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 1/104 (0%)
Query: 76 NISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++G+S K T L L L L I L RL++L++ N L
Sbjct: 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLD 513
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
L L ++ N + SL +L N +
Sbjct: 514 SSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 6e-16
Identities = 28/165 (16%), Positives = 43/165 (26%), Gaps = 23/165 (13%)
Query: 74 KINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
++ S+LK L L L + N L L L + N
Sbjct: 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKD 462
Query: 133 PIPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+ N T L ++L L L L+ L++ N L + +
Sbjct: 463 NTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLF-LDSSH----- 516
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L D S+N S + S
Sbjct: 517 ---------------YNQLYSLSTLDCSFNRIETSKGILQHFPKS 546
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 3e-14
Identities = 31/188 (16%), Positives = 57/188 (30%), Gaps = 32/188 (17%)
Query: 80 SSLKGFLAPELGLLTYLQELILHGN-------------------------NLIGIIPKEL 114
+ KG ++ + L L L L N N I+
Sbjct: 336 TMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANF 395
Query: 115 GLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHL 173
L+ L+ LD + L +L L+ +++ L SL L +
Sbjct: 396 MGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455
Query: 174 DRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC-----HLSQLKVADFSYNFFVGSIP 228
N + + + T N+ + S L + L +L++ + S+N +
Sbjct: 456 AGNSFKDNTLSNVFANTT-NLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDS 514
Query: 229 KCLEYLPS 236
L S
Sbjct: 515 SHYNQLYS 522
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 5e-13
Identities = 28/169 (16%), Positives = 54/169 (31%), Gaps = 20/169 (11%)
Query: 74 KINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKI----LDLGTN 128
K+N++ + + L LT L + L N + I +L L+ LD+ N
Sbjct: 132 KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191
Query: 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSN 187
+ I + L ++ L+ N + + L NL L L +
Sbjct: 192 PIDF-IQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD------- 243
Query: 188 SGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + + GLC ++ + +Y L +
Sbjct: 244 -----ERNLEIFEPSIMEGLCDVTIDEF-RLTYTNDFSDDIVKFHCLAN 286
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 32/193 (16%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-------KELGL------- 116
+ + ++ ++ + L + + L G ++ + + L +
Sbjct: 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQ 321
Query: 117 -----LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT--GRLPAELGNLISLE 169
L LK L L N+ + I + L L ++L N L+ G SL
Sbjct: 322 FPTLDLPFLKSLTLTMNKGS--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLR 379
Query: 170 ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL------CHLSQLKVADFSYNFF 223
L L N + + + L + L +L D SY
Sbjct: 380 HLDLSFNGAIIMSANFMGL---EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT 436
Query: 224 VGSIPKCLEYLPS 236
L S
Sbjct: 437 KIDFDGIFLGLTS 449
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 6e-10
Identities = 18/78 (23%), Positives = 28/78 (35%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++S L+ L LQ L + NNL+ + L L LD N++
Sbjct: 478 LDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSK 537
Query: 135 PPEIGNLTGLVKINLQSN 152
L NL +N
Sbjct: 538 GILQHFPKSLAFFNLTNN 555
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 20/178 (11%)
Query: 75 INISGSSLKGFLAPELGLLTYL----QELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
+++S + ++ +L L L + N + I + +K L L L N
Sbjct: 158 VDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIK-LHELTLRGNFN 216
Query: 131 TGPIPPE-IGNLTGLVKINLQSNGLTGRL------PAELGNLISLEELHLDRNRLQGAVP 183
+ I + NL GL L P+ + L +
Sbjct: 217 SSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSD 276
Query: 184 AGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSIP----KCLEYL 234
AN+ M + ++ L + + P L+ L
Sbjct: 277 DIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSL 333
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 11/58 (18%), Positives = 19/58 (32%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+N+S ++L + L L L N + K L +L N +
Sbjct: 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 7e-20
Identities = 26/170 (15%), Positives = 42/170 (24%), Gaps = 26/170 (15%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT---- 131
I + + + L N + + + + L N +T
Sbjct: 655 KIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPE 714
Query: 132 ---GPIPPEIGNLTGLVKINLQSNGLTGRLPAEL--GNLISLEELHLDRNRLQGAVPAGS 186
P N L I+L+ N LT L + L L + + N P
Sbjct: 715 NSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS-FP--- 769
Query: 187 NSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
N + L D N + P + PS
Sbjct: 770 ------------TQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPS 807
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 8e-20
Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 19/164 (11%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
+ +I + + ++ + LT LQ + + + +
Sbjct: 426 KDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWED-----ANSDYAKQ 479
Query: 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS-- 188
NL L + L + +LP L +L L+ L++ NR A ++
Sbjct: 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR 539
Query: 189 -----GYTANIHGMYASSANLTG------LCHLSQLKVADFSYN 221
I Y NL L + +L + D +N
Sbjct: 540 LADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHN 583
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 9e-20
Identities = 26/197 (13%), Positives = 58/197 (29%), Gaps = 28/197 (14%)
Query: 44 HLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHG 103
+ S N + ++ + + + +S + ++ F + + +IL
Sbjct: 648 SVDFSY-NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSN 706
Query: 104 NNL-------IGIIPKELGLLKRLKILDLGTNQLTGPIPPEI--GNLTGLVKINLQSNGL 154
N + + L +DL N+LT + + L L +++ N
Sbjct: 707 NLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCF 765
Query: 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLK 214
+ P + N L+ + R A N I + + + L
Sbjct: 766 SS-FPTQPLNSSQLKAFGIRHQRD-----AEGN-----RILRQWPTG-----ITTCPSLI 809
Query: 215 VADFSYNFFVGSIPKCL 231
N + + L
Sbjct: 810 QLQIGSNDI-RKVDEKL 825
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 9e-17
Identities = 31/191 (16%), Positives = 49/191 (25%), Gaps = 44/191 (23%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVK 146
G L +L L N + I +++ L N+L P ++ +
Sbjct: 589 EAFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGS 648
Query: 147 INLQSNGLTGRLPAELG------NLISLEELHLDRNRLQG-------------------- 180
++ N + + I+ + L N +Q
Sbjct: 649 VDFSYNKIGS-EGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNN 707
Query: 181 ---AVPAGSNSGYTANIHGMYA------SSANLTGL------CHLSQLKVADFSYNFFVG 225
++P S N Y LT L L L D SYN F
Sbjct: 708 LMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCF-S 766
Query: 226 SIPKCLEYLPS 236
S P
Sbjct: 767 SFPTQPLNSSQ 777
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 81.8 bits (202), Expect = 2e-16
Identities = 30/199 (15%), Positives = 59/199 (29%), Gaps = 13/199 (6%)
Query: 41 EDPHLVLSNWNALDADPCHWTGIACSDARDRV-LKINISGSSLKGFLAPELGLLTYLQEL 99
+D + + W ALD + ++ + N +L + L
Sbjct: 269 KDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGL 328
Query: 100 ILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP 159
L G G +P +G L LK+L GT+ T + + +
Sbjct: 329 SLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYK 388
Query: 160 AE-LGNLISLEELHLDRNRLQ-----GAVPAGSNSGYTANIHGMYASSANLTGL----CH 209
L L L ++ + + S G + +T +
Sbjct: 389 KMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGN--LTNRITFISKAIQR 446
Query: 210 LSQLKVADFSYNFFVGSIP 228
L++L++ F+ + F
Sbjct: 447 LTKLQIIYFANSPFTYDNI 465
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 5e-12
Identities = 14/112 (12%), Positives = 36/112 (32%), Gaps = 10/112 (8%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQEL------ILHGNNLIGIIPKELGLLKRLKILDLGT 127
+++S + + + L+ GN ++ P + L L +G+
Sbjct: 757 NMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGS 815
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + + ++ L +++ N + I L ++ Q
Sbjct: 816 NDIRK-VDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 3e-11
Identities = 18/141 (12%), Positives = 44/141 (31%), Gaps = 8/141 (5%)
Query: 104 NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELG 163
+ +L R+ L L G +P IG LT L ++ ++ T
Sbjct: 309 DMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGD 368
Query: 164 NLISLEELHLDRNRLQGAVPAG-----SNSGYTANIHGMYASSANLTGLCHLSQLKVADF 218
++ + ++R++ + + + + + S++ + D
Sbjct: 369 EELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDT 428
Query: 219 SY---NFFVGSIPKCLEYLPS 236
+ I K ++ L
Sbjct: 429 QIGNLTNRITFISKAIQRLTK 449
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 3e-19
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAV---ISLCIKEEHWTGYLELYFQREVADLARIN 416
++ IG LV+KG + +A+ I + E FQREV ++ +N
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KL G P +V ++ G LY L + + W+ ++++++ IA G++
Sbjct: 82 HPNIVKLYGLMHN--PP--RMVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIE 136
Query: 477 YLHTELGPP 485
Y+ + PP
Sbjct: 137 YMQNQ-NPP 144
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 5e-19
Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 9/135 (6%)
Query: 349 RFSRQELEVACED--FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQ 406
QE ++ E +IG VY G G E+A+ + E F+
Sbjct: 22 SIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLI--DIERDNEDQLKAFK 77
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV + HEN +G C ++ TLY + + + + +
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHL--AIITSLCKGRTLYSVVR-DAKIVLDVNKTRQ 134
Query: 467 IVIGIARGLKYLHTE 481
I I +G+ YLH +
Sbjct: 135 IAQEIVKGMGYLHAK 149
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 9e-19
Identities = 32/165 (19%), Positives = 46/165 (27%), Gaps = 21/165 (12%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ S + L L L L L + I RL L L N L
Sbjct: 38 LEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMA 97
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
+ L + G++ L N +LE L+L N +
Sbjct: 98 ETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHI---------------- 141
Query: 195 HGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF 239
SS L +LKV DF N + + L +
Sbjct: 142 -----SSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATN 181
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 1e-18
Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 6/172 (3%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ ++ + L L L+ L + I L K L+ L LG+N ++
Sbjct: 86 LVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIK 145
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLE--ELHLDRNRLQGAVPAGSNSGY-- 190
P+ L ++ Q+N + ++ +L L+L+ N + G P +S
Sbjct: 146 LPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQ 205
Query: 191 TANIHGMYASSANLTGL--CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+ N G GL + L + F P E L S +
Sbjct: 206 SLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVE 257
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 2e-18
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 7/165 (4%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
V IN+ + + LQEL L + + +P L L LK L L N+
Sbjct: 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATH-LSELPSGLVGLSTLKKLVLSANKF 313
Query: 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSG 189
N L ++++ N L L NL +L EL L + ++ +
Sbjct: 314 ENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373
Query: 190 YTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPK 229
+++ + S L QL++ D ++ +
Sbjct: 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQ 418
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 31/173 (17%), Positives = 53/173 (30%), Gaps = 9/173 (5%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLT- 131
K+ +S + + L L + GN + L L+ L+ LDL + +
Sbjct: 305 KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364
Query: 132 -GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
++ NL+ L +NL N LE L L RL+
Sbjct: 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNL 424
Query: 191 TANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
+ + S + L L L+ + N F + L +
Sbjct: 425 H-LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLG 476
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 2e-15
Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 8/154 (5%)
Query: 75 INISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++ + LK A L L+ L L + L + L L+ L+L N
Sbjct: 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKG 464
Query: 134 I---PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
+ L L + L L+ +L + + L NRL + S
Sbjct: 465 NIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS-SSIEALSHL 523
Query: 191 TA---NIHGMYASSANLTGLCHLSQLKVADFSYN 221
N+ + S + L LSQ + + N
Sbjct: 524 KGIYLNLASNHISIILPSLLPILSQQRTINLRQN 557
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 2e-15
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 76 NISGSSLKGF---LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
N+ G+ L L L+ L+L +L I LK + +DL N+LT
Sbjct: 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS 514
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
+ +L G+ +NL SN ++ LP+ L L ++L +N L
Sbjct: 515 SSIEALSHLKGIY-LNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 8e-15
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 11/172 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKI--LDLGTNQLT 131
+ + + + P+ L+ L N + + +++ L++ L+L N +
Sbjct: 133 SLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGN--LISLEELHLDRNRLQGAVPAGSNSG 189
G I P + +N + L N + SL + + PA
Sbjct: 193 G-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251
Query: 190 YTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
++ + + S L+ D + +P L L +
Sbjct: 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSGLVGLST 302
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 6e-13
Identities = 19/140 (13%), Positives = 30/140 (21%), Gaps = 24/140 (17%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTG 156
+ L I L + L+ N L L L ++L +
Sbjct: 15 KTYNCENLGLNEIPG---TLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW 71
Query: 157 RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVA 216
+ L+ L L N L + + L LK
Sbjct: 72 IHEDTFQSQHRLDTLVLTANPLIF-MAETA--------------------LSGPKALKHL 110
Query: 217 DFSYNFFVGSIPKCLEYLPS 236
F L +
Sbjct: 111 FFIQTGISSIDFIPLHNQKT 130
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ +S L L + + L N L + L LK + L+L +N ++
Sbjct: 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISII 538
Query: 134 IPPEIGNLTGLVKINLQSN 152
+P + L+ INL+ N
Sbjct: 539 LPSLLPILSQQRTINLRQN 557
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 1e-18
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 13/152 (8%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ LT L L L+ N + I P L L L NQ+T P + N+T L +
Sbjct: 171 TPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSL 226
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANL 204
+ +N +T + L NL L L + N++ + + + S +++
Sbjct: 227 KIGNNKITD--LSPLANLSQLTWLEIGTNQISDINAVKDLT----KLKMLNVGSNQISDI 280
Query: 205 TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ L +LSQL + N + + L +
Sbjct: 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 2e-17
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 29/148 (19%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ I + + L L+ L L + N + I + L +LK+L++G+NQ++
Sbjct: 225 SLKIGNNKITDL--SPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI 280
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
+ NL+ L + L +N L +G L +L L L +N +
Sbjct: 281 --SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT-------------- 324
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYN 221
++ L LS++ ADF+
Sbjct: 325 ---------DIRPLASLSKMDSADFANQ 343
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 4e-17
Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 14/151 (9%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ ++ ++ L LT + L L N+ + + L + L L + +++
Sbjct: 114 ELYLNEDNISDI--SPLANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDV 170
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P I NLT L ++L N + + L +L SL N++ P + +
Sbjct: 171 TP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITPVANMT----R 222
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYN 221
++ + + +T L +LSQL + N
Sbjct: 223 LNSLKIGNNKITDLSPLANLSQLTWLEIGTN 253
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 9e-16
Identities = 30/165 (18%), Positives = 65/165 (39%), Gaps = 32/165 (19%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
++ + +S+ L + +L++ G + I + + L L+ L+L NQ+T
Sbjct: 24 GIRAVLQKASVTDV--VTQEELESITKLVVAGEKVASI--QGIEYLTNLEYLNLNGNQIT 79
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
P + NL L + + +N +T + L NL +L EL+L+ + +
Sbjct: 80 DISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDNISD----------- 124
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
++ L +L+++ + N + S L +
Sbjct: 125 ------------ISPLANLTKMYSLNLGANHNL-SDLSPLSNMTG 156
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 2e-14
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ LT L+ L + N + I L L +L L L NQL IG LT L +
Sbjct: 259 NAVKDLTKLKMLNVGSNQISDISV--LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
L N +T + L +L ++ ++
Sbjct: 317 FLSQNHITD-IRP-LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 4e-11
Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 13/129 (10%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
L + I P L L +T + L + K+ + +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA 57
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTGLCHLSQ 212
+ L +LE L+L+ N++ P + + +Y + +++ L +L+
Sbjct: 58 S--IQGIEYLTNLEYLNLNGNQITDISPLSNLV----KLTNLYIGTNKITDISALQNLTN 111
Query: 213 LKVADFSYN 221
L+ + +
Sbjct: 112 LRELYLNED 120
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 8e-10
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+N+ + + L L+ L L L+ N L + +G L L L L N +T
Sbjct: 269 MLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326
Query: 134 IPPEIGNLTGLVKINLQSNGLT 155
P + +L+ + + + +
Sbjct: 327 RP--LASLSKMDSADFANQVIK 346
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-18
Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 25/175 (14%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ SSLK LA ++EL L GN L I +L +L++L+L +N L
Sbjct: 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE- 72
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
++ +L+ L ++L +N + EL S+E LH N + V
Sbjct: 73 -TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSCSRGQ----G 121
Query: 194 IHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNC 243
+Y ++ +T L S+++ D N ++ + +
Sbjct: 122 KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE--------IDTVNFAELAASS 168
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 1e-16
Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 13/153 (8%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
EL + ++ L NN+ + + K + L N++T + G + + ++
Sbjct: 94 ELLVGPSIETLHAANNNISRV---SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150
Query: 149 LQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-- 205
L+ N + + +LE L+L N + V A + + SS L
Sbjct: 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVV---FAKLKTLDLSSNKLAFM 206
Query: 206 --GLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + N V I K L + +
Sbjct: 207 GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQN 238
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 24/149 (16%), Positives = 45/149 (30%), Gaps = 36/149 (24%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ + ++L + +K LDL N L+ ++ T L +NL SN
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
L +L +L +L L L+ N + L
Sbjct: 69 VLYE--TLDLESLSTLRTLDLNNNY--------------------------VQELLVGPS 100
Query: 213 LKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
++ + N + + + QG
Sbjct: 101 IETLHAANN--------NISRVSCSRGQG 121
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 5e-12
Identities = 21/137 (15%), Positives = 36/137 (26%), Gaps = 18/137 (13%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ L+ L L N L + E + + L N+L I + L
Sbjct: 185 KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242
Query: 148 NLQSNGLT-GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+L+ NG G L ++ + + + G +
Sbjct: 243 DLRGNGFHCGTLRDFFSKNQRVQTVAKQTVK---------------KLTGQNEEECTVPT 287
Query: 207 LCHLSQLKVADFSYNFF 223
L H D F
Sbjct: 288 LGHYGAYCCEDLPAPFA 304
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEIGNLTGL 144
+ PE + + L N L+ +I K L + L+ DL N G + +
Sbjct: 206 MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV 264
Query: 145 VKINLQSNGLTGRLPAELGNLISLEEL 171
+ Q+ E + +L
Sbjct: 265 QTVAKQTVKKLTGQNEEECTVPTLGHY 291
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 3e-18
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 348 VRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYF 405
+ + E + ++ +IG VYKG++ +AV F
Sbjct: 1 MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQ-------NF 52
Query: 406 QRE--VADLARINHENTGKLLGYCRESSPFTR---MLVFDYASNGTLYEHLHYGERCQVS 460
E + + + H+N + + + R +LV +Y NG+L ++L
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS---LHTSD 109
Query: 461 WTRRMKIVIGIARGLKYLHTELG------PPFTISELNSSAVYLTEDFSPKVS 507
W ++ + RGL YLHTEL P + +LNS V + D + +S
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 3e-18
Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
IIG VY+ G E+AV + + ++E A + H N
Sbjct: 10 TLEEIIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L G C + LV ++A G L L ++ + + IARG+ YLH
Sbjct: 69 IALRGVCLKEPNL--CLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHD 123
Query: 481 ELGPPF 486
E P
Sbjct: 124 EAIVPI 129
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 86.1 bits (213), Expect = 4e-18
Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 25/173 (14%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
++ SSLK LA ++EL L GN L I +L +L++L+L +N L
Sbjct: 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--T 73
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIH 195
++ +L+ L ++L +N + EL S+E LH N + V
Sbjct: 74 LDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSCSRGQ----GKK 123
Query: 196 GMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNC 243
+Y ++ +T L S+++ D N ++ + +
Sbjct: 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNE--------IDTVNFAELAASS 168
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 81.0 bits (200), Expect = 2e-16
Identities = 30/183 (16%), Positives = 61/183 (33%), Gaps = 25/183 (13%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-----------------KELGL 116
++++SG+ L A +L T L+ L L N L + +EL +
Sbjct: 38 ELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLV 97
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
++ L N ++ + G I L +N +T + G ++ L L N
Sbjct: 98 GPSIETLHAANNNISR-VSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154
Query: 177 RLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSIPKCLEY 233
+ V + + + + + + ++LK D S N + +
Sbjct: 155 EID-TVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLA-FMGPEFQS 212
Query: 234 LPS 236
Sbjct: 213 AAG 215
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 79.1 bits (195), Expect = 8e-16
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 36/151 (23%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
+ + ++L + +K LDL N L+ ++ T L +NL
Sbjct: 7 QNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLS 66
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
SN L +L +L +L L L+ N + L
Sbjct: 67 SNVLYE--TLDLESLSTLRTLDLNNNY--------------------------VQELLVG 98
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
++ + N + + + QG
Sbjct: 99 PSIETLHAANN--------NISRVSCSRGQG 121
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 8e-13
Identities = 25/161 (15%), Positives = 42/161 (26%), Gaps = 7/161 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ L+ L L N L + E + + L N+L I + L
Sbjct: 185 KGQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242
Query: 148 NLQSNGL-TGRLPAELGNLISLEELHLDRNR-LQGAVPAGSNSGYTANIHGMYASSANLT 205
+L+ NG G L ++ + + L G +
Sbjct: 243 DLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAP 302
Query: 206 GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
L LK + + GS E L +
Sbjct: 303 FADRLIALKRKEHALLSGQGSE---TERLECERENQARQRE 340
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 8e-08
Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 7/157 (4%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL-TGPIPPEIGNLTGL 144
+ PE + + L N L+ +I K L + L+ DL N G + +
Sbjct: 206 MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV 264
Query: 145 VKINLQSN-GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN 203
+ Q+ LTG+ E L + + +
Sbjct: 265 QTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSE 324
Query: 204 LTGL----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L + ++ + D + I + +
Sbjct: 325 TERLECERENQARQREIDALKEQYRTVIDQVTLRKQA 361
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 4e-05
Identities = 10/110 (9%), Positives = 26/110 (23%), Gaps = 6/110 (5%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILH----GNNLIGIIPKELGLLKRLKILDLGTNQL 130
+ + AP L L+ + + E R + +D Q
Sbjct: 289 GHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQY 348
Query: 131 TGPIPPEIG-NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ ++ + + + L ++ L+
Sbjct: 349 RT-VIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQI 397
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 14/107 (13%), Positives = 25/107 (23%), Gaps = 1/107 (0%)
Query: 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
+ S L E +E+ +I + + L+ L
Sbjct: 315 HALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDE 374
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ L Q+ G L L+ L R +
Sbjct: 375 QVSNGRRAHAELDGTLQQAVGQI-ELQHATEEQSPLQLLRAIVKRYE 420
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 4e-18
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+ ++G +V K + ++A+ + + E F E+ L+R+NH N
Sbjct: 11 EVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESE------RKAFIVELRQLSRVNHPNI 63
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLH 479
KL G C P LV +YA G+LY LH E + M + ++G+ YLH
Sbjct: 64 VKLYGACLN--PV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 480 TELGPPF 486
+
Sbjct: 120 SMQPKAL 126
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 1e-17
Identities = 40/180 (22%), Positives = 70/180 (38%), Gaps = 16/180 (8%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++++G+ LK L LT L +L L N + + P L L +L L LG NQ++
Sbjct: 225 ELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI 280
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + LT L + L N L + + NL +L L L N + P S +
Sbjct: 281 SP--LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLT----K 332
Query: 194 IHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIP-KCLEYLPSTSFQGNCLQNKDP 249
+ ++ + ++ L +L+ + +N P L + N
Sbjct: 333 LQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPV 392
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 31/173 (17%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ + + + L LT L L L+ N L I P + LK L L L N ++
Sbjct: 269 ELKLGANQISNI--SPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDI 324
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + +LT L ++ +N ++ + L NL ++ L N++
Sbjct: 325 SP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQIS-------------- 366
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+LT L +L+++ + + + + + N
Sbjct: 367 ---------DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGA 410
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ + + + LG+LT L EL L+GN L I L L L LDL NQ++
Sbjct: 203 SLIATNNQISDI--TPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISNL 258
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + LT L ++ L +N ++ + L L +L L L+ N+L+ P + N
Sbjct: 259 AP--LSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLEDISPISNLK----N 310
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYN 221
+ + N++ + L++L+ F N
Sbjct: 311 LTYLTLYFNNISDISPVSSLTKLQRLFFYNN 341
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 9e-15
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+IN S + L L LT L +++++ N + I P L L L L L NQ+T
Sbjct: 72 QINFSNNQLTDI--TPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI 127
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + NLT L ++ L SN ++ + L L SL++L N++ P + +
Sbjct: 128 DP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFG-NQVTDLKPLANLT----T 178
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + SS ++ L L+ L+ + N P L L +
Sbjct: 179 LERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILTN 222
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 15/153 (9%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K + +++ L + L + I + L L ++ NQLT
Sbjct: 26 KMKTVLGKTNVTDT--VSQTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLT 81
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
P + NLT LV I + +N + L NL +L L L N++ P + +
Sbjct: 82 DITP--LKNLTKLVDILMNNNQIAD--ITPLANLTNLTGLTLFNNQITDIDPLKNLT--- 134
Query: 192 ANIHGMYASSANLTG---LCHLSQLKVADFSYN 221
N++ + SS ++ L L+ L+ F
Sbjct: 135 -NLNRLELSSNTISDISALSGLTSLQQLSFGNQ 166
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 5e-10
Identities = 17/127 (13%), Positives = 39/127 (30%), Gaps = 13/127 (10%)
Query: 98 ELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGR 157
I + I L LG +T + +L + + G+
Sbjct: 6 ATITQDTPINQIFT--DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS- 60
Query: 158 LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLK 214
+ L +L +++ N+L P + + + + ++ + L +L+ L
Sbjct: 61 -IDGVEYLNNLTQINFSNNQLTDITPLKNLT----KLVDILMNNNQIADITPLANLTNLT 115
Query: 215 VADFSYN 221
N
Sbjct: 116 GLTLFNN 122
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 12/110 (10%), Positives = 27/110 (24%), Gaps = 5/110 (4%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ + + L LT + +L L+ + + T L P
Sbjct: 357 WLSAGHNQISDL--TPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAP 414
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
I + + ++ N + + G V
Sbjct: 415 A--TISDGGSYTEPDITWNLPSY-TNEVSYTFSQPVTIGKGTTTFSGTVT 461
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 2e-17
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
IG V++G +G E+AV K + + E+ + HEN
Sbjct: 46 LQESIGKGRFGEVWRGKWRGE-EVAV-----KIFSSREERSWFREAEIYQTVMLRHENIL 99
Query: 422 KLLGYC-RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLH 156
Query: 480 TELG-----PPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
E+ P +L S + + ++ + ++ L L+ S+
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 200
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-16
Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 16/137 (11%)
Query: 349 RFSRQELEVACEDFSNI-----IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL 403
R + + E+ I IGS VYKG G ++AV L T
Sbjct: 13 RDAADDWEI---PDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKML--NVTAPTPQQLQ 65
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTR 463
F+ EV L + H N +GY +V + +LY HLH E + +
Sbjct: 66 AFKNEVGVLRKTRHVNILLFMGYSTA-PQL--AIVTQWCEGSSLYHHLHASET-KFEMKK 121
Query: 464 RMKIVIGIARGLKYLHT 480
+ I ARG+ YLH
Sbjct: 122 LIDIARQTARGMDYLHA 138
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 3e-16
Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 16/164 (9%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
+G V++G+ +G +AV K + + E+ + + HEN
Sbjct: 12 LLECVGKGRYGEVWRGSWQGE-NVAV-----KIFSSRDEKSWFRETELYNTVMLRHENIL 65
Query: 422 KLLGYCRES--SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ S S L+ Y G+LY++L + ++IV+ IA GL +LH
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLH 122
Query: 480 TELGPPFTISE-----LNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
E+ L S + + ++ ++ L L+ + S
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 166
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 3e-16
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
K T + E+ V+ I+ + F +EV + + H N K +G +
Sbjct: 26 AIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL 82
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ +Y GTL + + Q W++R+ IA G+ YLH
Sbjct: 83 --NFITEYIKGGTLRGIIKSMDS-QYPWSQRVSFAKDIASGMAYLH 125
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 5e-16
Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 20/182 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++S + L+ + LQ L L + I L L L L N +
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS- 90
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ L+ L K+ L +G+L +L+EL++ N +Q +
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-SFKLPEYFSNLT 149
Query: 193 NIHGMYASSANLTGLC-----HLSQLKVA----DFSYNFFVGSIPKCLEYLPSTSFQGNC 243
N+ + SS + + L Q+ + D S N + ++ +F+
Sbjct: 150 NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP--------MNFIQPGAFKEIR 201
Query: 244 LQ 245
L
Sbjct: 202 LH 203
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 3e-15
Identities = 29/159 (18%), Positives = 46/159 (28%), Gaps = 6/159 (3%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L + L L N L + L++LDL ++ +L+ L + L
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA----NIHGMYASSANL-T 205
N + L SL++L L + N+ S L
Sbjct: 85 GNPIQSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPE 143
Query: 206 GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244
+L+ L+ D S N L L L
Sbjct: 144 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 182
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 74 KINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
++ S+LK L L L + + L L++L + N
Sbjct: 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 459
Query: 133 PIPPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
P+I L L ++L L +L +L SL+ L++ N+L+
Sbjct: 460 NFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMASNQLK 507
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 5e-13
Identities = 32/163 (19%), Positives = 48/163 (29%), Gaps = 32/163 (19%)
Query: 81 SLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-- 138
S KG + T L+ L L N +I + L++L+ LD + L +
Sbjct: 360 SFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ-MSEFSVF 417
Query: 139 GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198
+L L+ +++ L SLE L + N Q
Sbjct: 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI------------ 465
Query: 199 ASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L D S LE L T+F
Sbjct: 466 --------FTELRNLTFLDLSQCQ--------LEQLSPTAFNS 492
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPI 134
+IS + + L+ L+ L + GN+ + L+ L LDL QL +
Sbjct: 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ-L 485
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
P +L+ L +N+ SN L +P L SL+++ L N
Sbjct: 486 SPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 74 KINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
+ ++G+S + P+ L L L L L + P L L++L++ +NQL
Sbjct: 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508
Query: 133 PIPPEI-GNLTGLVKINLQSN 152
+P I LT L KI L +N
Sbjct: 509 -VPDGIFDRLTSLQKIWLHTN 528
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 31/200 (15%), Positives = 61/200 (30%), Gaps = 20/200 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILH---GNNLIGIIPKELGLLKRLKILDLGTNQL 130
+++S + ++ +L +L + L L N + I RL L L N
Sbjct: 153 HLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFD 212
Query: 131 TGPIPPE-IGNLTGLVKINLQ------SNGLTGRLPAELGNLISLEELHLDRNRLQG--- 180
+ + I L GL L L + L L +L L
Sbjct: 213 SLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLD 272
Query: 181 ---AVPAGSNSGYTANIHGMYASS-ANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + + ++ + + + L++ + + F K L+ L
Sbjct: 273 DIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRL-- 330
Query: 237 TSFQGNCLQNKDPKQRATTL 256
+F N N + +L
Sbjct: 331 -TFTSNKGGNAFSEVDLPSL 349
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
LT + L + + + L++++ Q L L ++ S
Sbjct: 281 LTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPT------LKLKSLKRLTFTS 334
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLT----G 206
N +E+ +L SLE L L RN L + S+ G T ++ + S +
Sbjct: 335 NKGGN-AFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFGTT-SLKYLDLSFNGVITMSSN 391
Query: 207 LCHLSQLKVADFSYN 221
L QL+ DF ++
Sbjct: 392 FLGLEQLEHLDFQHS 406
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 7e-16
Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 16/164 (9%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
IG V+ G +G ++AV K T + + E+ + HEN
Sbjct: 41 MVKQIGKGRYGEVWMGKWRGE-KVAV-----KVFFTTEEASWFRETEIYQTVLMRHENIL 94
Query: 422 KLLGYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ + + L+ DY NG+LY++L + +K+ GL +LH
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYLK---STTLDAKSMLKLAYSSVSGLCHLH 151
Query: 480 TELGPPFTISE-----LNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
TE+ L S + + ++ + ++ L L+ +S
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD 195
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 2e-15
Identities = 36/175 (20%), Positives = 54/175 (30%), Gaps = 44/175 (25%)
Query: 85 FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL--- 141
F+ P T+LQE + H +NL +P E +K ++ PP G
Sbjct: 2 FINPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREM 60
Query: 142 ----------TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
++ L + GL+ LP + LE L N L +P
Sbjct: 61 AVSRLRDCLDRQAHELELNNLGLS-SLPELPPH---LESLVASCNSLT-ELPE------- 108
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
L L V + + +P LEYL N L+
Sbjct: 109 --------------LPQSLKSLLVDNNNLKAL-SDLPPLLEYL---GVSNNQLEK 145
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 2e-14
Identities = 37/192 (19%), Positives = 67/192 (34%), Gaps = 46/192 (23%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP---------------P 136
L +L+ L+ N+L +P+ LK L + + L+ P P
Sbjct: 89 LPPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLP 147
Query: 137 EIGNLTGLVKINLQSNGLTGRLPAEL-------------------GNLISLEELHLDRNR 177
E+ N + L I++ +N L +LP NL L ++ D N
Sbjct: 148 ELQNSSFLKIIDVDNNSLK-KLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNS 206
Query: 178 LQGAVPAGSNSGYTANIHGMYASSANLT---GLCHLSQLKVADFSYNFFVGSIPKCLEYL 234
L+ +P ++ + A + L L +L L N ++P L
Sbjct: 207 LK-KLPDLP-----LSLESIVAGNNILEELPELQNLPFLTTIYADNNLLK-TLPDLPPSL 259
Query: 235 PSTSFQGNCLQN 246
+ + + N L +
Sbjct: 260 EALNVRDNYLTD 271
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 4e-13
Identities = 39/178 (21%), Positives = 63/178 (35%), Gaps = 32/178 (17%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
PEL ++L+ + + N+L +P L+ + G NQL PE+ NL L I
Sbjct: 147 PELQNSSFLKIIDVDNNSLK-KLPDLPP---SLEFIAAGNNQLE--ELPELQNLPFLTAI 200
Query: 148 NLQSNGLTG------------------RLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
+N L EL NL L ++ D N L+ +P
Sbjct: 201 YADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLK-TLPDLP--- 256
Query: 190 YTANIHGMYASSANLTGL-CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
++ + LT L L D S N F + + L + N +++
Sbjct: 257 --PSLEALNVRDNYLTDLPELPQSLTFLDVSENIF-SGLSELPPNLYYLNASSNEIRS 311
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L L L N + + L L+ L++ N+L +P L ++
Sbjct: 295 LPPNLYYLNASSNEIRSLC----DLPPSLEELNVSNNKLIE-LPALPPRLE---RLIASF 346
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQ 179
N L +P N L++LH++ N L+
Sbjct: 347 NHLA-EVPELPQN---LKQLHVEYNPLR 370
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 8e-10
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 25/105 (23%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L L+EL + N LI +P RL+ L N L +P NL L +++
Sbjct: 314 DLPPSLEELNVSNNKLI-ELPALPP---RLERLIASFNHLAE-VPELPQNLKQL---HVE 365
Query: 151 SNGLTGRLPAELGNLI----------------SLEELHLDRNRLQ 179
N L P ++ +L++LH++ N L+
Sbjct: 366 YNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR 409
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 6e-07
Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 21/103 (20%)
Query: 92 LLTYLQELILHGNNLIGIIPKELG----------------LLKRLKILDLGTNQLTGPIP 135
L L++L + N L P L + LK L + TN L P
Sbjct: 355 LPQNLKQLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE-FP 412
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
++ L + S + LE+ + +
Sbjct: 413 DIPESVEDL---RMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 33/169 (19%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++I + + E L + + + + + L +++++L+L Q+ I
Sbjct: 26 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-I 84
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ K+ + N + LP N+ L L L+RN L ++P G
Sbjct: 85 DTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGI------ 136
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ +L S N LE + +FQ
Sbjct: 137 --------------FHNTPKLTTLSMSNNN--------LERIEDDTFQA 163
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 3e-14
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L E+ L N L I+ ++RL+ L + N+L + + L +
Sbjct: 242 AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 300
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
+L N L + LE L+LD N + + ++
Sbjct: 301 DLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHT 340
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 7e-13
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 8/152 (5%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ S+++ A L ++ L L+ + I ++ L +G N +
Sbjct: 49 IVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY- 107
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+PP + N+ L + L+ N L+ LP + N L L + N L+ + + T
Sbjct: 108 LPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQA-T 164
Query: 192 ANIHGMYASSANLTGL--CHLSQLKVADFSYN 221
++ + SS LT + + L A+ SYN
Sbjct: 165 TSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 8e-13
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L+ L + N + + + LK+LDL N L + L + L N
Sbjct: 271 MQRLERLYISNNR-LVALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHN 328
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQ 179
+ L L +L+ L L N
Sbjct: 329 SIV-TLK--LSTHHTLKNLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 37/159 (23%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
L + ++EL N+ I ++ + L IL L N LT + N GLV+++
Sbjct: 200 TLAIPIAVEELDASHNS-INVVRG--PVNVELTILKLQHNNLTD--TAWLLNYPGLVEVD 254
Query: 149 LQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
L N L ++ + LE L++ NRL ++
Sbjct: 255 LSYNELE-KIMYHPFVKMQRLERLYISNNRLV-------------ALNLY---------G 291
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+ LKV D S+N L ++ Q + L+N
Sbjct: 292 QPIPTLKVLDLSHNH--------LLHVERNQPQFDRLEN 322
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 21/139 (15%), Positives = 43/139 (30%), Gaps = 17/139 (12%)
Query: 110 IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISL 168
I L + + E L + +++ + +LPA L + +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQV 71
Query: 169 EELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF 223
E L+L+ +++ + + + I +Y + L ++ L V N
Sbjct: 72 ELLNLNDLQIE-EIDTYAFAYAH-TIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERND- 128
Query: 224 VGSIPKCLEYLPSTSFQGN 242
L LP F
Sbjct: 129 -------LSSLPRGIFHNT 140
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 33/169 (19%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++I + + E L + + + + + L +++++L+L Q+ I
Sbjct: 32 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-I 90
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ K+ + N + LP N+ L L L+RN L ++P G
Sbjct: 91 DTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGI------ 142
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ +L S N LE + +FQ
Sbjct: 143 --------------FHNTPKLTTLSMSNNN--------LERIEDDTFQA 169
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 73.8 bits (181), Expect = 4e-14
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L E+ L N L I+ ++RL+ L + N+L + + L +
Sbjct: 248 AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 306
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
+L N L + LE L+LD N + + ++
Sbjct: 307 DLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHT 346
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 8e-14
Identities = 36/152 (23%), Positives = 51/152 (33%), Gaps = 24/152 (15%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L + NNL I L+ L L +N+LT + + L N+ N
Sbjct: 146 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VDL--SLIPSLFHANVSYN 202
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT---GLCH 209
L+ L I++EEL N + V N + + NLT L +
Sbjct: 203 LLS-----TLAIPIAVEELDASHNSIN-VVRGPVNV----ELTILKLQHNNLTDTAWLLN 252
Query: 210 LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L D SYN LE + F
Sbjct: 253 YPGLVEVDLSYNE--------LEKIMYHPFVK 276
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 69.6 bits (170), Expect = 1e-12
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L+ L + N + + + LK+LDL N L + L + L N
Sbjct: 277 MQRLERLYISNNR-LVALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHN 334
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQ 179
+ L L +L+ L L N
Sbjct: 335 SIV-TLK--LSTHHTLKNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 7e-11
Identities = 32/152 (21%), Positives = 53/152 (34%), Gaps = 17/152 (11%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
+L L+ L + N L L + ++ LD N + + + L +
Sbjct: 187 DLSLIPSLFHANVSYNLL-----STLAIPIAVEELDASHNSINV-VRGPV--NVELTILK 238
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
LQ N LT L N L E+ L N L+ + + +Y S+ L L
Sbjct: 239 LQHNNLT-DTAW-LLNYPGLVEVDLSYNELE-KIMYHPFVK-MQRLERLYISNNRLVALN 294
Query: 208 ---CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ LKV D S+N + + +
Sbjct: 295 LYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 325
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
L + L+ L L N+L+ + + RL+ L L N + + L
Sbjct: 293 LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKL--STHHTLK 348
Query: 146 KINLQSNGLTG-RLPAELGNLISLEELHLDRN 176
+ L N L A N+ D++
Sbjct: 349 NLTLSHNDWDCNSLRALFRNVARPAVDDADQH 380
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 1e-14
Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 24/132 (18%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
+ +++L ++ + P + L L+ L + +T P + LT L +++
Sbjct: 62 IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
+ + ++ L + + L N ++ L
Sbjct: 120 SHSAHDDSILTKINTLPKVNSIDLSYNGA----------------------ITDIMPLKT 157
Query: 210 LSQLKVADFSYN 221
L +LK + ++
Sbjct: 158 LPELKSLNIQFD 169
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 3e-13
Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 26/144 (18%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L + L N+ + + +K L + T P I L+ L ++ +
Sbjct: 43 MNSLTYITLANINVTDL--TGIEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGK 98
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
+T L L SL L + + + LT + L +
Sbjct: 99 DVTSDKIPNLSGLTSLTLLDISHSAH---------------------DDSILTKINTLPK 137
Query: 213 LKVADFSYNFFVGSIPKCLEYLPS 236
+ D SYN + I L+ LP
Sbjct: 138 VNSIDLSYNGAITDI-MPLKTLPE 160
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-12
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ I G + P L LT L L + + I ++ L ++ +DL N
Sbjct: 92 RLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD 151
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
I P + L L +N+Q +G+ + + L +L+ + G
Sbjct: 152 IMP-LKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGG 195
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 2e-14
Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 13/171 (7%)
Query: 76 NISGSSLKGFLAPELGLL-TYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
N+S ++ +LA L L+ L + + + +++ + L LDL N G
Sbjct: 130 NVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189
Query: 135 PPEI----GNLTGLVKINLQSNGLT---GRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
L + L++ G+ G A + L+ L L N L+ +
Sbjct: 190 GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRD-AAGAPS 248
Query: 188 SGYTANIHGMYASSANLTGL--CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + ++ + S L + ++L V D SYN P E LP
Sbjct: 249 CDWPSQLNSLNLSFTGLKQVPKGLPAKLSVLDLSYNRL-DRNPSPDE-LPQ 297
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 1e-10
Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 16/164 (9%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIG-------IIPKELGLLKRLKILDLG 126
++I+ + F ++ + L L L N +G + P + L+ L + + G
Sbjct: 153 VLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+G L ++L N L A L L+L L+ VP G
Sbjct: 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271
Query: 186 SNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226
+ + + S L L Q+ N F+ S
Sbjct: 272 LPA----KLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 9e-08
Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 18/179 (10%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL--KRLKILDLGTNQLTG 132
I L G L + ++ LQEL L + G P L L IL+L
Sbjct: 78 ARIPSRILFGAL--RVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT 135
Query: 133 --PIPPEIGNL--TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGS 186
E+ GL +++ ++ +L L L N G + +
Sbjct: 136 RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195
Query: 187 NSGYTANIHGMYASSANLTGL--------CHLSQLKVADFSYNFFVGSIPKCLEYLPST 237
+ + +A + QL+ D S+N + PS
Sbjct: 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 3e-05
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 14/145 (9%)
Query: 98 ELILHGNNLIGIIPKELGLLKRLKI--LDLGTNQLTGPIPP---EIGNLTGLVKINLQSN 152
E +L + + + ++K L + L + ++ I + ++GL ++ L++
Sbjct: 46 EYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENL 105
Query: 153 GLTGRLPAELGNLI--SLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTGL- 207
+TG P L L L+L A A + + + A+
Sbjct: 106 EVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFS 165
Query: 208 ----CHLSQLKVADFSYNFFVGSIP 228
L D S N +G
Sbjct: 166 CEQVRVFPALSTLDLSDNPELGERG 190
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 3e-14
Identities = 37/156 (23%), Positives = 57/156 (36%), Gaps = 9/156 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L + L+L N + + L++L++L+LG+ I E NL L ++L S
Sbjct: 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207
+ + L + L L EL L L AV + + S + L
Sbjct: 83 SKIY-FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLH 141
Query: 208 ---CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
L+ LK DFS N LE L +
Sbjct: 142 PSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLS 177
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 7e-13
Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 5/165 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
+ ++ L L + + + LK LK+L+L N++ I E L L +NL
Sbjct: 265 RSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINK-IADEAFYGLDNLQVLNLSY 323
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS 211
N L + L + + L +N + + + + + LT + +
Sbjct: 324 NLLGELYSSNFYGLPKVAYIDLQKNHIA-IIQDQTFKFLE-KLQTLDLRDNALTTIHFIP 381
Query: 212 QLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTL 256
+ S N V ++PK N L+N D +
Sbjct: 382 SIPDIFLSGNKLV-TLPKINLTANLIHLSENRLENLDILYFLLRV 425
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 34/159 (21%), Positives = 50/159 (31%), Gaps = 29/159 (18%)
Query: 93 LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI-----GNLTGLVK 146
+ +LQ LIL+ N + L+ L LG N L E+ L+ L
Sbjct: 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQV 484
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ L N L P +L +L L L+ NRL L+
Sbjct: 485 LYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-----------------------VLSH 521
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
+ L++ D S N + P L N
Sbjct: 522 NDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFI 560
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 14/181 (7%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
V +++S + + L L+ L L N + I + L L++L+L N L
Sbjct: 268 VRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG 327
Query: 132 GPIPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
+ L + I+LQ N + L L+ L L N L + +
Sbjct: 328 E-LYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL-------TTIHF 379
Query: 191 TANIHGMYASSANLTGLCHLS-QLKVADFSYNFF----VGSIPKCLEYLPSTSFQGNCLQ 245
+I ++ S L L ++ + S N + + +L N
Sbjct: 380 IPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFS 439
Query: 246 N 246
+
Sbjct: 440 S 440
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 6e-07
Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 32/156 (20%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVKI 147
+ + + ++ L GN L+ + L ++ L N+L I + + L +
Sbjct: 376 TIHFIPSIPDIFLSGNKLVTLPKINL----TANLIHLSENRLENLDILYFLLRVPHLQIL 431
Query: 148 NLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205
L N + + SLE+L L N + + +
Sbjct: 432 ILNQNRFS-SCSGDQTPSENPSLEQLFLGEN----------------MLQLAWETELCWD 474
Query: 206 GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
LS L+V ++N+ L LP F
Sbjct: 475 VFEGLSHLQVLYLNHNY--------LNSLPPGVFSH 502
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 4e-06
Identities = 36/178 (20%), Positives = 60/178 (33%), Gaps = 26/178 (14%)
Query: 74 KINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLL--KRLKILDLGTNQL 130
++++S + ++ L P G L L+ + N + + EL L K L L N L
Sbjct: 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSL 186
Query: 131 TGPIPPEIGNLTG------LVKINLQSNGLTGRLPAELGNLIS-LEELHLDRNRLQGAVP 183
+ + G L +++ NG T + N IS + L
Sbjct: 187 YSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246
Query: 184 AGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
G + NI GL S ++ D S+ F + L S F+
Sbjct: 247 FGFH-----NIKDP--DQNTFAGLARSS-VRHLDLSHGF--------VFSLNSRVFET 288
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 13/140 (9%)
Query: 44 HLVLSNWNALDADPCHWTGIACSD-ARDRVLKI---NISGSSLKGFLAPELGLLTYLQEL 99
L+L+ N + T S+ L + + + L++LQ L
Sbjct: 430 ILILNQ-NRFSSCSGDQT---PSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVL 485
Query: 100 ILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP 159
L+ N L + P L L+ L L +N+LT + L +++ N L P
Sbjct: 486 YLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTV-LSHND-LPANLEILDISRNQLLAPNP 543
Query: 160 AELGNLISLEELHLDRNRLQ 179
+SL L + N+
Sbjct: 544 ---DVFVSLSVLDITHNKFI 560
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 5e-14
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 13/153 (8%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEI-GNLTGLVKIN 148
+ LQEL +H N + + L ++ +++LGTN L I + L I
Sbjct: 118 KMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
+ +T +P L SL ELHLD N++ V A S G N+ + S +++ +
Sbjct: 178 IADTNIT-TIPQGL--PPSLTELHLDGNKIT-KVDAASLKGLN-NLAKLGLSFNSISAVD 232
Query: 209 -----HLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ L+ + N V +P L
Sbjct: 233 NGSLANTPHLRELHLNNNKLV-KVPGGLADHKY 264
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL L EL L GN + + L L L L L N ++ + N L +++L
Sbjct: 189 GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA-VDNGSLANTPHLRELHL 247
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+N L ++P L + ++ ++L N + A+ +
Sbjct: 248 NNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGSND 282
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L LIL N + I P L +L+ L L NQL +P ++ L ++ + N
Sbjct: 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKM--PKTLQELRVHEN 131
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQ 179
+T + L + + L N L+
Sbjct: 132 EITKVRKSVFNGLNQMIVVELGTNPLK 158
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 8e-11
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L +L L N++ + L L+ L L N+L +P + + + + L +N
Sbjct: 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNN 273
Query: 153 GLTG------RLPAELGNLISLEELHLDRNRLQ 179
++ P S + L N +Q
Sbjct: 274 NISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 22/147 (14%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L L L N + I + LK L L L N+++ I P L L ++ L
Sbjct: 49 DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK-ISPGAFAPLVKLERLYL 107
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
N L LP ++ +L+EL + N + V +G + +
Sbjct: 108 SKNQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLN-----------QMIVV-E 151
Query: 210 LS--QLKVADFSYNFFVGSIPKCLEYL 234
L LK + F G K L Y+
Sbjct: 152 LGTNPLKSSGIENGAFQGM--KKLSYI 176
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 8e-10
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG------PIPPEIGNLTGLVK 146
+L+EL L+ N L+ +P L K ++++ L N ++ P
Sbjct: 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSG 297
Query: 147 INLQSNGLT-GRLPAEL-GNLISLEELHLDRNR 177
++L SN + + + + L +
Sbjct: 298 VSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 73.1 bits (179), Expect = 8e-14
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL----VKI 147
L T L+ L + N L +P+ L + L+ LD+ TN L +P +
Sbjct: 158 LPTSLEVLSVRNNQL-TFLPE---LPESLEALDVSTNLLES-LPAVPVRNHHSEETEIFF 212
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ N +T +P + +L + L+ N L
Sbjct: 213 RCRENRIT-HIPENILSLDPTCTIILEDNPLS 243
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 4e-11
Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 17/161 (10%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
+ N + ++ + L+ + L L L+ +P + +
Sbjct: 29 YFSAWDKWEKQALPGENRNEAVSLLKE--CLINQFSELQLNRLNLSS-LPDNLP--PQIT 83
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205
+ + N L LP + LE L NRL +P A++ + + LT
Sbjct: 84 VLEITQNALI-SLPELPAS---LEYLDACDNRLS-TLPELP-----ASLKHLDVDNNQLT 133
Query: 206 GLCHL-SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
L L + L+ + N +P+ L S + N L
Sbjct: 134 MLPELPALLEYINADNNQLT-MLPELPTSLEVLSVRNNQLT 173
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 6e-11
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 6/91 (6%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLK----ILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L+ L + N L + P + N++T IP I +L I
Sbjct: 178 LPESLEALDVSTNLLESL-PAVPVRNHHSEETEIFFRCRENRITH-IPENILSLDPTCTI 235
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
L+ N L+ R+ L + + H R
Sbjct: 236 ILEDNPLSSRIRESLSQQTAQPDYHGPRIYF 266
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Query: 86 LAPELGLLTYLQELILH---GNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT 142
L + +E + N I IP+ + L + L N L+ I + T
Sbjct: 195 LPAVPVRNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254
Query: 143 GLVKINLQSNGLT 155
+ +
Sbjct: 255 AQPDYHGPRIYFS 267
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 3e-13
Identities = 27/153 (17%), Positives = 43/153 (28%), Gaps = 31/153 (20%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEI-GNLTGLVKIN 148
G+ + L L N L + L +L L L +N L+ + T L ++
Sbjct: 25 GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
L NG+ + + L LE L + L+
Sbjct: 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSV--------------------FL 123
Query: 209 HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L D S+ + F G
Sbjct: 124 SLRNLIYLDISHTH--------TRVAFNGIFNG 148
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 6e-11
Identities = 26/151 (17%), Positives = 45/151 (29%), Gaps = 32/151 (21%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L + + L L++L + N P+I L L ++L
Sbjct: 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 184
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
L +L +L SL+ L++ N ++ L
Sbjct: 185 CQLE-QLSPTAFNSLSSLQVLNMSHNNFF-SLDTFP--------------------YKCL 222
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ L+V D+S N + Q
Sbjct: 223 NSLQVLDYSLNH--------IMTSKKQELQH 245
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
Query: 75 INISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ ++G+S + P+ L L L L L + P L L++L++ N
Sbjct: 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS- 213
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLI-SLEELHLDRNRLQ 179
+ L L ++ N + EL + SL L+L +N
Sbjct: 214 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 70.7 bits (173), Expect = 4e-13
Identities = 33/155 (21%), Positives = 48/155 (30%), Gaps = 19/155 (12%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L L + + L +P L + L + N LT +P L L +
Sbjct: 38 LNNGNAVLNVGESGL-TTLPDCLP--AHITTLVIPDNNLTS-LPALPPELRTL---EVSG 90
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-CHL 210
N LT LP L+ L L A+P + + ++ LT L
Sbjct: 91 NQLT-SLPVLPPGLLELSIFSNPLTHLP-ALP--------SGLCKLWIFGNQLTSLPVLP 140
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
L+ S N S+P L N L
Sbjct: 141 PGLQELSVSDNQL-ASLPALPSELCKLWAYNNQLT 174
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 69.2 bits (169), Expect = 1e-12
Identities = 38/162 (23%), Positives = 57/162 (35%), Gaps = 22/162 (13%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L + LQEL + N L +P L +L + N+LT +P L L +
Sbjct: 179 LPSGLQELSVSDNQLA-SLPTLPSELYKLWAYN---NRLT-SLPALPSGLKEL---IVSG 230
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT----GL 207
N LT LP L+EL + NRL ++P + + + LT L
Sbjct: 231 NRLT-SLPVLPSE---LKELMVSGNRLT-SLPMLPS-----GLLSLSVYRNQLTRLPESL 280
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDP 249
HLS + N + L + S + D
Sbjct: 281 IHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDM 322
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 65.7 bits (160), Expect = 2e-11
Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 37/198 (18%)
Query: 64 ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKIL 123
AC + + VL N+ S L P+ L ++ L++ NNL +P L+ L
Sbjct: 36 ACLNNGNAVL--NVGESGLTTL--PD-CLPAHITTLVIPDNNLT-SLPALPP---ELRTL 86
Query: 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTG----------------RLPAELGNLIS 167
++ NQLT +P L L + L LP
Sbjct: 87 EVSGNQLTS-LPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPG--- 142
Query: 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-CHLSQLKVADFSYNFFVGS 226
L+EL + N+L ++PA + + ++A + LT L S L+ S N S
Sbjct: 143 LQELSVSDNQLA-SLPALP-----SELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLA-S 195
Query: 227 IPKCLEYLPSTSFQGNCL 244
+P L N L
Sbjct: 196 LPTLPSELYKLWAYNNRL 213
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 2e-11
Identities = 41/188 (21%), Positives = 59/188 (31%), Gaps = 46/188 (24%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG----------------PIP 135
L L+ L + GN L +P L L I L +P
Sbjct: 79 LPPELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLP 137
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLI-----------------SLEELHLDRNRL 178
L L ++ N L LPA L L+EL + N+L
Sbjct: 138 VLPPGLQEL---SVSDNQLA-SLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQL 193
Query: 179 QGAVPAGSNSGYTANIHGMYASSANLTGL-CHLSQLKVADFSYNFFVGSIPKCLEYLPST 237
++P + ++ ++A + LT L S LK S N S+P L
Sbjct: 194 A-SLPTLP-----SELYKLWAYNNRLTSLPALPSGLKELIVSGNRL-TSLPVLPSELKEL 246
Query: 238 SFQGNCLQ 245
GN L
Sbjct: 247 MVSGNRLT 254
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 6e-06
Identities = 20/101 (19%), Positives = 31/101 (30%), Gaps = 10/101 (9%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L + L L ++ N L + P+ L L ++L N L+ + +T S
Sbjct: 259 LPSGLLSLSVYRNQLTRL-PESLIHLSSETTVNLEGNPLSERTLQALREITSA---PGYS 314
Query: 152 NGLT------GRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+ P E L L R PA
Sbjct: 315 GPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADR 355
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 5e-13
Identities = 37/158 (23%), Positives = 54/158 (34%), Gaps = 18/158 (11%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ Q + LHGN + + + L IL L +N L I L L +++L
Sbjct: 29 GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLAR-IDAAAFTGLALLEQLDL 87
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
N + L L LHLDR LQ + G G + +Y L L
Sbjct: 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLA-ALQYLYLQDNALQALP 145
Query: 208 ----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L N + +P +F+G
Sbjct: 146 DDTFRDLGNLTHLFLHGNR--------ISSVPERAFRG 175
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 6e-11
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L L L + P L L+ L L N L +P + +L L + L
Sbjct: 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHG 162
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAG 185
N ++ +P L SL+ L L +NR+ V
Sbjct: 163 NRIS-SVPERAFRGLHSLDRLLLHQNRVA-HVHPH 195
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 9e-10
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L LHGN + + + L L L L N++ + P +L L+ + L +
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH-VHPHAFRDLGRLMTLYLFA 210
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRN 176
N L+ LP E L L +L+ L L+ N
Sbjct: 211 NNLS-ALPTEALAPLRALQYLRLNDN 235
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 6e-13
Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 17/158 (10%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL ++ L L N + I +L L+ L L +N + I + +L L ++L
Sbjct: 49 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT-IEEDSFSSLGSLEHLDL 107
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
N L+ L + L SL L+L N + S T + T +
Sbjct: 108 SYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ 166
Query: 209 -----HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L+ L+ + + L+ S +
Sbjct: 167 RKDFAGLTFLEELEIDAS--------DLQSYEPKSLKS 196
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 18/159 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQ 150
L+ L L L GN + L L +L+IL +G I + LT L ++ +
Sbjct: 123 LSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182
Query: 151 SNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA----NIHGMYASSANLT 205
++ L + L ++ ++ L L + + ++ + + + +
Sbjct: 183 ASDLQ-SYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFS 240
Query: 206 --------GLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L + + + K L +
Sbjct: 241 ELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISG 278
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 4e-09
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 10/101 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI--------GNLTGL 144
+ + LILH I ++ + + ++ L+L L E+
Sbjct: 197 IQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTF 256
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
+ + L ++ L + L EL RN+L+ VP G
Sbjct: 257 RNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKS-VPDG 295
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 11/96 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKEL--------GLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
+ ++ L L +L EL + + + L + + ++GL
Sbjct: 221 TSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGL 279
Query: 145 VKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
+++ N L +P L SL+++ L N
Sbjct: 280 LELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 6e-05
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148
L + + + +L + K L + L L+ NQL +P I LT L KI
Sbjct: 250 LIKKFTFRNVKITDESLFQV-MKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIW 307
Query: 149 LQSN 152
L +N
Sbjct: 308 LHTN 311
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 9e-13
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 17/173 (9%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++ + +K E +L+EL L+ N + + P L L+ L L +N+L I
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL-I 95
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + L+ L K+++ N + L +L +L+ L + N L + + SG +
Sbjct: 96 PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLN-S 153
Query: 194 IHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ + NLT + HL L V + + + SF+
Sbjct: 154 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLN--------INAIRDYSFKR 198
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 1e-12
Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 17/156 (10%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L L L N+ I L RLK+L++ + P L +++
Sbjct: 175 LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC 234
Query: 153 GLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---- 207
LT +P + +L+ L L+L N + + + + L +
Sbjct: 235 NLT-AVPYLAVRHLVYLRFLNLSYNPIS-TIEGSMLHELL-RLQEIQLVGGQLAVVEPYA 291
Query: 208 -CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGN 242
L+ L+V + S N L L + F
Sbjct: 292 FRGLNYLRVLNVSGN--------QLTTLEESVFHSV 319
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-11
Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 19/158 (12%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ T + L L N + + E L+ L+L N ++ + P NL L + L
Sbjct: 29 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSA-VEPGAFNNLFNLRTLGL 87
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
+SN L +P L +L +L + N++ + N+ + +L +
Sbjct: 88 RSNRLK-LIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLY-NLKSLEVGDNDLVYIS 144
Query: 208 ----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L+ L+ L +P+ +
Sbjct: 145 HRAFSGLNSLEQLTLEKC--------NLTSIPTEALSH 174
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 1e-11
Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 17/155 (10%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+ L + N+L+ I + L L+ L L LT IP E +L GL+ + L+
Sbjct: 127 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRH 185
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---- 207
+ L L+ L + + G N+ + + NLT +
Sbjct: 186 LNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG--LNLTSLSITHCNLTAVPYLA 243
Query: 208 -CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
HL L+ + SYN + + +
Sbjct: 244 VRHLVYLRFLNLSYN--------PISTIEGSMLHE 270
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 2e-10
Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 5/113 (4%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
IS + P L L + NL + + L L+ L+L N ++ I
Sbjct: 206 EISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST-IE 264
Query: 136 PEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
+ L L +I L L + L L L++ N+L +
Sbjct: 265 GSMLHELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGNQLT-TLEESV 315
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 4e-09
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 44 HLVLSNWNALDA-DPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILH 102
L +S+W LD P G+ + ++I+ +L + L YL+ L L
Sbjct: 204 VLEISHWPYLDTMTPNCLYGL-------NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLS 256
Query: 103 GNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGRLPAE 161
N + I L L RL+ + L QL + P L L +N+ N LT L
Sbjct: 257 YNPISTIEGSMLHELLRLQEIQLVGGQLAV-VEPYAFRGLNYLRVLNVSGNQLT-TLEES 314
Query: 162 L-GNLISLEELHLDRNRLQ 179
+ ++ +LE L LD N L
Sbjct: 315 VFHSVGNLETLILDSNPLA 333
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 1e-12
Identities = 32/159 (20%), Positives = 57/159 (35%), Gaps = 19/159 (11%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL ++ L L N + I +L L++L L ++++ I + +L L ++L
Sbjct: 23 GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINT-IEGDAFYSLGSLEHLDL 81
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-- 206
N L+ L + G L SL+ L+L N Q + S N+ + +
Sbjct: 82 SDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQ-TLGVTSLFPNLTNLQTLRIGNVETFSEI 139
Query: 207 ----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L+ L + L S S +
Sbjct: 140 RRIDFAGLTSLNELEIKALS--------LRNYQSQSLKS 170
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 1e-12
Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 11/179 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++I L L+ LL ++ + + + + + LK L+ LDL N +
Sbjct: 290 RLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEE 349
Query: 134 IPPE---IGNLTGLVKINLQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNS 188
G L + L N L + L L +L L + RN +P
Sbjct: 350 YLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQW 408
Query: 189 GYTANIHGMYASSANLTGL--CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
+ + SS + + C L+V D S N S L L N L+
Sbjct: 409 --PEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNL-DSFSLFLPRLQELYISRNKLK 464
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 25/174 (14%), Positives = 48/174 (27%), Gaps = 13/174 (7%)
Query: 75 INISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTG 132
+N+ G+ + LT LQ L + I + L L L++ L
Sbjct: 103 LNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ ++ + + L + L L S+ L L L
Sbjct: 163 YQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR-FQFSPLPVDEV 221
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+ + + D S+N + + + + L F L
Sbjct: 222 S---------SPMKKLAFRGSVLTDESFNELL-KLLRYILELSEVEFDDCTLNG 265
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 23/147 (15%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
++ L + L + LL+++K + + +++ +L L ++L N
Sbjct: 285 TVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSEN 344
Query: 153 GLT---GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
+ + A G SL+ L L +N L+ ++ L
Sbjct: 345 LMVEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQKTGEI------------------LLT 385
Query: 210 LSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L D S N F +P ++
Sbjct: 386 LKNLTSLDISRNTF-HPMPDSCQWPEK 411
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 9/104 (8%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
N+S + ++ + + L+ L + NNL L RL+ L + N+L
Sbjct: 416 NLSSTGIRVV---KTCIPQTLEVLDVSNNNLDSFSLF----LPRLQELYISRNKLK--TL 466
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
P+ L+ + + N L L SL+++ L N
Sbjct: 467 PDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 8e-08
Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 5/154 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
LT L EL + +L + L ++ + L L ++ + L+ + + L+
Sbjct: 147 LTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
L + L + R + S + + + S C L+
Sbjct: 207 NLARFQFSPLPVDEVSSPMKKLAFRGSV-LTDESFNELLKLLRYILELSEVEFDDCTLNG 265
Query: 213 LKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
L + S + + L + + + + +
Sbjct: 266 LGDFNPSES----DVVSELGKVETVTIRRLHIPQ 295
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 8e-08
Identities = 17/163 (10%), Positives = 48/163 (29%), Gaps = 3/163 (1%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ I SL+ + + L + + L LH + ++ +L ++ L+L L
Sbjct: 152 ELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARF 211
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
+ + + + L+ L L+ + ++ + +G
Sbjct: 212 QFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVE--FDDCTLNGLGDF 269
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ L + ++ + + L
Sbjct: 270 NPSESDVVSELGKV-ETVTIRRLHIPQFYLFYDLSTVYSLLEK 311
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 1e-12
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 13/137 (9%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L LT + EL L GN L + + L+ +K LDL + Q+T P + L+ L +
Sbjct: 79 APLKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVL 134
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-- 205
L N +T + L L +L+ L + ++ P + S + + A ++
Sbjct: 135 YLDLNQIT-NISP-LAGLTNLQYLSIGNAQVSDLTPLANLS----KLTTLKADDNKISDI 188
Query: 206 -GLCHLSQLKVADFSYN 221
L L L N
Sbjct: 189 SPLASLPNLIEVHLKNN 205
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 3e-11
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 15/153 (9%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+KI S++ L + L G + I + + L L L+L NQ+T
Sbjct: 21 AIKIAAGKSNVTDT--VTQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQIT 76
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+ P + NLT + ++ L N L + + L S++ L L ++ P S
Sbjct: 77 D-LAP-LKNLTKITELELSGNPLKN--VSAIAGLQSIKTLDLTSTQITDVTPLAGLS--- 129
Query: 192 ANIHGMYASS---ANLTGLCHLSQLKVADFSYN 221
N+ +Y N++ L L+ L+
Sbjct: 130 -NLQVLYLDLNQITNISPLAGLTNLQYLSIGNA 161
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 6e-10
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 29/129 (22%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L ++ +N+ + L + L +T I + L L+ + L+ N
Sbjct: 18 LANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IEG-VQYLNNLIGLELKDN 73
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
+T L L NL + EL L N L+ N++ + L
Sbjct: 74 QIT-DLA-PLKNLTKITELELSGNPLK-----------------------NVSAIAGLQS 108
Query: 213 LKVADFSYN 221
+K D +
Sbjct: 109 IKTLDLTST 117
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 4/89 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L L E+ L N + + P L L I+ L +T NL +
Sbjct: 189 SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVV 246
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRN 176
S PA + + + +L N
Sbjct: 247 KGPSGAPI--APATISDNGTYASPNLTWN 273
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 69.0 bits (168), Expect = 2e-12
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 17/162 (10%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
L L L L L N + + L LK+LK L L N ++ I + +L L + L
Sbjct: 83 LTNLKNLGWLFLDENKIKDLSS--LKDLKKLKSLSLEHNGISD-ING-LVHLPQLESLYL 138
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTG 206
+N +T L L L+ L L+ N++ VP + + +Y S ++L
Sbjct: 139 GNNKITDITV--LSRLTKLDTLSLEDNQISDIVPLAGLT----KLQNLYLSKNHISDLRA 192
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKD 248
L L L V + + L N ++N D
Sbjct: 193 LAGLKNLDVLELFSQECLNKPINHQSNLVVP----NTVKNTD 230
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 66.3 bits (161), Expect = 9e-12
Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 31/150 (20%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K N+ S+ L + ++I + +++ + + + L + L L N+LT
Sbjct: 23 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLT 78
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
I P + NL L + L N + L + L +L L+ L L+ N +
Sbjct: 79 D-IKP-LTNLKNLGWLFLDENKIK-DLSS-LKDLKKLKSLSLEHNGIS------------ 122
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYN 221
++ GL HL QL+ N
Sbjct: 123 -----------DINGLVHLPQLESLYLGNN 141
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 60.1 bits (145), Expect = 8e-10
Identities = 17/126 (13%), Positives = 37/126 (29%), Gaps = 29/126 (23%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
+ E I + I P +L +T + L + +I ++ +
Sbjct: 1 MGETITVSTPIKQIFP--DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK 56
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKV 215
+ + L ++ +L L+ N+L ++ L +L L
Sbjct: 57 -SVQG-IQYLPNVTKLFLNGNKLT-----------------------DIKPLTNLKNLGW 91
Query: 216 ADFSYN 221
N
Sbjct: 92 LFLDEN 97
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 9e-04
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L LT LQ L L N++ + + L LK L +L+L + + NL +
Sbjct: 169 VPLAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV 226
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRN 176
+ P + + E+ ++ +
Sbjct: 227 KNTDG--SLVTPEIISDDGDYEKPNVKWH 253
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 2e-12
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L L L N L L RL L+L +LT G L L ++L
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT--KLQVDGTLPVLGTLDLS 85
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
N L LP L +L L + NRL ++P G
Sbjct: 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLG 118
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 4e-11
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L + N L + L L L+ L L N+L +PP + L K++L +
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLAN 157
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N LT LPA L L +L+ L L N L +P G
Sbjct: 158 NNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 3e-10
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
T L +L L L + + G L L LDL NQL +P L L +++ N
Sbjct: 54 YTRLTQLNLDRAELTKL--QVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFN 110
Query: 153 GLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LT LP L L+EL+L N L+ +P G
Sbjct: 111 RLT-SLPLGALRGLGELQELYLKGNELK-TLPPG 142
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 3e-10
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVK 146
G L L L L N L +P L L +LD+ N+LT +P L L +
Sbjct: 71 QVDGTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQE 128
Query: 147 INLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+ L+ N L LP L LE+L L N L +PAG
Sbjct: 129 LYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLT-ELPAG 166
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L LQEL L GN L + P L +L+ L L N LT +P + L L + LQ
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE-LPAGLLNGLENLDTLLLQE 181
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L +P L L N
Sbjct: 182 NSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 2e-12
Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 15/170 (8%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
N + S + ++ L N L + + G L L+ L L NQL +
Sbjct: 306 NFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKE-LS 364
Query: 136 PEIG---NLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+ L ++++ N ++ SL L++ N L +
Sbjct: 365 KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF----RCLP 420
Query: 192 ANIHGMYASSANLT----GLCHLSQLKVADFSYNFFVGSIPKC-LEYLPS 236
I + S + + L L+ + + N S+P + L S
Sbjct: 421 PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQL-KSVPDGIFDRLTS 469
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 1e-10
Identities = 33/161 (20%), Positives = 56/161 (34%), Gaps = 28/161 (17%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L+ L+ LI+ N + + + L+ LDL N+L I L ++L N
Sbjct: 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-IS--CHPTVNLKHLDLSFN 100
Query: 153 GLTGRLP--AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
LP E GN+ L+ L L L+ +++ + HL
Sbjct: 101 AFD-ALPICKEFGNMSQLKFLGLSTTHLE---------------------KSSVLPIAHL 138
Query: 211 SQLKVADFSYNFFVGSI-PKCLEYLPSTSFQGNCLQNKDPK 250
+ KV + P+ L+ + S NK+
Sbjct: 139 NISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFH 179
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 2e-08
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L + N L I + L R+K+LDL +N++ IP ++ L L ++N+ SN
Sbjct: 398 TKSLLSLNMSSNILTDTIFR--CLPPRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASN 454
Query: 153 GLTGRLPAE-LGNLISLEELHLDRNRLQ 179
L +P L SL+++ L N
Sbjct: 455 QLK-SVPDGIFDRLTSLQKIWLHTNPWD 481
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 5e-07
Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 12/148 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L + + + + I + + ++ + ++ +N
Sbjct: 275 LKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGM---YASSANLT---- 205
LT + G+L LE L L N+L+ + + T + + S +++
Sbjct: 335 LLTDTVFENCGHLTELETLILQMNQLK-ELS--KIAEMTTQMKSLQQLDISQNSVSYDEK 391
Query: 206 -GLC-HLSQLKVADFSYNFFVGSIPKCL 231
G C L + S N +I +CL
Sbjct: 392 KGDCSWTKSLLSLNMSSNILTDTIFRCL 419
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 31/158 (19%), Positives = 52/158 (32%), Gaps = 41/158 (25%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA 160
N LI + PK L ++ IL++ N ++ +I +L+ L + + N + L
Sbjct: 7 RSKNGLIHV-PK--DLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDI 62
Query: 161 E-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFS 219
LE L L N+L + LK D S
Sbjct: 63 SVFKFNQELEYLDLSHNKLV-KISCH-----------------------PTVNLKHLDLS 98
Query: 220 YNFFVGSIPKC--------LEYLPSTSFQGNCLQNKDP 249
+N F ++P C L++L L+
Sbjct: 99 FNAF-DALPICKEFGNMSQLKFL---GLSTTHLEKSSV 132
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 9e-04
Identities = 19/134 (14%), Positives = 33/134 (24%), Gaps = 9/134 (6%)
Query: 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGL 154
+ + L G LK L I + ++ P + + N +G
Sbjct: 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGT 312
Query: 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL------- 207
+ L N L + T + + L L
Sbjct: 313 RMVHMLCPSKISPFLHLDFSNNLLT-DTVFENCGHLT-ELETLILQMNQLKELSKIAEMT 370
Query: 208 CHLSQLKVADFSYN 221
+ L+ D S N
Sbjct: 371 TQMKSLQQLDISQN 384
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 3e-12
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L L EL L N + I ++L +L L LG NQ+ I L L +++L
Sbjct: 190 DLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM-IENGSLSFLPTLRELHL 248
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+N L+ R+PA L +L L+ ++L N + V
Sbjct: 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVND 283
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 5e-12
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 12/152 (7%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEIGNLTGLVKINL 149
L + L EL +H N + + L+ + +++G N L P + L + +
Sbjct: 120 NLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRI 179
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-- 207
LT +P +L +L ELHLD N++Q A+ Y+ ++ + + +
Sbjct: 180 SEAKLT-GIPKDL--PETLNELHLDHNKIQ-AIELEDLLRYS-KLYRLGLGHNQIRMIEN 234
Query: 208 ---CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L+ N +P L L
Sbjct: 235 GSLSFLPTLRELHLDNNKLS-RVPAGLPDLKL 265
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 1e-11
Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L +L L+L N + I K L++L+ L + N L IPP + + LV++ + N
Sbjct: 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE-IPPNL--PSSLVELRIHDN 133
Query: 153 GLTGRLPAE-LGNLISLEELHLDRNRLQ-GAVPAGSNSGYTANIHGMYASSANLTGLCH- 209
+ ++P L ++ + + N L+ G+ G ++ + S A LTG+
Sbjct: 134 RIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG--LKLNYLRISEAKLTGIPKD 190
Query: 210 -LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L +N ++ +
Sbjct: 191 LPETLNELHLDHN--------KIQAIELEDLLR 215
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 20/138 (14%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
+ L L N++ + + L+ L L L N+++ I + L L K+ +
Sbjct: 51 EISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK-IHEKAFSPLRKLQKLYI 109
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
N L +P L SL EL + NR++ VP G SG N+ +
Sbjct: 110 SKNHLV-EIPPNL--PSSLVELRIHDNRIR-KVPKGVFSGLR-----------NMNCI-E 153
Query: 210 LS--QLKVADFSYNFFVG 225
+ L+ + F F G
Sbjct: 154 MGGNPLENSGFEPGAFDG 171
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 9/94 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L L L N + I L L L+ L L N+L+ +P + +L L + L +N
Sbjct: 216 YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYLHTN 274
Query: 153 GLTGRLPAE-------LGNLISLEELHLDRNRLQ 179
+T ++ + L N +
Sbjct: 275 NIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 11/94 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-------GNLTGLV 145
L L+EL L N L +P L LK L+++ L TN +T +
Sbjct: 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK-VGVNDFCPVGFGVKRAYYN 297
Query: 146 KINLQSNGLTGRL--PAELGNLISLEELHLDRNR 177
I+L +N + PA + + +
Sbjct: 298 GISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 5e-12
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 18/155 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L +L+ L L N++ I L L L+L N LT IP L+ L ++ L++
Sbjct: 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTV-IPSGAFEYLSKLRELWLRN 156
Query: 152 NGLTGRLPAE-LGNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTGLC- 208
N + +P+ + SL L L +L+ + G+ G N+ + N+ +
Sbjct: 157 NPIE-SIPSYAFNRVPSLMRLDLGELKKLE-YISEGAFEGLF-NLKYLNLGMCNIKDMPN 213
Query: 209 --HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L+ + S N + SF G
Sbjct: 214 LTPLVGLEELEMSGNH--------FPEIRPGSFHG 240
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 4e-11
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ + + L L NN+ I L L++L LG N + I L L + L
Sbjct: 72 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ-IEVGAFNGLASLNTLEL 130
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
N LT +P+ L L EL L N ++ ++P+ +
Sbjct: 131 FDNWLT-VIPSGAFEYLSKLRELWLRNNPIE-SIPSYA 166
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQS 151
L L+ L L N+ + L L L+ L++ N I P L+ L K+ + +
Sbjct: 195 LFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPE-IRPGSFHGLSSLKKLWVMN 251
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
+ ++ L SL EL+L N L ++P
Sbjct: 252 SQVSLIERNAFDGLASLVELNLAHNNLS-SLPHD 284
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVK 146
P L L L+EL + GN+ I P L LK L + +Q++ I L LV+
Sbjct: 212 PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL-IERNAFDGLASLVE 270
Query: 147 INLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
+NL N L+ LP + L L ELHL N
Sbjct: 271 LNLAHNNLS-SLPHDLFTPLRYLVELHLHHNPWN 303
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 21/123 (17%), Positives = 39/123 (31%), Gaps = 32/123 (26%)
Query: 119 RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
+ + L+ +P I + +NL N + +L LE L L RN +
Sbjct: 55 QFSKVVCTRRGLSE-VPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI 111
Query: 179 QGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
+ + G+ L+ L + N+ L +PS +
Sbjct: 112 R-QIEVGA--------------------FNGLASLNTLELFDNW--------LTVIPSGA 142
Query: 239 FQG 241
F+
Sbjct: 143 FEY 145
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 6e-12
Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 22/156 (14%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L+L N+L I + + L+ LDL +N L + + +L L + L +
Sbjct: 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHT-LDEFLFSDLQALEVLLLYN 121
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
N + + ++ L++L+L +N++ P + L
Sbjct: 122 NHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVEL-----------------IKDGNKL 162
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+L + D S N L+ LP+ G L N
Sbjct: 163 PKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 4e-08
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI----GNLTGLVKIN 148
L L+ L+L+ N+++ + + +L+ L L NQ++ P E+ L L+ ++
Sbjct: 111 LQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLD 169
Query: 149 LQSNGLTGRLPAELGNLISL--EELHLDRNRLQ 179
L SN L +L L + L+L N L+
Sbjct: 170 LSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 22/140 (15%)
Query: 110 IPKELGLLKRLKILDLGTNQLTGPIPPEI--GNLTGLVKINLQSNGLTGRLPAE-LGNLI 166
+P+ L +LDL N L+ + E LT L + L N L + +E +
Sbjct: 33 VPQ--SLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVP 88
Query: 167 SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYN 221
+L L L N L + S + + + ++ + ++QL+ S N
Sbjct: 89 NLRYLDLSSNHLH-TLDEFLFSDLQ-ALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQN 146
Query: 222 FFVGSIPKCLEYLPSTSFQG 241
+ P +
Sbjct: 147 Q--------ISRFPVELIKD 158
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 7e-12
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L +L+ L L N++ I L L L+L N+LT IP L+ L ++ L++
Sbjct: 87 LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT-IPNGAFVYLSKLKELWLRN 145
Query: 152 NGLTGRLPAEL-GNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTGLC- 208
N + +P+ + SL L L RL + G+ G + N+ + + NL +
Sbjct: 146 NPIE-SIPSYAFNRIPSLRRLDLGELKRLS-YISEGAFEGLS-NLRYLNLAMCNLREIPN 202
Query: 209 --HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L +L D S N L + SFQG
Sbjct: 203 LTPLIKLDELDLSGN--------HLSAIRPGSFQG 229
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ T + L LH N + I L+ L+IL L N + I L L + L
Sbjct: 61 GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-IEIGAFNGLANLNTLEL 119
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
N LT +P L L+EL L N ++ ++P+ +
Sbjct: 120 FDNRLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYA 155
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 3e-10
Identities = 35/94 (37%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVK 146
P L L L EL L GN+L I P L L+ L + +Q+ I NL LV+
Sbjct: 201 PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV-IERNAFDNLQSLVE 259
Query: 147 INLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
INL N LT LP + L LE +HL N
Sbjct: 260 INLAHNNLT-LLPHDLFTPLHHLERIHLHHNPWN 292
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGL 154
++I NL + P G+ ++L+L NQ+ I +L L + L N +
Sbjct: 45 FSKVICVRKNLREV-PD--GISTNTRLLNLHENQIQI-IKVNSFKHLRHLEILQLSRNHI 100
Query: 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
L +L L L NRL +P G+
Sbjct: 101 RTIEIGAFNGLANLNTLELFDNRLT-TIPNGA 131
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-11
Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 19/151 (12%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ SS+ + LT L +LI NN+ + +L L L +N+LT
Sbjct: 46 SLDCHNSSITDM--TGIEKLTGLTKLICTSNNITTL---DLSQNTNLTYLACDSNKLTN- 99
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
+ + LT L +N +N LT ++ L L+ RN L + N+
Sbjct: 100 LD--VTPLTKLTYLNCDTNKLT---KLDVSQNPLLTYLNCARNTLT-EIDVSHNT----Q 149
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYN 221
+ + + +QL D S+N
Sbjct: 150 LTELDCHLNKKITKLDVTPQTQLTTLDCSFN 180
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 2e-11
Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 16/136 (11%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
++ T L L N + + ++ K L L+ TN +T ++ L +
Sbjct: 164 LDVTPQTQLTTLDCSFNKITEL---DVSQNKLLNRLNCDTNNITK---LDLNQNIQLTFL 217
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+ SN LT ++ L L N L + + S + ++ +L +
Sbjct: 218 DCSSNKLTE---IDVTPLTQLTYFDCSVNPLT-ELDVSTLS----KLTTLHCIQTDLLEI 269
Query: 208 --CHLSQLKVADFSYN 221
H +QL
Sbjct: 270 DLTHNTQLIYFQAEGC 285
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 5e-11
Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 15/135 (11%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
++ T L EL H N I + + +L LD N++T + + L ++N
Sbjct: 143 DVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLN 197
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
+N +T +L L I L L N+L + + + S LT L
Sbjct: 198 CDTNNIT-KLD--LNQNIQLTFLDCSSNKLT-EIDVTPLT----QLTYFDCSVNPLTELD 249
Query: 208 -CHLSQLKVADFSYN 221
LS+L
Sbjct: 250 VSTLSKLTTLHCIQT 264
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 15/131 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L L H +++ + + L L L +N +T ++ T L + SN
Sbjct: 41 LATLTSLDCHNSSITDM--TGIEKLTGLTKLICTSNNITT---LDLSQNTNLTYLACDSN 95
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--CHL 210
LT L + L L L+ D N+L + N + + + LT + H
Sbjct: 96 KLT-NLD--VTPLTKLTYLNCDTNKLT-KLDVSQNP----LLTYLNCARNTLTEIDVSHN 147
Query: 211 SQLKVADFSYN 221
+QL D N
Sbjct: 148 TQLTELDCHLN 158
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 9e-09
Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 12/128 (9%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
+ + L L LD + +T I LTGL K+ SN +T
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD--MTGIEKLTGLTKLICTSNNIT 77
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--CHLSQL 213
L L +L L D N+L + + + + + LT L L
Sbjct: 78 T-LD--LSQNTNLTYLACDSNKLT-NLDVTPLT----KLTYLNCDTNKLTKLDVSQNPLL 129
Query: 214 KVADFSYN 221
+ + N
Sbjct: 130 TYLNCARN 137
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
+L T L G I + ++ +L +LD +T + + LV +
Sbjct: 270 DLTHNTQLIYFQAEGCRKIKEL--DVTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLY 324
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
L + LT L + + L+ L +Q
Sbjct: 325 LNNTELT-ELD--VSHNTKLKSLSCVNAHIQ 352
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 9e-08
Identities = 28/198 (14%), Positives = 58/198 (29%), Gaps = 44/198 (22%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG- 132
++ S + L ++ LT L N L + ++ L +L L L
Sbjct: 216 FLDCSSNKLTEI---DVTPLTQLTYFDCSVNPLTEL---DVSTLSKLTTLHCIQTDLLEI 269
Query: 133 PI------------------PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174
+ ++ + T L ++ Q+ G+T L L L L+L+
Sbjct: 270 DLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLYLN 326
Query: 175 RNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSIPKCL 231
L + N+ + + +A++ + L +
Sbjct: 327 NTELT-ELDVSHNT----KLKSLSCVNAHIQDFSSVGKIPALNNNFEAEGQ--------T 373
Query: 232 EYLPSTSFQGNCLQNKDP 249
+P + N L
Sbjct: 374 ITMPKETLTNNSLTIAVS 391
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 1e-11
Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 14/135 (10%)
Query: 55 ADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKEL 114
ADP CS L PEL ++ + L N++ +
Sbjct: 1 ADPGTSE---CSVIGYNA---ICINRGLHQV--PEL--PAHVNYVDLSLNSIAELNETSF 50
Query: 115 GLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELH 172
L+ L+ L + I L+ L+ + L N +L L +LE L
Sbjct: 51 SRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL-QLETGAFNGLANLEVLT 109
Query: 173 LDRNRLQGA-VPAGS 186
L + L GA +
Sbjct: 110 LTQCNLDGAVLSGNF 124
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 6e-10
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
T L++L L N + I L L L+L N L I + NL L ++L
Sbjct: 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGS-IDSRMFENLDKLEVLDLSY 356
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N + L + L +L+EL LD N+L+ +VP G
Sbjct: 357 NHIR-ALGDQSFLGLPNLKELALDTNQLK-SVPDG 389
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 94 TYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSN 152
+ ++ L + + ++ L+ L L N++ I LT L+K+NL N
Sbjct: 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQN 333
Query: 153 GLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
L + + + NL LE L L N ++ A+ S
Sbjct: 334 FLG-SIDSRMFENLDKLEVLDLSYNHIR-ALGDQS 366
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT+L +L L N L I + L +L++LDL N + + + L L ++ L +
Sbjct: 322 LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA-LGDQSFLGLPNLKELALDT 380
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
N L +P L SL+++ L N
Sbjct: 381 NQLK-SVPDGIFDRLTSLQKIWLHTNPWD 408
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 21/169 (12%), Positives = 49/169 (28%), Gaps = 30/169 (17%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI----- 147
L+ + ++ L + LDL N + + KI
Sbjct: 187 LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLIL 246
Query: 148 NLQSNGLTGRLPAELGNL----------ISLEELHLDRNRLQGAVPAGSNSGYTANIHGM 197
+ N + + ++ L ++++ A+ S +T ++ +
Sbjct: 247 SNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFT-DLEQL 304
Query: 198 YASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ + + L+ L + S NF L + S F+
Sbjct: 305 TLAQNEINKIDDNAFWGLTHLLKLNLSQNF--------LGSIDSRMFEN 345
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 65.2 bits (158), Expect = 2e-11
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L + L L N L + P L L+ L++L N L + NL L ++
Sbjct: 457 CHLEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDNALE--NVDGVANLPRLQEL 513
Query: 148 NLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQ 179
L +N L A L + L L+L N L
Sbjct: 514 LLCNNRLQQ-SAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 1e-07
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG- 132
+++S + L+ L P L L L+ L N L + + L RL+ L L N+L
Sbjct: 467 HLDLSHNRLRA-LPPALAALRCLEVLQASDNALENV--DGVANLPRLQELLLCNNRLQQS 523
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168
+ + LV +NLQ N L + L +
Sbjct: 524 AAIQPLVSCPRLVLLNLQGNSLC-QEEGIQERLAEM 558
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 5e-11
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
+ L + +L L+GN L I P L LK L L L N++ + + +L L ++L
Sbjct: 64 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSL 119
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTG 206
+ NG++ + L +L LE L+L N++ + + + +++
Sbjct: 120 EHNGIS-DING-LVHLPQLESLYLGNNKITDITVLSRLT----KLDTLSLEDNQISDIVP 173
Query: 207 LCHLSQLKVADFSYN 221
L L++L+ S N
Sbjct: 174 LAGLTKLQNLYLSKN 188
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 8e-10
Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 31/150 (20%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K N+ S+ L + ++I + +++ + + + L + L L N+LT
Sbjct: 26 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLT 81
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
I P + NL L + L N + L + L +L L+ L L+ N +
Sbjct: 82 D-IKP-LANLKNLGWLFLDENKVK-DLSS-LKDLKKLKSLSLEHNGIS------------ 125
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYN 221
++ GL HL QL+ N
Sbjct: 126 -----------DINGLVHLPQLESLYLGNN 144
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 9e-09
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 29/129 (22%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L ++ + L + + + + + I L + K+ L N
Sbjct: 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQG-IQYLPNVTKLFLNGN 78
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
LT P L NL +L L LD N+++ +L+ L L +
Sbjct: 79 KLTDIKP--LANLKNLGWLFLDENKVK-----------------------DLSSLKDLKK 113
Query: 213 LKVADFSYN 221
LK +N
Sbjct: 114 LKSLSLEHN 122
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 8e-11
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+++ N + I + + L +N+L + ++ L L + L+S
Sbjct: 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN-VQHKMFKGLESLKTLMLRS 114
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N +T + + L S+ L L N++ V G
Sbjct: 115 NRIT-CVGNDSFIGLSSVRLLSLYDNQIT-TVAPG 147
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-08
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Query: 91 GLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148
+ Y EL L+ N + L +L+ ++ N++T I +G+ +I
Sbjct: 29 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD-IEEGAFEGASGVNEIL 87
Query: 149 LQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
L SN L + ++ L SL+ L L NR+ V S
Sbjct: 88 LTSNRLE-NVQHKMFKGLESLKTLMLRSNRIT-CVGNDS 124
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L+ + L N + + P L+ L L L N++T +P + L L + L +
Sbjct: 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE-LPKSLFEGLFSLQLLLLNA 113
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N + L + +L +L L L N+LQ + G
Sbjct: 114 NKIN-CLRVDAFQDLHNLNLLSLYDNKLQ-TIAKG 146
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L + E+ L N + I P K+L+ +DL NQ++ + P+ L L + L
Sbjct: 29 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE-LAPDAFQGLRSLNSLVL 87
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N +T LP L L SL+ L L+ N++ +
Sbjct: 88 YGNKIT-ELPKSLFEGLFSLQLLLLNANKIN-CLRVD 122
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L+L+GN + + L L++L L N++ + + +L L ++L
Sbjct: 79 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINC-LRVDAFQDLHNLNLLSLYD 137
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L L +++ +HL +N
Sbjct: 138 NKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 60.9 bits (147), Expect = 3e-10
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQ 150
L EL + + + L L L+ L + + L + P+ L ++NL
Sbjct: 30 AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLSRLNLS 88
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N L L + +SL+EL L N L
Sbjct: 89 FNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 8e-06
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Query: 110 IPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQSNGLTGRLPAE-LGNLIS 167
L + L L + Q + + L L + + +GL + +
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPR 81
Query: 168 LEELHLDRNRLQ 179
L L+L N L+
Sbjct: 82 LSRLNLSFNALE 93
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 4e-10
Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L EL L I L+ +++ N + I ++ NL L +I +
Sbjct: 27 DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86
Query: 150 Q-SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
+ +N L P NL +L+ L + ++ +P
Sbjct: 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHK--------------------I 125
Query: 209 HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
H Q + D N + + SF G
Sbjct: 126 HSLQKVLLDIQDNIN-------IHTIERNSFVG 151
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 9e-08
Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 21/159 (13%)
Query: 93 LTYLQELILHGNNLIGIIP----KELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKI 147
L+++ + N+++ +I L L ++I N L I PE NL L +
Sbjct: 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK--ANNLLY-INPEAFQNLPNLQYL 109
Query: 148 NLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT- 205
+ + G+ LP + + L + N + S G + ++ + +
Sbjct: 110 LISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168
Query: 206 ---GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ +QL + S N LE LP+ F G
Sbjct: 169 IHNSAFNGTQLDELNLSDN-------NNLEELPNDVFHG 200
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 2e-07
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL L L+ N + I + ++ N L +P ++ +G V +++
Sbjct: 151 GLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEE-LPNDVFHGASGPVILDI 209
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNR 177
+ LP+ L NL L +
Sbjct: 210 SRTRIH-SLPSYGLENLKKLRARSTYNLK 237
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 5e-10
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L+ LQ+L+ NL + +G LK LK L++ N + PE NLT L ++L S
Sbjct: 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158
Query: 152 NGLTGRLPAE----LGNLISLE-ELHLDRNRLQGAVPAGS 186
N + + L + L L L N + + G+
Sbjct: 159 NKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGA 196
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L + L L N L + L++LDL ++ I +L+ L + L
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLIL 83
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQ 179
N + L L SL++L L
Sbjct: 84 TGNPIQ-SLALGAFSGLSSLQKLVAVETNLA 113
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI----GNLTGL-VK 146
L L+EL + N + E L L+ LDL +N++ I + L +
Sbjct: 123 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS-IYCTDLRVLHQMPLLNLS 181
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
++L N + + I L+EL LD N+L+ +VP G
Sbjct: 182 LDLSLNPMN-FIQPGAFKEIRLKELALDTNQLK-SVPDG 218
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 5e-07
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKI----LDLGTNQLTGPIPPEIGNLTGLVKIN 148
LT L+ L L N + I +L +L ++ + LDL N + I P L ++
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLKELA 206
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRN 176
L +N L L SL+++ L N
Sbjct: 207 LDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 5e-10
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
+ ++L L N L + K L +L++L L N+L +P I L L + +
Sbjct: 34 NIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWV 92
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L++L EL LDRN+L+ ++P
Sbjct: 93 TDNKLQ-ALPIGVFDQLVNLAELRLDRNQLK-SLPPR 127
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 1e-09
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+ L + N L + L L L L NQL +PP + +LT L ++L
Sbjct: 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS-LPPRVFDSLTKLTYLSLGY 142
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L SL+EL L N+L+ VP G
Sbjct: 143 NELQ-SLPKGVFDKLTSLKELRLYNNQLK-RVPEG 175
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 7e-09
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L EL L N L + P+ L +L L LG N+L +P + LT L ++ L +
Sbjct: 108 LVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYN 166
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L R+P L L+ L LD N+L+ VP G
Sbjct: 167 NQLK-RVPEGAFDKLTELKTLKLDNNQLK-RVPEG 199
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L L N L + L LK L L NQL +P LT L + L +
Sbjct: 132 LTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDN 190
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L +L L+ L L N
Sbjct: 191 NQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 9e-10
Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 39/176 (22%)
Query: 89 ELGLLTYLQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ + T +++ LHG I + L LK K L L TN + +I +L+G+ +
Sbjct: 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-----KISSLSGMENL 72
Query: 148 ---NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204
+L N + ++ +LEEL + N++ +L
Sbjct: 73 RILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-----------------------SL 108
Query: 205 TGLCHLSQLKVADFSYNFFVGSIP-----KCLEYLPSTSFQGNCLQNKDPKQRATT 255
+G+ L L+V S N + + L+ L GN L N + AT+
Sbjct: 109 SGIEKLVNLRVLYMSNN-KITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATS 163
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
L + L ++ ++ L ++ + + + + + T L +++L
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQS-LAG-MQFFTNLKELHL 70
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTG 206
N ++ L L +L LEEL ++RNRL+ + ++ + ++ + +
Sbjct: 71 SHNQIS-DLSP-LKDLTKLEELSVNRNRLK-NLNGIPSA----CLSRLFLDNNELRDTDS 123
Query: 207 LCHLSQLKVADFSYN 221
L HL L++ N
Sbjct: 124 LIHLKNLEILSIRNN 138
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 6e-09
Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 30/132 (22%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
L LT L+EL ++ N L + + L L L N+L + +L L +++
Sbjct: 81 LKDLTKLEELSVNRNRLKNLNG--IPSAC-LSRLFLDNNELRDTDS--LIHLKNLEILSI 135
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
++N L + LG L LE L L N + N GL
Sbjct: 136 RNNKLK-SIVM-LGFLSKLEVLDLHGNEIT-----------------------NTGGLTR 170
Query: 210 LSQLKVADFSYN 221
L ++ D +
Sbjct: 171 LKKVNWIDLTGQ 182
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 2e-08
Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 29/124 (23%)
Query: 98 ELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGR 157
E I + + P L +LG +T + L+G+ N ++ +
Sbjct: 1 ESIQRPTPINQVFP--DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-S 55
Query: 158 LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVAD 217
L + +L+ELHL N++ +L+ L L++L+
Sbjct: 56 LAG-MQFFTNLKELHLSHNQIS-----------------------DLSPLKDLTKLEELS 91
Query: 218 FSYN 221
+ N
Sbjct: 92 VNRN 95
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
+ L L L N L L LK L+IL + N+L I +G L+ L ++L
Sbjct: 103 IPSAC-LSRLFLDNNELRDTDS--LIHLKNLEILSIRNNKLKS-IVM-LGFLSKLEVLDL 157
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRL 178
N +T L L + + L +
Sbjct: 158 HGNEITNTGG--LTRLKKVNWIDLTGQKC 184
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 7e-09
Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 13/161 (8%)
Query: 318 KSKPSIIIPWKKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKG 377
+ K + + E + + +EL+ IG V G
Sbjct: 158 TDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELK-----LLQTIGKGEFGDVMLG 212
Query: 378 TMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437
+G +AV + K F E + + ++ H N +LLG E +
Sbjct: 213 DYRGNK-VAVKCI--KN----DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL-YI 264
Query: 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
V +Y + G+L ++L R + +K + + ++YL
Sbjct: 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 1e-08
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLT 155
EL L GN ++PKEL K L ++DL N+++ + + N+T L+ + L N L
Sbjct: 34 TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLR 91
Query: 156 GRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+P L SL L L N + VP G
Sbjct: 92 -CIPPRTFDGLKSLRLLSLHGNDIS-VVPEG 120
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 374 VYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V+ G ++ +AV S +E L+ F +E L + +H N +L+G C + P
Sbjct: 130 VFSGRLRADNTLVAVKSC--RETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 186
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+V + G L E ++ +++V A G++YL
Sbjct: 187 I--YIVMELVQGGDFLTFLR-TEGARLRVKTLLQMVGDAAAGMEYLE 230
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Query: 374 VYKGTMKGGPEIAVISLCIKE--EHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V + + +K +++E+ L + HE+ K G C ++
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ LV +Y G+L ++L R + + + I G+ YLH
Sbjct: 107 AASLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLHA 152
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-08
Identities = 21/101 (20%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 91 GLLTYLQELILHGNNL----IGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLV 145
+ + L +L + + + +L+L +N LTG + + + L
Sbjct: 397 LMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVL- 455
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+L +N + +P ++ +L +L+EL++ N+L+ +VP G
Sbjct: 456 --DLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGV 492
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 2e-07
Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 26/113 (23%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI------------ 138
L + L L N++ + ++ L L++L L N++ + +
Sbjct: 49 DLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS-LDFHVFLFNQDLEYLDV 107
Query: 139 ----------GNLTGLVKINLQSNGLTGRLP--AELGNLISLEELHLDRNRLQ 179
+ L ++L N LP E GNL L L L + +
Sbjct: 108 SHNRLQNISCCPMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFR 159
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 8e-07
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 6/124 (4%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNL--IGIIPKELGLLKRLKI 122
C + +N + + + L LQ LIL N L + + L+
Sbjct: 348 CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLET 407
Query: 123 LDLGTNQLT-GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA 181
LD+ N L ++ +NL SN LTG + L ++ L L NR+ +
Sbjct: 408 LDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL--PPKVKVLDLHNNRIM-S 464
Query: 182 VPAG 185
+P
Sbjct: 465 IPKD 468
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 22/173 (12%), Positives = 41/173 (23%), Gaps = 19/173 (10%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ I+ + L L + + + + I L +
Sbjct: 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIH 345
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
+ + +N N T + L L+ L L RN L+ +
Sbjct: 346 MVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALM------ 398
Query: 195 HGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNK 247
++S L+ D S N + N N
Sbjct: 399 ------------TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNM 439
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 5e-04
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQ 150
L ++ L LH N + IPK++ L+ L+ L++ +NQL +P + LT L I L
Sbjct: 448 LPPKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLH 505
Query: 151 SN 152
N
Sbjct: 506 DN 507
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 21/158 (13%)
Query: 335 DHIYIDSEILKDV--VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPE----IAVI 388
D + I E+ + + V Q+ ++G V + +K +AV
Sbjct: 3 DSLGISDELKEKLEDVLIPEQQFT-----LGRMLGKGEFGSVREAQLKQEDGSFVKVAVK 57
Query: 389 SLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR----MLVFDYASN 444
L K + F RE A + +H + KL+G S R M++ + +
Sbjct: 58 ML--KADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKH 115
Query: 445 GTLYEHL----HYGERCQVSWTRRMKIVIGIARGLKYL 478
G L+ L + ++ ++ IA G++YL
Sbjct: 116 GDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL 153
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 336 HIYIDSEILKDVVRFSRQ---ELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISL 390
++D +D + + EL+ ++G+ V G +K EI+V
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 391 CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEH 450
+K + T F E + + + +H N +L G +S P M+V +Y NG+L
Sbjct: 80 TLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSF 136
Query: 451 LHYGERCQVSWTRRMKIVIGIARGLKYL 478
L + Q + + + ++ GIA G+KYL
Sbjct: 137 LRKHDA-QFTVIQLVGMLRGIASGMKYL 163
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 7/145 (4%)
Query: 336 HIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE- 394
H + +D F + L+ + + +G V + + +K+
Sbjct: 6 HHHAQLYACQDPTIFEERHLK-----YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL 60
Query: 395 EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG 454
+H + FQRE+ L ++ + K G + LV +Y +G L + L
Sbjct: 61 QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-R 119
Query: 455 ERCQVSWTRRMKIVIGIARGLKYLH 479
R ++ +R + I +G++YL
Sbjct: 120 HRARLDASRLLLYSSQICKGMEYLG 144
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 31/154 (20%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGPIPPEI-GNLTGLVKIN 148
L Q L L +L I L + + + + L + NL+ + I
Sbjct: 28 SLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQ-LESHSFYNLSKVTHIE 86
Query: 149 LQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+++ + + L L L+ L + L+ P +LT +
Sbjct: 87 IRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFP-------------------DLTKV 126
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ + + N + +P +FQG
Sbjct: 127 YSTDIFFILEITDN-------PYMTSIPVNAFQG 153
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 4e-08
Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 6/101 (5%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ L + N + IP GL L L N T + N T L +
Sbjct: 126 VYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGYAFNGTKLDAV 184
Query: 148 NLQSNGLTGRLPAE-LGNLIS-LEELHLDRNRLQGAVPAGS 186
L N + + G + S L + + + A+P+
Sbjct: 185 YLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKG 224
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 11/131 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKE--LGLLKRLKILDLGTNQLTGPIPPEI-GNLTG-LVKIN 148
L L+ L + N + + P + IL++ N IP L + +
Sbjct: 104 LPLLKFLGIF-NTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLK 162
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT--- 205
L +NG T + N L+ ++L++N+ + + G + + S ++T
Sbjct: 163 LYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221
Query: 206 --GLCHLSQLK 214
GL HL +L
Sbjct: 222 SKGLEHLKELI 232
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 7e-05
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
T L + L+ N + +I K+ G+ +LD+ +T +P + L L ++ +
Sbjct: 178 GTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSKG--LEHLKELIAR 234
Query: 151 SN 152
+
Sbjct: 235 NT 236
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 3e-08
Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 350 FSRQELEVACED--FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQR 407
F R + ++ IG V G +G ++AV + K F
Sbjct: 11 FYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCI--KN----DATAQAFLA 63
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKI 467
E + + ++ H N +LLG E +V +Y + G+L ++L R + +K
Sbjct: 64 EASVMTQLRHSNLVQLLGVIVEEKGGL-YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 122
Query: 468 VIGIARGLKYL 478
+ + ++YL
Sbjct: 123 SLDVCEAMEYL 133
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 3e-08
Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 10/155 (6%)
Query: 328 KKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPE--- 384
+ D ++ E+++ V F+ +IG VY GT+
Sbjct: 60 GANTVHIDLSALNPELVQAVQHVVI-GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKI 118
Query: 385 -IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443
AV SL F E + +H N LLG C S + ++V Y
Sbjct: 119 HCAVKSL--NRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMK 174
Query: 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+G L + E + + + +A+G+K+L
Sbjct: 175 HGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFL 208
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 3e-08
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VY+G K + V +KE+ F +E A + I H N +LLG C PF
Sbjct: 236 VYEGVWKK-YSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
++ ++ + G L ++L R +VS + + I+ ++YL
Sbjct: 292 --YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 374 VYKGTMKGGP-EIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESS 431
VY+G K +AV +L KE +E+ F +E A + I H N +LLG C
Sbjct: 29 VYEGVWKKYSLTVAVKTL--KE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
PF ++ ++ + G L ++L R +VS + + I+ ++YL
Sbjct: 83 PF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Query: 374 VYKGTMKGGPEIAVISLCIKE--EHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V + + +K G ++E+ L + HEN K G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
L+ ++ +G+L E+L + +++ +++K + I +G+ YL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLP-KNKNKINLKQQLKYAVQICKGMDYLG 143
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLT 155
++L L L + L +L L+L NQL + + +LT L + L +N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LSAGVFDDLTELGTLGLANNQLA 96
Query: 156 GRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LP + +L L++L+L N+L+ ++P+G
Sbjct: 97 -SLPLGVFDHLTQLDKLYLGGNQLK-SLPSG 125
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 6e-08
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L L N L + L L L L NQL +P + +LT L K+ L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGG 116
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP+ + L L+EL L+ N+LQ ++PAG
Sbjct: 117 NQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAG 149
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L L N L + L +L L LG NQL +P + LT L ++ L +
Sbjct: 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNT 140
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
N L +PA L +L+ L L N+LQ +VP G+
Sbjct: 141 NQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGA 174
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L +L L GN L + L +LK L L TNQL IP LT L ++L +
Sbjct: 106 LTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLST 164
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L L L+ + L N
Sbjct: 165 NQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 4e-08
Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 10/148 (6%)
Query: 335 DHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPE----IAVISL 390
D ++ E+++ V F+ +IG VY GT+ AV SL
Sbjct: 3 DLSALNPELVQAVQHVVI-GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL 61
Query: 391 CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEH 450
F E + +H N LLG C S + ++V Y +G L
Sbjct: 62 --NRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF 117
Query: 451 LHYGERCQVSWTRRMKIVIGIARGLKYL 478
+ E + + + +A+G+KYL
Sbjct: 118 IR-NETHNPTVKDLIGFGLQVAKGMKYL 144
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 10/126 (7%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADL 412
E+ +G+ V+ T ++AV ++ K G + + F E +
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM--KP----GSMSVEAFLAEANVM 237
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
+ H+ KL + P ++ ++ + G+L + L E + + + IA
Sbjct: 238 KTLQHDKLVKLHAVVTKE-PI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 294
Query: 473 RGLKYL 478
G+ ++
Sbjct: 295 EGMAFI 300
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VYKG E I + IK E + E +A +++ + +LLG C S+
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
L+ G L +++ + + + + IA+G+ YL
Sbjct: 91 V---QLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 133
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 5e-08
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VYKG +K + + IK + +T + F E + + +H N +L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P M++ +Y NG L + L + + S + + ++ GIA G+KYL
Sbjct: 120 PM--MIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYL 163
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 5e-08
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 374 VYKGTMKGGPEIAVISLC-IK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VY+G + G P +K E + EL F E +++ NH+N + +G +S
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 431 SPFTRMLVFDYASNGTLYEHL-----HYGERCQVSWTRRMKIVIGIARGLKYL 478
P ++ + + G L L + ++ + + IA G +YL
Sbjct: 106 LPR--FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 6e-08
Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
E+ +G V+ GT G +A IK F +E +
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEAFLQEAQVMK 234
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
++ HE +L E P +V +Y S G+L + L + + + + IA
Sbjct: 235 KLRHEKLVQLYAVVSEE-PI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 474 GLKYL 478
G+ Y+
Sbjct: 292 GMAYV 296
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 6e-08
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 91 GLLTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148
+ + EL+L+ N L I L G L L L+L NQLTG I P + + ++
Sbjct: 26 DIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQ 84
Query: 149 LQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
L N + + ++ L L+ L+L N++ V GS
Sbjct: 85 LGENKIK-EISNKMFLGLHQLKTLNLYDNQIS-CVMPGS 121
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L +L +L L N L GI P ++ L LG N++ I ++ L L +NL
Sbjct: 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE-ISNKMFLGLHQLKTLNLYD 111
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N ++ +P +L SL L+L N
Sbjct: 112 NQISCVMPGSFEHLNSLTSLNLASN 136
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 374 VYKGTMKGGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
V +G +K +AV ++ K ++ + F E A + +H N +LLG C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTM--KLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107
Query: 430 SSPFTR---MLVFDYASNGTLYEHL----HYGERCQVSWTRRMKIVIGIARGLKYL 478
S M++ + G L+ +L + +K ++ IA G++YL
Sbjct: 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL 163
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V KG + V +K E L+ E + ++++ +++G C E+
Sbjct: 33 VKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+ MLV + A G L ++L V +++V ++ G+KYL
Sbjct: 92 W--MLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYL 133
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 6e-08
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 374 VYKGTMKGGPEIAVISLC-IK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VY+G + G P +K E + EL F E +++ NH+N + +G +S
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 431 SPFTRMLVFDYASNGTLYEHL-----HYGERCQVSWTRRMKIVIGIARGLKYL 478
P ++ + + G L L + ++ + + IA G +YL
Sbjct: 147 LPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 7e-08
Identities = 37/95 (38%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN-LTGLVKINLQS 151
LT L LIL GN L + L LK L L NQL +P + + LT L +NL
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAH 142
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L +L EL L N+LQ ++P G
Sbjct: 143 NQLQ-SLPKGVFDKLTNLTELDLSYNQLQ-SLPEG 175
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L+EL+L N L + L L L+L NQL +P + LT L +++L
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSY 166
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L L++L L +N+L+ +VP G
Sbjct: 167 NQLQ-SLPEGVFDKLTQLKDLRLYQNQLK-SVPDG 199
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 87 APELGLLTYLQELILHGNNLIGI--IPKELGLLKRLKILDLGTNQLTGPIPPEIG---NL 141
A L + ++I + +++ + I L ++ L LG N+L +I L
Sbjct: 34 AVTQNELNSIDQIIANNSDIKSVQGIQY----LPNVRYLALGGNKLH-----DISALKEL 84
Query: 142 TGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
T L + L N L LP + L +L+EL L N+LQ ++P G
Sbjct: 85 TNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPDG 127
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 8e-08
Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESSP 432
V+ G ++A+ ++ +E G + F E + +++H +L G C E +P
Sbjct: 24 VHLGYWLNKDKVAIKTI--RE----GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 77
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
LV ++ +G L ++L +R + + + + + G+ YL
Sbjct: 78 I--CLVTEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYL 120
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 8e-08
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V+KG E I +CIK E+ + + ++H + +LLG C SS
Sbjct: 29 VHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS 88
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
LV Y G+L +H+ + + + IA+G+ YL
Sbjct: 89 L---QLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYL 131
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 9e-08
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESSP 432
V G KG ++AV + KE G + F +E + +++H K G C + P
Sbjct: 24 VKLGKWKGQYDVAVKMI--KE----GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP 77
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+V +Y SNG L +L + ++ +++ + G+ +L
Sbjct: 78 I--YIVTEYISNGCLLNYLR-SHGKGLEPSQLLEMCYDVCEGMAFL 120
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
E+ +G V+ GT G +A IK F +E +
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEAFLQEAQVMK 317
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
++ HE +L E P +V +Y S G+L + L + + + + IA
Sbjct: 318 KLRHEKLVQLYAVVSEE-PI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 474 GLKYL 478
G+ Y+
Sbjct: 375 GMAYV 379
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 374 VYKGTMKG--GPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRES 430
V +G G ++V C+K + + + F REV + ++H N +L G +
Sbjct: 34 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LT 92
Query: 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P +V + A G+L + L + + + +A G+ YL
Sbjct: 93 PPM--KMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYL 137
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 9/147 (6%)
Query: 337 IYIDSEILKDVVRFSRQ---ELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLC 391
Y + ++ R R E+E + IIGS V G ++ G ++ V
Sbjct: 25 FYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKA 84
Query: 392 IKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
+K + T F E + + + +H N +L G M+V +Y NG+L L
Sbjct: 85 LKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA--MIVTEYMENGSLDTFL 141
Query: 452 HYGERCQVSWTRRMKIVIGIARGLKYL 478
+ Q + + + ++ G+ G++YL
Sbjct: 142 RTHDG-QFTIMQLVGMLRGVGAGMRYL 167
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+EL L N L + L +L +LDLGTNQLT +P + L L ++ +
Sbjct: 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTV-LPSAVFDRLVHLKELFMCC 121
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
N LT LP + L L L LD+N+L+ ++P G
Sbjct: 122 NKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHG 153
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 83 KGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNL 141
K + G+ T Q L LH N + + P L LK L LG+NQL +P + +L
Sbjct: 29 KRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-LPVGVFDSL 87
Query: 142 TGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
T L ++L +N LT LP+ + L+ L+EL + N+L +P G
Sbjct: 88 TQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRG 130
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 1e-07
Identities = 26/126 (20%), Positives = 55/126 (43%), Gaps = 10/126 (7%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADL 412
E++ F +G+ +V G +G ++A+ + KE G + F E +
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI--KE----GSMSEDEFIEEAKVM 73
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
++HE +L G C + P ++ +Y +NG L +L R + + +++ +
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVC 130
Query: 473 RGLKYL 478
++YL
Sbjct: 131 EAMEYL 136
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VYKG E I + IK E + E +A +++ + +LLG C S+
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
L+ G L +++ + + + + IA+G+ YL
Sbjct: 91 V---QLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYL 133
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 374 VYKGTMKGGPE-----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
V + +AV L + + F+RE+ L + H+N K G C
Sbjct: 26 VEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCY 81
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ L+ +Y G+L ++L + ++ + ++ I +G++YL
Sbjct: 82 SAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG 131
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-07
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 81 SLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN 140
+G + G+ L L N+L + L L L LG N+L +P + N
Sbjct: 15 YSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFN 73
Query: 141 -LTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LT L +NL +N L LP + L L+EL L+ N+LQ ++P G
Sbjct: 74 KLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDG 118
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 8e-07
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L +L L GN L + L L L+L TNQL +P + LT L ++ L +
Sbjct: 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS-LPNGVFDKLTQLKELALNT 109
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L L++L L +N+L+ +VP G
Sbjct: 110 NQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVPDG 142
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 374 VYKGTMKGGPE-----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
V + +AV L + + F+RE+ L + H+N K G C
Sbjct: 57 VEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCY 112
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ L+ +Y G+L ++L + ++ + ++ I +G++YL
Sbjct: 113 SAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG 162
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 22/123 (17%)
Query: 374 VYKGTMKGGPEIAVISLC----IKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
V+ L +K+ T FQRE L + HE+ K G C +
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGD 88
Query: 430 SSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIGIARGL 475
P ++VF+Y +G L + L + ++ ++ + I IA G+
Sbjct: 89 GDPL--IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGM 146
Query: 476 KYL 478
YL
Sbjct: 147 VYL 149
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 374 VYKGTMKGGPEIAVISLC-IK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VY+G KG + + IK E + + F E + + N + +LLG +
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 431 SPFTRMLVFDYASNGTLYEHL--------HYGERCQVSWTRRMKIVIGIARGLKYL 478
P +++ + + G L +L + S ++ +++ IA G+ YL
Sbjct: 101 QPT--LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL 154
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 25/124 (20%)
Query: 374 VYKGTMKGGPE------IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
V+ +AV +L KE + FQRE L + H++ + G C
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKAL--KEA--SESARQDFQREAELLTMLQHQHIVRFFGVC 112
Query: 428 RESSPFTRMLVFDYASNGTLYEHL-------------HYGERCQVSWTRRMKIVIGIARG 474
E P ++VF+Y +G L L + + + + +A G
Sbjct: 113 TEGRPL--LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAG 170
Query: 475 LKYL 478
+ YL
Sbjct: 171 MVYL 174
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 9/109 (8%)
Query: 374 VYKGTMKGGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
VY G + A+ SL F RE + +NH N L+G
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSL--SRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLP 93
Query: 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
++ Y +G L + + + + + + +ARG++YL
Sbjct: 94 PEG-LPHVLLPYMCHGDLLQFIR-SPQRNPTVKDLISFGLQVARGMEYL 140
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 5e-07
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 7/107 (6%)
Query: 374 VYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V++G P +AV K + + F +E + + +H + KL+G +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVI-TEN 463
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P ++ + + G L L + + + ++ L YL
Sbjct: 464 PV--WIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYL 507
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 6e-07
Identities = 52/274 (18%), Positives = 89/274 (32%), Gaps = 62/274 (22%)
Query: 290 WLLTL---EIVTGTMVGVL-----FLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDS 341
W L E+V + VL FL++ + PS+ + ++D +Y D+
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIK--TEQRQ-PSM--MTRMYIEQRDRLYNDN 123
Query: 342 EIL-KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEE---- 395
++ K V SR + + + + + L+ G + G G + +C+ +
Sbjct: 124 QVFAKYNV--SRLQPYLKLRQALLELRPAKNVLID-G-VLGSGKTWVALDVCLSYKVQCK 179
Query: 396 -----HW---------TGYLE----LYFQREVADLARINHENTGKL--------LGYCRE 429
W LE L +Q + +R +H + KL L +
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239
Query: 430 SSPFTRML-VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELG---PP 485
S P+ L V N + + C++ T R K V H L
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLS--CKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 486 FTISE-LNSSAVYLTEDFS--P----KVSPLCLS 512
T E + YL P +P LS
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS 331
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 8e-07
Identities = 63/414 (15%), Positives = 125/414 (30%), Gaps = 134/414 (32%)
Query: 35 FKEAIYEDPHLVLSN------WNALDADPCHWTGIACSDARDRVLKI--NISGSSLKGFL 86
K YE+ LVL N WNA + ++C ++L +
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFN--------LSC-----KILLTTRFKQ-------V 277
Query: 87 APELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
L T + H + + + P E LL LK LD L P E+ +
Sbjct: 278 TDFLSAATTTHISLDH--HSMTLTPDEVKSLL--LKYLDCRPQDL----PREV------L 323
Query: 146 KINLQSNGLTGRLPAELGNLISLEE--LHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN 203
N + + + + ++ + H++ ++L + + N A M+
Sbjct: 324 TTNPRRLSIIA---ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF----- 375
Query: 204 LTGLCHLSQLKVADFSYNFFVGSIP-KCLEYL--------PS---TSFQGNCLQNKDPKQ 251
+L V F + IP L + L K PK+
Sbjct: 376 -------DRLSV--FPPS--A-HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 252 RATTLCGGAPPARTRAGLSPKHQAAEDVSKHQS--------ASRPAWLLTLEIVTG---- 299
++ L K + + + H+S + + L +
Sbjct: 424 STISIPSIY--------LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475
Query: 300 ---------------TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASE----------K 334
T+ ++FL F L++ K + W S S K
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRF--LEQ-KIRHDST-AWNASGSILNTLQQLKFYK 531
Query: 335 DHIY----IDSEILKDVVRFSRQ-ELEVACEDFSNIIG---SSPDSLVYKGTMK 380
+I ++ ++ F + E + C +++++ + D +++ K
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHK 585
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 8e-05
Identities = 52/374 (13%), Positives = 103/374 (27%), Gaps = 104/374 (27%)
Query: 16 VLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALD--ADPCHWTGIACSDARDRVL 73
+L T T+ A TT ++ + + L+ + D VL
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISL-DHHSMTLTPDEVKSLLLK---YLDCRPQDLPREVL 323
Query: 74 KIN---IS--GSSLKGFLAPELGLLTYLQELILHGNNLIGII--------PKEL-GLLKR 119
N +S S++ LA + + + L II P E + R
Sbjct: 324 TTNPRRLSIIAESIRDGLA----TWDNWKHVNC--DKLTTIIESSLNVLEPAEYRKMFDR 377
Query: 120 LKILDLGTNQLTGPIPPEI-----GN---------LTGLVK---INLQSNGLTGRLPA-- 160
L + + IP + + + L K + Q T +P+
Sbjct: 378 LSVFPPSAH-----IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432
Query: 161 --ELGNLISLEELH---LDRNRLQGAVPAGS-----NSGYTANIHGMYASSANLTGLCHL 210
L + LH +D + + Y + H + HL
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS-HIGH----------HL 481
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLS 270
++ + F +L F L+ K + + +
Sbjct: 482 KNIEHPE-RMTLF----RMV--FL-DFRF----LEQK--------IRHDSTAWNASGSIL 521
Query: 271 PKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKS 330
Q + + + P E + ++ FL L K ++ +
Sbjct: 522 NTLQQLKFYKPYICDNDP----KYERLVNAILD--FLPKIEENLICSKYT-DLL----RI 570
Query: 331 A--SEKDHIYIDSE 342
A +E + I+ ++
Sbjct: 571 ALMAEDEAIFEEAH 584
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 1e-04
Identities = 79/538 (14%), Positives = 144/538 (26%), Gaps = 201/538 (37%)
Query: 29 FWALTTFKEAIYE---------DPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISG 79
FW L + +E + + + ++S P T + RDR+ N +
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT-RMYIEQRDRLY--NDNQ 124
Query: 80 SSLKGFLA---PELGLLTYLQEL------ILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
K ++ P L L L EL ++ G ++G G K
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG--VLGS-----G-----K--------- 163
Query: 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-----LGNLISLEELHLDRNRLQGAVPAG 185
T + S + ++ + L N S E + +L +
Sbjct: 164 -----------TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI--- 209
Query: 186 SNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYL-----PST--S 238
+ +T+ N+ H Q ++ CL L +
Sbjct: 210 -DPNWTSRSDHSS----NIKLRIHSIQAELRRL---LKSKPYENCLLVLLNVQNAKAWNA 261
Query: 239 FQGNCLQNKDPKQRATTLCGGAPPARTRA---GLSPKHQAAEDVSKHQSASRPAWLLTLE 295
F +C K TT R + LS H S + LT +
Sbjct: 262 FNLSC------KILLTT--------RFKQVTDFLSAATT------THISLDHHSMTLTPD 301
Query: 296 IVTGTMVGVLFLVAGFTGL-------QRCKSKP---SIIIPWKKSASEKDHIYIDSEILK 345
V L+ + + + P SII + S +D +
Sbjct: 302 -------EVKSLLLKYLDCRPQDLPREVLTTNPRRLSII-----AESIRDGL-------- 341
Query: 346 DVVRFSRQE--LEVACEDFSNIIGSSPDSL-------VYKGTMKGGPEIAV------IS- 389
+ + V C+ + II SS + L ++ ++V I
Sbjct: 342 -----ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD-------RLSVFPPSAHIPT 389
Query: 390 --LCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
L + W + V + KL Y LV T+
Sbjct: 390 ILLSL---IW-FDVIKSDVMVVVN----------KLHKYS---------LVEKQPKESTI 426
Query: 448 YEH-LHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504
++ + ++ LH + + N + ++D P
Sbjct: 427 SIPSIYLELKVKL-------------ENEYALHRSI-----VDHYNIPKTFDSDDLIP 466
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 6e-07
Identities = 16/111 (14%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 374 VYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
++KG + E V+ + + H F + +++++H++ G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES--FFEAASMMSKLSHKHLVLNYGVC 81
Query: 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+LV ++ G+L +L + ++ ++++ +A + +L
Sbjct: 82 VCGDEN--ILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMHFL 129
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 7e-07
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 25/125 (20%)
Query: 374 VYKGTMKGGPE------IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
VYKG + G +A+ +L K++ G L F+ E AR+ H N LLG
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTL--KDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVV 81
Query: 428 RESSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIGIAR 473
+ P ++F Y S+G L+E L + + + +V IA
Sbjct: 82 TKDQPL--SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA 139
Query: 474 GLKYL 478
G++YL
Sbjct: 140 GMEYL 144
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 8e-07
Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESSP 432
V+ G G ++AV +K+ G + F E + ++ H+ +L + P
Sbjct: 29 VWMGYYNGHTKVAV--KSLKQ----GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
++ +Y NG+L + L +++ + + + IA G+ ++
Sbjct: 82 I--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 8e-07
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V +G + +I V +K+ RE + ++++ +L+G C ++
Sbjct: 26 VRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 83
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
MLV + A G L++ L G+R ++ + +++ ++ G+KYL
Sbjct: 84 L--MLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYL 126
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLT 155
L L N L + L +L L L NQ+ +P + LT L + L N L
Sbjct: 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHENKLQ 89
Query: 156 GRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LP + L L+EL LD N+L+ +VP G
Sbjct: 90 -SLPNGVFDKLTQLKELALDTNQLK-SVPDG 118
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 2e-06
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 7/107 (6%)
Query: 374 VYKGTMKG--GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VY+G G +I V K++ T + F E + ++H + KL+G E
Sbjct: 28 VYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP 86
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
++ + G L +L + + + + I + + YL
Sbjct: 87 T---WIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYL 129
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 7/107 (6%)
Query: 374 VYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V++G P +AV K + + F +E + + +H + KL+G +
Sbjct: 31 VHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVI-TEN 88
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P ++ + + G L L + + + ++ L YL
Sbjct: 89 PV--WIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYL 132
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 374 VYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V +G + +I V +K+ RE + ++++ +L+G C+ +
Sbjct: 352 VRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL 410
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
MLV + A G L++ L G+R ++ + +++ ++ G+KYL
Sbjct: 411 ---MLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYL 452
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 33/133 (24%)
Query: 374 VYKGTMKGGPE------IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
V++ G +AV L KEE + ++ FQRE A +A ++ N KLLG C
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKML--KEEA-SADMQADFQREAALMAEFDNPNIVKLLGVC 119
Query: 428 RESSPFTRMLVFDYASNGTLYEHL----------------------HYGERCQVSWTRRM 465
P L+F+Y + G L E L +S ++
Sbjct: 120 AVGKPM--CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQL 177
Query: 466 KIVIGIARGLKYL 478
I +A G+ YL
Sbjct: 178 CIARQVAAGMAYL 190
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-06
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 9/96 (9%)
Query: 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
A + +EL L G I +I L + +D N++ ++ L +
Sbjct: 12 AAQYTNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNEIR-----KLDGFPLLRR 65
Query: 147 ---INLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ + +N + L L EL L N L
Sbjct: 66 LKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 5e-06
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 96 LQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK---INLQS 151
++EL+L + G I L+ L L L + NL L K + L
Sbjct: 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-----SVSNLPKLPKLKKLELSE 80
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + G L L +L L+L N+L+
Sbjct: 81 NRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 6e-06
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Query: 86 LAPELGLLTY--LQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL- 141
+ EL T ++EL+L + + G + + L+ L LT I NL
Sbjct: 7 IHLELRNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-----SIANLP 61
Query: 142 --TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
L K+ L N ++G L +L L+L N+++
Sbjct: 62 KLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRM--LVFDYASNGTLYEHLHYGERCQVSWTR 463
QRE NH N +L+ YC L+ + GTL+ + + T
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 464 R--MKIVIGIARGLKYLH 479
+ +++GI RGL+ +H
Sbjct: 134 DQILWLLLGICRGLEAIH 151
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRR 464
+ E+ + I +E G + + ++++Y N ++ + Y ++T
Sbjct: 91 KNELQIITDIKNEYCLTCEGII-TNY--DEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 465 M------KIVIGIARGLKYLHTELG 483
+ I+ + Y+H E
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKN 172
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 23/123 (18%)
Query: 374 VYKGTMKGGPE---IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRE 429
V K +K A+ + KE + F E+ L ++ +H N LLG C
Sbjct: 41 VLKARIKKDGLRMDAAIKRM--KEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEH 97
Query: 430 SSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIGIARGL 475
L +YA +G L + L +S + + +ARG+
Sbjct: 98 RGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 155
Query: 476 KYL 478
YL
Sbjct: 156 DYL 158
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 44.2 bits (103), Expect = 7e-05
Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 13/108 (12%)
Query: 76 NISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIPKELG---LLKRLKILDLGTNQL 130
+ P L+ L + ++ + +L +L+ +D+ L
Sbjct: 232 DYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291
Query: 131 TG----PIPPEIGNLTGLVKINLQSNGLTG----RLPAELGNLISLEE 170
T + + + L IN++ N L+ L L I + +
Sbjct: 292 TDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSD 339
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 1e-04
Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 30/175 (17%)
Query: 64 ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILH-------GNNLIGIIPKEL-- 114
+ L+I G L L++L+L+ + + +
Sbjct: 189 KKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248
Query: 115 GLLKRLKILDLGTNQLTGPIPPEIGN---LTGLVKINLQSNGLTGR----LPAELGNLIS 167
LK L + + + L L +++ + LT L + +
Sbjct: 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKH 308
Query: 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNF 222
L+ +++ N L +L +S + D Y++
Sbjct: 309 LKFINMKYNYLSDE--------------MKKELQKSLPMKIDVSDSQEYDDDYSY 349
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVF--DYASNGTLYEHL----HYGERCQ 458
F+ E L + H N + + + +V + ++GTL +L +
Sbjct: 72 FKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVL 131
Query: 459 VSWTRRMKIVIGIARGLKYLHTELGPP 485
SW R+ I +GL++LHT PP
Sbjct: 132 RSWCRQ------ILKGLQFLHTR-TPP 151
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 521 | |||
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.98 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 99.98 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.97 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 99.97 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 99.97 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 99.97 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.97 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 99.97 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.96 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.96 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.95 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.95 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.95 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.95 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.95 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.94 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.94 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.94 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.94 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.94 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.94 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.94 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.94 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.94 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.94 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.94 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.94 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.93 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.93 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.93 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.93 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.93 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.93 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.93 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.93 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.93 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.93 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.93 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.93 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.93 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.93 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.93 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.93 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.93 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.93 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.93 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.93 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.93 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.93 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.93 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.93 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.93 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.93 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.93 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.93 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.93 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.93 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.93 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.93 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.93 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.93 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.93 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.93 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.93 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.93 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.93 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.93 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.93 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.92 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.92 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.92 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.92 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.92 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.92 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.92 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.92 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.92 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.92 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.92 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.92 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.92 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.92 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.92 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.92 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.92 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.92 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.92 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.92 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.92 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.92 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.92 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.92 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.92 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.92 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.92 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.92 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.92 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.92 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.92 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.92 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.92 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.92 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.92 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.92 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.92 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.92 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.92 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.92 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.92 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.92 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.92 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.92 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.92 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.92 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.92 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.92 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.92 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.92 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.92 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.92 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.92 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.92 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.92 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.92 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.92 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.92 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.92 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.92 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.92 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.92 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.92 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.92 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.92 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.92 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.92 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.92 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.91 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.91 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.91 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.91 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.91 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.91 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.91 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.91 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.91 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.91 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.91 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.91 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.91 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.91 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.91 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.91 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.91 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.91 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.91 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.91 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.91 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.91 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.91 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.91 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.91 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.91 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.91 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.91 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.91 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.91 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.91 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.91 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.91 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.91 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.91 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.91 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.91 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.91 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.91 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.91 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.91 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.91 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.91 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.91 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.91 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.91 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.91 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.91 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.91 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.91 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.91 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.91 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.91 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.91 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.91 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.91 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.91 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.91 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.91 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.91 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.91 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.91 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.91 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.9 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.9 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.9 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.9 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.9 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.9 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.9 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.9 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.9 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.9 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.9 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.9 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.9 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.9 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.9 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.9 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.9 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.9 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.9 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.9 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.9 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.9 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.89 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.89 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.89 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.89 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.89 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.89 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.89 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.89 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.89 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.89 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.89 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.89 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.89 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.88 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.88 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.88 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.88 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.88 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.88 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.88 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.88 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.88 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.87 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.87 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.87 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.87 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.87 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.87 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.87 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.87 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.86 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.85 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.84 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.84 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.84 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.84 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.83 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.83 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.82 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.82 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.82 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.82 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.82 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.82 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.81 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.81 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.81 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.81 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.81 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.81 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.81 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.8 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.8 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.8 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.8 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.8 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.8 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.8 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.8 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.8 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.8 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.79 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.79 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.79 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.79 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.79 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.78 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.78 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.78 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.78 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.78 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.78 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.77 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.77 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.77 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.77 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.77 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.77 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.77 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.77 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.77 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.76 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.76 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.76 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.76 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.76 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.76 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.75 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.75 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.75 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.75 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.74 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.74 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.74 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.74 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.73 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.73 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.73 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.73 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.72 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.72 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.71 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.71 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.7 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.7 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.69 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.69 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.69 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.69 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.69 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.69 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.69 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.69 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.68 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.68 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.68 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.67 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.67 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.67 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.66 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.66 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.66 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.65 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.65 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.65 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.65 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.64 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.64 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.64 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.64 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.63 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.63 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.63 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.63 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.62 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.61 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.61 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.61 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.61 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.6 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.59 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.59 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.59 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.59 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.58 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.58 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.58 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.58 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.57 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.53 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.52 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.51 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.51 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.51 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.5 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.49 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.4 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.4 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.35 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.33 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.26 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.19 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.15 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.13 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.09 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.01 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.86 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.85 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.79 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.78 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.72 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.65 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.62 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.55 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.55 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.54 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.53 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.5 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.49 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.48 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.41 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.38 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.36 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.34 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.25 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.19 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.88 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.88 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.81 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.69 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.64 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.58 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.42 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.26 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.15 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.13 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.1 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 97.09 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 97.05 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.03 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.02 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.93 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.91 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 96.82 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.71 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 96.56 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.49 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 96.47 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.41 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 96.4 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 96.33 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.28 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 94.36 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 94.06 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 91.64 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 88.33 | |
| 4ano_A | 219 | ESSB; membrane protein, membrane secretion, ESS ty | 87.24 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 84.01 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 81.81 |
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=294.96 Aligned_cols=152 Identities=26% Similarity=0.343 Sum_probs=130.7
Q ss_pred HHhhhhhhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC
Q 009972 358 ACEDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431 (521)
Q Consensus 358 ~~~~f~~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 431 (521)
.+..|.+.||+|+||+||+|++. +++.||||++.... .....++|.+|+.++++++|||||+++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 33446688999999999999973 45789999985432 2234578999999999999999999999998877
Q ss_pred CCceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 009972 432 PFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (521)
Q Consensus 432 ~~~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NIL 497 (521)
..+||||||++|+|.++|+... ...++|.++++|+.|||+||+|||+. +||||||||+|||
T Consensus 103 --~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 103 --PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp --SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred --EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 7899999999999999996432 23589999999999999999999999 9999999999999
Q ss_pred ecCCCCeeeCCCchhhhccc
Q 009972 498 LTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 498 ld~~~~~kl~DfGla~~~~~ 517 (521)
||+++++||+|||+|+.+..
T Consensus 178 l~~~~~~Ki~DFGlar~~~~ 197 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYA 197 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGG
T ss_pred ECCCCCEEECCcccceeccC
Confidence 99999999999999997643
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-35 Score=285.83 Aligned_cols=146 Identities=23% Similarity=0.330 Sum_probs=127.3
Q ss_pred hhhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 363 SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
.+.||+|+||+||+|++. ++..||||++... .....++|.+|++++++++|||||+++|+|.+.+ ..+
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~~ 91 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--PLI 91 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SEE
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--EEE
Confidence 378999999999999874 3678999998432 2345678999999999999999999999999877 799
Q ss_pred EEEeeCCCCChhhhhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCee
Q 009972 437 LVFDYASNGTLYEHLHYG-----------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~k 505 (521)
||||||++|+|.++|+.. ....++|.++++|+.|||+||+|||+. +||||||||+|||||+++++|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 999999999999999742 234699999999999999999999999 999999999999999999999
Q ss_pred eCCCchhhhccc
Q 009972 506 VSPLCLSFLLVS 517 (521)
Q Consensus 506 l~DfGla~~~~~ 517 (521)
|+|||+|+.+.+
T Consensus 169 i~DFGla~~~~~ 180 (299)
T 4asz_A 169 IGDFGMSRDVYS 180 (299)
T ss_dssp ECCCSCHHHHTG
T ss_pred ECCcccceecCC
Confidence 999999997654
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=287.20 Aligned_cols=146 Identities=20% Similarity=0.286 Sum_probs=124.0
Q ss_pred hhhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 363 SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
.+.||+|+||+||+|+++ ++..||||++... .....++|.+|+++|++++|||||+++|+|.+.+ ..+
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~~ 119 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR--PLL 119 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SEE
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEE
Confidence 378999999999999875 3678999998432 2345678999999999999999999999999877 799
Q ss_pred EEEeeCCCCChhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 009972 437 LVFDYASNGTLYEHLHYGE-------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~ 503 (521)
||||||++|+|.++++... ..+++|.++++|+.|||+||+|||+. +||||||||+|||||++++
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 9999999999999997432 24699999999999999999999998 9999999999999999999
Q ss_pred eeeCCCchhhhccc
Q 009972 504 PKVSPLCLSFLLVS 517 (521)
Q Consensus 504 ~kl~DfGla~~~~~ 517 (521)
+||+|||+|+.+..
T Consensus 197 ~Ki~DFGla~~~~~ 210 (329)
T 4aoj_A 197 VKIGDFGMSRDIYS 210 (329)
T ss_dssp EEECCCC-------
T ss_pred EEEcccccceeccC
Confidence 99999999997643
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=281.62 Aligned_cols=143 Identities=28% Similarity=0.420 Sum_probs=125.1
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||+||+|++++ .||||.+.... ......++|.+|++++++++|||||+++|+|.++ ..+||||||
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVmEy~ 113 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVTQWC 113 (307)
T ss_dssp EEECCCCSSSEEEEEESSS--EEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEECC
T ss_pred eeEEeeCCCcEEEEEEECC--cEEEEEEEecC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEEEcC
Confidence 4789999999999999865 59999885332 2334567899999999999999999999998654 579999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++|+... ..++|.++.+|+.|||+||+|||+. +||||||||+|||||+++++||+|||+|+.+.
T Consensus 114 ~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 114 EGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp SSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred CCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 9999999997443 3599999999999999999999998 99999999999999999999999999998764
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=283.70 Aligned_cols=147 Identities=19% Similarity=0.248 Sum_probs=126.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++..... .....+.|.+|++++++++|||||++++++.+++ ..|||||||
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yiVmEy~ 105 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYIVMDYC 105 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHC--CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEEeCC
Confidence 78999999999999986 689999999854432 2344678999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.......+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+.+.+
T Consensus 106 ~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 106 EGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp TTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 999999999765555689999999999999999999999 999999999999999999999999999998754
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=271.57 Aligned_cols=151 Identities=25% Similarity=0.264 Sum_probs=128.0
Q ss_pred hhhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC--CCCceEEE
Q 009972 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLV 438 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lv 438 (521)
|.+.||+|+||+||+|++. ++..||+|++..... .....+.|.+|++++++++|||||+++++|.+. .....+||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 3467999999999999986 688999999854332 234457899999999999999999999998652 11257999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld-~~~~~kl~DfGla~~~~~ 517 (521)
||||++|+|.++++... .+++..+..|+.||+.||+|||++ .++||||||||+||||+ +++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999999997543 589999999999999999999997 23499999999999998 479999999999997654
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=274.37 Aligned_cols=148 Identities=22% Similarity=0.223 Sum_probs=131.5
Q ss_pred hhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 361 DFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 361 ~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+|. +.||+|+||+||+|+.. +|+.||||.+..... ......+.+.+|++++++++|||||++++++.+++ ..|+
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yi 109 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYF 109 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 454 88999999999999986 789999999854321 11233567999999999999999999999999887 8999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||||+++|+|.+++.... .+++.+...|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 110 vmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp EECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 999999999999997543 499999999999999999999999 99999999999999999999999999999874
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=274.15 Aligned_cols=145 Identities=23% Similarity=0.315 Sum_probs=122.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC--CceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~ey 441 (521)
+.||+|+||+||+|++ +|+.||||++.... .....+.+|+..+.+++|||||+++|+|.+++. ...+|||||
T Consensus 9 ~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEEECSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 7899999999999998 57899999984321 112234456777788999999999999986542 147999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|++|+|.++++.. .++|.++.+|+.|+|+||+|||+.+ .++||||||||+|||||+++++||+|||+|+...
T Consensus 83 ~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 83 HEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999999743 4899999999999999999999863 5699999999999999999999999999998765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 160 ~ 160 (303)
T 3hmm_A 160 S 160 (303)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7e-33 Score=275.89 Aligned_cols=142 Identities=17% Similarity=0.254 Sum_probs=128.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.+ +|+.||||++...... ..+.+.+|+.+|++++|||||++++++.+.+ ..|||||||
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy~ 153 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFL 153 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchh----HHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeCC
Confidence 67999999999999997 7899999998644322 2345889999999999999999999999887 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... .+++.++..|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+.+..
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 999999999743 489999999999999999999999 999999999999999999999999999997653
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-32 Score=267.56 Aligned_cols=152 Identities=17% Similarity=0.237 Sum_probs=124.2
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---- 432 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 432 (521)
++|. +.||+|+||+||+|+.+ +|+.||||++..... ....+.+.+|++++++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 3455 78999999999999986 789999999864432 2345679999999999999999999999865431
Q ss_pred ------CceEEEEeeCCCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCee
Q 009972 433 ------FTRMLVFDYASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 433 ------~~~~lv~ey~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~k 505 (521)
...|+||||+++|+|.+++..... ...++..+..|+.||++||+|||+. +|+||||||+|||++.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 136899999999999999975432 3457788899999999999999999 999999999999999999999
Q ss_pred eCCCchhhhccc
Q 009972 506 VSPLCLSFLLVS 517 (521)
Q Consensus 506 l~DfGla~~~~~ 517 (521)
|+|||+|+.+..
T Consensus 159 l~DFGla~~~~~ 170 (299)
T 4g31_A 159 VGDFGLVTAMDQ 170 (299)
T ss_dssp ECCCCCC-----
T ss_pred EccCccceecCC
Confidence 999999998754
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-32 Score=277.56 Aligned_cols=142 Identities=17% Similarity=0.254 Sum_probs=128.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.+ +|+.||||++...... ..+.+.+|+.+|++++|||||++++++.+.+ ..|||||||
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~iVmEy~ 230 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFL 230 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchh----HHHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEEEEEeCC
Confidence 68999999999999996 6899999998644322 2345889999999999999999999999887 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.++++.. .+++.++..|+.||+.||+|||+. +||||||||+||||+.++.+||+|||+|+.+..
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 999999999643 389999999999999999999999 999999999999999999999999999997653
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-32 Score=271.81 Aligned_cols=138 Identities=18% Similarity=0.167 Sum_probs=123.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.+ +|+.||||++..... +.+|+.++++++|||||++++++.+.+ ..|||||||
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy~ 132 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGP--WVNIFMELL 132 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEecc
Confidence 67999999999999986 689999999853221 247999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-~~kl~DfGla~~~~~ 517 (521)
++|+|.++++... .+++.+...|+.||+.||+|||+. +||||||||+||||+.++ .+||+|||+|+.+.+
T Consensus 133 ~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 133 EGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999997543 599999999999999999999999 999999999999999998 699999999997653
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-32 Score=261.71 Aligned_cols=145 Identities=17% Similarity=0.262 Sum_probs=121.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||+|++...... .....+.+.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~ivmEy~ 95 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMVIEYA 95 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEEeCC
Confidence 78999999999999986 7899999998543321 2234567999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.... .+++.+...++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+...+
T Consensus 96 -~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 96 -GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp -CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred -CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 579999997543 599999999999999999999999 999999999999999999999999999997654
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-32 Score=271.77 Aligned_cols=159 Identities=18% Similarity=0.229 Sum_probs=131.1
Q ss_pred CHHHHHHHHhhhh--hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC-Cccc
Q 009972 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTG 421 (521)
Q Consensus 351 ~~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv 421 (521)
+..+++...++|. +.||+|+||+||+|++.+ ++.||||++.... .....++|.+|+++|.+++| ||||
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV 131 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVV 131 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEE
Confidence 3344444445554 889999999999998753 3579999884322 22345679999999999965 8999
Q ss_pred eeeeEeecCCCCceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 009972 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFT 487 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 487 (521)
+++|+|..++. ..++|||||++|+|.++|+... ...++|.+++.|+.|||+||+|||+. +||
T Consensus 132 ~l~g~~~~~~~-~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~ii 207 (353)
T 4ase_A 132 NLLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCI 207 (353)
T ss_dssp CEEEEECCTTS-CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred EEEEEEEecCC-EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---Cee
Confidence 99999976431 5799999999999999997421 24589999999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 488 ISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 488 H~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||||||+|||+++++++||+|||+|+.+.
T Consensus 208 HRDLK~~NILl~~~~~vKi~DFGlar~~~ 236 (353)
T 4ase_A 208 HRDLAARNILLSEKNVVKICDFGLARDIY 236 (353)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred cCccCccceeeCCCCCEEECcchhhhhcc
Confidence 99999999999999999999999999764
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=264.72 Aligned_cols=218 Identities=29% Similarity=0.515 Sum_probs=191.5
Q ss_pred CChhHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCC--ccceeeCCCC--CCEEEEEecCCCCcc--cCCccccCCCCCC
Q 009972 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH--WTGIACSDAR--DRVLKINISGSSLKG--FLAPELGLLTYLQ 97 (521)
Q Consensus 24 ~~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c~--w~gv~C~~~~--~~l~~L~L~~n~l~~--~~p~~l~~l~~L~ 97 (521)
|.++|..||++||+++. ||. .+.+|+. +.+||. |.||+|+... ++|+.|+|++|.+++ .+|+.++.+++|+
T Consensus 3 c~~~~~~aL~~~k~~~~-~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHhcC-Ccc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 67889999999999995 665 6899975 467998 9999998543 799999999999999 8999999999999
Q ss_pred EEEcCC-CcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCC
Q 009972 98 ELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 98 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
+|+|++ |.+.+.+|..|..+++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccCCccccCCccccc---cCCCcccCCCccCC
Q 009972 177 RLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 177 ~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~ 246 (521)
+++|.+|..... ....+..+++++|.+++ +..++ |+.|++++|.+++.+|..+. +++.+++++|.+..
T Consensus 160 ~l~~~~p~~l~~-l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 160 RISGAIPDSYGS-FSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCEEECCGGGGC-CCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cccCcCCHHHhh-hhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 999999875433 22367888999998863 44565 99999999999988887654 55667888887765
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=267.79 Aligned_cols=144 Identities=17% Similarity=0.117 Sum_probs=120.8
Q ss_pred hhhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||+||+|+.. +++.||+|.+...... ......+.+|++++++++|||||++++++.+++ ..|+||
T Consensus 30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~ivm 105 (304)
T 3ubd_A 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG--KLYLIL 105 (304)
T ss_dssp EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE--EEECC------CCCCCCCCTTEECEEEEEEETT--EEEEEE
T ss_pred EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC--hHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEE
Confidence 88999999999999873 4678999998543321 112335889999999999999999999999877 899999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.... .+++.+...|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+...
T Consensus 106 Ey~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 106 DFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp CCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 9999999999997543 489999999999999999999999 99999999999999999999999999998653
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=258.68 Aligned_cols=145 Identities=18% Similarity=0.224 Sum_probs=125.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----CCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
+.||+|+||+||+|+.. +|+.||||++..... .....+.+.+|+++|++++|||||++++++.... ....|||
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECcccc--chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEE
Confidence 78999999999999986 799999999843322 2234567899999999999999999999986431 2268999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||||+ |+|.+++... ..+++.++..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+.+.
T Consensus 138 mE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 138 LDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 99996 6899999644 3599999999999999999999999 99999999999999999999999999998764
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-29 Score=265.65 Aligned_cols=150 Identities=19% Similarity=0.116 Sum_probs=127.0
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHH---HHHHHHHhccCCCccceeeeEeecCCCC
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYF---QREVADLARINHENTGKLLGYCRESSPF 433 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~---~~E~~~l~~l~H~niv~l~g~~~~~~~~ 433 (521)
++|. ++||+|+||+||+|+.+ +|+.||||++...... .......+ .+++.+++.++|||||++++++.+.+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~-~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcc-hhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 4455 78999999999999997 6899999998543311 11112223 34467777889999999999999887
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 434 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
..|+||||+++|+|.++|.... .+++.....|+.||+.||+|||+. +||||||||+|||||++|++||+|||+|+
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 8999999999999999997543 489999999999999999999999 99999999999999999999999999998
Q ss_pred hccc
Q 009972 514 LLVS 517 (521)
Q Consensus 514 ~~~~ 517 (521)
.+..
T Consensus 341 ~~~~ 344 (689)
T 3v5w_A 341 DFSK 344 (689)
T ss_dssp ECSS
T ss_pred ecCC
Confidence 7654
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.9e-29 Score=250.08 Aligned_cols=142 Identities=15% Similarity=0.178 Sum_probs=123.9
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCC
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 432 (521)
+.|. +.||+|+||+||+|+.+ +++.||+|++.... ...++.+|++++..+ +|||||++++++.+.+
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~- 93 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND- 93 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT-
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC-
Confidence 4454 78999999999999864 46789999884322 234688999999998 6999999999998877
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeeeCCCch
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCL 511 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~-~~~kl~DfGl 511 (521)
..++||||+++|+|.++++ .+++.+...|+.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 94 -~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 94 -HVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp -EEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred -EEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 8999999999999999984 389999999999999999999999 99999999999999877 7999999999
Q ss_pred hhhccc
Q 009972 512 SFLLVS 517 (521)
Q Consensus 512 a~~~~~ 517 (521)
|+...+
T Consensus 165 a~~~~~ 170 (361)
T 4f9c_A 165 AQGTHD 170 (361)
T ss_dssp CEECTT
T ss_pred CcccCC
Confidence 986543
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-28 Score=272.01 Aligned_cols=215 Identities=25% Similarity=0.369 Sum_probs=167.9
Q ss_pred CCChhHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCCccceeeCCCCCCEEEEEecCCCCccc---CC------------
Q 009972 23 AFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGF---LA------------ 87 (521)
Q Consensus 23 ~~~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c~w~gv~C~~~~~~l~~L~L~~n~l~~~---~p------------ 87 (521)
++.++|+.||++||+++. ||. .+++|+. +.+||.|.||+|+ .++|+.|+|+++.+.|. +|
T Consensus 8 ~~~~~~~~all~~k~~~~-~~~-~l~~W~~-~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLP-DKN-LLPDWSS-NKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp CCHHHHHHHHHHHHTTCS-CTT-SSTTCCT-TSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cCCHHHHHHHHHHHhhCC-Ccc-cccCCCC-CCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 356789999999999996 777 8999974 5689999999998 68999999999999886 44
Q ss_pred -----------ccccCCCCCCEEEcCCCcccccCCc--ccCCCCCCcEEEccCCCCCCCCCccc-CCCcCCceEeccccc
Q 009972 88 -----------PELGLLTYLQELILHGNNLIGIIPK--ELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNG 153 (521)
Q Consensus 88 -----------~~l~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~ 153 (521)
+.++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4677888999999999999888888 88999999999999999988888776 788899999999999
Q ss_pred CCCCCchh---hhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC----cccCCCCCEEeccCCccccC
Q 009972 154 LTGRLPAE---LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 154 l~g~~p~~---~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~----~~~l~~L~~L~ls~N~l~g~ 226 (521)
+++..|.. +.++++|++|++++|++++.+|... ..+++.+++++|.+++ +..+++|++|++++|.+++.
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~----l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSR----CVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTT----CTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSC
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCccc----CCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCc
Confidence 98888777 6778888888888888876665422 2456666777776654 34566677777777777666
Q ss_pred Cccccc---cCCCcccCCCccCC
Q 009972 227 IPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 227 ip~~l~---~l~~l~~~~N~l~~ 246 (521)
+|..+. +|+.+++++|.+.+
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~ 261 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVG 261 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEE
T ss_pred ccHHHhcCCCCCEEECCCCcccC
Confidence 665543 34445566665543
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-28 Score=257.68 Aligned_cols=148 Identities=14% Similarity=0.250 Sum_probs=130.2
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.+ +|+.||+|++.... ....+.+.+|+.+|+.++|||||++++++.+.+ ..+
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~ 230 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMV 230 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEE
Confidence 3454 78999999999999996 78999999985432 223467899999999999999999999999887 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC--CCeeeCCCchhhh
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED--FSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~--~~~kl~DfGla~~ 514 (521)
+|||||++|+|.+++.... ..+++.+...|+.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 231 iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp EEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred EEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 9999999999999996432 3599999999999999999999999 99999999999999854 8999999999998
Q ss_pred ccc
Q 009972 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
+.+
T Consensus 307 ~~~ 309 (573)
T 3uto_A 307 LDP 309 (573)
T ss_dssp CCT
T ss_pred ccC
Confidence 754
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-28 Score=240.33 Aligned_cols=166 Identities=34% Similarity=0.560 Sum_probs=145.1
Q ss_pred cccccCHHHHHHHHhhhh--hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCcccee
Q 009972 346 DVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423 (521)
Q Consensus 346 ~~~~~~~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 423 (521)
+...|++.++....++|. +.||+|+||.||+|+.++++.||+|++...... .....+.+|++++.+++||||+++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccce
Confidence 456788999999999887 899999999999999888999999998543221 122368999999999999999999
Q ss_pred eeEeecCCCCceEEEEeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC
Q 009972 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (521)
Q Consensus 424 ~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~ 501 (521)
++++...+ ..++||||+++|+|.++++... ...++|..+..|+.+++.||+|||+.+.++|+||||||+|||++++
T Consensus 93 ~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 93 RGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp CEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred EEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 99998877 7899999999999999998543 3459999999999999999999999888899999999999999999
Q ss_pred CCeeeCCCchhhhcc
Q 009972 502 FSPKVSPLCLSFLLV 516 (521)
Q Consensus 502 ~~~kl~DfGla~~~~ 516 (521)
+.+||+|||+++.+.
T Consensus 171 ~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 171 FEAVVGDFGLAKLMD 185 (326)
T ss_dssp CCEEECCCSSCEECC
T ss_pred CCEEeccCccccccC
Confidence 999999999998764
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-28 Score=261.84 Aligned_cols=217 Identities=21% Similarity=0.343 Sum_probs=183.6
Q ss_pred hhHHHHHHHHHHhhccCCCCC-------CCCCCCCCCCCCCc---cceeeCCCCCCEEEEEecCCCCcccCCccccCCCC
Q 009972 26 TNEFWALTTFKEAIYEDPHLV-------LSNWNALDADPCHW---TGIACSDARDRVLKINISGSSLKGFLAPELGLLTY 95 (521)
Q Consensus 26 ~~~~~~L~~~k~~~~~~~~~~-------l~~W~~~~~~~c~w---~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~ 95 (521)
..|+.||.++++++..+.+.. ..+|+. +.+||.| .||+|+. .++|+.|+|++++++|.+|++++.|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~-~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNS-NGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECT-TCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcC-CCCEEEEEecCcccCCcCChHHhcCcc
Confidence 368999999999986543322 347986 5789999 9999986 489999999999999999999999999
Q ss_pred CCEEEcCCC-----------------------------------------------------------------------
Q 009972 96 LQELILHGN----------------------------------------------------------------------- 104 (521)
Q Consensus 96 L~~L~L~~N----------------------------------------------------------------------- 104 (521)
|++|+|++|
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 999999998
Q ss_pred -------cccccCCcccCCCCCCcEEEccCCCCCCC-----------------CCcccC--CCcCCceEecccccCCCCC
Q 009972 105 -------NLIGIIPKELGLLKRLKILDLGTNQLTGP-----------------IPPEIG--NLTGLVKINLQSNGLTGRL 158 (521)
Q Consensus 105 -------~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~Ls~N~l~g~~ 158 (521)
+++| +|.+|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|+++|.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 4445 899999999999999999999986 999999 9999999999999999999
Q ss_pred chhhhCCCCCCEEeCCCCc-CCc-cCCCCCCC----cccccccccccccCCCCCc------ccCCCCCEEeccCCccccC
Q 009972 159 PAELGNLISLEELHLDRNR-LQG-AVPAGSNS----GYTANIHGMYASSANLTGL------CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 159 p~~~~~l~~L~~L~Ls~N~-l~g-~~p~~~~~----~~~~~l~~l~l~~n~l~~~------~~l~~L~~L~ls~N~l~g~ 226 (521)
|..|+++++|++|+|++|+ ++| .+|..... ....++..+++++|.++.+ ..+++|+.|++++|+++|.
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ 345 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGK 345 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEE
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccc
Confidence 9999999999999999998 998 78864321 0125788889999888643 4578899999999999988
Q ss_pred Ccccc---ccCCCcccCCCccCC
Q 009972 227 IPKCL---EYLPSTSFQGNCLQN 246 (521)
Q Consensus 227 ip~~l---~~l~~l~~~~N~l~~ 246 (521)
+| .+ .+|+.+++++|.+..
T Consensus 346 ip-~~~~l~~L~~L~L~~N~l~~ 367 (636)
T 4eco_A 346 LP-AFGSEIKLASLNLAYNQITE 367 (636)
T ss_dssp CC-CCEEEEEESEEECCSSEEEE
T ss_pred hh-hhCCCCCCCEEECCCCcccc
Confidence 88 55 456677888887663
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-27 Score=230.56 Aligned_cols=164 Identities=30% Similarity=0.455 Sum_probs=143.6
Q ss_pred ccccCHHHHHHHHhhhh--------hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCC
Q 009972 347 VVRFSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418 (521)
Q Consensus 347 ~~~~~~~~l~~~~~~f~--------~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ 418 (521)
...|++.++.+++++|+ +.||+|+||.||+|+. +++.||+|++............+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 46789999999999997 4699999999999987 57889999985443222334567899999999999999
Q ss_pred ccceeeeEeecCCCCceEEEEeeCCCCChhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 009972 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG-ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (521)
Q Consensus 419 niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NIL 497 (521)
||+++++++.+.+ ..++||||+++|+|.+++... ...+++|..+..|+.+++.||+|||+. +|+||||||+||+
T Consensus 91 ~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 91 NLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999998876 789999999999999999743 234689999999999999999999999 9999999999999
Q ss_pred ecCCCCeeeCCCchhhhcc
Q 009972 498 LTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 498 ld~~~~~kl~DfGla~~~~ 516 (521)
+++++.+||+|||+++...
T Consensus 166 i~~~~~~kl~Dfg~~~~~~ 184 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASE 184 (307)
T ss_dssp ECTTCCEEECCCTTCEECC
T ss_pred EcCCCcEEEeecccccccc
Confidence 9999999999999988654
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=229.23 Aligned_cols=143 Identities=23% Similarity=0.322 Sum_probs=128.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|++... .....+.|.+|++++.+++||||+++++++.+.+ ..++||||+
T Consensus 16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 89 (310)
T 3s95_A 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFITEYI 89 (310)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred ceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEEEEec
Confidence 78999999999999986 6889999987332 2345678999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... ..++|.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 90 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 90 KGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp TTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred CCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 9999999997533 3589999999999999999999999 99999999999999999999999999998654
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-27 Score=235.51 Aligned_cols=154 Identities=31% Similarity=0.544 Sum_probs=133.6
Q ss_pred HHHHHHhhhh--hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC
Q 009972 354 ELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431 (521)
Q Consensus 354 ~l~~~~~~f~--~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 431 (521)
++...+++|. +.||+|+||.||+|+.++++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES----SQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC----SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3444555665 7899999999999999889999999874432 223567999999999999999999999998776
Q ss_pred CCceEEEEeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCC
Q 009972 432 PFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 432 ~~~~~lv~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~Df 509 (521)
..++||||+++|+|.+++.... ...++|.++..++.|+++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 109 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 109 --EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp --CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCC
T ss_pred --eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 7899999999999999997443 23589999999999999999999999 9999999999999999999999999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++...
T Consensus 184 g~~~~~~ 190 (321)
T 2qkw_B 184 GISKKGT 190 (321)
T ss_dssp TTCEECS
T ss_pred ccccccc
Confidence 9998643
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-27 Score=239.32 Aligned_cols=220 Identities=18% Similarity=0.255 Sum_probs=186.0
Q ss_pred CCChhHHHHHHHHHHhhccCCCCCCCCCC---CCCCCCCCccceeeCC--------CCCCEEEEEecCCCCcccCCcccc
Q 009972 23 AFATNEFWALTTFKEAIYEDPHLVLSNWN---ALDADPCHWTGIACSD--------ARDRVLKINISGSSLKGFLAPELG 91 (521)
Q Consensus 23 ~~~~~~~~~L~~~k~~~~~~~~~~l~~W~---~~~~~~c~w~gv~C~~--------~~~~l~~L~L~~n~l~~~~p~~l~ 91 (521)
++..+|..||++||+.+..|+...+++|. ....++|.|.|+.|.. ...+|+.|+|++|.++ .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 46678999999999999778877778894 3456899999999951 2468999999999998 5888899
Q ss_pred CCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhC-------
Q 009972 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGN------- 164 (521)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~------- 164 (521)
.+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 9999999999999999 89999999999999999999999 88999999999999999999999999988765
Q ss_pred --CCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc----ccCCCCCEEeccCCccccCCccccc---cCC
Q 009972 165 --LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKCLE---YLP 235 (521)
Q Consensus 165 --l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~----~~l~~L~~L~ls~N~l~g~ip~~l~---~l~ 235 (521)
+++|++|+|++|+++ .+|..... ..++..+++++|.++++ ..+++|+.|++++|++.+.+|..+. +|+
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~--l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIAN--LQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGG--CTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcC--CCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 999999999999998 77764322 35788889999988764 4688999999999999999997764 456
Q ss_pred CcccCCCccCCCC
Q 009972 236 STSFQGNCLQNKD 248 (521)
Q Consensus 236 ~l~~~~N~l~~~~ 248 (521)
.+++++|.+.+..
T Consensus 257 ~L~L~~n~~~~~~ 269 (328)
T 4fcg_A 257 RLILKDCSNLLTL 269 (328)
T ss_dssp EEECTTCTTCCBC
T ss_pred EEECCCCCchhhc
Confidence 6788888665543
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=230.51 Aligned_cols=158 Identities=15% Similarity=0.203 Sum_probs=137.7
Q ss_pred cccCHHHHHHHHhh----------hh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhc
Q 009972 348 VRFSRQELEVACED----------FS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLAR 414 (521)
Q Consensus 348 ~~~~~~~l~~~~~~----------f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~ 414 (521)
+.++++++..+++. |. +.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHHHHHHHHHHHh
Confidence 56888899888865 22 57999999999999997 789999999854322 234568999999999
Q ss_pred cCCCccceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCC
Q 009972 415 INHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (521)
Q Consensus 415 l~H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~ 494 (521)
++||||+++++++...+ ..++||||+++|+|.+++... .++|..+..++.|++.||+|||+. +|+||||||+
T Consensus 99 l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~ 170 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSD 170 (321)
T ss_dssp CCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGG
T ss_pred CCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHH
Confidence 99999999999998877 899999999999999998632 489999999999999999999999 9999999999
Q ss_pred CeeecCCCCeeeCCCchhhhccc
Q 009972 495 AVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 495 NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||++.++.+||+|||+++.+..
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~ 193 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISK 193 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCS
T ss_pred HEEECCCCcEEEeeeeeeeeccc
Confidence 99999999999999999887643
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-27 Score=263.60 Aligned_cols=213 Identities=23% Similarity=0.314 Sum_probs=177.3
Q ss_pred ChhHHHHHHHHHHhhccCCCCCCCCCCCCC----CCC--CCc------------cceeeCCCCCCEEEEEecCCCCcccC
Q 009972 25 ATNEFWALTTFKEAIYEDPHLVLSNWNALD----ADP--CHW------------TGIACSDARDRVLKINISGSSLKGFL 86 (521)
Q Consensus 25 ~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~----~~~--c~w------------~gv~C~~~~~~l~~L~L~~n~l~~~~ 86 (521)
...|+.||++||+++. +| +|+..+ .+| |.| .||+|+. .++|+.|+|++|+++|.+
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEE
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcC
Confidence 3578999999999995 44 686543 456 999 9999986 689999999999999999
Q ss_pred CccccCCCCCCEEEc-CCCccccc--------------------------------------------------------
Q 009972 87 APELGLLTYLQELIL-HGNNLIGI-------------------------------------------------------- 109 (521)
Q Consensus 87 p~~l~~l~~L~~L~L-~~N~l~~~-------------------------------------------------------- 109 (521)
|++|++|++|++|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 77766554
Q ss_pred --------------------CCcccCCCCCCcEEEccCCCCCC-----------------CCCcccC--CCcCCceEecc
Q 009972 110 --------------------IPKELGLLKRLKILDLGTNQLTG-----------------PIPPEIG--NLTGLVKINLQ 150 (521)
Q Consensus 110 --------------------~p~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~L~Ls 150 (521)
+|..|+++++|++|+|++|+|+| .+|..++ ++++|++|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 88899999999999999999998 3999988 99999999999
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCc-CCc-cCCCCCCC-----cccccccccccccCCCCC------cccCCCCCEEe
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNR-LQG-AVPAGSNS-----GYTANIHGMYASSANLTG------LCHLSQLKVAD 217 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g-~~p~~~~~-----~~~~~l~~l~l~~n~l~~------~~~l~~L~~L~ 217 (521)
+|++.+.+|..|+++++|++|+|++|+ ++| .+|..... ....++..+++++|.++. +..+++|+.|+
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLD 579 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEE
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEE
Confidence 999999999999999999999999998 998 77753211 112367788888887764 34577888888
Q ss_pred ccCCccccCCccccc---cCCCcccCCCccCC
Q 009972 218 FSYNFFVGSIPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 218 ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~ 246 (521)
|++|+++ .+| .+. +|+.+++++|.+..
T Consensus 580 Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~ 609 (876)
T 4ecn_A 580 CVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEE 609 (876)
T ss_dssp CTTSCCC-BCC-CCCTTSEESEEECCSSCCSC
T ss_pred CCCCCcc-cch-hhcCCCcceEEECcCCcccc
Confidence 8888888 777 543 45567788887763
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-27 Score=245.21 Aligned_cols=158 Identities=15% Similarity=0.122 Sum_probs=134.2
Q ss_pred HHHHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEee
Q 009972 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428 (521)
Q Consensus 352 ~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 428 (521)
+.++...+++|. ++||+|+||+||+|+.+ +++.||+|++..... ......+.+.+|+.++..++||||++++++|.
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-LKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-HHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHh-hhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 445555566776 89999999999999997 578899999854221 11122334889999999999999999999999
Q ss_pred cCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCC
Q 009972 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~D 508 (521)
+.+ ..++||||+++|+|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+|||+|.++.+||+|
T Consensus 145 ~~~--~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDN--NLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSS--EEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCC--EEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 877 899999999999999999753 23589999999999999999999999 999999999999999999999999
Q ss_pred Cchhhhcc
Q 009972 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||+|+.+.
T Consensus 219 FGla~~~~ 226 (437)
T 4aw2_A 219 FGSCLKLM 226 (437)
T ss_dssp CTTCEECC
T ss_pred hhhhhhcc
Confidence 99997653
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=231.20 Aligned_cols=144 Identities=20% Similarity=0.226 Sum_probs=128.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||+|++..... .....+.+.+|+++++.++||||+++++++.+.+ ..++||||+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~e~~ 96 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYLIMEYA 96 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEECC
Confidence 78999999999999985 789999999854322 2334567899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 97 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 97 SGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp TTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 9999999996443 489999999999999999999999 99999999999999999999999999998654
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-26 Score=227.64 Aligned_cols=152 Identities=18% Similarity=0.255 Sum_probs=128.7
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---- 432 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 432 (521)
++|. +.||+|+||.||+|+.. +++.||||++.... .....+.+.+|++++++++||||+++++++.+...
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 4454 78999999999999997 78999999985433 22345679999999999999999999999865431
Q ss_pred ---------------------------------------------------CceEEEEeeCCCCChhhhhhcCCC-CCCC
Q 009972 433 ---------------------------------------------------FTRMLVFDYASNGTLYEHLHYGER-CQVS 460 (521)
Q Consensus 433 ---------------------------------------------------~~~~lv~ey~~~g~L~~~l~~~~~-~~l~ 460 (521)
...++||||+++|+|.+++..... ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 127999999999999999975432 3467
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 461 ~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 216 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 216 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSC
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCccccccc
Confidence 888999999999999999999 999999999999999999999999999987654
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-27 Score=240.68 Aligned_cols=155 Identities=16% Similarity=0.128 Sum_probs=131.5
Q ss_pred HHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC
Q 009972 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 354 ~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
++....++|. ++||+|+||+||+|+.+ +++.||+|++..... ......+.+.+|+.+++.++|||||++++++.+.
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhh-hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3333445565 78999999999999997 588999999854221 1111233588999999999999999999999987
Q ss_pred CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCc
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfG 510 (521)
+ ..++||||+++|+|.++++.. .+++..+..++.+++.||+|||+. +|+||||||+|||+|.++.+||+|||
T Consensus 142 ~--~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 142 R--YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp S--EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred C--EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 7 899999999999999999743 389999999999999999999999 99999999999999999999999999
Q ss_pred hhhhccc
Q 009972 511 LSFLLVS 517 (521)
Q Consensus 511 la~~~~~ 517 (521)
+|+.+..
T Consensus 214 ~a~~~~~ 220 (410)
T 3v8s_A 214 TCMKMNK 220 (410)
T ss_dssp TCEECCT
T ss_pred eeEeecc
Confidence 9987643
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=235.72 Aligned_cols=145 Identities=24% Similarity=0.349 Sum_probs=121.7
Q ss_pred hhhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. ++..||||.+.... .....++|.+|+.++++++||||+++++++...+ ..++||
T Consensus 51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 125 (373)
T 2qol_A 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVT 125 (373)
T ss_dssp EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ceEEEE
Confidence 78999999999999885 46789999984321 2344568999999999999999999999998876 789999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.++++... ..+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 126 e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 126 EYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp ECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred eCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 9999999999997433 3589999999999999999999999 999999999999999999999999999987653
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.4e-27 Score=241.16 Aligned_cols=159 Identities=16% Similarity=0.107 Sum_probs=134.9
Q ss_pred CHHHHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEe
Q 009972 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (521)
Q Consensus 351 ~~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~ 427 (521)
.+.++....++|. ++||+|+||+||+|+.+ +|+.||+|++..... ......+.+.+|..++..++||||+++++++
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~-~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM-LKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 3444444556676 78999999999999996 789999999854221 1112234588999999999999999999999
Q ss_pred ecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeC
Q 009972 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 428 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~ 507 (521)
.+.+ ..++||||+++|+|.+++.... ..+++..+..++.+|+.||+|||+. +|+||||||+|||+|+++++||+
T Consensus 131 ~~~~--~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 131 QDEN--YLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp ECSS--EEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeCC--EEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEe
Confidence 9877 8999999999999999997432 3589999999999999999999999 99999999999999999999999
Q ss_pred CCchhhhcc
Q 009972 508 PLCLSFLLV 516 (521)
Q Consensus 508 DfGla~~~~ 516 (521)
|||+++.+.
T Consensus 205 DFGla~~~~ 213 (412)
T 2vd5_A 205 DFGSCLKLR 213 (412)
T ss_dssp CCTTCEECC
T ss_pred echhheecc
Confidence 999998764
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-26 Score=221.07 Aligned_cols=142 Identities=20% Similarity=0.288 Sum_probs=127.8
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..+++.||+|++..... ..+++.+|++++.+++||||+++++++.+.+ ..++||||++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 88 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEFME 88 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEECCT
T ss_pred heecCCCccEEEEEEecCCCeEEEEEeccccc-----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEEEeCC
Confidence 78999999999999998888999999853221 2356999999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 89 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 157 (269)
T 4hcu_A 89 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 157 (269)
T ss_dssp TCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccc
Confidence 999999997433 3589999999999999999999999 99999999999999999999999999998654
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-26 Score=233.07 Aligned_cols=145 Identities=23% Similarity=0.251 Sum_probs=126.3
Q ss_pred hhhCcCCCeeEEEEEeC--------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCc
Q 009972 364 NIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||.||+|+.. ++..||+|.+... ......+++.+|+.++.++ +||||++++++|...+ .
T Consensus 87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~ 161 (370)
T 2psq_A 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--P 161 (370)
T ss_dssp EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT---CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS--S
T ss_pred eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC---cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC--C
Confidence 78999999999999863 3457999988432 1233456799999999999 8999999999998876 7
Q ss_pred eEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 009972 435 RMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 435 ~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~ 500 (521)
.++||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+|||+++
T Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE 238 (370)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECC
Confidence 899999999999999997432 13589999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhcc
Q 009972 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+++.+.
T Consensus 239 ~~~~kl~DFG~a~~~~ 254 (370)
T 2psq_A 239 NNVMKIADFGLARDIN 254 (370)
T ss_dssp TCCEEECCCSSCEETT
T ss_pred CCCEEEccccCCcccC
Confidence 9999999999998654
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=228.40 Aligned_cols=145 Identities=24% Similarity=0.350 Sum_probs=127.0
Q ss_pred hhhCcCCCeeEEEEEeC-C---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-G---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|++. + +..||||.+... ......+.|.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 129 (325)
T 3kul_A 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG---YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LAMIVT 129 (325)
T ss_dssp EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CCEEEE
T ss_pred eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC---CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--ccEEEe
Confidence 78999999999999985 2 345999998432 12344567999999999999999999999998776 789999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.++++... ..+++.++..|+.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 130 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 130 EYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp ECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred eCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 9999999999997443 3589999999999999999999999 999999999999999999999999999987643
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-26 Score=227.34 Aligned_cols=146 Identities=14% Similarity=0.155 Sum_probs=128.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||+|.+...... .....+.+.+|+.+++.++||||+++++++.+.+ ..++||||+
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv~e~~ 88 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMDYI 88 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEEEeCC
Confidence 78999999999999997 6899999998543211 1123456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++...+
T Consensus 89 ~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 89 EGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 9999999997543 489999999999999999999999 999999999999999999999999999987654
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-26 Score=224.20 Aligned_cols=146 Identities=18% Similarity=0.221 Sum_probs=129.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+..... ......+.|.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 93 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYLVMEYI 93 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEEEEeCC
Confidence 78999999999999986 688999999854332 22344568999999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 94 ~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 94 EGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp CSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 9999999997443 589999999999999999999999 999999999999999999999999999987643
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-26 Score=229.42 Aligned_cols=144 Identities=19% Similarity=0.113 Sum_probs=127.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.+ +|+.||+|.+..... ......+.+.+|+.+++.++||||+++++++.+.+ ..++||||+
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv~E~~ 87 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYA 87 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEEEeCC
Confidence 78999999999999987 689999999854321 11223457899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 88 NGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp TTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 9999999997433 489999999999999999999999 9999999999999999999999999999863
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-26 Score=224.20 Aligned_cols=141 Identities=16% Similarity=0.214 Sum_probs=126.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 99 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYL 99 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccc----cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEEEEECC
Confidence 68999999999999975 789999999854332 22456899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... .+++.++..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp TTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 999999999743 489999999999999999999999 99999999999999999999999999988654
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-26 Score=242.87 Aligned_cols=144 Identities=24% Similarity=0.331 Sum_probs=129.7
Q ss_pred hhhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+++. +..||||.+..... ..++|.+|+.++++++|||||+++++|.... ..++||||+
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~E~~ 298 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFM 298 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECC
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-----chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEEEEcc
Confidence 789999999999999974 78899999843221 2467999999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.++++......+++..+..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999865555699999999999999999999999 999999999999999999999999999987653
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-26 Score=239.59 Aligned_cols=143 Identities=14% Similarity=0.262 Sum_probs=127.4
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+++++..||||++.... ...+.|.+|+.++++++|||||++++++.. + ..++||||++
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~e~~~ 265 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIITEFMA 265 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEECCCT
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEEeecC
Confidence 7899999999999999888899999985322 135679999999999999999999999874 3 5899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.+
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 99999999754333589999999999999999999999 999999999999999999999999999997643
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-26 Score=227.48 Aligned_cols=143 Identities=20% Similarity=0.275 Sum_probs=125.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|.+..+... ...+.+.+|+.+++.++||||+++++++.+.+ ..++||||+
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~ 87 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYC 87 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccc---chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEEcC
Confidence 78999999999999987 7899999998544321 22356889999999999999999999999877 889999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ..+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 88 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 88 SGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp TTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred CCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 999999999643 3589999999999999999999999 99999999999999999999999999998653
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-26 Score=225.53 Aligned_cols=146 Identities=28% Similarity=0.396 Sum_probs=123.1
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|+. +++.||+|++..... .....++|.+|++++++++||||+++++++.+.+ ..++||||++
T Consensus 43 ~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~ 117 (309)
T 3p86_A 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVTEYLS 117 (309)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEEECCT
T ss_pred eEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEEecCC
Confidence 7899999999999987 577899999854322 2334567999999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.... ...+++..+..++.|++.||+|||+. + |+||||||+|||+++++.+||+|||+++....
T Consensus 118 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp TCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred CCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 999999997543 12489999999999999999999998 7 99999999999999999999999999986543
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-26 Score=235.67 Aligned_cols=144 Identities=21% Similarity=0.280 Sum_probs=127.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|++. +++.||||.+... ......++|.+|++++++++||||++++++|...+ ..++||||+
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 194 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRET---LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVMELV 194 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTT---SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEEECC
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEcccc---CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEEEEcC
Confidence 78999999999999997 7899999987432 12233456899999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 195 ~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 195 QGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp TTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 9999999997432 3589999999999999999999999 99999999999999999999999999998654
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-26 Score=231.62 Aligned_cols=145 Identities=13% Similarity=0.104 Sum_probs=128.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|+.++..++|||||++++++.+.+ ..++||||+
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lv~e~~ 97 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVVDLL 97 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEecC
Confidence 78999999999999987 588999999854321 11223467899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 98 ~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 98 LGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp TTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 9999999997543 489999999999999999999999 99999999999999999999999999998764
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-26 Score=230.50 Aligned_cols=148 Identities=18% Similarity=0.160 Sum_probs=128.7
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. ++||+|+||+||+|+.+ +++.||+|++..... ......+.+.+|..++..+ +||||+++++++.+.+ ..
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~ 99 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RL 99 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-cchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EE
Confidence 4454 78999999999999987 689999999854321 1222345688999999988 7999999999999877 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++||||+++|+|.+++.... .+++.++..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 99999999999999997443 489999999999999999999999 9999999999999999999999999999853
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.9e-26 Score=220.10 Aligned_cols=142 Identities=20% Similarity=0.311 Sum_probs=124.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..++..||+|++..... ..+++.+|++++.+++||||+++++++.+.+ ..++||||++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 102 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEYMA 102 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEECCCT
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEEeccC
Confidence 78999999999999999888999999853321 2356899999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 103 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 103 NGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp TCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 99999999742 23589999999999999999999999 99999999999999999999999999998654
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-26 Score=228.22 Aligned_cols=147 Identities=22% Similarity=0.262 Sum_probs=128.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc--chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|+.+ +|+.||+|.+....... .....+.+.+|+.++.+++||||+++++++.+.. ..++|||
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv~e 95 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--DVVLILE 95 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--EEEEEEE
Confidence 78999999999999997 68999999986543211 1123567999999999999999999999998877 8999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~----~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||+++++ .+||+|||+++.+.
T Consensus 96 ~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~ 170 (361)
T 2yab_A 96 LVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (361)
T ss_dssp CCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence 99999999999643 3589999999999999999999999 999999999999998877 79999999998765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 171 ~ 171 (361)
T 2yab_A 171 D 171 (361)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-26 Score=228.58 Aligned_cols=146 Identities=16% Similarity=0.119 Sum_probs=128.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||+|.+..... ......+.+.+|+.++..++||||+++++++.+.+ ..++||||+
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 123 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh-ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEEEcCC
Confidence 78999999999999987 689999999854321 11223457889999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 124 ~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 124 AGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp TTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999997543 489999999999999999999999 999999999999999999999999999987654
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-26 Score=227.12 Aligned_cols=145 Identities=16% Similarity=0.119 Sum_probs=118.8
Q ss_pred hhhCcCCCeeEEEEEe----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+++. .+++.||+|++..............+.+|+.++++++||||+++++++...+ ..++||
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 100 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--KLYLIL 100 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS--CEEEEE
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--EEEEEE
Confidence 7899999999999998 4688999999854322112223456889999999999999999999998877 799999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 101 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 101 EYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp ECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred eCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 9999999999997433 489999999999999999999999 9999999999999999999999999998754
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=223.00 Aligned_cols=144 Identities=17% Similarity=0.226 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|+..+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++||||++
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~ 102 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLVFEFME 102 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEEEECCS
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccc--cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEEEcCCC
Confidence 78999999999999998899999999854322 2234567899999999999999999999998876 7999999998
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 103 ~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 103 K-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp E-EHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred C-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 5 8888886433 3589999999999999999999999 99999999999999999999999999998764
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.6e-26 Score=227.25 Aligned_cols=144 Identities=17% Similarity=0.120 Sum_probs=127.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.+ +++.||+|++..... ......+.+.+|..++.++ +||||+++++++.+.+ ..++||||
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv~e~ 91 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIEY 91 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEEEEeC
Confidence 78999999999999997 688999999854322 1233456788999999988 8999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 92 VNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 99999999997433 489999999999999999999999 9999999999999999999999999999863
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-26 Score=240.32 Aligned_cols=148 Identities=19% Similarity=0.144 Sum_probs=130.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+|+.. +|+.||+|++...... .......+.+|+.++.+++|||||++++++.+.+ ..++||||+
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmEy~ 266 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTLM 266 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEEEEcC
Confidence 78999999999999996 7899999998543211 1223456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+.+
T Consensus 267 ~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 267 NGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp CSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999765545699999999999999999999999 999999999999999999999999999987643
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.3e-26 Score=219.24 Aligned_cols=143 Identities=21% Similarity=0.325 Sum_probs=127.8
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+.+++..||+|++..... ..+++.+|+.++.+++||||+++++++.+.+ ..++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 86 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIVTEYIS 86 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTB-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEECCT
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCC-----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEEEEccC
Confidence 78999999999999999888999999853322 2356899999999999999999999998776 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...+
T Consensus 87 ~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 87 NGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp TCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred CCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 999999997432 3589999999999999999999999 999999999999999999999999999986543
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.9e-26 Score=224.60 Aligned_cols=143 Identities=12% Similarity=0.165 Sum_probs=127.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.+|+|.+.... .....+.+|+.++..++||||+++++++.+.+ ..++||||+
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~ 83 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIFEFI 83 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCc-----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEEEEEeC
Confidence 78999999999999987 57889999885332 23456899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--CCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~--~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.+.+
T Consensus 84 ~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 84 SGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 9999999996432 3589999999999999999999999 9999999999999987 78999999999987643
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-26 Score=232.48 Aligned_cols=147 Identities=18% Similarity=0.169 Sum_probs=126.5
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. ++||+|+||+||+|+.+ +++.||+|++...... .....+.+.+|..++.++ +|||||++++++.+.+ ..
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~ 128 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RL 128 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EE
Confidence 3444 78999999999999987 5788999998543221 122234578899999887 8999999999999877 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
++||||+++|+|.+++.... .+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 129 ~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99999999999999997433 489999999999999999999999 999999999999999999999999999986
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=224.86 Aligned_cols=145 Identities=21% Similarity=0.299 Sum_probs=124.4
Q ss_pred hhhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||+|++ .+++.||+|++... .....+.+.+|++++.+++||||+++++++...+....++|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 91 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 91 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEE
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEE
Confidence 7899999999999985 25789999998432 22345679999999999999999999999865432258999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 92 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 92 MEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 99999999999997443 3589999999999999999999999 99999999999999999999999999998764
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=223.24 Aligned_cols=146 Identities=20% Similarity=0.240 Sum_probs=128.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc--chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|+.. +|+.||+|.+....... .....+.+.+|+.++.+++||||+++++++.+.. ..++|||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 94 (326)
T 2y0a_A 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILILE 94 (326)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEE
Confidence 78999999999999997 68999999986543211 1123567999999999999999999999998877 8999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~----~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++ .+||+|||+++.+.
T Consensus 95 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 95 LVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp CCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred cCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 99999999999643 3589999999999999999999999 999999999999999887 89999999998764
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.2e-26 Score=222.18 Aligned_cols=147 Identities=18% Similarity=0.176 Sum_probs=122.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc----------------------chhhHHHHHHHHHHHhccCCCcc
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----------------------TGYLELYFQREVADLARINHENT 420 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----------------------~~~~~~~~~~E~~~l~~l~H~ni 420 (521)
+.||+|+||.||+|+.. +++.||+|.+....... .....+.+.+|++++++++||||
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 98 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV 98 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTB
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 78999999999999986 68899999985443110 01123468999999999999999
Q ss_pred ceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 009972 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 421 v~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~ 500 (521)
+++++++.+.+....++||||+++|+|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+|||+++
T Consensus 99 v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~ 172 (298)
T 2zv2_A 99 VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGE 172 (298)
T ss_dssp CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECT
T ss_pred CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECC
Confidence 999999987443478999999999999987642 3589999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhcc
Q 009972 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+++.+.
T Consensus 173 ~~~~kl~Dfg~~~~~~ 188 (298)
T 2zv2_A 173 DGHIKIADFGVSNEFK 188 (298)
T ss_dssp TSCEEECCCTTCEECS
T ss_pred CCCEEEecCCCccccc
Confidence 9999999999998764
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-25 Score=225.85 Aligned_cols=149 Identities=20% Similarity=0.244 Sum_probs=129.3
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||.||+|+.+ +++.||+|.+..+.. .....+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~ 104 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHY 104 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEE
Confidence 4454 78999999999999986 689999999854332 2334567899999999999999999999999877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeeeCCCchhh
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKVSPLCLSF 513 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~---~~~kl~DfGla~ 513 (521)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 105 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EEECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999999999643 3589999999999999999999999 99999999999999865 459999999998
Q ss_pred hccc
Q 009972 514 LLVS 517 (521)
Q Consensus 514 ~~~~ 517 (521)
.+.+
T Consensus 180 ~~~~ 183 (362)
T 2bdw_A 180 EVND 183 (362)
T ss_dssp CCTT
T ss_pred EecC
Confidence 7653
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=222.81 Aligned_cols=148 Identities=17% Similarity=0.220 Sum_probs=128.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||+||+|+.. +++.||+|++..... ....+.+.+|++++++++||||+++++++........++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 91 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCC
Confidence 78999999999999997 589999999853321 12345688999999999999999999999876544679999999
Q ss_pred CCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl----d~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ...+++.++..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 9999999997533 23489999999999999999999999 99999999999999 7888999999999987643
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=228.58 Aligned_cols=145 Identities=15% Similarity=0.152 Sum_probs=130.1
Q ss_pred hhhCcC--CCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+| +||.||+|+.. +++.||||++..... .....+.+.+|+.+++.++|||||++++++.+.+ ..++|||
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 106 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVVTS 106 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EEEEEEE
Confidence 789999 99999999997 689999999854432 2344567889999999999999999999999877 8999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|+++|+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+..+
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 107 FMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp CCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred ccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999765445699999999999999999999999 9999999999999999999999999987654
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.3e-26 Score=227.58 Aligned_cols=148 Identities=18% Similarity=0.199 Sum_probs=128.2
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. +.||+|+||.||+|+.+ +++.||+|.+..... ......+.+.+|..++..+ +||||+++++++.+.+ ..
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~~ 93 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NL 93 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh-hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--EE
Confidence 4554 88999999999999997 688999999854321 1112345678899999887 9999999999999877 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99999999999999997433 489999999999999999999999 9999999999999999999999999999864
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.9e-26 Score=226.31 Aligned_cols=145 Identities=26% Similarity=0.351 Sum_probs=127.4
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+..+ ++.||+|.+.... .....+.|.+|+.++.+++||||+++++++...+ ..++
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 127 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--PMCL 127 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEE
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--ceEE
Confidence 789999999999999853 4789999984321 2334567999999999999999999999998876 7899
Q ss_pred EEeeCCCCChhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 009972 438 VFDYASNGTLYEHLHYGE----------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~N 495 (521)
||||+++|+|.+++.... ...+++.++..|+.|+++||+|||+. +|+||||||+|
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~N 204 (343)
T 1luf_A 128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRN 204 (343)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred EEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcce
Confidence 999999999999997432 14689999999999999999999999 99999999999
Q ss_pred eeecCCCCeeeCCCchhhhcc
Q 009972 496 VYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 496 ILld~~~~~kl~DfGla~~~~ 516 (521)
||+++++.+||+|||+++.+.
T Consensus 205 Il~~~~~~~kl~Dfg~~~~~~ 225 (343)
T 1luf_A 205 CLVGENMVVKIADFGLSRNIY 225 (343)
T ss_dssp EEECGGGCEEECCCSCHHHHT
T ss_pred EEECCCCeEEEeecCCCcccc
Confidence 999999999999999998754
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.5e-26 Score=229.22 Aligned_cols=160 Identities=18% Similarity=0.218 Sum_probs=132.8
Q ss_pred cCHHHHHHHHhhhh--hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCcc
Q 009972 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENT 420 (521)
Q Consensus 350 ~~~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~ni 420 (521)
+...+++...++|. +.||+|+||.||+|++. +++.||||++.... .....+.+.+|++++.++ +||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpni 88 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNV 88 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCcce
Confidence 44455555556665 88999999999999842 45789999984321 223456799999999999 89999
Q ss_pred ceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCC--------------------------------------------
Q 009972 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER-------------------------------------------- 456 (521)
Q Consensus 421 v~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~-------------------------------------------- 456 (521)
++++++|...+. ..++||||+++|+|.++++....
T Consensus 89 v~~~~~~~~~~~-~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 3vhe_A 89 VNLLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167 (359)
T ss_dssp CCEEEEECSTTS-CCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred eeeeeeeecCCC-ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence 999999987542 48999999999999999975321
Q ss_pred --------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 457 --------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 457 --------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
..+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 1289999999999999999999999 99999999999999999999999999998653
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=219.92 Aligned_cols=144 Identities=19% Similarity=0.251 Sum_probs=127.2
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..+++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+ ..++||||++
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~ 83 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEHLD 83 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEECCS
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEecccc--ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEEEEecC
Confidence 78999999999999998899999999854332 1223457889999999999999999999998876 7999999998
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 151 (288)
T 1ob3_A 84 Q-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151 (288)
T ss_dssp E-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred C-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccC
Confidence 6 9999987432 3589999999999999999999999 99999999999999999999999999998754
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=230.99 Aligned_cols=145 Identities=14% Similarity=0.092 Sum_probs=118.3
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccc----cchhhHHHHHHHHHHHhccC---------CCccceeeeE----
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----WTGYLELYFQREVADLARIN---------HENTGKLLGY---- 426 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~---------H~niv~l~g~---- 426 (521)
+.||+|+||+||+|+. +|+.||||++...... ......+.+.+|+.++++++ |||||++.+.
T Consensus 26 ~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~ 104 (336)
T 2vuw_A 26 EKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQ 104 (336)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEE
T ss_pred eeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEec
Confidence 7899999999999998 6789999999655321 11223467889999998886 6666655554
Q ss_pred -------------eec-------------CCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-
Q 009972 427 -------------CRE-------------SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH- 479 (521)
Q Consensus 427 -------------~~~-------------~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH- 479 (521)
+.+ .. ..++||||+++|++.+.+.. ..+++..+..|+.||+.||+|||
T Consensus 105 ~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~--~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~ 179 (336)
T 2vuw_A 105 GSYPPLLLKAWDHYNSTKGSANDRPDFFKDD--QLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVAEA 179 (336)
T ss_dssp SSCCHHHHHHHHHHHHHTCCSSCCSCCCCTT--CEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhhhccccccCccccccC--eEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 332 33 79999999999987777643 34899999999999999999999
Q ss_pred cCCCCCeeecCCCCCCeeecCCC--------------------CeeeCCCchhhhccc
Q 009972 480 TELGPPFTISELNSSAVYLTEDF--------------------SPKVSPLCLSFLLVS 517 (521)
Q Consensus 480 ~~~~~~ivH~dlk~~NILld~~~--------------------~~kl~DfGla~~~~~ 517 (521)
+. +|+||||||+|||++.++ .+||+|||+|+.+.+
T Consensus 180 ~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~ 234 (336)
T 2vuw_A 180 SL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD 234 (336)
T ss_dssp HH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET
T ss_pred hC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC
Confidence 88 999999999999999887 899999999997654
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=218.91 Aligned_cols=144 Identities=15% Similarity=0.210 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|++..... .....+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 83 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEFC 83 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEEEEecC
Confidence 78999999999999996 688999999854432 2334567899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++ ++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 152 (292)
T 3o0g_A 84 DQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152 (292)
T ss_dssp SE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecC
Confidence 86 6666665322 3589999999999999999999999 99999999999999999999999999998764
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-26 Score=237.43 Aligned_cols=143 Identities=20% Similarity=0.291 Sum_probs=124.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+++++..||||.+..... ..++|.+|+.++++++||||+++++++.+ + ..++||||++
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~e~~~ 261 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTEYMS 261 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEECCCT
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEehhhc
Confidence 78999999999999998888899999853221 24579999999999999999999999976 3 5899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.+
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999743334589999999999999999999999 999999999999999999999999999987653
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=233.34 Aligned_cols=142 Identities=23% Similarity=0.311 Sum_probs=125.8
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|++. ++.||||.+.... ..+.|.+|+.++++++||||+++++++..... ..++||||++
T Consensus 199 ~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~e~~~ 270 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMA 270 (450)
T ss_dssp EEEEECSSEEEEEEEET-TEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEEECCT
T ss_pred eeecCcCCeeEEEEEec-CCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEEEecC
Confidence 78999999999999986 6789999984321 24579999999999999999999999876542 5899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++......+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 271 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 271 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999865544589999999999999999999999 99999999999999999999999999998543
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=227.74 Aligned_cols=144 Identities=15% Similarity=0.190 Sum_probs=122.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++.+++||||+++++++.+.+ ..++||||+
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E~~ 168 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVMEYV 168 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeCC
Confidence 67999999999999986 68999999985432 123567999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee--cCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL--TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl--d~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.+.+
T Consensus 169 ~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 169 DGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp TTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 9999999986432 3589999999999999999999999 99999999999999 5678999999999987653
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=225.66 Aligned_cols=149 Identities=17% Similarity=0.201 Sum_probs=127.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecc-ccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.+ +++.||+|.+..... .......+.+.+|+.++..++||||+++++++.+.+ ..++||||
T Consensus 30 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~ 107 (351)
T 3c0i_A 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLYMVFEF 107 (351)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEeC
Confidence 78999999999999986 689999999854321 111123567999999999999999999999998877 89999999
Q ss_pred CCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~---~kl~DfGla~~~~ 516 (521)
+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.+.
T Consensus 108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~ 184 (351)
T 3c0i_A 108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184 (351)
T ss_dssp CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTCEECC
T ss_pred CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcceeEec
Confidence 9999999888632 233589999999999999999999999 9999999999999986654 9999999998765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 185 ~ 185 (351)
T 3c0i_A 185 E 185 (351)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-25 Score=219.64 Aligned_cols=144 Identities=17% Similarity=0.220 Sum_probs=118.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 85 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE---EGTPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTLVFEFM 85 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCST---TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEEEEECC
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccc---cccHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEEEEEec
Confidence 78999999999999986 689999999854432 123356889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 8 5999988632 223589999999999999999999999 99999999999999999999999999998754
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-25 Score=230.22 Aligned_cols=149 Identities=19% Similarity=0.224 Sum_probs=128.2
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||.||+|... +|+.+|+|.+..+.. .....+.+.+|+.+++.++||||+++++++.+.+ ..+
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~ 86 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHY 86 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC--HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEE
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEE
Confidence 4444 78999999999999986 788999999865432 2334567899999999999999999999999877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeeeCCCchhh
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSF 513 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld---~~~~~kl~DfGla~ 513 (521)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+|+
T Consensus 87 lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 9999999999999997543 489999999999999999999999 999999999999998 46789999999998
Q ss_pred hccc
Q 009972 514 LLVS 517 (521)
Q Consensus 514 ~~~~ 517 (521)
.+.+
T Consensus 162 ~~~~ 165 (444)
T 3soa_A 162 EVEG 165 (444)
T ss_dssp CCCT
T ss_pred EecC
Confidence 7653
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=224.06 Aligned_cols=144 Identities=22% Similarity=0.368 Sum_probs=123.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC--CCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--PFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++.+++||||+++++++.... ....++||||
T Consensus 30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~ 103 (322)
T 3soc_A 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103 (322)
T ss_dssp EEEECSTTCEEEEEEET-TEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred heecccCceEEEEEEEC-CCEEEEEEeecCc-----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence 78999999999999886 6889999984322 22345677999999999999999999998654 1146999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------CCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+++|+|.++++.. .++|..+..|+.|++.||+|||+.+ .++|+||||||+|||+++++.+||+|||+|+.
T Consensus 104 ~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~ 180 (322)
T 3soc_A 104 HEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180 (322)
T ss_dssp CTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccc
Confidence 9999999999743 3899999999999999999999862 34899999999999999999999999999976
Q ss_pred cc
Q 009972 515 LV 516 (521)
Q Consensus 515 ~~ 516 (521)
+.
T Consensus 181 ~~ 182 (322)
T 3soc_A 181 FE 182 (322)
T ss_dssp EC
T ss_pred cc
Confidence 54
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=224.53 Aligned_cols=145 Identities=16% Similarity=0.250 Sum_probs=126.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++..... ........+.+|+.+++.++||||+++++++.+.+ ..++||||+
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~E~~ 91 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLL-KKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVMVIEYA 91 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHc-cchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEECC
Confidence 78999999999999985 789999999853321 11223457899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.+
T Consensus 92 -~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 92 -GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp -CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred -CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 679999986443 489999999999999999999999 999999999999999999999999999987654
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-25 Score=223.32 Aligned_cols=144 Identities=22% Similarity=0.301 Sum_probs=120.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCE----EEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||+|++. +++. ||+|.+.... .....++|.+|+.++++++||||++++++|... ..++|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~v 94 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLI 94 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS---SEEEE
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC---CeEEE
Confidence 78999999999999975 4544 4666653221 223456799999999999999999999999875 47899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+||+++|+|.+++.... ..+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 95 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 99999999999997543 3589999999999999999999999 999999999999999999999999999987653
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=218.53 Aligned_cols=144 Identities=24% Similarity=0.332 Sum_probs=129.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 91 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFM 91 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEECC
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEEEEEcC
Confidence 78999999999999997 47889999984322 23467899999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.......+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999865556799999999999999999999999 999999999999999999999999999987653
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=227.30 Aligned_cols=145 Identities=24% Similarity=0.252 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeC--------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCc
Q 009972 364 NIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||.||+|+.. .+..||+|++... ......+++.+|++++.++ +||||+++++++...+ .
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~ 149 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--P 149 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccc---cCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC--c
Confidence 78999999999999873 2357999988432 1233456799999999999 9999999999998877 7
Q ss_pred eEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 009972 435 RMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 435 ~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~ 500 (521)
.++||||+++|+|.+++.... ...+++.++..|+.|++.||+|||+. +|+||||||+|||+++
T Consensus 150 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 226 (382)
T 3tt0_A 150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTE 226 (382)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECT
T ss_pred eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcC
Confidence 899999999999999997533 13589999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhcc
Q 009972 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+|+.+.
T Consensus 227 ~~~~kL~DFG~a~~~~ 242 (382)
T 3tt0_A 227 DNVMKIADFGLARDIH 242 (382)
T ss_dssp TCCEEECSCSCCCCSS
T ss_pred CCcEEEcccCcccccc
Confidence 9999999999998664
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-25 Score=227.20 Aligned_cols=144 Identities=20% Similarity=0.268 Sum_probs=124.2
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||+||+|++. ++..||||++... .......++.+|+.++.+++||||+++++++.... ..++
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~l 151 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV---CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--PRFI 151 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSS---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEE
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc---cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--CCEE
Confidence 78999999999999953 4568999998422 12334567899999999999999999999998876 7899
Q ss_pred EEeeCCCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeeeCCC
Q 009972 438 VFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKVSPL 509 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~---~~kl~Df 509 (521)
||||+++|+|.+++.... ...+++.+++.|+.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DF 228 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 228 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCC
Confidence 999999999999997422 23589999999999999999999999 999999999999999554 5999999
Q ss_pred chhhhc
Q 009972 510 CLSFLL 515 (521)
Q Consensus 510 Gla~~~ 515 (521)
|+|+.+
T Consensus 229 G~a~~~ 234 (367)
T 3l9p_A 229 GMARDI 234 (367)
T ss_dssp HHHHHH
T ss_pred cccccc
Confidence 999865
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.2e-26 Score=240.32 Aligned_cols=142 Identities=20% Similarity=0.292 Sum_probs=126.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+++++..||||++..... ..++|.+|++++++++||||+++++++.+ + ..++||||++
T Consensus 273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~e~~~ 344 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTEYMS 344 (535)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEECCCT
T ss_pred eecccCCCeEEEEEEECCCceEEEEEeCCCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEeeehhc
Confidence 78999999999999998888899999853221 24579999999999999999999999976 3 5899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++......+++.++..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 99999999743334589999999999999999999999 99999999999999999999999999998764
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=226.65 Aligned_cols=141 Identities=13% Similarity=0.077 Sum_probs=121.7
Q ss_pred hhhCcCCCeeEEEEE------eCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC---CCccceeeeEeecCCCCc
Q 009972 364 NIIGSSPDSLVYKGT------MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~------~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||+||+|. ..+++.||+|++... ...++.+|++++..++ |+||+++++++...+ .
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~--~ 141 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN--G 141 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS--C
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC--C
Confidence 789999999999994 346889999998432 1345778888888776 999999999998877 7
Q ss_pred eEEEEeeCCCCChhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-----------
Q 009972 435 RMLVFDYASNGTLYEHLHYG---ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----------- 500 (521)
Q Consensus 435 ~~lv~ey~~~g~L~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~----------- 500 (521)
.++||||+++|+|.++++.. ....++|..+..|+.|++.||+|||+. +|+||||||+|||++.
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccc
Confidence 89999999999999999631 234699999999999999999999998 9999999999999998
Q ss_pred CCCeeeCCCchhhhcc
Q 009972 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+|+.+.
T Consensus 219 ~~~~kl~DFG~a~~~~ 234 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMK 234 (365)
T ss_dssp CTTEEECCCTTCEEGG
T ss_pred cCCEEEeeCchhhhhh
Confidence 8999999999997653
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-25 Score=217.79 Aligned_cols=143 Identities=17% Similarity=0.318 Sum_probs=126.3
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+.+++..||+|.+.... ...+.+.+|++++.+++||||+++++++... ..++||||++
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~e~~~ 90 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITEYME 90 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEECCT
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCc-----ccHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEEEecCC
Confidence 7899999999999999888899999884322 1245789999999999999999999998754 5799999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.+
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 99999999643323589999999999999999999999 999999999999999999999999999987643
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.9e-26 Score=223.79 Aligned_cols=147 Identities=17% Similarity=0.226 Sum_probs=124.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCC--ceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF--TRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~--~~~lv~e 440 (521)
+.||+|+||.||+|+.. +++.||+|++..... ........+.+|+.++.+++||||+++++++...... ..++|||
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 78999999999999985 788999999854322 2233456789999999999999999999998765411 2499999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+++|+|.++++... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 97 ~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 97 YVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp CCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 999999999997443 489999999999999999999999 99999999999999999999999999998654
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=220.68 Aligned_cols=148 Identities=16% Similarity=0.088 Sum_probs=124.6
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. ++||+|+||+||+|+.. +++.||||++..... .......+..|+..+.++ +||||++++++|.+.+ ..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~--~~ 132 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG--IL 132 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC--EE
Confidence 3454 78999999999999997 789999998743322 123344566677666665 9999999999998877 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++||||+ +|+|.+++.... ..++|..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 133 YLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEEEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEEEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 9999999 569999886433 3599999999999999999999999 9999999999999999999999999998766
Q ss_pred c
Q 009972 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 208 ~ 208 (311)
T 3p1a_A 208 G 208 (311)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-25 Score=232.00 Aligned_cols=146 Identities=20% Similarity=0.278 Sum_probs=129.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||||++..... ........+.+|+.+++.++||||+++++++.+.+ ..++||||+
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~lv~E~~ 98 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFMVMEYV 98 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH-HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeCC
Confidence 78999999999999997 789999999854321 11223457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.+
T Consensus 99 ~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 99 SGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp SSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 999999999643 3589999999999999999999999 999999999999999999999999999987654
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=234.49 Aligned_cols=148 Identities=20% Similarity=0.148 Sum_probs=129.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||+||+|+.+ +|+.||+|++...... .....+.+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmE~~ 267 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLVMTIM 267 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEEEEec
Confidence 67999999999999996 6899999998543211 1223457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.+
T Consensus 268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999997433 34699999999999999999999999 999999999999999999999999999987643
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=225.87 Aligned_cols=148 Identities=18% Similarity=0.100 Sum_probs=128.3
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. +.||+|+||+||+|+.+ +++.||+|.+..... ......+.+.+|..++..+ +||||+++++++.+.+ ..
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~ 96 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RL 96 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EE
Confidence 4454 78999999999999997 478899999854321 1122345688999999988 8999999999998877 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++||||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 99999999999999997433 489999999999999999999999 9999999999999999999999999999863
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-25 Score=220.95 Aligned_cols=139 Identities=19% Similarity=0.241 Sum_probs=123.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||||++... ....+.+|+.++..++ ||||+++++++.+.. ..++||||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e~ 87 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVMEL 87 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEEc
Confidence 67999999999999996 6899999998422 2356789999999997 999999999999877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~---~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++...
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 160 (325)
T 3kn6_A 88 LNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160 (325)
T ss_dssp CCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence 99999999997543 589999999999999999999999 999999999999998765 89999999998654
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=226.38 Aligned_cols=144 Identities=21% Similarity=0.132 Sum_probs=117.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHH-HhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.+ +++.||+|++...... .......+.+|..+ ++.++||||+++++++.+.+ ..++||||
T Consensus 44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~lv~E~ 120 (373)
T 2r5t_A 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVLDY 120 (373)
T ss_dssp EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEEEEeC
Confidence 78999999999999997 5789999998544321 12234456777776 57789999999999999877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 121 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 121 INGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 99999999997433 488999999999999999999999 9999999999999999999999999999864
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-25 Score=222.17 Aligned_cols=146 Identities=22% Similarity=0.301 Sum_probs=124.6
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+.. ++..||+|.+.... .....+.+.+|+.++.++ +||||+++++++...+ ..+
T Consensus 51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 125 (344)
T 1rjb_A 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG--PIY 125 (344)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCE
T ss_pred eeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC--ccE
Confidence 78999999999999972 35679999985332 122346799999999999 9999999999998876 789
Q ss_pred EEEeeCCCCChhhhhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 009972 437 LVFDYASNGTLYEHLHYGER---------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~N 495 (521)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|
T Consensus 126 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~N 202 (344)
T 1rjb_A 126 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARN 202 (344)
T ss_dssp EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGG
T ss_pred EEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhh
Confidence 99999999999999975432 2489999999999999999999999 99999999999
Q ss_pred eeecCCCCeeeCCCchhhhccc
Q 009972 496 VYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 496 ILld~~~~~kl~DfGla~~~~~ 517 (521)
||++.++.+||+|||+++.+..
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~ 224 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMS 224 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGG
T ss_pred EEEcCCCcEEeCCCccCccccc
Confidence 9999999999999999986643
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=220.29 Aligned_cols=145 Identities=22% Similarity=0.273 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+.. ++..||+|.+.... .....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 103 (314)
T 2ivs_A 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLL 103 (314)
T ss_dssp EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCEE
T ss_pred eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--ceEE
Confidence 78999999999999872 35789999884321 2334567999999999999999999999998876 7899
Q ss_pred EEeeCCCCChhhhhhcCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 009972 438 VFDYASNGTLYEHLHYGER----------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~N 495 (521)
||||+++|+|.+++..... ..+++.++..++.|+++||+|||+. +|+||||||+|
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~N 180 (314)
T 2ivs_A 104 IVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARN 180 (314)
T ss_dssp EEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred EEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchhe
Confidence 9999999999999974321 3489999999999999999999999 99999999999
Q ss_pred eeecCCCCeeeCCCchhhhcc
Q 009972 496 VYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 496 ILld~~~~~kl~DfGla~~~~ 516 (521)
|++++++.+||+|||+++.+.
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~ 201 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVY 201 (314)
T ss_dssp EEEETTTEEEECCCTTCEECT
T ss_pred EEEcCCCCEEEcccccccccc
Confidence 999999999999999998653
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-25 Score=224.03 Aligned_cols=144 Identities=15% Similarity=0.193 Sum_probs=126.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.++..++||||+++++++.+.. ..++||||+
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~E~~ 130 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLILEFL 130 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEEEEEEcC
Confidence 78999999999999987 68899999885332 123457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--CCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~--~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.+..
T Consensus 131 ~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 131 SGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 999999999643 23589999999999999999999999 9999999999999974 57899999999987653
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-25 Score=213.71 Aligned_cols=142 Identities=20% Similarity=0.267 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..+++.||+|.+..... ..+.+.+|++++.+++||||+++++++.+.+ ..++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 86 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVTEFME 86 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEECCCT
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEEeCCC
Confidence 78999999999999998888999999853321 2357899999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++.... ..+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 87 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 155 (267)
T 3t9t_A 87 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 155 (267)
T ss_dssp TCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccc
Confidence 999999997443 3589999999999999999999999 99999999999999999999999999998753
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-25 Score=223.03 Aligned_cols=146 Identities=18% Similarity=0.216 Sum_probs=126.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||++..... ......+.+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 136 (348)
T 1u5q_A 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYC 136 (348)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEEEEecC
Confidence 78999999999999985 788999999854322 22334467999999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+ |+|.+++.... ..+++.++..++.++++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.+
T Consensus 137 ~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 137 L-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp S-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred C-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 8 68888885322 3589999999999999999999999 999999999999999999999999999987643
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=234.47 Aligned_cols=148 Identities=20% Similarity=0.131 Sum_probs=120.3
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||.||+|+.. +|+.||+|.+..... ........+.+|+.+++.++||||+++++++...+ ..+
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~ 224 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLC 224 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-C-------------CCCCCSCTTSCCEEEEEEETT--EEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhh-hhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEE
Confidence 3454 78999999999999986 689999999854321 11223456789999999999999999999999877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+|+..
T Consensus 225 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 225 FVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999999996433 58999999999999999999998 7 9999999999999999999999999999864
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-25 Score=231.13 Aligned_cols=145 Identities=19% Similarity=0.179 Sum_probs=116.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC---CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|+||+||+|+.. +++.||||++..... .....+++.+|++++.+++|||||++++++.... ....++||
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE--DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhhc--CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEE
Confidence 78999999999999987 789999999843221 2334567999999999999999999999985432 12689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||++ |+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 137 e~~~-~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 137 EIAD-SDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CCCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred eccc-cchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 9985 69999997443 589999999999999999999999 99999999999999999999999999998764
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-25 Score=217.77 Aligned_cols=144 Identities=20% Similarity=0.245 Sum_probs=127.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||+|++.... ......+.+.+|++++.+++||||+++++++...+ ..++||||+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHLVFEYC 84 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCC--C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccc--cchHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEEEEEeC
Confidence 78999999999999997 58999999885432 22344567899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 85 ~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 85 DHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp SEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 9999999886433 489999999999999999999999 99999999999999999999999999998754
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-25 Score=223.51 Aligned_cols=140 Identities=19% Similarity=0.183 Sum_probs=123.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+++.. +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.. ..++||||+
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 98 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-----IDENVQREIINHRSLRHPNIVRFKEVILTPT--HLAIIMEYA 98 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-----SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-----ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEEEEEeC
Confidence 78999999999999997 789999999853321 2346889999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--eeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~--~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 99 ~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 99 SGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 9999999996433 489999999999999999999999 9999999999999987765 999999998843
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-25 Score=217.81 Aligned_cols=139 Identities=22% Similarity=0.312 Sum_probs=118.2
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhc--cCCCccceeeeEeecCC--CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESS--PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~--~~~~~lv~ 439 (521)
+.||+|+||+||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++.... ....++||
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 7899999999999988 6788999997432 23345666666665 79999999999875431 12579999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeecCCCCeeeCCCch
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH--------TELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~dlk~~NILld~~~~~kl~DfGl 511 (521)
||+++|+|.++++.. .+++..+.+|+.|++.||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 86 e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 86 HYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp CCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred hhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999999532 4899999999999999999999 66 999999999999999999999999999
Q ss_pred hhhcc
Q 009972 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
|+...
T Consensus 160 a~~~~ 164 (301)
T 3q4u_A 160 AVMHS 164 (301)
T ss_dssp CEEEE
T ss_pred eeecc
Confidence 97654
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-25 Score=226.40 Aligned_cols=148 Identities=17% Similarity=0.220 Sum_probs=127.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+|+.. +++.||+|++..... ....+.+.+|++++++++||||+++++++........++||||+
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~ 91 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCC
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecC
Confidence 78999999999999997 589999999853321 12345688999999999999999999999876544679999999
Q ss_pred CCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl----d~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ...+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 92 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp TTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred CCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 9999999997432 23489999999999999999999999 99999999999999 7788899999999987643
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-25 Score=214.14 Aligned_cols=148 Identities=26% Similarity=0.468 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+++ ++.||+|.+.... ......+.|.+|+.++.+++||||+++++++.+......++||||++
T Consensus 16 ~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRD--WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEECCTT--CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHhcCCCcceEEEEEEC-CeeEEEEEecccc--cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 78999999999999985 7889999985432 22344567999999999999999999999998764347899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+|+|.++++......+++.++..|+.|++.||+|||+. .++|+||||||+||++++++.++|+|||++...
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp TCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 99999999865555699999999999999999999997 223999999999999999999999988876543
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-25 Score=218.78 Aligned_cols=146 Identities=18% Similarity=0.247 Sum_probs=127.5
Q ss_pred hhhCcCCCeeEEEEEe------CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+. .+++.||+|.+.... .....+.+.+|+.++.++ +||||+++++++...+ ..+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~ 103 (313)
T 1t46_A 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG--PTL 103 (313)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCE
T ss_pred HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC--CcE
Confidence 7899999999999985 246789999985322 123456799999999999 9999999999998877 789
Q ss_pred EEEeeCCCCChhhhhhcCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 009972 437 LVFDYASNGTLYEHLHYGER----------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~ 500 (521)
+||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||++++
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 180 (313)
T 1t46_A 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTH 180 (313)
T ss_dssp EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEET
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcC
Confidence 99999999999999974432 2489999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhccc
Q 009972 501 DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~~ 517 (521)
++.+||+|||+++.+..
T Consensus 181 ~~~~kl~Dfg~~~~~~~ 197 (313)
T 1t46_A 181 GRITKICDFGLARDIKN 197 (313)
T ss_dssp TTEEEECCCGGGSCTTS
T ss_pred CCCEEEccccccccccc
Confidence 99999999999987643
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=226.59 Aligned_cols=145 Identities=17% Similarity=0.121 Sum_probs=125.8
Q ss_pred hhhCcCCCeeEEEEEe----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|+. .+++.||||++............+.+.+|+.++.++ +||||+++++++...+ ..++|
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~lv 137 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--KLHLI 137 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--EEEEE
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--eEEEE
Confidence 7899999999999998 368899999985433211122234577899999999 6999999999998877 89999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 138 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 138 LDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp ECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999997443 489999999999999999999999 9999999999999999999999999999865
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-25 Score=239.90 Aligned_cols=144 Identities=24% Similarity=0.287 Sum_probs=125.8
Q ss_pred hhhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|.+. +++.||||++.... ......++|.+|++++.+++|||||+++++|... ..++|||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~E 449 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVME 449 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG--GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEEE
Confidence 47999999999999764 45789999885432 2233457899999999999999999999999754 5789999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+++|+|.++++... .+++.++..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 450 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~ 521 (635)
T 4fl3_A 450 MAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521 (635)
T ss_dssp CCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred ccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence 999999999997443 489999999999999999999999 999999999999999999999999999997643
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=225.18 Aligned_cols=145 Identities=25% Similarity=0.320 Sum_probs=118.4
Q ss_pred hhhCcCCCeeEEEEEeCC--C--CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG--G--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~--~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+..+ + ..||+|.+... ......++|.+|+.++++++||||++++++|...+. ..++||
T Consensus 95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~lv~ 170 (373)
T 3c1x_A 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVL 170 (373)
T ss_dssp EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC---SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CCEEEE
T ss_pred cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-CeEEEE
Confidence 789999999999998752 2 35788887432 122345679999999999999999999999865432 679999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.++++... ..+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 171 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp ECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred ECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999997433 3589999999999999999999999 99999999999999999999999999998653
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-25 Score=217.94 Aligned_cols=147 Identities=21% Similarity=0.326 Sum_probs=124.6
Q ss_pred hhhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|++ .+++.||+|++..... ....+.+.+|+.++.+++||||+++++++........++|
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 103 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 103 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEE
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEE
Confidence 7899999999999984 3678999999854321 2234678999999999999999999999987643368999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 104 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 104 MEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 99999999999996332 3589999999999999999999999 999999999999999999999999999987643
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.5e-25 Score=213.28 Aligned_cols=146 Identities=23% Similarity=0.285 Sum_probs=128.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 93 (278)
T 3cok_A 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM-YKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLVLEMC 93 (278)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eeecCCCceEEEEEEEccCCceEEEEEeehhhh-hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEEEecC
Confidence 78999999999999985 789999999854321 11223467899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 94 ~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 94 HNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp TTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999743 24689999999999999999999999 99999999999999999999999999998654
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-25 Score=222.17 Aligned_cols=141 Identities=21% Similarity=0.245 Sum_probs=115.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+.... ..+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 130 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EISLVLELV 130 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEEEEEEeC
Confidence 78999999999999997 57899999985322 2346889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 131 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 131 TGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 999999999644 3589999999999999999999999 9999999999999975 89999999999987643
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=215.61 Aligned_cols=153 Identities=23% Similarity=0.274 Sum_probs=126.4
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccC---CCccceeeeEeecCCC
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARIN---HENTGKLLGYCRESSP 432 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~ 432 (521)
++|. +.||+|+||+||+|+.. +++.||+|++...... ........+.+|+.++++++ ||||++++++|.....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 4454 78999999999999985 7899999998654321 11122345778888877765 9999999999976542
Q ss_pred C---ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCC
Q 009972 433 F---TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 433 ~---~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~Df 509 (521)
. ..++||||++ |+|.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeC
Confidence 1 3789999998 5999999866555699999999999999999999999 9999999999999999999999999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 165 g~a~~~~ 171 (308)
T 3g33_A 165 GLARIYS 171 (308)
T ss_dssp SCTTTST
T ss_pred ccccccC
Confidence 9998765
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=222.62 Aligned_cols=157 Identities=15% Similarity=0.137 Sum_probs=128.8
Q ss_pred HHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeec-cccchhhHHHHHHHHHHHhccCCCccceeeeEeecC
Q 009972 355 LEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 355 l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~-~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
+....++|. +.||+|+||.||+|+.. ++..||+|.+.... ........+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 344445665 89999999999999986 68899999985432 111233456899999999999999999999999887
Q ss_pred CCCceEEEEeeCCCCChhhhhhcC--------------------------------------CCCCCCHHHHHHHHHHHH
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYG--------------------------------------ERCQVSWTRRMKIVIGIA 472 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~ia 472 (521)
+ ..++||||+++|+|.+++... ....+++..+..|+.|++
T Consensus 101 ~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 101 Q--YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp S--EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred C--eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 7 899999999999999998510 011246777889999999
Q ss_pred HHHHHHhcCCCCCeeecCCCCCCeeecCCC--CeeeCCCchhhhcc
Q 009972 473 RGLKYLHTELGPPFTISELNSSAVYLTEDF--SPKVSPLCLSFLLV 516 (521)
Q Consensus 473 ~gL~yLH~~~~~~ivH~dlk~~NILld~~~--~~kl~DfGla~~~~ 516 (521)
.||+|||+. +|+||||||+|||++.++ .+||+|||+++.+.
T Consensus 179 ~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~ 221 (345)
T 3hko_A 179 SALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFY 221 (345)
T ss_dssp HHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGG
T ss_pred HHHHHHHHC---CccccCCChhhEEEecCCCceEEEeecccccccc
Confidence 999999999 999999999999998776 89999999998653
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-25 Score=216.23 Aligned_cols=143 Identities=15% Similarity=0.257 Sum_probs=124.7
Q ss_pred hhhCcCCCeeEEEEEeCC-C-------CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCce
Q 009972 364 NIIGSSPDSLVYKGTMKG-G-------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~-------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 435 (521)
+.||+|+||.||+|+... + ..||+|.+.... ....+.+.+|+.++.+++||||+++++++.+.+ ..
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 87 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD--EN 87 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT--CC
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC--CC
Confidence 789999999999998863 3 469999874322 234567999999999999999999999998876 78
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--------eeeC
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--------PKVS 507 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~--------~kl~ 507 (521)
++||||+++|+|.+++.... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++. +||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999997443 3489999999999999999999999 9999999999999998887 9999
Q ss_pred CCchhhhcc
Q 009972 508 PLCLSFLLV 516 (521)
Q Consensus 508 DfGla~~~~ 516 (521)
|||+++...
T Consensus 164 Dfg~~~~~~ 172 (289)
T 4fvq_A 164 DPGISITVL 172 (289)
T ss_dssp CCCSCTTTS
T ss_pred cCccccccc
Confidence 999987653
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-25 Score=213.69 Aligned_cols=148 Identities=24% Similarity=0.277 Sum_probs=117.5
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+.. ++.||+|.+............+.+.+|+++++.++||||+++++++...+ ..++||||++
T Consensus 13 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 89 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVMEFAR 89 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEEECCT
T ss_pred eeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEEEcCC
Confidence 78999999999999985 78899999854433222334567999999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--------CCCeeeCCCchhhhc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--------DFSPKVSPLCLSFLL 515 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~--------~~~~kl~DfGla~~~ 515 (521)
+|+|.+++.. ..+++..+..++.|++.||+|||+....+|+||||||+||++++ ++.+||+|||+++.+
T Consensus 90 ~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~ 166 (271)
T 3dtc_A 90 GGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW 166 (271)
T ss_dssp TEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----
T ss_pred CCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccc
Confidence 9999999853 25899999999999999999999982223999999999999986 678999999999865
Q ss_pred cc
Q 009972 516 VS 517 (521)
Q Consensus 516 ~~ 517 (521)
..
T Consensus 167 ~~ 168 (271)
T 3dtc_A 167 HR 168 (271)
T ss_dssp --
T ss_pred cc
Confidence 43
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=217.12 Aligned_cols=147 Identities=22% Similarity=0.264 Sum_probs=129.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc--chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|+.. +|+.||+|.+....... .....+.+.+|+.++.+++||||+++++++.+.. ..++|||
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 95 (321)
T 2a2a_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--DVVLILE 95 (321)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEEEEEE
Confidence 88999999999999987 68999999986543221 1123567999999999999999999999998877 8999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~----~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++ .+||+|||+++.+.
T Consensus 96 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 96 LVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp CCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 99999999999743 3589999999999999999999999 999999999999999887 79999999998764
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 171 ~ 171 (321)
T 2a2a_A 171 D 171 (321)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-25 Score=214.35 Aligned_cols=145 Identities=21% Similarity=0.261 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+..... ........+.+|+.++++++||||+++++++.+.. ..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 91 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYA 91 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEecccc-chhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEEEecC
Confidence 78999999999999987 577899999854321 11223567899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 92 ~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 92 PLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp TTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 9999999996433 489999999999999999999998 99999999999999999999999999986543
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=218.96 Aligned_cols=149 Identities=22% Similarity=0.291 Sum_probs=117.4
Q ss_pred hhhCcCCCeeEEEEEeCCC----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCC----ce
Q 009972 364 NIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF----TR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~----~~ 435 (521)
+.||+|+||.||+|+.... ..||+|.+..... .....+.+.+|++++++++||||+++++++...... ..
T Consensus 29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred ceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence 7899999999999998643 2799998854321 223456799999999999999999999999876511 13
Q ss_pred EEEEeeCCCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCch
Q 009972 436 MLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGl 511 (521)
++||||+++|+|.+++... ....+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeeccc
Confidence 8999999999999998632 122589999999999999999999999 999999999999999999999999999
Q ss_pred hhhccc
Q 009972 512 SFLLVS 517 (521)
Q Consensus 512 a~~~~~ 517 (521)
++.+.+
T Consensus 184 a~~~~~ 189 (323)
T 3qup_A 184 SRKIYS 189 (323)
T ss_dssp ------
T ss_pred cccccc
Confidence 987643
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=7.7e-25 Score=219.29 Aligned_cols=145 Identities=23% Similarity=0.264 Sum_probs=125.5
Q ss_pred hhhCcCCCeeEEEEEeC--------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCc
Q 009972 364 NIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||.||+|+.. ++..||+|++.... .....+.+.+|+.++.++ +||||+++++++...+ .
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~ 115 (334)
T 2pvf_A 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--P 115 (334)
T ss_dssp EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--C
T ss_pred eEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC--c
Confidence 78999999999999873 46789999984321 233456789999999999 9999999999998876 7
Q ss_pred eEEEEeeCCCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 009972 435 RMLVFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 435 ~~lv~ey~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~ 500 (521)
.++||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||++++
T Consensus 116 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE 192 (334)
T ss_dssp CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECT
T ss_pred eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcC
Confidence 8999999999999999974321 2489999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhcc
Q 009972 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+++.+.
T Consensus 193 ~~~~kL~Dfg~~~~~~ 208 (334)
T 2pvf_A 193 NNVMKIADFGLARDIN 208 (334)
T ss_dssp TCCEEECCCTTCEECT
T ss_pred CCCEEEcccccccccc
Confidence 9999999999998654
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=223.07 Aligned_cols=148 Identities=22% Similarity=0.281 Sum_probs=119.7
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~ 435 (521)
++|. +.||+|+||.||+|+.. +|+.||+|++.... ......+.+.+|+.++.+++ ||||+++++++...+....
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4454 78999999999999986 78999999984332 12334567889999999997 9999999999976554468
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++||||++ |+|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 99999998 5999998743 489999999999999999999999 9999999999999999999999999999865
Q ss_pred c
Q 009972 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 160 ~ 160 (388)
T 3oz6_A 160 V 160 (388)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-25 Score=213.28 Aligned_cols=151 Identities=18% Similarity=0.236 Sum_probs=128.8
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. +.||+|+||.||+|+.. +++.||+|.+...... .....++.+|+..+..+ +||||+++++++.+.+ ..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~ 86 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG--SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HM 86 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT--SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eE
Confidence 4454 78999999999999997 7899999998543222 23456788999999999 9999999999998877 89
Q ss_pred EEEEeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-------------
Q 009972 436 MLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE------------- 500 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~------------- 500 (521)
++||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+. +|+||||||+||+++.
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence 99999999999999997431 24589999999999999999999999 9999999999999984
Q ss_pred ------CCCeeeCCCchhhhccc
Q 009972 501 ------DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ------~~~~kl~DfGla~~~~~ 517 (521)
...+||+|||+++....
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~ 186 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISS 186 (289)
T ss_dssp ------CCCEEECCCTTCEETTC
T ss_pred ccccCCceEEEEcccccccccCC
Confidence 44799999999887653
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=214.34 Aligned_cols=145 Identities=25% Similarity=0.312 Sum_probs=123.1
Q ss_pred hhhCcCCCeeEEEEEeCCC----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+..+. ..+|+|.+... ......+.+.+|+.++++++||||++++++|...+. ..++||
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v~ 106 (298)
T 3f66_A 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVL 106 (298)
T ss_dssp EEEEEETTEEEEEEEEC-----CEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEEE
T ss_pred ceeeecCCceEEEEEEecCCCceeEEEEEecccC---CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ceEEEE
Confidence 7899999999999997532 25788877432 123345679999999999999999999999765432 679999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++... ...+++.++..|+.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 107 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 107 PYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp ECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred eCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccc
Confidence 999999999999743 34589999999999999999999999 99999999999999999999999999998654
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-25 Score=221.31 Aligned_cols=147 Identities=18% Similarity=0.191 Sum_probs=127.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|+.. +++.||+|.+....... .....+.+.+|+.++.+++||||+++++++.+.+ ..++|
T Consensus 30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~lv 107 (335)
T 3dls_A 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG--FFQLV 107 (335)
T ss_dssp EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC--EEEEE
Confidence 78999999999999986 68899999986443110 1112335788999999999999999999998877 89999
Q ss_pred EeeCCCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+..| +|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 108 ~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182 (335)
T ss_dssp EECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence 9999877 9999997543 489999999999999999999999 999999999999999999999999999987653
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=216.61 Aligned_cols=145 Identities=21% Similarity=0.263 Sum_probs=127.1
Q ss_pred hhhCcCCCeeEEEEEeC-----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||++.+. +++.||+|++... ......+.+.+|++++++++||||+++++++.+.+....++|
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD---AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc---cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 78999999999998763 5778999998532 223445679999999999999999999999987544478999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++|+|.+++... .+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 114 ~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp ECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 9999999999999643 389999999999999999999999 999999999999999999999999999987653
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-25 Score=237.87 Aligned_cols=142 Identities=22% Similarity=0.287 Sum_probs=125.2
Q ss_pred hhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|.++ ++..||||.+.... .....++|.+|++++++++|||||+++++|... ..++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~---~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS---SEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC---CeEEEEEe
Confidence 7999999999999875 45679999985432 123456799999999999999999999999763 58999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++... ...+++.++..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 417 ~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 417 AGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp CTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred CCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 9999999999643 34699999999999999999999999 99999999999999999999999999999764
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=212.02 Aligned_cols=142 Identities=16% Similarity=0.153 Sum_probs=126.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..+|+|++..... ...+.+.+|++++++++||||+++++++.+.. ..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 88 (277)
T 3f3z_A 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIYLVMELC 88 (277)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEEEEEecc
Confidence 78999999999999987 577899999854322 23457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl---d~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++.++..|+.+++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+.
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 89 TGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 9999999986443 489999999999999999999999 99999999999999 788999999999998654
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=213.14 Aligned_cols=145 Identities=13% Similarity=0.141 Sum_probs=128.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.+|+|.+.... .......+.+.+|+.+++.++||||+++++++.+.+ ..++||||+
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 97 (294)
T 2rku_A 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELC 97 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEeecCCEEEEEEEECCCCceEEEEEechhh-ccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEEEEecC
Confidence 78999999999999997 57889999885432 222344567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 98 ~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 98 RRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp TTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 9999999986433 589999999999999999999999 99999999999999999999999999998654
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.3e-25 Score=214.00 Aligned_cols=145 Identities=15% Similarity=0.180 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. ++..+|+|++..... ....+.+.+|++++++++||||+++++++.+.. ..++||||+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 102 (285)
T 3is5_A 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRS---QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYIVMETC 102 (285)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred ceeccCCCeEEEEEEEccCCceEEEEEeecccc---chhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEEEEEeC
Confidence 88999999999999986 688999999854332 223467899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl---d~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ....+++..+..|+.+++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+.
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999998632 224589999999999999999999999 99999999999999 456889999999998654
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=223.45 Aligned_cols=150 Identities=19% Similarity=0.318 Sum_probs=128.3
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
.++|. +.||+|+||.||+|+.. +++.||+|.+.... .......+.+|+.++++++||||+++++++.+.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 34454 88999999999999875 36789999884321 223455799999999999999999999999887
Q ss_pred CCCceEEEEeeCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~ 502 (521)
+ ..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 101 ~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 101 Q--PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp S--SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred C--ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 6 7899999999999999986321 13579999999999999999999999 999999999999999999
Q ss_pred CeeeCCCchhhhcc
Q 009972 503 SPKVSPLCLSFLLV 516 (521)
Q Consensus 503 ~~kl~DfGla~~~~ 516 (521)
.+||+|||+++.+.
T Consensus 176 ~~kl~Dfg~~~~~~ 189 (322)
T 1p4o_A 176 TVKIGDFGMTRDIY 189 (322)
T ss_dssp CEEECCTTCCCGGG
T ss_pred eEEECcCccccccc
Confidence 99999999998654
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=211.57 Aligned_cols=145 Identities=26% Similarity=0.410 Sum_probs=123.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhh---HHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYL---ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. +++.||+|.+........... .+.+.+|+.++.+++||||+++++++.+. .++||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~lv~ 100 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP----PRMVM 100 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT----TEEEE
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC----CeEEE
Confidence 78999999999999986 789999999855432211111 16799999999999999999999999654 37999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeecCCCC-----eeeCCCchh
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFS-----PKVSPLCLS 512 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dlk~~NILld~~~~-----~kl~DfGla 512 (521)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. + |+||||||+|||++.++. +||+|||++
T Consensus 101 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~ 176 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176 (287)
T ss_dssp ECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred EecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence 9999999999887443 4699999999999999999999998 7 999999999999988776 999999999
Q ss_pred hhcc
Q 009972 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+...
T Consensus 177 ~~~~ 180 (287)
T 4f0f_A 177 QQSV 180 (287)
T ss_dssp BCCS
T ss_pred cccc
Confidence 7544
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.5e-25 Score=226.32 Aligned_cols=150 Identities=15% Similarity=0.204 Sum_probs=124.2
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCccceeeeEeecCCC
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
++|. +.||+|+||.||+|... +++.||+|++..+.... .......+.+|+.++++++||||+++++++...
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-- 212 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-- 212 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS--
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 4454 78999999999999986 68899999986543110 111223588999999999999999999998654
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeeeCCC
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKVSPL 509 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~---~~~kl~Df 509 (521)
..++||||+++|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 213 -~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 213 -DYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -EEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -ceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeec
Confidence 5799999999999999986443 589999999999999999999999 99999999999999654 45999999
Q ss_pred chhhhccc
Q 009972 510 CLSFLLVS 517 (521)
Q Consensus 510 Gla~~~~~ 517 (521)
|+|+.+..
T Consensus 287 G~a~~~~~ 294 (419)
T 3i6u_A 287 GHSKILGE 294 (419)
T ss_dssp STTTSCC-
T ss_pred ccceecCC
Confidence 99987654
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-25 Score=220.60 Aligned_cols=144 Identities=22% Similarity=0.284 Sum_probs=121.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCE----EEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||+|++. ++.. ||+|.+..... ....+.+.+|+.++++++||||+++++++.+. ..++|
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~v 92 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG---RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---SLQLV 92 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS---CSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---SEEEE
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---ccEEE
Confidence 78999999999999986 4554 66666532221 12224578899999999999999999999753 58999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++|+|.+++... ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 93 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 9999999999999743 23689999999999999999999999 999999999999999999999999999997643
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.8e-25 Score=212.80 Aligned_cols=148 Identities=20% Similarity=0.202 Sum_probs=126.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... .....+.+.+|+.++++++||||+++++++........++||||+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 78999999999999997 689999999854322 234456799999999999999999999988643323789999999
Q ss_pred CCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 443 SNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPP-----FTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++... ....+++..+..|+.|++.||+|||+. + |+||||||+||++++++.+||+|||+++.+
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 999999999742 234589999999999999999999998 6 999999999999999999999999999876
Q ss_pred c
Q 009972 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 167 ~ 167 (279)
T 2w5a_A 167 N 167 (279)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=210.66 Aligned_cols=143 Identities=20% Similarity=0.272 Sum_probs=127.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.+++.++||||+++++++.+.+ ..++||||+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 87 (276)
T 2yex_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYC 87 (276)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEEEEEec
Confidence 78999999999999987 689999999854332 233567899999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ..+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 88 ~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 88 SGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp TTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred CCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 999999999643 3589999999999999999999999 99999999999999999999999999997653
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-25 Score=213.88 Aligned_cols=143 Identities=19% Similarity=0.304 Sum_probs=124.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC------------
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES------------ 430 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------------ 430 (521)
+.||+|+||.||+|+.. +++.||+|.+.... ..+.+|++++.+++||||+++++++...
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 88 (284)
T 2a19_B 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSS 88 (284)
T ss_dssp EEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------
T ss_pred eeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccc
Confidence 78999999999999997 78999999985432 2467899999999999999999988541
Q ss_pred --CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCC
Q 009972 431 --SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 431 --~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~D 508 (521)
.....++||||+++|+|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 89 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEECc
Confidence 111479999999999999999754445689999999999999999999999 999999999999999999999999
Q ss_pred Cchhhhccc
Q 009972 509 LCLSFLLVS 517 (521)
Q Consensus 509 fGla~~~~~ 517 (521)
||+++.+..
T Consensus 166 fg~~~~~~~ 174 (284)
T 2a19_B 166 FGLVTSLKN 174 (284)
T ss_dssp CTTCEESSC
T ss_pred chhheeccc
Confidence 999887643
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=217.52 Aligned_cols=145 Identities=13% Similarity=0.141 Sum_probs=128.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.+|+|.+.... .......+.+.+|+.+++.++||||+++++++.+.+ ..++||||+
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 123 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELC 123 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhh-hcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEecC
Confidence 78999999999999997 57889999885432 222344567899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 124 ~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 124 RRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp TTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 9999999986433 489999999999999999999999 99999999999999999999999999998654
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-25 Score=214.45 Aligned_cols=144 Identities=16% Similarity=0.230 Sum_probs=117.3
Q ss_pred hhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+... +..||+|.+... ......+.+.+|+.++++++||||+++++++.+. ..++||
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~lv~ 94 (281)
T 1mp8_A 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIM 94 (281)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTT---TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred eEeeecCCeeEEEEEEecCCCCceEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC---ccEEEE
Confidence 789999999999999853 346888886422 1233456799999999999999999999998543 579999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.+
T Consensus 95 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 95 ELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp ECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred ecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 9999999999997443 3589999999999999999999999 999999999999999999999999999987653
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.4e-25 Score=226.56 Aligned_cols=146 Identities=17% Similarity=0.144 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC---CceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~ 439 (521)
+.||+|+||.||+|+.. +++.||||++.... ......+++.+|++++++++||||+++++++..... ...++||
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 78999999999999986 67889999985322 223345679999999999999999999999976531 2689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||++ |+|.+++... ..+++..+..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 110 e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp ECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred ecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 9997 5999999744 3589999999999999999999999 999999999999999999999999999987653
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=219.79 Aligned_cols=140 Identities=10% Similarity=0.110 Sum_probs=123.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||||.+..+.. .+.+.+|++++.++ +||||+++++++...+ ..++||||
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~lv~e~ 86 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAMVLEL 86 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEEEEEC
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEEEEEe
Confidence 78999999999999985 788999998754321 13488999999999 9999999999998876 88999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC-----eeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-----PKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~-----~kl~DfGla~~~~ 516 (521)
+ +|+|.+++... ...+++.++..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.+.
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 87 L-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 9 89999999753 23699999999999999999999999 9999999999999998887 9999999998754
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-25 Score=218.78 Aligned_cols=145 Identities=20% Similarity=0.235 Sum_probs=126.6
Q ss_pred hhhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++...+....++|
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 104 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 104 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence 7899999999999995 35788999998433 22345679999999999999999999999875444478999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..|+.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 105 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 105 MEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 99999999999997432 2589999999999999999999999 99999999999999999999999999998654
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=215.49 Aligned_cols=142 Identities=20% Similarity=0.262 Sum_probs=123.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++.++ +||||+++++++.+.+ ..++||||
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 92 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RFYLVFEK 92 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCS----SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCc----chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EEEEEEEc
Confidence 57999999999999976 78999999985432 12346789999999985 7999999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~---~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.+.
T Consensus 93 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 93 MRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred CCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 99999999997543 589999999999999999999999 9999999999999998776 9999999987653
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=210.89 Aligned_cols=146 Identities=21% Similarity=0.269 Sum_probs=128.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc--chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|+.. +++.||+|.+....... .....+.+.+|+.++.+++||||+++++++.+.. ..++|||
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 88 (283)
T 3bhy_A 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVVLILE 88 (283)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEEEEEe
Confidence 78999999999999997 68999999986543211 1123567999999999999999999999998876 8999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~----~~kl~DfGla~~~~ 516 (521)
|+++++|.+++.... .+++..+..++.+++.||+|||+. +++||||||+||++++++ .+||+|||+++.+.
T Consensus 89 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~ 163 (283)
T 3bhy_A 89 LVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163 (283)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred ecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence 999999999996433 589999999999999999999999 999999999999999877 89999999998654
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=216.75 Aligned_cols=144 Identities=17% Similarity=0.295 Sum_probs=125.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++.... ......+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 106 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYLVFEFV 106 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCS--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCC--CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEEEEecC
Confidence 78999999999999997 58999999985432 22344567889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 107 ~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 107 DHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp SEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred CcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 9999998875433 489999999999999999999999 99999999999999999999999999998654
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=218.02 Aligned_cols=144 Identities=26% Similarity=0.360 Sum_probs=122.2
Q ss_pred hhhCcCCCeeEEEEEeCCC-----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGG-----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|+.... ..||+|.+.... .......+.+|+.++.+++||||+++++++...+ ..++|
T Consensus 50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 124 (333)
T 1mqb_A 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PMMII 124 (333)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEE
T ss_pred cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--CcEEE
Confidence 6899999999999988532 359999884321 2334567999999999999999999999998876 79999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 125 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 125 TEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 99999999999997432 3589999999999999999999999 99999999999999999999999999998764
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=210.86 Aligned_cols=145 Identities=21% Similarity=0.240 Sum_probs=126.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 87 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDLV 87 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEEEEecC
Confidence 78999999999999986 688999999854432 2334567899999999999999999999998877 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~---~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+|||+++...+
T Consensus 88 ~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 88 TGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999886443 489999999999999999999999 9999999999999986655 99999999976543
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=218.15 Aligned_cols=152 Identities=21% Similarity=0.314 Sum_probs=131.0
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhcc-CCCccceeeeEeecC
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARI-NHENTGKLLGYCRES 430 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 430 (521)
.++|. +.||+|+||.||+|+.. +|+.||||.+....... .....+.+.+|+.++.++ +||||+++++++...
T Consensus 93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 34454 78999999999999996 78999999985443211 122346788999999999 899999999999887
Q ss_pred CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCc
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfG 510 (521)
. ..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||
T Consensus 173 ~--~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 173 S--FMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp S--EEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred C--EEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecC
Confidence 6 8999999999999999997433 489999999999999999999999 99999999999999999999999999
Q ss_pred hhhhccc
Q 009972 511 LSFLLVS 517 (521)
Q Consensus 511 la~~~~~ 517 (521)
+++.+.+
T Consensus 246 ~~~~~~~ 252 (365)
T 2y7j_A 246 FSCHLEP 252 (365)
T ss_dssp TCEECCT
T ss_pred cccccCC
Confidence 9887653
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=213.55 Aligned_cols=145 Identities=22% Similarity=0.300 Sum_probs=124.3
Q ss_pred hhhCcCCCeeEEEEEeCC-C---CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG-G---PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~---~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||+||+|+..+ + ..+|+|.+.... .....+.+.+|+.++++++||||+++++++.+.+. ..++||
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v~ 102 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPHVLL 102 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEEE
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccc---cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcEEEE
Confidence 789999999999998743 2 268999874321 22345679999999999999999999999986552 358999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+.+|+|.+++... ...+++.++..|+.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 103 e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 103 PYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp CCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred ecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 999999999999753 34589999999999999999999999 99999999999999999999999999998653
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.91 E-value=8.7e-25 Score=224.41 Aligned_cols=141 Identities=13% Similarity=0.143 Sum_probs=119.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhc-cCCCccceeeeEeec--CCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLAR-INHENTGKLLGYCRE--SSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~--~~~~~~~lv~ 439 (521)
++||+|+||+||+|+.. +++.||||++.. ...+.+|+.++.+ .+||||+++++++.. .+....++||
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~ 138 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 138 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc---------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence 57999999999999987 688999999842 1246788888754 489999999998864 1112689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.......+++..+..|+.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 139 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 139 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp ECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 999999999999865555699999999999999999999999 9999999999999997 7899999999998654
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=213.22 Aligned_cols=145 Identities=20% Similarity=0.271 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEFL 84 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCcc--chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC--ceEEEEEcc
Confidence 78999999999999997 689999999854322 1223457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ |+|.+++.......+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 85 ~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 85 H-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154 (299)
T ss_dssp S-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred c-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence 8 5999999765545689999999999999999999999 99999999999999999999999999998764
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=211.12 Aligned_cols=147 Identities=23% Similarity=0.228 Sum_probs=125.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC--CCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e 440 (521)
+.||+|+||.||+|... ++..||+|.+.... ......+.+.+|+.++++++||||+++++++... .....++|||
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRK--LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchh--hCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 57999999999999986 67889999885432 2234467799999999999999999999998652 1225899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeec-CCCCeeeCCCchhhhccc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLT-EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dlk~~NILld-~~~~~kl~DfGla~~~~~ 517 (521)
|+++|+|.+++.... .+++..+..|+.+++.||+|||+. + |+||||||+||+++ +++.+||+|||+++....
T Consensus 110 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 110 LMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred ecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 999999999997433 489999999999999999999998 6 99999999999998 789999999999976543
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=213.81 Aligned_cols=149 Identities=19% Similarity=0.186 Sum_probs=126.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... ++..||+|.+............+.+.+|+.++++++||||+++++++...+....++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 90 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC 90 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhc
Confidence 78999999999999986 68899999985443222223456799999999999999999999998644433789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++| |.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 91 ~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 91 VCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp SEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred cCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 986 77777654455699999999999999999999999 99999999999999999999999999998754
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-24 Score=215.33 Aligned_cols=147 Identities=18% Similarity=0.173 Sum_probs=128.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||+|.+...... ......+.+|+.++..+ +||||+++++++...+ ..++||||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~--~~~lv~e~ 110 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG--QDCRAEILHEIAVLELAKSCPRVINLHEVYENTS--EIILILEY 110 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETT--EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc--hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--eEEEEEEe
Confidence 68999999999999987 6899999998644322 23356789999999999 5699999999998877 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~~~~kl~DfGla~~~~~ 517 (521)
+++|+|.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.+..
T Consensus 111 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 111 AAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp CTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 9999999999755455799999999999999999999999 9999999999999987 78999999999987643
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.5e-25 Score=222.60 Aligned_cols=157 Identities=17% Similarity=0.115 Sum_probs=132.0
Q ss_pred cCHHHHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-----CCccc
Q 009972 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----HENTG 421 (521)
Q Consensus 350 ~~~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv 421 (521)
+++.+.....++|. +.||+|+||+||+|+.. +++.||||++... ....+.+..|+.++..++ ||||+
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 33333333445565 88999999999999995 6889999998421 223456788999999986 99999
Q ss_pred eeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-
Q 009972 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE- 500 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~- 500 (521)
++++++...+ ..++||||+ +|+|.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||+++
T Consensus 100 ~~~~~~~~~~--~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 100 KYHGKFMYYD--HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDP 173 (360)
T ss_dssp CEEEEEEETT--EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCT
T ss_pred cccceeeECC--eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccc
Confidence 9999998877 899999999 88999999865555699999999999999999999999 9999999999999975
Q ss_pred ------------------------CCCeeeCCCchhhhccc
Q 009972 501 ------------------------DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ------------------------~~~~kl~DfGla~~~~~ 517 (521)
++.+||+|||+|+....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~ 214 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD 214 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCC
Confidence 78999999999986543
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=211.29 Aligned_cols=143 Identities=22% Similarity=0.283 Sum_probs=125.1
Q ss_pred hhhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
..||+|+||.||+|++. ++..||+|.+.... .....+.+.+|++++.+++||||+++++++... ..++|||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~lv~e 89 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVME 89 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEecCC---CcEEEEE
Confidence 48999999999999874 56789999985432 233456799999999999999999999999543 5899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 90 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 90 MAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp CCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred eCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999999999633 34589999999999999999999999 99999999999999999999999999998764
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=9.9e-25 Score=219.65 Aligned_cols=146 Identities=20% Similarity=0.210 Sum_probs=123.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +|+.||+|++...... ......+.+.+|+.++.+++||||+++++++...+ ..++||||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 93 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLVFDF 93 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEEEEC
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ceEEEEEc
Confidence 78999999999999996 6899999998543211 11112346889999999999999999999998776 78999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++ +|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 94 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 94 MET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp CSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred CCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 986 899888643 34589999999999999999999999 99999999999999999999999999998764
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=215.86 Aligned_cols=145 Identities=21% Similarity=0.299 Sum_probs=125.3
Q ss_pred hhhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++...+....++|
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 7899999999999985 36789999998532 22345679999999999999999999999876543368999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 123 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp ECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 99999999999997543 3589999999999999999999999 99999999999999999999999999998764
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=217.56 Aligned_cols=143 Identities=22% Similarity=0.293 Sum_probs=119.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEE----EEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEI----AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~v----avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|+.. +++.+ |+|.+... ......+.+.+|+.++.+++||||+++++++... ..++|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---~~~~v 94 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLI 94 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC---SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS---SEEEE
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc---cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC---CceEE
Confidence 78999999999999985 45555 55554321 1223456799999999999999999999999875 47899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.+++.... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 95 ~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp ECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 99999999999997543 3589999999999999999999999 99999999999999999999999999998764
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.8e-25 Score=218.26 Aligned_cols=145 Identities=20% Similarity=0.300 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeCC-C-----CEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMKG-G-----PEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+... + ..||+|.+.... .....+.+.+|+.++.++ +||||+++++++...+ ..+
T Consensus 52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~ 126 (333)
T 2i1m_A 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG--PVL 126 (333)
T ss_dssp EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCE
T ss_pred eEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC--ceE
Confidence 789999999999999853 2 479999884322 223456799999999999 8999999999998876 789
Q ss_pred EEEeeCCCCChhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCe
Q 009972 437 LVFDYASNGTLYEHLHYGE------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~ 504 (521)
+||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+
T Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp EEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEE
T ss_pred EEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeE
Confidence 9999999999999986321 23579999999999999999999999 99999999999999999999
Q ss_pred eeCCCchhhhcc
Q 009972 505 KVSPLCLSFLLV 516 (521)
Q Consensus 505 kl~DfGla~~~~ 516 (521)
||+|||+++.+.
T Consensus 204 kl~Dfg~~~~~~ 215 (333)
T 2i1m_A 204 KIGDFGLARDIM 215 (333)
T ss_dssp EBCCCGGGCCGG
T ss_pred EECccccccccc
Confidence 999999998654
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-24 Score=216.75 Aligned_cols=142 Identities=18% Similarity=0.209 Sum_probs=122.1
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. +.||+|+||.||+|+.+ +++.||+|.+..... .+.+|++++.++ +||||+++++++.+.+ ..
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~ 91 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YV 91 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EE
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EE
Confidence 4454 78999999999999997 688999999853321 245688888888 7999999999998877 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC----CCeeeCCCch
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED----FSPKVSPLCL 511 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~----~~~kl~DfGl 511 (521)
++||||+++|+|.+++.... .+++..+..++.+|+.||+|||+. +|+||||||+|||+.++ +.+||+|||+
T Consensus 92 ~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 99999999999999997543 589999999999999999999999 99999999999998433 3599999999
Q ss_pred hhhcc
Q 009972 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
++.+.
T Consensus 167 a~~~~ 171 (342)
T 2qr7_A 167 AKQLR 171 (342)
T ss_dssp CEECB
T ss_pred cccCc
Confidence 98764
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=218.87 Aligned_cols=147 Identities=12% Similarity=0.123 Sum_probs=128.3
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccch-------------hhHHHHHHHHHHHhccCCCccceeeeEeecC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTG-------------YLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
+.||+|+||.||+|+. +++.||+|.+......... ...+.+.+|+.++.+++||||+++++++.+.
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 115 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY 115 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence 7899999999999999 8899999998543211100 0116799999999999999999999999987
Q ss_pred CCCceEEEEeeCCCCChhhh------hhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCC
Q 009972 431 SPFTRMLVFDYASNGTLYEH------LHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~------l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~~ 503 (521)
+ ..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.
T Consensus 116 ~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~~~ 190 (348)
T 2pml_X 116 D--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKNGR 190 (348)
T ss_dssp S--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTTSC
T ss_pred C--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCCCc
Confidence 7 89999999999999999 654335579999999999999999999998 8 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009972 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+++.+.
T Consensus 191 ~kl~dfg~~~~~~ 203 (348)
T 2pml_X 191 VKLSDFGESEYMV 203 (348)
T ss_dssp EEECCCTTCEECB
T ss_pred EEEeccccccccc
Confidence 9999999998754
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=226.19 Aligned_cols=146 Identities=20% Similarity=0.270 Sum_probs=128.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||++...... .....+.+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 32 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 108 (484)
T 3nyv_A 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGEVY 108 (484)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEecC
Confidence 78999999999999997 7899999998543221 1234567999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl---d~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 109 ~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 109 TGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 9999999997543 489999999999999999999999 99999999999999 5678999999999987654
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=216.58 Aligned_cols=142 Identities=15% Similarity=0.156 Sum_probs=124.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC--CccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||++...+++.||+|++..... .....+.+.+|+.++.+++| |||+++++++...+ ..++||||
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~e~ 90 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVMEC 90 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeecccc--chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEEEEEeC
Confidence 78999999999999998899999999854332 23445679999999999987 99999999999877 89999995
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
.+|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 91 -~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 91 -GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp -CSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred -CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 5789999997543 589999999999999999999999 999999999999997 5789999999998764
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=211.64 Aligned_cols=145 Identities=17% Similarity=0.231 Sum_probs=126.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+...... .....+.+.+|++++.+++||||+++++++.+.+ ..++||||+
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 96 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYLMLEFA 96 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEEEEEeC
Confidence 78999999999999987 5778999988543211 1223467899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 97 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 97 PRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp TTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 9999999997443 489999999999999999999999 99999999999999999999999999987543
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=211.96 Aligned_cols=148 Identities=20% Similarity=0.258 Sum_probs=127.4
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC-----
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----- 431 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 431 (521)
++|. +.||+|+||.||+|+.. +++.||+|.+... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 4454 78999999999999986 7899999998432 223467899999999999999999999886421
Q ss_pred ------CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCee
Q 009972 432 ------PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 432 ------~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~k 505 (521)
....++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 126799999999999999997433 3578999999999999999999999 999999999999999999999
Q ss_pred eCCCchhhhcc
Q 009972 506 VSPLCLSFLLV 516 (521)
Q Consensus 506 l~DfGla~~~~ 516 (521)
|+|||+++.+.
T Consensus 157 l~dfg~~~~~~ 167 (303)
T 1zy4_A 157 IGDFGLAKNVH 167 (303)
T ss_dssp ECCCCCCSCTT
T ss_pred EeeCcchhhcc
Confidence 99999998654
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=212.05 Aligned_cols=142 Identities=28% Similarity=0.429 Sum_probs=118.2
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..+ .||+|.+..... .....+.|.+|+.++++++||||+++++++... ..++||||++
T Consensus 30 ~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~e~~~ 102 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVTQWCE 102 (289)
T ss_dssp EEEEECSSEEEEEEESSS--EEEEEEESCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEECCC
T ss_pred eEecCCCCeEEEEEEEcC--ceEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEEEEecC
Confidence 789999999999998754 599999854432 234456799999999999999999999987544 5799999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++... ...+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 103 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 103 GSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred CCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccc
Confidence 99999999643 34589999999999999999999999 99999999999999999999999999998654
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=217.43 Aligned_cols=147 Identities=19% Similarity=0.252 Sum_probs=122.3
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.. +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 109 (329)
T 3gbz_A 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLH 109 (329)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEE
T ss_pred hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEE
Confidence 4454 78999999999999986 788999999854322 2233456789999999999999999999999877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-----cCCCCeeeCCCch
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL-----TEDFSPKVSPLCL 511 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl-----d~~~~~kl~DfGl 511 (521)
+||||+++ +|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+
T Consensus 110 lv~e~~~~-~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEEECCSE-EHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEEecCCC-CHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 99999985 9999997543 489999999999999999999999 99999999999999 4556699999999
Q ss_pred hhhcc
Q 009972 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
++.+.
T Consensus 184 a~~~~ 188 (329)
T 3gbz_A 184 ARAFG 188 (329)
T ss_dssp HHHHC
T ss_pred ccccC
Confidence 98764
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=219.38 Aligned_cols=144 Identities=17% Similarity=0.199 Sum_probs=127.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+.... .....+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 113 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEHM 113 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEEEECC
Confidence 68999999999999997 68899999985432 2344567999999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..|+.+++.||+|||+.+ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 114 ~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 114 DGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 9999999997543 4899999999999999999999832 79999999999999999999999999987653
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.3e-25 Score=224.33 Aligned_cols=148 Identities=13% Similarity=0.093 Sum_probs=119.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHH---HHHhccCCCccceee-------eEeecCCC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREV---ADLARINHENTGKLL-------GYCRESSP 432 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~---~~l~~l~H~niv~l~-------g~~~~~~~ 432 (521)
+.||+|+||+||+|+.. +|+.||||++..... ......+.+.+|+ +++++++|||||+++ +++.+.+.
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC--CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeeccc-cchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 78999999999999985 689999999864322 1233456799999 556666899999998 55554421
Q ss_pred ----------C-----ceEEEEeeCCCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 009972 433 ----------F-----TRMLVFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (521)
Q Consensus 433 ----------~-----~~~lv~ey~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk 492 (521)
. ..++||||+ +|+|.+++.... ...++|..+..|+.||+.||+|||+. +|+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 0 278999999 589999997421 12355789999999999999999999 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhcc
Q 009972 493 SSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 493 ~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+|||+++++.+||+|||+|+...
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~ 257 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDG 257 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETT
T ss_pred HHHEEEcCCCCEEEEechhheecC
Confidence 999999999999999999998654
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=217.40 Aligned_cols=160 Identities=18% Similarity=0.151 Sum_probs=130.4
Q ss_pred HHHHHHHHhhhh--hhhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc-------chhhHHHHHHHHHHHhccCCCccce
Q 009972 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW-------TGYLELYFQREVADLARINHENTGK 422 (521)
Q Consensus 352 ~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~H~niv~ 422 (521)
..++....++|. +.||+|+||.||+|+..+|..||||++....... .....+.+.+|++++.+++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 456666666675 8999999999999999889999999985543211 1122367999999999999999999
Q ss_pred eeeEeecCC---CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 009972 423 LLGYCRESS---PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 423 l~g~~~~~~---~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld 499 (521)
+++++.... ....++||||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 999985422 225799999998 5899888743 34689999999999999999999999 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009972 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++...
T Consensus 169 ~~~~~kl~Dfg~~~~~~ 185 (362)
T 3pg1_A 169 DNNDITICDFNLAREDT 185 (362)
T ss_dssp TTCCEEECCTTC-----
T ss_pred CCCCEEEEecCcccccc
Confidence 99999999999997543
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=213.45 Aligned_cols=148 Identities=24% Similarity=0.357 Sum_probs=119.4
Q ss_pred hhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCC---ceE
Q 009972 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~ 436 (521)
+.||+|+||.||+|+... +..||+|.+..... .....+.+.+|+.++.+++||||+++++++...+.. ..+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred cceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 789999999999998752 34799999854322 233456799999999999999999999999865421 359
Q ss_pred EEEeeCCCCChhhhhhc----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 437 LVFDYASNGTLYEHLHY----GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
+||||+++|+|.+++.. .....+++..+..|+.++++||.|||+. +|+||||||+||++++++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999852 2234699999999999999999999999 9999999999999999999999999999
Q ss_pred hhcc
Q 009972 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+.+.
T Consensus 195 ~~~~ 198 (313)
T 3brb_A 195 KKIY 198 (313)
T ss_dssp ----
T ss_pred eecc
Confidence 8754
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=208.98 Aligned_cols=146 Identities=19% Similarity=0.259 Sum_probs=128.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|+.+++.++||||+++++++...+ ..++||||+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 93 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFMVMEYV 93 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccc-cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEEEEecc
Confidence 78999999999999997 789999999854321 11223467899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 94 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 94 SGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp CSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred CCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999996443 489999999999999999999999 999999999999999999999999999987643
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=235.78 Aligned_cols=148 Identities=18% Similarity=0.100 Sum_probs=128.1
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. ++||+|+||+||+|+.. +++.||||++..... ......+.+.+|..++..+ +||+|+++++++.+.+ ..
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~ 417 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RL 417 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EE
Confidence 4454 78999999999999987 678899999854321 1122345688999999988 7999999999998877 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++||||+++|+|.++++... .+++.++..|+.||+.||+|||+. +|+||||||+|||||+++.+||+|||+|+..
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 99999999999999997543 489999999999999999999999 9999999999999999999999999999863
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=215.86 Aligned_cols=158 Identities=18% Similarity=0.216 Sum_probs=130.4
Q ss_pred HHHHHHHHhhhh--hhhCcCCCeeEEEEEe------CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccce
Q 009972 352 RQELEVACEDFS--NIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGK 422 (521)
Q Consensus 352 ~~~l~~~~~~f~--~~lg~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~ 422 (521)
..++....++|. +.||+|+||.||+|+. .+++.||+|.+.... .....+.+.+|+.++.++ +||||++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeee
Confidence 333333345554 8899999999999985 246789999984322 223456799999999999 7999999
Q ss_pred eeeEeecCCCCceEEEEeeCCCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 009972 423 LLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTI 488 (521)
Q Consensus 423 l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 488 (521)
+++++...+. ..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+|
T Consensus 96 ~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H 171 (316)
T 2xir_A 96 LLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIH 171 (316)
T ss_dssp EEEEECCTTS-CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred EEEEEecCCC-ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 9999976542 58999999999999999975432 1289999999999999999999999 9999
Q ss_pred cCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 489 SELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 489 ~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||||+||++++++.+||+|||+++.+.
T Consensus 172 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 199 (316)
T 2xir_A 172 RDLAARNILLSEKNVVKICDFGLARDIY 199 (316)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccCccceEEECCCCCEEECCCccccccc
Confidence 9999999999999999999999998653
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-24 Score=211.58 Aligned_cols=147 Identities=18% Similarity=0.223 Sum_probs=122.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||+|++.... .......+.+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 114 (310)
T 2wqm_A 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFD-LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVLELA 114 (310)
T ss_dssp EEEECC--CEEEEEEETTTCCEEEEEEECTTS-SCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EeecCCCCceEEEEEEcCCCceEEEEeeehhh-ccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEEEEecC
Confidence 78999999999999985 78999999985432 122345567999999999999999999999998877 899999999
Q ss_pred CCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. .....+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 115 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp CSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred CCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999863 1234589999999999999999999999 99999999999999999999999999998654
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=218.50 Aligned_cols=145 Identities=20% Similarity=0.212 Sum_probs=119.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----CceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||+|++.... ......+++.+|++++++++||||+++++++..... ...++|
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEE
Confidence 78999999999999986 78999999984322 223345678999999999999999999999976531 246999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 109 ~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp EECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 9999 77999999742 489999999999999999999999 999999999999999999999999999987643
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=226.70 Aligned_cols=145 Identities=20% Similarity=0.221 Sum_probs=122.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. ++..||+|.+...... ......+.+|+.+++.++||||++++++|.+.. ..++||||+
T Consensus 43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 118 (494)
T 3lij_A 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYLVMECY 118 (494)
T ss_dssp EEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEecC
Confidence 78999999999999997 6889999998544321 223457899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+|+.+..
T Consensus 119 ~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 119 KGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999886443 489999999999999999999999 9999999999999976 45699999999987653
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-24 Score=210.12 Aligned_cols=144 Identities=19% Similarity=0.210 Sum_probs=125.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++...+ ..++||||+
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 101 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQV 101 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCC----C---HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCc----hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEeC
Confidence 48999999999999985 68899999985432 223467899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... ...+++..+..++.+++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.+.
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 9999999997542 33568999999999999999999999 9999999999999987 8999999999998654
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-24 Score=213.12 Aligned_cols=146 Identities=12% Similarity=0.097 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+.... .......+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 116 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETL-SSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYVDMRLI 116 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGG-GGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCccc-ccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEEEEEec
Confidence 78999999999999986 68899999985332 112334567999999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... .+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 117 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 117 NGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp CCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 9999999997433 489999999999999999999999 999999999999999999999999999876543
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-24 Score=211.97 Aligned_cols=145 Identities=20% Similarity=0.238 Sum_probs=123.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC--CCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e 440 (521)
+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++... .....++|||
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 110 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHE----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEE
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCC----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEE
Confidence 78999999999999985 78999999885432 23456789999999999999999999998632 1226899999
Q ss_pred eCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 441 YASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
|+++|+|.+++... ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp CCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred eCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999998742 334689999999999999999999999 9999999999999999999999999987754
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-24 Score=209.86 Aligned_cols=143 Identities=20% Similarity=0.258 Sum_probs=127.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.++.+++||||+++++++.... ..++||||+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 102 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIMEYL 102 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEEeC
Confidence 78999999999999986 688999999854322 223567999999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.+
T Consensus 103 ~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 103 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp TTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 99999999863 3589999999999999999999999 999999999999999999999999999976543
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-25 Score=218.76 Aligned_cols=150 Identities=21% Similarity=0.264 Sum_probs=127.7
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCC---
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS--- 431 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~--- 431 (521)
.+.|. +.||+|+||.||+|+.. +++.||+|.+..... ..+.+.+|+.++.++ +||||+++++++....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 34454 78999999999999985 788999999854322 235789999999999 8999999999997632
Q ss_pred -CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCc
Q 009972 432 -PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 432 -~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfG 510 (521)
....++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCc
Confidence 22789999999999999999755445689999999999999999999999 99999999999999999999999999
Q ss_pred hhhhcc
Q 009972 511 LSFLLV 516 (521)
Q Consensus 511 la~~~~ 516 (521)
+++.+.
T Consensus 175 ~~~~~~ 180 (326)
T 2x7f_A 175 VSAQLD 180 (326)
T ss_dssp TTC---
T ss_pred CceecC
Confidence 988754
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=211.86 Aligned_cols=142 Identities=13% Similarity=0.137 Sum_probs=122.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHH-hccCCCccceeeeEeec--CCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADL-ARINHENTGKLLGYCRE--SSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~--~~~~~~~lv~ 439 (521)
++||+|+||.||+|+.. +++.||+|.+.. ...+.+|+.++ ...+||||+++++++.. .+....++||
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 94 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 94 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc---------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEE
Confidence 67999999999999985 788999999832 12467888887 55699999999999875 1112689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.......+++..+..++.+++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 95 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp CCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 999999999999866555699999999999999999999999 9999999999999998 7899999999998765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 172 ~ 172 (299)
T 3m2w_A 172 G 172 (299)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-24 Score=212.85 Aligned_cols=146 Identities=15% Similarity=0.180 Sum_probs=121.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc----cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH----WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|+.. +++.||||.+...... ........+.+|++++.+++||||+++++++... ..++|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~lv 92 (322)
T 2ycf_A 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---DYYIV 92 (322)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEE
T ss_pred eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC---ceEEE
Confidence 88999999999999986 5789999998543211 1112234588999999999999999999999765 47999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eeeCCCchhhhc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~---~kl~DfGla~~~ 515 (521)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.+
T Consensus 93 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 167 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167 (322)
T ss_dssp EECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence 9999999999998643 3589999999999999999999999 9999999999999987654 999999999876
Q ss_pred cc
Q 009972 516 VS 517 (521)
Q Consensus 516 ~~ 517 (521)
..
T Consensus 168 ~~ 169 (322)
T 2ycf_A 168 GE 169 (322)
T ss_dssp CC
T ss_pred cc
Confidence 43
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=214.64 Aligned_cols=144 Identities=24% Similarity=0.372 Sum_probs=123.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCE--EEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPE--IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~--vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. ++.. +|+|.+.... .....+.+.+|++++.++ +||||+++++++.+.+ ..++||
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~lv~ 105 (327)
T 1fvr_A 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLAI 105 (327)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ceEEEE
Confidence 78999999999999986 4554 4888874321 122345689999999999 9999999999998877 899999
Q ss_pred eeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCee
Q 009972 440 DYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~k 505 (521)
||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEE
Confidence 9999999999997532 24689999999999999999999999 999999999999999999999
Q ss_pred eCCCchhhhc
Q 009972 506 VSPLCLSFLL 515 (521)
Q Consensus 506 l~DfGla~~~ 515 (521)
|+|||+++..
T Consensus 183 L~Dfg~~~~~ 192 (327)
T 1fvr_A 183 IADFGLSRGQ 192 (327)
T ss_dssp ECCTTCEESS
T ss_pred EcccCcCccc
Confidence 9999998743
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=212.57 Aligned_cols=142 Identities=23% Similarity=0.348 Sum_probs=118.5
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+.. ++.||+|++.. ....+.|.+|++++++++||||+++++++.+ ..++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~e~~~ 82 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIES------ESERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAE 82 (307)
T ss_dssp EEEECCSSSEEEEEEET-TEEEEEEECSS------TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEEECCT
T ss_pred eEeecCCCceEEEEEEC-CeeEEEEEecC------hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEEEcCC
Confidence 78999999999999985 57899998732 1234679999999999999999999999873 4689999999
Q ss_pred CCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC-eeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-PKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~-~kl~DfGla~~~~ 516 (521)
+|+|.++++.... ..+++..+..++.|+++||+|||+....+|+||||||+||++++++. +||+|||+++.+.
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~ 157 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 157 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence 9999999975432 24789999999999999999999932238999999999999998886 7999999997654
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=226.32 Aligned_cols=145 Identities=21% Similarity=0.258 Sum_probs=127.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|++...... ......+.+|++++++++||||+++++++.+.. ..++||||+
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 103 (486)
T 3mwu_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELY 103 (486)
T ss_dssp EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEEEEEcC
Confidence 88999999999999987 7899999998543211 223467899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld---~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++.+..
T Consensus 104 ~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 104 TGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999986443 489999999999999999999999 999999999999995 566899999999987643
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-24 Score=211.33 Aligned_cols=141 Identities=18% Similarity=0.188 Sum_probs=123.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+..... ...+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 98 (302)
T 2j7t_A 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSE----EELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMIEFC 98 (302)
T ss_dssp EEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH----HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEEEEEeC
Confidence 78999999999999997 588999998854322 23467899999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
++|+|.+++.... ..+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 99 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 99 PGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166 (302)
T ss_dssp TTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred CCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence 9999999986422 3589999999999999999999999 999999999999999999999999999764
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=210.66 Aligned_cols=142 Identities=24% Similarity=0.297 Sum_probs=122.5
Q ss_pred hhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|.+. +++.||+|.+..... .....+++.+|+.++..++||||+++++++.. + ..++||||
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e~ 98 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SWMLVMEM 98 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SEEEEEEC
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--CcEEEEEe
Confidence 8999999999999653 467899999854322 23345679999999999999999999999954 3 58999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 99 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 99 AELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp CTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred CCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 99999999997543 489999999999999999999999 99999999999999999999999999998664
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-24 Score=210.48 Aligned_cols=146 Identities=23% Similarity=0.235 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-----cchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-----WTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-----~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+.. +++.||+|.+...... ......+.+.+|++++.+++ ||||+++++++...+ ..+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~~ 100 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--FFF 100 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEE
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC--eEE
Confidence 78999999999999996 6889999998543211 11223467889999999995 999999999998876 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 101 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 175 (298)
T 1phk_A 101 LVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175 (298)
T ss_dssp EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence 999999999999999743 3589999999999999999999999 99999999999999999999999999998654
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=209.74 Aligned_cols=144 Identities=17% Similarity=0.189 Sum_probs=123.2
Q ss_pred hhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+..+ +..||+|.+.... .....+.+.+|+.++++++||||+++++++.+. ..++||
T Consensus 18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~ 91 (281)
T 3cc6_A 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---PTWIIM 91 (281)
T ss_dssp EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CCEEEE
Confidence 789999999999998753 2359999874321 223456799999999999999999999998754 468999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 92 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 92 ELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp ECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred ecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 9999999999997432 3589999999999999999999999 999999999999999999999999999987643
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=9e-25 Score=217.90 Aligned_cols=143 Identities=21% Similarity=0.249 Sum_probs=122.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++...... .....+.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 82 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFEYL 82 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEEEEECC
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEEEeccc
Confidence 78999999999999997 7889999998543211 11123567999999999999999999998877 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 83 ~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 151 (324)
T 3mtl_A 83 D-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKS 151 (324)
T ss_dssp S-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred c-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence 8 59999987443 3589999999999999999999999 99999999999999999999999999987654
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-24 Score=224.35 Aligned_cols=144 Identities=18% Similarity=0.184 Sum_probs=119.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----CceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||+||+|+.. +++.||||++.... ......+++.+|+.+++.++||||+++++++..... ...++|
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEE
Confidence 78999999999999986 68899999985432 223345678999999999999999999999965431 257999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++ ++.+.+.. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+....
T Consensus 146 ~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp EECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred EeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 999986 57776642 389999999999999999999999 999999999999999999999999999987654
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-24 Score=225.62 Aligned_cols=147 Identities=19% Similarity=0.226 Sum_probs=124.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc---------chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW---------TGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~---------~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 433 (521)
+.||+|+||+||+|+.. ++..||+|.+....... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-- 119 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK-- 119 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--
Confidence 78999999999999987 67899999985432110 0123567899999999999999999999999877
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeeeCCCc
Q 009972 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKVSPLC 510 (521)
Q Consensus 434 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~---~~kl~DfG 510 (521)
..++||||+++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 194 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFG 194 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred EEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence 8999999999999999986443 489999999999999999999999 999999999999998775 69999999
Q ss_pred hhhhccc
Q 009972 511 LSFLLVS 517 (521)
Q Consensus 511 la~~~~~ 517 (521)
+++.+..
T Consensus 195 ~a~~~~~ 201 (504)
T 3q5i_A 195 LSSFFSK 201 (504)
T ss_dssp TCEECCT
T ss_pred CCEEcCC
Confidence 9987653
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.2e-24 Score=217.93 Aligned_cols=142 Identities=15% Similarity=0.155 Sum_probs=124.4
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC--CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++.+++ ||||+++++++...+ ..++|||
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~E- 136 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME- 136 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEE-
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEEEEEe-
Confidence 78999999999999998899999999854432 2344567999999999996 599999999998877 7999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+.+|+|.+++.... .+++.++..|+.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 137 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 137 CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 56789999997543 589999999999999999999999 999999999999995 5899999999998764
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-24 Score=213.89 Aligned_cols=146 Identities=23% Similarity=0.326 Sum_probs=121.3
Q ss_pred hhhh--hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc--CCCccceeeeEeecCCC--C
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLLGYCRESSP--F 433 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~g~~~~~~~--~ 433 (521)
++|. +.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++..... .
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 4454 89999999999999986 788999998422 123455566665554 99999999999987621 2
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeecCCCCeeeCC
Q 009972 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 434 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~dlk~~NILld~~~~~kl~D 508 (521)
..++||||+++|+|.++++.. .+++..+..++.+++.||+|||+.+ .++|+||||||+|||++.++.+||+|
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred ceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 689999999999999999643 4899999999999999999999763 44899999999999999999999999
Q ss_pred Cchhhhcc
Q 009972 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||+|+.+.
T Consensus 186 fg~a~~~~ 193 (337)
T 3mdy_A 186 LGLAVKFI 193 (337)
T ss_dssp CTTCEECC
T ss_pred CCCceeec
Confidence 99997653
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=220.37 Aligned_cols=145 Identities=15% Similarity=0.222 Sum_probs=119.7
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC-----
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----- 431 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 431 (521)
++|. +.||+|+||+||+|+.. +|+.||+|++..... ...+|+.+++.++||||+++++++....
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 4454 78999999999999985 789999999853322 1347999999999999999999985422
Q ss_pred -------------------------------CCceEEEEeeCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHH
Q 009972 432 -------------------------------PFTRMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYL 478 (521)
Q Consensus 432 -------------------------------~~~~~lv~ey~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yL 478 (521)
....++||||++ |+|.+.+.. .....+++..+..|+.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 124789999998 588877752 2234689999999999999999999
Q ss_pred hcCCCCCeeecCCCCCCeeec-CCCCeeeCCCchhhhcc
Q 009972 479 HTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 479 H~~~~~~ivH~dlk~~NILld-~~~~~kl~DfGla~~~~ 516 (521)
|+. +|+||||||+|||++ +++.+||+|||+|+.+.
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 193 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLI 193 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECC
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccC
Confidence 999 999999999999998 68999999999998754
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.3e-24 Score=214.62 Aligned_cols=146 Identities=21% Similarity=0.316 Sum_probs=124.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC------CCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~~~ 436 (521)
+.||+|+||.||+|+.. +|+.||+|++...... ......+.+|+.++..++||||+++++++.... ....+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS--SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEeccccc--ccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEE
Confidence 78999999999999995 7899999998544322 223456889999999999999999999997642 22589
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++ +|.+.+.... ..+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 101 lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 175 (351)
T ss_dssp EEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence 99999985 8888776432 3589999999999999999999999 99999999999999999999999999998654
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=218.75 Aligned_cols=149 Identities=12% Similarity=0.094 Sum_probs=120.4
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccc-------hhhHHHHHHHHHHHhccCCCccceeeeEeecC
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWT-------GYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
+.||+|+||.||+|++++ ++.||+|.+........ ......+..|+..+..++||||+++++++...
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 120 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD 120 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec
Confidence 789999999999999864 47899998754321100 01122455677778888999999999998764
Q ss_pred CC--CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCCeee
Q 009972 431 SP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKV 506 (521)
Q Consensus 431 ~~--~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld--~~~~~kl 506 (521)
.. ...++||||+ +|+|.+++... ...+++.++..|+.|++.||+|||+. +|+||||||+|||++ .++.+||
T Consensus 121 ~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~~~kl 195 (364)
T 3op5_A 121 KNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYL 195 (364)
T ss_dssp ETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTTCEEE
T ss_pred cCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCCeEEE
Confidence 21 2589999999 99999999753 24599999999999999999999999 999999999999999 8899999
Q ss_pred CCCchhhhccc
Q 009972 507 SPLCLSFLLVS 517 (521)
Q Consensus 507 ~DfGla~~~~~ 517 (521)
+|||+|+.+.+
T Consensus 196 ~DFG~a~~~~~ 206 (364)
T 3op5_A 196 VDYGLAYRYCP 206 (364)
T ss_dssp CCCTTCEESSG
T ss_pred EECCcceeccc
Confidence 99999987643
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=212.66 Aligned_cols=145 Identities=17% Similarity=0.221 Sum_probs=112.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ....+++.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 95 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWLVMKLL 95 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSS--CEEEEEECC
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEEEehhc
Confidence 78999999999999985 688999998754321 123456889999999999999999999998877 799999999
Q ss_pred CCCChhhhhhc------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHY------GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. .....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 172 (303)
T 2vwi_A 96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLA 172 (303)
T ss_dssp TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence 99999999863 1234589999999999999999999999 99999999999999999999999999998654
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-24 Score=210.00 Aligned_cols=143 Identities=19% Similarity=0.262 Sum_probs=124.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||+|.+..... ...+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 88 (304)
T 2jam_A 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYLVMQLV 88 (304)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eeccCCCCceEEEEEECCCCCEEEEEEEecccc----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEEEEEcC
Confidence 78999999999999986 789999999854321 12356889999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl---d~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++....
T Consensus 89 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 89 SGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 9999999986433 489999999999999999999999 99999999999999 7889999999999986543
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=211.55 Aligned_cols=142 Identities=23% Similarity=0.311 Sum_probs=119.4
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+.. |+.||+|.+.... ..+.+.+|+.++.+++||||+++++++..... ..++||||++
T Consensus 27 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~e~~~ 98 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMA 98 (278)
T ss_dssp EEEEECSSCEEEEEEET-TEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECCCT
T ss_pred eEEecCCCceEEEEEEc-CCEEEEEEecchh------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEEecCC
Confidence 78999999999999885 7789999884321 24578999999999999999999999765432 5899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++.......+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999754333478999999999999999999999 99999999999999999999999999988654
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.2e-24 Score=212.54 Aligned_cols=145 Identities=20% Similarity=0.264 Sum_probs=122.1
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+.. ++..||+|.+.... ......++.+|+.++.+++||||+++++++.... ..++
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 110 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--PRFI 110 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEE
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--CcEE
Confidence 78999999999999842 56789999984321 2334567999999999999999999999998876 7899
Q ss_pred EEeeCCCCChhhhhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeeeCCC
Q 009972 438 VFDYASNGTLYEHLHYGER-----CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPL 509 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~~~~kl~Df 509 (521)
||||+++|+|.+++..... ..+++.++..++.+++.||.|||+. +|+||||||+|||++. +..+||+||
T Consensus 111 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 111 LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp EEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECcc
Confidence 9999999999999975321 3589999999999999999999999 9999999999999984 456999999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 188 g~~~~~~ 194 (327)
T 2yfx_A 188 GMARDIY 194 (327)
T ss_dssp HHHHHHH
T ss_pred ccccccc
Confidence 9998653
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=7.7e-24 Score=211.40 Aligned_cols=138 Identities=15% Similarity=0.154 Sum_probs=122.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||+|.+... ..+.+.+|+.++.+++ ||||+++++++.+......++||||
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~ 114 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence 78999999999999985 7889999998422 2356899999999997 9999999999987443478999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-~~kl~DfGla~~~~ 516 (521)
+++++|.+++. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+|+.+.
T Consensus 115 ~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 115 VNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp CCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred cCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 99999999985 378999999999999999999999 999999999999999776 89999999998654
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-24 Score=229.77 Aligned_cols=144 Identities=13% Similarity=0.064 Sum_probs=111.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecc------ccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE------HWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~------~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
...+.|+.|.++.++.. .|+.+++|.+..... .......++|.+|+++|+++ .|+||+++++++++++ ..
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~ 317 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SG 317 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EE
Confidence 34566666666655443 578899999854321 11223346799999999999 7999999999999887 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
||||||+++|+|.++|...+ +++.. +|+.||+.||+|+|+. +||||||||+|||+++++.+||+|||+|+.+
T Consensus 318 yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 99999999999999997543 46653 5899999999999999 9999999999999999999999999999976
Q ss_pred cc
Q 009972 516 VS 517 (521)
Q Consensus 516 ~~ 517 (521)
..
T Consensus 390 ~~ 391 (569)
T 4azs_A 390 PQ 391 (569)
T ss_dssp C-
T ss_pred CC
Confidence 54
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-24 Score=210.33 Aligned_cols=142 Identities=15% Similarity=0.238 Sum_probs=122.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||+|.+.... ..+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 106 (314)
T 3com_A 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT--DLWIVMEYC 106 (314)
T ss_dssp EECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEeecC
Confidence 78999999999999987 58999999985322 2346899999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ...+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||+++.+.+
T Consensus 107 ~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 107 GAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp TTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 999999998632 23589999999999999999999999 999999999999999999999999999976543
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.2e-24 Score=218.56 Aligned_cols=143 Identities=20% Similarity=0.274 Sum_probs=113.3
Q ss_pred hhhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
++||+|+||+||+|+.+ ++..||+|++.... ....+.+|+.++++++||||+++++++........++|||
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSS------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 57999999999999976 47889999984322 1246889999999999999999999996543337899999
Q ss_pred eCCCCChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeeeCCC
Q 009972 441 YASNGTLYEHLHYG-------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKVSPL 509 (521)
Q Consensus 441 y~~~g~L~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl----d~~~~~kl~Df 509 (521)
|+++ +|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+||
T Consensus 101 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 9985 888887521 123489999999999999999999999 99999999999999 77899999999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+|+.+.
T Consensus 177 g~a~~~~ 183 (405)
T 3rgf_A 177 GFARLFN 183 (405)
T ss_dssp TCCC---
T ss_pred CCceecC
Confidence 9998765
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.9e-24 Score=211.61 Aligned_cols=144 Identities=23% Similarity=0.285 Sum_probs=124.0
Q ss_pred hhhh--hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhc--cCCCccceeeeEeecCCC--C
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESSP--F 433 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~~--~ 433 (521)
++|. +.||+|+||.||+|+. +++.||+|.+... ..+.+.+|.+++.. ++||||+++++++..... .
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 42 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 4444 8999999999999998 5789999998422 23467888888887 799999999999987542 1
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeecCCCCee
Q 009972 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH--------TELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 434 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~dlk~~NILld~~~~~k 505 (521)
..++||||+++|+|.+++... .+++.++..++.+++.||+||| +. +|+||||||+|||+++++.+|
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEE
T ss_pred eeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEE
Confidence 589999999999999999743 4899999999999999999999 66 999999999999999999999
Q ss_pred eCCCchhhhccc
Q 009972 506 VSPLCLSFLLVS 517 (521)
Q Consensus 506 l~DfGla~~~~~ 517 (521)
|+|||+++.+..
T Consensus 188 L~Dfg~~~~~~~ 199 (342)
T 1b6c_B 188 IADLGLAVRHDS 199 (342)
T ss_dssp ECCCTTCEEEET
T ss_pred EEECCCceeccc
Confidence 999999987654
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.8e-24 Score=207.20 Aligned_cols=147 Identities=15% Similarity=0.116 Sum_probs=115.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++..... .....+.+.++...++.++||||+++++++.+.+ ..++||||+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e~~ 88 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICMELM 88 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEEEEECC
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEEEEehh
Confidence 78999999999999985 788999999854321 1222334555556688899999999999999876 799999999
Q ss_pred CCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+ |+|.+++.. .....+++..+..|+.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 89 ~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 89 D-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp S-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred c-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 8 488887753 12346999999999999999999999853 899999999999999999999999999987543
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.6e-24 Score=207.74 Aligned_cols=141 Identities=11% Similarity=0.127 Sum_probs=123.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||+|.+..... .+.+.+|+.++..+ +|+|++++++++.... ..++||||
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~e~ 87 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLVIDL 87 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCc------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeEEEEEe
Confidence 78999999999999974 788999998743321 23478899999999 8999999999998777 88999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC-----eeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-----PKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~-----~kl~DfGla~~~~ 516 (521)
+ +|+|.+++.... ..+++.++..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.+.
T Consensus 88 ~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 88 L-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred c-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 9 899999997443 3589999999999999999999999 9999999999999987776 9999999998765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 163 ~ 163 (298)
T 1csn_A 163 D 163 (298)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=206.20 Aligned_cols=140 Identities=13% Similarity=0.074 Sum_probs=121.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.|.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 113 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGV-LPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLVVAEWI 113 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC-SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccc-cCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEEEEEec
Confidence 78999999999999997 588999999854322 22334567999999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
++++|.+++... ....+..+|+.|++.||+|||+. +|+||||||+|||+++++.+||+++|...
T Consensus 114 ~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 114 RGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp CEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred CCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 999999999532 35567899999999999999999 99999999999999999999999887643
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.3e-24 Score=212.11 Aligned_cols=142 Identities=27% Similarity=0.461 Sum_probs=116.0
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHH--HHhccCCCccceeeeEeec---CCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVA--DLARINHENTGKLLGYCRE---SSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~--~l~~l~H~niv~l~g~~~~---~~~~~~~lv 438 (521)
+.||+|+||.||+|+. +++.||||++.... ...+..|.+ .+..++||||+++++++.. ......++|
T Consensus 19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred eecccCCCeEEEEEEE-CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 7899999999999987 67899999984321 223444444 4556899999999986542 222256899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL------GPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
|||+++|+|.+++.... .+|..+.+|+.|+++||+|||+.+ .++|+||||||+|||+++++.+||+|||++
T Consensus 91 ~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a 167 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167 (336)
T ss_dssp ECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred EecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence 99999999999996443 589999999999999999999874 348999999999999999999999999999
Q ss_pred hhcc
Q 009972 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+.+.
T Consensus 168 ~~~~ 171 (336)
T 3g2f_A 168 MRLT 171 (336)
T ss_dssp EECS
T ss_pred eecc
Confidence 8764
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=212.01 Aligned_cols=143 Identities=18% Similarity=0.199 Sum_probs=124.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC---CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. +|+.||||++.... .......+.+|++++++++||||+++++++.... ....++||
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 93 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ 93 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEE
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccc---cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEE
Confidence 78999999999999986 68899999984321 2234567889999999999999999999986541 12689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 94 e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 94 ELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp CCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 9998 5999998643 489999999999999999999999 99999999999999999999999999998764
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=210.32 Aligned_cols=145 Identities=17% Similarity=0.214 Sum_probs=123.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeec------CCCCce
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRE------SSPFTR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~------~~~~~~ 435 (521)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++.+++ ||||+++++++.. ......
T Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNE----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEccCCceEEEEEEECCCCcEEEEEEecCCc----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 78999999999999986 78999999884332 234567899999999996 9999999999842 112257
Q ss_pred EEEEeeCCCCChhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 436 MLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
++||||++ |+|.+++.. .....+++.++..|+.+++.||+|||+. + |+||||||+|||+++++.+||+|||++
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 99999996 699998863 2234599999999999999999999998 6 999999999999999999999999999
Q ss_pred hhcc
Q 009972 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+.+.
T Consensus 186 ~~~~ 189 (337)
T 3ll6_A 186 TTIS 189 (337)
T ss_dssp BCCS
T ss_pred eecc
Confidence 8764
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=9.1e-24 Score=214.29 Aligned_cols=144 Identities=22% Similarity=0.175 Sum_probs=109.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----CCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||+|++.... ......+.+.+|+++++.++||||+++++++.... ....++|
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEE
Confidence 78999999999999985 68899999984322 22334567889999999999999999999986531 1257999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 113 ~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 113 THLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp EECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred eccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 9999 5799998864 3589999999999999999999999 99999999999999999999999999998754
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=203.59 Aligned_cols=145 Identities=20% Similarity=0.246 Sum_probs=126.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+...... ....+.+.+|++++++++||||+++++++...+ ..++|+||+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 103 (287)
T 2wei_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELY 103 (287)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eEEEEEEcc
Confidence 88999999999999997 6889999998543321 233567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~---~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... .+++..+..++.+++.||+|||+. +++||||||+||+++.+ +.+||+|||+++.+..
T Consensus 104 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 104 TGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 9999999886433 489999999999999999999999 99999999999999754 4799999999987643
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.90 E-value=9.7e-24 Score=210.23 Aligned_cols=147 Identities=22% Similarity=0.271 Sum_probs=122.4
Q ss_pred hhhCcCCCeeEEEEEeC--CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCccceeeeEeec---CCCCce
Q 009972 364 NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRE---SSPFTR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~---~~~~~~ 435 (521)
+.||+|+||.||+|+.. +++.||+|++...... ......+.+|+.+++.+ +||||+++++++.. ......
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 94 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT--TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCccc--ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceE
Confidence 78999999999999983 6788999998654321 11123466788777766 89999999999862 112268
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
++||||++ |+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 95 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 170 (326)
T 1blx_A 95 TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170 (326)
T ss_dssp EEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred EEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcccccc
Confidence 99999998 6999999765555689999999999999999999999 9999999999999999999999999999875
Q ss_pred c
Q 009972 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 171 ~ 171 (326)
T 1blx_A 171 S 171 (326)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=207.49 Aligned_cols=142 Identities=18% Similarity=0.284 Sum_probs=116.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC------------
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES------------ 430 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------------ 430 (521)
+.||+|+||.||+|+.. +++.||+|++.... ....+++.+|++++++++||||+++++++...
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCS----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCC----hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 78999999999999997 58899999885432 23456789999999999999999999988432
Q ss_pred CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeeeCCC
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPL 509 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld-~~~~~kl~Df 509 (521)
.....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+||
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 1126899999998 699999863 2489999999999999999999999 999999999999997 5679999999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 166 g~~~~~~ 172 (320)
T 2i6l_A 166 GLARIMD 172 (320)
T ss_dssp TTCBCC-
T ss_pred ccccccC
Confidence 9998764
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=211.78 Aligned_cols=143 Identities=22% Similarity=0.221 Sum_probs=124.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC---CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. ++..||+|++.... .....+.+.+|++++.+++||||+++++++.... ....++||
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~ 109 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 109 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEE
Confidence 78999999999999986 67889999985322 2234467899999999999999999999997542 12589999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||++ |+|.+++... .+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 110 DLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp ECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred cccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 9998 4999998643 489999999999999999999999 99999999999999999999999999998764
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=216.90 Aligned_cols=143 Identities=18% Similarity=0.119 Sum_probs=124.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc------CCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI------NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++..+ .|+||+++++++...+ ..+
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~~~ 175 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN--HIC 175 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--EEE
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--eEE
Confidence 78999999999999886 5889999998432 22345678888888877 5679999999998877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--eeeCCCchhhh
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~--~kl~DfGla~~ 514 (521)
+||||++ |+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||+|+.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999997 5999999866555699999999999999999999999 9999999999999999887 99999999976
Q ss_pred ccc
Q 009972 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
...
T Consensus 252 ~~~ 254 (429)
T 3kvw_A 252 EHQ 254 (429)
T ss_dssp TTC
T ss_pred cCC
Confidence 543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=9.1e-24 Score=218.29 Aligned_cols=141 Identities=19% Similarity=0.277 Sum_probs=116.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----CCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||||++..... .+.+|++++++++|||||++++++.... ....++|
T Consensus 60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 78999999999999996 689999999843221 1347999999999999999999985421 1136799
Q ss_pred EeeCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeeeCCCchhhhc
Q 009972 439 FDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~-~~~kl~DfGla~~~ 515 (521)
|||+++ ++.+.+.. .....+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999986 67666542 2234689999999999999999999999 99999999999999965 67899999999875
Q ss_pred c
Q 009972 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 208 ~ 208 (420)
T 1j1b_A 208 V 208 (420)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-23 Score=211.26 Aligned_cols=144 Identities=17% Similarity=0.177 Sum_probs=119.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----CceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||.||+|+.. +++.||||++.... ......+.+.+|+.+++.++||||+++++++...+. ...++|
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEecccc--CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEE
Confidence 78999999999999986 68899999985432 123345678999999999999999999999975431 257999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++ +|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 109 ~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 109 MELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp EECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 999985 78888852 389999999999999999999999 999999999999999999999999999987643
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=196.89 Aligned_cols=177 Identities=22% Similarity=0.229 Sum_probs=130.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.|+|++|.+++..+..|..+++|++|+|++|+++...+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 57788888888887666678888888888888888886655666788888888888888886666677888888888888
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccCCcccc
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g 225 (521)
+|++++..|..|.++++|++|+|++|++++ +|..... ...++..+++++|.++. +..+++|+.|++++|++++
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFD-KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTT-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCc-cCHhHcc-CCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc
Confidence 888887777777888888888888888874 4432221 12567778888887765 3456788888888888875
Q ss_pred CCcccc---ccCCCcccCCCccCCCCC
Q 009972 226 SIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 226 ~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
..+..+ .+++.+++++|++.+.|.
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 196 VPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CCHHHhccccCCCEEEecCCCeeCCCc
Confidence 444434 455667788887777553
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.5e-24 Score=212.74 Aligned_cols=147 Identities=12% Similarity=0.083 Sum_probs=117.1
Q ss_pred hhhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccc-------hhhHHHHHHHHHHHhccCCCccceeeeEeecC--
Q 009972 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWT-------GYLELYFQREVADLARINHENTGKLLGYCRES-- 430 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-- 430 (521)
+.||+|+||.||+|+.. ++..+|+|.+........ ......+.+|+..+..++||||+++++++...
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~ 122 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK 122 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence 78999999999999986 567899998854322110 11224577899999999999999999998762
Q ss_pred CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC--CeeeCC
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF--SPKVSP 508 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~--~~kl~D 508 (521)
+....++||||+ +|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 123 ~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kL~D 196 (345)
T 2v62_A 123 GRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLAD 196 (345)
T ss_dssp SCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSEEECC
T ss_pred CCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcEEEEe
Confidence 122789999999 999999996443 689999999999999999999999 999999999999999887 999999
Q ss_pred Cchhhhcc
Q 009972 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||+|+.+.
T Consensus 197 fg~a~~~~ 204 (345)
T 2v62_A 197 YGLSYRYC 204 (345)
T ss_dssp CTTCEESS
T ss_pred CCCceecc
Confidence 99998763
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-23 Score=211.81 Aligned_cols=144 Identities=22% Similarity=0.242 Sum_probs=120.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCC----ceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF----TRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~----~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||+|++.... ......+.+.+|+.+++.++||||+++++++...+.. ..++|
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccc--cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEE
Confidence 78999999999999986 68899999985432 2234456789999999999999999999999865521 23999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||++ |+|.+++.. .+++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 126 ~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred Ecccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 99998 589888742 389999999999999999999999 999999999999999999999999999986543
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-23 Score=206.36 Aligned_cols=145 Identities=21% Similarity=0.254 Sum_probs=117.5
Q ss_pred hhhCcCCCeeEEEEEeC--CCC--EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK--GGP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~--~~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|++. +++ .||+|.+...... .....+.+.+|++++.+++||||+++++++.... .++|+
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~~v~ 99 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP---MKMVT 99 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---CEEEE
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---ceeeE
Confidence 78999999999999874 333 5899987543211 2234567999999999999999999999998753 78999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 100 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 100 ELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp ECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred ecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999997432 3589999999999999999999999 99999999999999999999999999998764
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.1e-24 Score=215.49 Aligned_cols=148 Identities=9% Similarity=0.028 Sum_probs=108.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc--CCCccceee-------eEeecCCC-
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLL-------GYCRESSP- 432 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~-------g~~~~~~~- 432 (521)
+.||+|+||.||+|+.. +++.||+|++...... .....+.+.+|+.++..+ +||||++++ +++.....
T Consensus 68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 78999999999999986 7889999998654321 233455678885544444 699988754 34332221
Q ss_pred --------------CceEEEEeeCCCCChhhhhhcCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 009972 433 --------------FTRMLVFDYASNGTLYEHLHYGERCQVSWTRR------MKIVIGIARGLKYLHTELGPPFTISELN 492 (521)
Q Consensus 433 --------------~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~ivH~dlk 492 (521)
...++||||++ |+|.+++.... ..+++..+ ..++.|++.||+|||+. +|+|||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrDik 221 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGHFT 221 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCcCC
Confidence 13799999999 89999997432 23466666 78889999999999999 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhccc
Q 009972 493 SSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 493 ~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+|||+++++.+||+|||+|+....
T Consensus 222 p~NIll~~~~~~kL~DFG~a~~~~~ 246 (371)
T 3q60_A 222 PDNLFIMPDGRLMLGDVSALWKVGT 246 (371)
T ss_dssp GGGEEECTTSCEEECCGGGEEETTC
T ss_pred HHHEEECCCCCEEEEecceeeecCC
Confidence 9999999999999999999987653
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-24 Score=214.85 Aligned_cols=139 Identities=10% Similarity=0.169 Sum_probs=120.1
Q ss_pred hhhCcCCCeeEEEEEeCC---------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccce------------
Q 009972 364 NIIGSSPDSLVYKGTMKG---------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGK------------ 422 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~---------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~------------ 422 (521)
+.||+|+||.||+|+... ++.||+|.+... +.+.+|++++.+++||||++
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 789999999999999874 788999997422 24789999999999999998
Q ss_pred ---eeeEeec-CCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 009972 423 ---LLGYCRE-SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (521)
Q Consensus 423 ---l~g~~~~-~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl 498 (521)
+++++.. .. ..++||||+ +|+|.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 119 i~~~~~~~~~~~~--~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 119 IPTCMGFGVHQDK--YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFV 192 (352)
T ss_dssp CCCCCEEEEETTT--EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEE
T ss_pred ccchhhccccCCc--EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence 5667665 33 789999999 99999999855345699999999999999999999999 99999999999999
Q ss_pred cCCC--CeeeCCCchhhhccc
Q 009972 499 TEDF--SPKVSPLCLSFLLVS 517 (521)
Q Consensus 499 d~~~--~~kl~DfGla~~~~~ 517 (521)
++++ .+||+|||+++.+.+
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~ 213 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCP 213 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSG
T ss_pred cCCCCceEEEecCcceeeccC
Confidence 9998 999999999987643
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-23 Score=215.96 Aligned_cols=142 Identities=15% Similarity=0.212 Sum_probs=116.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~ 439 (521)
++||+|+||+||+|+...+..+|+|++...... ..+|+++++.++||||+++++++.... ....++||
T Consensus 46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~--------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF--------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCTTS--------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCeEEEEEEecCcch--------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 789999999999999987777999988543221 246999999999999999999986433 11378999
Q ss_pred eeCCCCChhhhhh-cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld-~~~~~kl~DfGla~~~~ 516 (521)
||++++.+....+ ......+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||+|+.+.
T Consensus 118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 9998754333322 11234589999999999999999999999 999999999999999 79999999999998754
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-23 Score=209.34 Aligned_cols=143 Identities=22% Similarity=0.248 Sum_probs=122.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----CceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||||++.... ......+.+.+|+.++++++||||+++++++..... ...++|
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEE
Confidence 78999999999999986 68899999985432 223345678999999999999999999999976541 134999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 108 ~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp EECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred ecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 99998 599888742 389999999999999999999999 99999999999999999999999999998754
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-23 Score=227.15 Aligned_cols=144 Identities=16% Similarity=0.229 Sum_probs=124.5
Q ss_pred hhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|++.. +..||+|.+... ......+.|.+|+.++++++||||+++++++.+. ..++||
T Consensus 396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~~lv~ 469 (656)
T 2j0j_A 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIM 469 (656)
T ss_dssp EEEECCSSCCEEEEEECCSSSCCEEEEEEECSST---TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred eEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---ceEEEE
Confidence 789999999999999853 346888886432 1233456799999999999999999999998543 579999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.+
T Consensus 470 E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 470 ELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp ECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 9999999999997443 3589999999999999999999999 999999999999999999999999999987653
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=229.19 Aligned_cols=143 Identities=16% Similarity=0.227 Sum_probs=120.9
Q ss_pred hhhCcCCCeeEEEEEeC--CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCC---ceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~lv 438 (521)
+.||+|+||.||+|++. +++.||||.+.... .......+.+|+.++.+++||||+++++++...+.. ..++|
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv 162 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIV 162 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEE
Confidence 78999999999999986 58899999874321 223456789999999999999999999999865510 16999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++++|.+++.. .++|.++..|+.||+.||+|||+. +|+||||||+|||++++ .+||+|||+++.+..
T Consensus 163 ~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 163 MEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999999988753 589999999999999999999999 99999999999999986 899999999987654
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-23 Score=208.51 Aligned_cols=155 Identities=17% Similarity=0.166 Sum_probs=114.5
Q ss_pred HHHHHHhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC
Q 009972 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 354 ~l~~~~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
+.....++|. +.||+|+||.||+|+.. +++.||||++...... ...+.+|+..+..++||||+++++++...
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-----RNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-----CCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-----cHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 3445556665 89999999999999996 6899999988443221 23467788889999999999999998653
Q ss_pred CC-----CceEEEEeeCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCeeecCCCCCCeeecC-
Q 009972 431 SP-----FTRMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLH--TELGPPFTISELNSSAVYLTE- 500 (521)
Q Consensus 431 ~~-----~~~~lv~ey~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivH~dlk~~NILld~- 500 (521)
.. ...++||||+++ +|.+.+.. .....+++..+..++.+++.||+||| +. +|+||||||+|||++.
T Consensus 92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp CSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 31 127899999987 55544431 23345899999999999999999999 77 9999999999999997
Q ss_pred CCCeeeCCCchhhhccc
Q 009972 501 DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~~ 517 (521)
++.+||+|||+++.+..
T Consensus 168 ~~~~kl~Dfg~a~~~~~ 184 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSP 184 (360)
T ss_dssp TTEEEECCCTTCBCCCT
T ss_pred CCcEEEeeCCCceecCC
Confidence 89999999999987653
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.3e-24 Score=209.17 Aligned_cols=152 Identities=13% Similarity=0.109 Sum_probs=121.4
Q ss_pred Hhhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccc--hhhHHHHHHHHHHHhcc----CCCccceeeeEeec
Q 009972 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT--GYLELYFQREVADLARI----NHENTGKLLGYCRE 429 (521)
Q Consensus 359 ~~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~E~~~l~~l----~H~niv~l~g~~~~ 429 (521)
.++|. +.||+|+||.||+|+.. +++.||+|.+........ ......+.+|+.++.++ +||||+++++++..
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 34454 88999999999999885 688999999854321100 01223466799999988 89999999999987
Q ss_pred CCCCceEEEEee-CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeeeC
Q 009972 430 SSPFTRMLVFDY-ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVS 507 (521)
Q Consensus 430 ~~~~~~~lv~ey-~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld-~~~~~kl~ 507 (521)
.+ ..++|+|| +++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+
T Consensus 110 ~~--~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 110 QE--GFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred CC--eEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEE
Confidence 76 78999999 78999999997533 489999999999999999999999 999999999999999 88999999
Q ss_pred CCchhhhccc
Q 009972 508 PLCLSFLLVS 517 (521)
Q Consensus 508 DfGla~~~~~ 517 (521)
|||+++.+..
T Consensus 183 dfg~~~~~~~ 192 (312)
T 2iwi_A 183 DFGSGALLHD 192 (312)
T ss_dssp CCSSCEECCS
T ss_pred Ecchhhhccc
Confidence 9999987654
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-23 Score=202.72 Aligned_cols=146 Identities=14% Similarity=0.235 Sum_probs=121.6
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||.||+|+.. +++.||+|.+...... +++.+|+.++..++|++++..++++..... ..+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~ 81 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNV 81 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C------CCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEE
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc------hHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceE
Confidence 4444 78999999999999985 7889999986443221 247889999999999998888887754332 689
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeeeCCCchhh
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSF 513 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl---d~~~~~kl~DfGla~ 513 (521)
+||||+ +|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++
T Consensus 82 lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 999999 889999997433 3589999999999999999999999 99999999999999 789999999999998
Q ss_pred hccc
Q 009972 514 LLVS 517 (521)
Q Consensus 514 ~~~~ 517 (521)
.+..
T Consensus 157 ~~~~ 160 (296)
T 4hgt_A 157 KYRD 160 (296)
T ss_dssp ECBC
T ss_pred eccC
Confidence 7654
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-23 Score=206.31 Aligned_cols=141 Identities=12% Similarity=0.168 Sum_probs=115.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHH-HHHhccCCCccceeeeEeecCC--CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREV-ADLARINHENTGKLLGYCRESS--PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~-~~l~~l~H~niv~l~g~~~~~~--~~~~~lv~ 439 (521)
++||+|+||.||+|+.. +++.||+|++... . ...+|+ ..+..++||||+++++++.... ....++||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----P----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESS-----H----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----H----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 57999999999999997 6899999998431 1 122233 3356679999999999987521 11579999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.......+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 999999999999866555799999999999999999999999 9999999999999976 4569999999998654
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.8e-23 Score=202.64 Aligned_cols=142 Identities=15% Similarity=0.150 Sum_probs=123.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC--CCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+++..+++.||+|.+..... .....+.+.+|+.++.+++ ||||+++++++...+ ..++|||
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~e- 108 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME- 108 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEEEEEC-
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEEEEEe-
Confidence 78999999999999998899999999854332 2344567999999999997 599999999998877 8999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+.+|+|.+++.... .+++..+..++.++++||+|||+. +|+||||||+|||+++ +.+||+|||+++.+.
T Consensus 109 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 109 CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 56789999997543 589999999999999999999999 9999999999999965 899999999998754
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-23 Score=208.87 Aligned_cols=141 Identities=22% Similarity=0.347 Sum_probs=119.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..+ .+|+|.+...... ....+.+.+|+.++.+++||||+++++++.+.+ ..++||||++
T Consensus 39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~e~~~ 112 (319)
T 2y4i_B 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDN--EDQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIITSLCK 112 (319)
T ss_dssp CBCCCSSSSEEEEEEESS--SEEEEECCCCSCC--CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEECBCCC
T ss_pred eEeccCCceEEEEEEEcC--eEEEEEeecCCCC--HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEeeccc
Confidence 789999999999999865 4999988544321 122345788999999999999999999999877 7999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
+|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+||+++ ++.+||+|||+++..
T Consensus 113 ~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 113 GRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp SEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 999999997433 3589999999999999999999999 999999999999998 679999999998764
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6.3e-23 Score=201.35 Aligned_cols=142 Identities=14% Similarity=0.215 Sum_probs=121.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... .+++.+|+.++..++|++++..++++..... ..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e~~ 87 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVMELL 87 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSS------CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEECC
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc------hhHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEEEEEec
Confidence 78999999999999984 788999998754322 2358899999999999998888877754332 689999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl---d~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.+..
T Consensus 88 -~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 88 -GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred -CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 889999997333 3589999999999999999999999 99999999999999 5889999999999987654
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-23 Score=206.25 Aligned_cols=147 Identities=12% Similarity=0.097 Sum_probs=125.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccc--hhhHHHHHHHHHHHhccC--CCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT--GYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|+.. +++.||+|.+........ ....+.+.+|+.++.+++ ||||+++++++...+ ..++|
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~~~lv 126 (320)
T 3a99_A 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SFVLI 126 (320)
T ss_dssp EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--cEEEE
Confidence 78999999999999985 688999999854432110 012235778999999996 599999999999877 89999
Q ss_pred EeeCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeeeCCCchhhhcc
Q 009972 439 FDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld-~~~~~kl~DfGla~~~~ 516 (521)
+||+.. ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+++.+.
T Consensus 127 ~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~ 201 (320)
T 3a99_A 127 LERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK 201 (320)
T ss_dssp EECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccccccc
Confidence 999986 89999997533 589999999999999999999999 999999999999999 78999999999998765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 202 ~ 202 (320)
T 3a99_A 202 D 202 (320)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.4e-23 Score=205.02 Aligned_cols=143 Identities=15% Similarity=0.194 Sum_probs=123.8
Q ss_pred hhhCcCCCeeEEEEEe-C-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCc------cceeeeEeecCCCCce
Q 009972 364 NIIGSSPDSLVYKGTM-K-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN------TGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~~~~ 435 (521)
+.||+|+||.||+|.. . +++.||+|++... ....+.+.+|+.++..++|++ ++++++++...+ ..
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~--~~ 92 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG--HI 92 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT--EE
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC--cE
Confidence 7899999999999987 3 6788999998422 123457889999999887765 999999998877 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---------------
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--------------- 500 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~--------------- 500 (521)
++||||+ +|+|.+++......++++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 9999999 78999999866555689999999999999999999999 9999999999999987
Q ss_pred ----CCCeeeCCCchhhhccc
Q 009972 501 ----DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ----~~~~kl~DfGla~~~~~ 517 (521)
++.+||+|||+++....
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~ 189 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDE 189 (339)
T ss_dssp EEESCCCEEECCCSSCEETTS
T ss_pred ccccCCCceEeeCcccccCcc
Confidence 67899999999986543
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.6e-23 Score=209.77 Aligned_cols=131 Identities=18% Similarity=0.144 Sum_probs=108.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC--------CCccceeeeEeecC--CC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--------HENTGKLLGYCRES--SP 432 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~g~~~~~--~~ 432 (521)
+.||+|+||+||+|+.. +++.||+|++... ....+.+.+|++++..++ |+||+++++++... ..
T Consensus 43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~ 117 (397)
T 1wak_A 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNG 117 (397)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTE
T ss_pred EEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCC
Confidence 78999999999999986 6789999998432 233567899999999986 78899999998721 12
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~ 502 (521)
...++||||+ +|++.+++.......+++..+..|+.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 118 ~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 118 THICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCH
T ss_pred ceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccc
Confidence 2789999999 557777765454456999999999999999999999864 899999999999999775
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=216.31 Aligned_cols=136 Identities=11% Similarity=0.089 Sum_probs=109.2
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||+||+|+. .+..+++|+...+.... .....++|.+|++++++++||||+++..++...+ ..++||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lVm 418 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIMM 418 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEEE
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEEE
Confidence 6899999999999954 56789999875543211 1122456899999999999999997777766655 679999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.. +..|+.|+++||+|||+. +|+||||||+|||+++ .+||+|||+|+.+.+
T Consensus 419 E~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999963 568999999999999999 9999999999999998 999999999998754
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=211.96 Aligned_cols=141 Identities=14% Similarity=0.164 Sum_probs=118.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccc-eeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG-KLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||||++..+... .++.+|++++..++|++.+ .+..++...+ ..++||||
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~lvme~ 84 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------PQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNVLVMDL 84 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------CCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEEEEEEC
Confidence 78999999999999985 6899999987543221 2478999999999875554 4444555544 78999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl---d~~~~~kl~DfGla~~~~~ 517 (521)
+ +|+|.+++.... ..+++.+++.|+.||+.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.+..
T Consensus 85 ~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 85 L-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred C-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 9 889999997433 3599999999999999999999999 99999999999999 6889999999999987654
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=225.63 Aligned_cols=178 Identities=28% Similarity=0.416 Sum_probs=139.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++.+|..+..+++|++|+|++|++++.+|..++.+++|++|+|++|+++|.+|..++++++|+.|+|
T Consensus 466 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 545 (768)
T 3rgz_A 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEEC
T ss_pred CCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEEC
Confidence 46788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccccCCCCCchhhhC-----------------------------------------------------------------
Q 009972 150 QSNGLTGRLPAELGN----------------------------------------------------------------- 164 (521)
Q Consensus 150 s~N~l~g~~p~~~~~----------------------------------------------------------------- 164 (521)
++|+++|.+|..+..
T Consensus 546 s~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~ 625 (768)
T 3rgz_A 546 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625 (768)
T ss_dssp CSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECC
T ss_pred CCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCc
Confidence 888888777765432
Q ss_pred -----CCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccCCccccCCcccccc-
Q 009972 165 -----LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEY- 233 (521)
Q Consensus 165 -----l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~l~~- 233 (521)
+++|++|||++|+++|.+|..... ...+..+++++|.+++ +..+++|+.||||+|+++|.+|..+..
T Consensus 626 ~~~~~l~~L~~LdLs~N~l~g~ip~~l~~--l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIGS--MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CSCSSSBCCCEEECCSSCCBSCCCGGGGG--CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred hhhhccccccEEECcCCcccccCCHHHhc--cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 456788888888888888864332 3467778888888774 456788888888888888888877654
Q ss_pred --CCCcccCCCccCCCCC
Q 009972 234 --LPSTSFQGNCLQNKDP 249 (521)
Q Consensus 234 --l~~l~~~~N~l~~~~~ 249 (521)
|+.+++++|++.+..|
T Consensus 704 ~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 704 TMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp CCCSEEECCSSEEEEECC
T ss_pred CCCCEEECcCCcccccCC
Confidence 4556788887776554
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=199.89 Aligned_cols=144 Identities=15% Similarity=0.104 Sum_probs=109.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||+|.+..... .....+.+.++..+++.++||||+++++++...+ ..++||||+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e~~ 106 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIAMELM 106 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEEEecc
Confidence 78999999999999996 789999999854321 1222334555556788889999999999998877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++.+..+.. .....+++..+..++.++++||+|||+ . +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 107 -~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 107 -GTCAEKLKK-RMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp -SEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred -CCcHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 445554443 223458999999999999999999998 5 89999999999999999999999999997654
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.9e-22 Score=190.63 Aligned_cols=184 Identities=21% Similarity=0.274 Sum_probs=139.5
Q ss_pred CCCCccceeeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCC
Q 009972 56 DPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135 (521)
Q Consensus 56 ~~c~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (521)
+||.|.|.+|.. ..+.++++++.++. +|..+. +.|+.|+|++|++++..|..|..+++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC---CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 477899999952 34568888888875 555554 578888888888888777788888888888888888887777
Q ss_pred cccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccC
Q 009972 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHL 210 (521)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l 210 (521)
..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++ +|..... ....+..+++++|.++++ ..+
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFD-RLTKLKELRLNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCC-cChhHhc-cCCcccEEECcCCcCCccCHHHcCcC
Confidence 778888888888888888887666777888888888888888884 4432211 125677788888887653 457
Q ss_pred CCCCEEeccCCccccCCcccc---ccCCCcccCCCccCCC
Q 009972 211 SQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 211 ~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
++|+.|+|++|++++..|..+ .+++.+++++|++.+.
T Consensus 155 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 889999999999997666555 4566788999988775
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9e-23 Score=211.73 Aligned_cols=141 Identities=16% Similarity=0.122 Sum_probs=115.5
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +|||||++++++.+.+ ..++||||+
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~lv~E~~ 91 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYYCSETTDR--FLYIALELC 91 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGG-------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEECCC
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC--eEEEEEecC
Confidence 689999999998776678999999988432 124578999999886 8999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCC-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-------------CCe
Q 009972 443 SNGTLYEHLHYGERC-----QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-------------FSP 504 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~-------------~~~ 504 (521)
+ |+|.+++...... ..++..+..|+.||+.||+|||+. +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 6999999754321 113445678999999999999999 99999999999999754 489
Q ss_pred eeCCCchhhhccc
Q 009972 505 KVSPLCLSFLLVS 517 (521)
Q Consensus 505 kl~DfGla~~~~~ 517 (521)
||+|||+++.+..
T Consensus 168 kL~DFG~a~~~~~ 180 (434)
T 2rio_A 168 LISDFGLCKKLDS 180 (434)
T ss_dssp EECCCTTCEECCC
T ss_pred EEcccccceecCC
Confidence 9999999987653
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-22 Score=200.10 Aligned_cols=146 Identities=14% Similarity=0.098 Sum_probs=120.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH-HHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +|+.||+|++..... .....++.+|+. +++.++||||+++++++...+ ..++||||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~lv~e~ 102 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWICMEL 102 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEEEEee
Confidence 68999999999999996 688999999854321 223345666666 777889999999999998876 89999999
Q ss_pred CCCCChhhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHY---GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++ +|.+++.. .....+++..+..++.+++.||.|||+. ++|+||||||+||++++++.+||+|||+++.+..
T Consensus 103 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 103 MST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred cCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 985 88887752 2234689999999999999999999985 2899999999999999999999999999987543
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=186.40 Aligned_cols=176 Identities=20% Similarity=0.247 Sum_probs=142.9
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccC
Q 009972 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 57 ~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
.|.|.++.|... ..+++.|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 478999999742 24689999999999987777789999999999999999977777789999999999999
Q ss_pred CCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc
Q 009972 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~ 207 (521)
|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..... ..++..+++++|.+.+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~--l~~L~~L~l~~N~~~~- 162 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDR--LTSLQYIWLHDNPWDC- 162 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT--CTTCCEEECCSCCBCC-
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhcc--CCCccEEEecCCCeec-
Confidence 9999776777899999999999999999777777899999999999999999544322211 2466777777776653
Q ss_pred ccCCCCCEEeccCCccccCCccccccCCC
Q 009972 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~~l~~ 236 (521)
.+++|+.|+++.|+++|.+|..++.++.
T Consensus 163 -~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 -TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3456777777788888888777665543
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-22 Score=204.80 Aligned_cols=149 Identities=21% Similarity=0.146 Sum_probs=123.3
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CC-----ccceeeeEeecC
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HE-----NTGKLLGYCRES 430 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~g~~~~~ 430 (521)
++|. +.||+|+||+||+|+.. +++.||||++... .....++.+|+.++..++ |+ +|+++++++...
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 4444 78999999999999987 6788999998432 123456788888888885 55 499999999887
Q ss_pred CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCCeeeCC
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKVSP 508 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld--~~~~~kl~D 508 (521)
+ ..++||||++ |+|.+++.......+++..+..++.|++.||+|||+. ..+|+||||||+|||++ .++.+||+|
T Consensus 129 ~--~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 N--HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp T--EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred C--ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 6 8999999997 5999999865545699999999999999999999952 23899999999999994 578899999
Q ss_pred Cchhhhccc
Q 009972 509 LCLSFLLVS 517 (521)
Q Consensus 509 fGla~~~~~ 517 (521)
||+|+.+..
T Consensus 205 FG~a~~~~~ 213 (382)
T 2vx3_A 205 FGSSCQLGQ 213 (382)
T ss_dssp CTTCEETTC
T ss_pred ccCceeccc
Confidence 999987654
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.7e-23 Score=202.89 Aligned_cols=173 Identities=27% Similarity=0.407 Sum_probs=135.9
Q ss_pred CCEEEEEecC-CCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 70 DRVLKINISG-SSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~-n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|+|++ |.+.+.+|..|+.+++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 5789999995 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchhhhCCC-CCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccCCc
Q 009972 149 LQSNGLTGRLPAELGNLI-SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~ 222 (521)
|++|++++.+|..+++++ +|++|++++|++++.+|..... ..+..+++++|.+++ +..+++|+.|++++|+
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~---l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN---LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG---CCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhC---CcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCc
Confidence 999999999999999998 9999999999999888864332 125555666655542 2334455555555555
Q ss_pred cccCCcc--ccccCCCcccCCCccC
Q 009972 223 FVGSIPK--CLEYLPSTSFQGNCLQ 245 (521)
Q Consensus 223 l~g~ip~--~l~~l~~l~~~~N~l~ 245 (521)
+++.+|. .+.+|+.+++++|.+.
T Consensus 233 l~~~~~~~~~l~~L~~L~Ls~N~l~ 257 (313)
T 1ogq_A 233 LAFDLGKVGLSKNLNGLDLRNNRIY 257 (313)
T ss_dssp ECCBGGGCCCCTTCCEEECCSSCCE
T ss_pred eeeecCcccccCCCCEEECcCCccc
Confidence 5544442 1233444445555444
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=201.60 Aligned_cols=143 Identities=13% Similarity=0.166 Sum_probs=121.8
Q ss_pred hhhCcCCCeeEEEEEeC-CC-CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCc------cceeeeEeecCCCCce
Q 009972 364 NIIGSSPDSLVYKGTMK-GG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN------TGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~~~~ 435 (521)
+.||+|+||+||+|+.. ++ ..||+|.+... ....+.+.+|+.++.+++|++ ++.+.+++...+ ..
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~--~~ 97 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG--HM 97 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT--EE
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC--eE
Confidence 78999999999999986 44 68999998422 233567889999999998776 899999998776 89
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-----------------
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----------------- 498 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILl----------------- 498 (521)
++||||+ +|++.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccccc
Confidence 9999999 56787777655545699999999999999999999999 99999999999999
Q ss_pred --cCCCCeeeCCCchhhhccc
Q 009972 499 --TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 499 --d~~~~~kl~DfGla~~~~~ 517 (521)
+.++.+||+|||+++....
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~ 194 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHE 194 (355)
T ss_dssp EEESCCCEEECCCTTCEETTS
T ss_pred cccCCCcEEEeecCccccccc
Confidence 6788999999999986543
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-22 Score=218.34 Aligned_cols=148 Identities=17% Similarity=0.174 Sum_probs=126.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC----CCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES----SPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~----~~~~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||+|++... ......+.+.+|++++.+++||||+++++++... .....++|
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~---~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LV 96 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSC---CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEE
Confidence 88999999999999986 6889999987432 2234456799999999999999999999997651 12267999
Q ss_pred EeeCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eeeCCCchhhh
Q 009972 439 FDYASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKVSPLCLSFL 514 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~---~kl~DfGla~~ 514 (521)
|||+++|+|.+++.... ...+++..+..|+.+++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 97 mEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 97 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp EECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 99999999999997533 23589999999999999999999999 9999999999999997664 99999999987
Q ss_pred ccc
Q 009972 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
+..
T Consensus 174 ~~~ 176 (676)
T 3qa8_A 174 LDQ 176 (676)
T ss_dssp TTS
T ss_pred ccc
Confidence 654
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-22 Score=209.46 Aligned_cols=139 Identities=15% Similarity=0.193 Sum_probs=114.5
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||+||.....+++.||||++..... ..+.+|+.++.++ +|||||++++++.+.. ..++||||+
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv~E~~ 100 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-------SFADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIAIELC 100 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTE-------EECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-------HHHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEEEECC
Confidence 78999999996655556889999999843221 1256899999999 8999999999998877 889999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-----CCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-----~~~~kl~DfGla~~~~ 516 (521)
+ |+|.+++..... ...+..+..++.||+.||+|||+. +|+||||||+|||++. +..+||+|||+|+.+.
T Consensus 101 ~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 101 A-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp S-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred C-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 7 599999975432 345556789999999999999999 9999999999999943 3468899999998764
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-22 Score=195.36 Aligned_cols=134 Identities=10% Similarity=0.051 Sum_probs=109.1
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc--------------chhhHHHHHHHHHHHhccCCCccceeeeEeec
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW--------------TGYLELYFQREVADLARINHENTGKLLGYCRE 429 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~--------------~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 429 (521)
+.||+|+||.||+|+..+|+.||+|.+....... .......+.+|+.++.+++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 7899999999999999778999999985432110 0123567999999999999 5 777776654
Q ss_pred CCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCC
Q 009972 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 430 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~Df 509 (521)
. ..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||++ ++.+||+||
T Consensus 173 ~---~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 173 E---GNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp E---TTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCC
T ss_pred c---ceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEEC
Confidence 3 5799999999999998 531 12347999999999999999 999999999999999 999999999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+|+...
T Consensus 237 G~a~~~~ 243 (282)
T 1zar_A 237 PQSVEVG 243 (282)
T ss_dssp TTCEETT
T ss_pred CCCeECC
Confidence 9998654
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.8e-22 Score=201.76 Aligned_cols=146 Identities=16% Similarity=0.144 Sum_probs=122.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-----------CCccceeeeEeecCC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----------HENTGKLLGYCRESS 431 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~~~~ 431 (521)
+.||+|+||+||+|+.. +++.||+|.+... ....+.+.+|+.++.+++ ||||+++++++...+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~ 99 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG 99 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccC
Confidence 78999999999999985 6889999998432 223456889999999886 899999999987532
Q ss_pred --CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec------CCCC
Q 009972 432 --PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT------EDFS 503 (521)
Q Consensus 432 --~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld------~~~~ 503 (521)
....++||||+ +++|.+++.......+++..+..|+.|++.||+|||+.+ +|+||||||+|||++ .++.
T Consensus 100 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 100 PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEE
T ss_pred CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcce
Confidence 22579999999 889999997655556999999999999999999999853 899999999999994 4458
Q ss_pred eeeCCCchhhhccc
Q 009972 504 PKVSPLCLSFLLVS 517 (521)
Q Consensus 504 ~kl~DfGla~~~~~ 517 (521)
+||+|||+++.+..
T Consensus 177 ~kl~Dfg~a~~~~~ 190 (373)
T 1q8y_A 177 IKIADLGNACWYDE 190 (373)
T ss_dssp EEECCCTTCEETTB
T ss_pred EEEcccccccccCC
Confidence 99999999987654
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=183.79 Aligned_cols=177 Identities=22% Similarity=0.214 Sum_probs=150.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCC-CCCCCCcccCCCcCCceE
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ-LTGPIPPEIGNLTGLVKI 147 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L 147 (521)
..+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|. ++...|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3578999999999999877889999999999999999998889999999999999999997 876668899999999999
Q ss_pred ecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccCCc
Q 009972 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (521)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~ 222 (521)
+|++|++++..|..|.++++|++|++++|++++..+..... ..++..+++++|.+++ +..+++|+.|++++|.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD--LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhcc--CCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 99999999888888999999999999999998544332221 3578889999998875 4557899999999999
Q ss_pred cccCCccccc---cCCCcccCCCccCCC
Q 009972 223 FVGSIPKCLE---YLPSTSFQGNCLQNK 247 (521)
Q Consensus 223 l~g~ip~~l~---~l~~l~~~~N~l~~~ 247 (521)
+++..|..+. +|+.+++++|.+...
T Consensus 189 l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 216 (285)
T 1ozn_A 189 VAHVHPHAFRDLGRLMTLYLFANNLSAL 216 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred ccccCHhHccCcccccEeeCCCCcCCcC
Confidence 9988887764 566788899977764
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=176.29 Aligned_cols=153 Identities=27% Similarity=0.335 Sum_probs=128.5
Q ss_pred CCCCCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEE
Q 009972 54 DADPCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124 (521)
Q Consensus 54 ~~~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (521)
....|+|++|.|... ..+++.|+|++|.+++..|..|..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 356899999999741 34688999999999998888899999999999999999876667788999999999
Q ss_pred ccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCC
Q 009972 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (521)
Q Consensus 125 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l 204 (521)
|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++ +|..
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~-~~~~------------------- 153 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS-IPHG------------------- 153 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCC-CCTT-------------------
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCc-cCHH-------------------
Confidence 9999999776777889999999999999999 788889999999999999999984 4431
Q ss_pred CCcccCCCCCEEeccCCccccCCc
Q 009972 205 TGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 205 ~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
.+..+++|+.|++++|.+++..+
T Consensus 154 -~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 154 -AFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp -TTTTCTTCCEEECTTSCBCTTBG
T ss_pred -HHhCCCCCCEEEeeCCCccCCcc
Confidence 23457889999999999986654
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=183.18 Aligned_cols=179 Identities=19% Similarity=0.154 Sum_probs=154.4
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCc-ccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceE
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 147 (521)
..+++.|+|++|.+++..|..|..+++|++|+|++|. +....|..|..+++|++|+|++|++++..|..+.++++|++|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 3589999999999999889999999999999999997 887778899999999999999999998889999999999999
Q ss_pred ecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccCCc
Q 009972 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (521)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~ 222 (521)
+|++|++++..+..|+.+++|++|+|++|++++..+..... ..++..+++++|.+++ +..+++|+.|++++|+
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRG--LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcC--ccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 99999999777777999999999999999999544432222 3578899999998875 4568899999999999
Q ss_pred cccCCcccc---ccCCCcccCCCccCCCCC
Q 009972 223 FVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 223 l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
+++..|..+ .+++.+++++|++.+.++
T Consensus 213 l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 213 LSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp CSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 997666544 556778999998887654
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-21 Score=198.06 Aligned_cols=149 Identities=12% Similarity=0.075 Sum_probs=111.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC-CccceeeeE---------------
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGY--------------- 426 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~--------------- 426 (521)
++||+|+||+||+|++. +|+.||||++..... ......+.|.+|+.+++.++| +|......+
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCC-ccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 78999999999999975 789999998753322 122335679999999999987 332211111
Q ss_pred ------eecCC---CCceEEEEeeCCCCChhhhhh-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 009972 427 ------CRESS---PFTRMLVFDYASNGTLYEHLH-----YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (521)
Q Consensus 427 ------~~~~~---~~~~~lv~ey~~~g~L~~~l~-----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk 492 (521)
+.... ....+++|+++ +|+|.+++. ......++|..++.|+.|+++||+|||+. +|+|||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDiK 238 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLR 238 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcc
Confidence 11110 11346666665 579999884 23344688999999999999999999999 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhccc
Q 009972 493 SSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 493 ~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+|||++.++.+||+|||+++....
T Consensus 239 p~NILl~~~~~~kL~DFG~a~~~~~ 263 (413)
T 3dzo_A 239 PVDIVLDQRGGVFLTGFEHLVRDGA 263 (413)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTE
T ss_pred cceEEEecCCeEEEEeccceeecCC
Confidence 9999999999999999999886553
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=188.44 Aligned_cols=175 Identities=18% Similarity=0.257 Sum_probs=150.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCC---------
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN--------- 140 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--------- 140 (521)
.+++.|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..+..+++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 47999999999999 78999999999999999999999 78999999999999999999999999988765
Q ss_pred CcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCE
Q 009972 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKV 215 (521)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~ 215 (521)
+++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|.... ...++..+++++|++.+ +..+++|+.
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~--~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIH--HLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGG--GCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhc--cCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 999999999999999 899999999999999999999995 554321 23578889999987754 556889999
Q ss_pred EeccCCccccCCccccc---cCCCcccCCCccCCCCCc
Q 009972 216 ADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKDPK 250 (521)
Q Consensus 216 L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~~~~~ 250 (521)
|++++|++.+.+|..+. +|+.+++++|.+.+..|.
T Consensus 258 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~ 295 (328)
T 4fcg_A 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPS 295 (328)
T ss_dssp EECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCG
T ss_pred EECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccH
Confidence 99999999999997765 456678999877765443
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-20 Score=176.42 Aligned_cols=156 Identities=25% Similarity=0.237 Sum_probs=138.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 47899999999999988889999999999999999999988888999999999999999999877788999999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccCCccc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~ 224 (521)
++|++++..+..|..+++|++|+|++|++++..+..... ..++..+++++|.++++ ..+++|+.|++++|.++
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK--LTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCc--CcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 999999777777899999999999999999544432222 35788999999998764 45789999999999998
Q ss_pred cCC
Q 009972 225 GSI 227 (521)
Q Consensus 225 g~i 227 (521)
+..
T Consensus 193 c~~ 195 (251)
T 3m19_A 193 CSR 195 (251)
T ss_dssp TTS
T ss_pred CCc
Confidence 763
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-20 Score=181.31 Aligned_cols=173 Identities=28% Similarity=0.290 Sum_probs=148.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..++.|+|++|.+++..+..|..+++|++|+|++|.+++..+. ..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 5789999999999998889999999999999999999965443 88999999999999998 78999999999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccCCccc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~ 224 (521)
++|++++..|..|.++++|++|+|++|++++ +|...+. ...++..+++++|+++.+ ..+++|+.|+|++|+++
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGLLT-PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCC-CCTTTTT-TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCc-cChhhcc-cccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 9999998777889999999999999999994 4543322 135788999999999864 45789999999999999
Q ss_pred cCCccccc---cCCCcccCCCccCCCC
Q 009972 225 GSIPKCLE---YLPSTSFQGNCLQNKD 248 (521)
Q Consensus 225 g~ip~~l~---~l~~l~~~~N~l~~~~ 248 (521)
.+|..+. .++.+.+.+|++.+.|
T Consensus 186 -~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 186 -TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp -CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred -ccChhhcccccCCeEEeCCCCccCcC
Confidence 7776653 4677889999888765
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-20 Score=185.30 Aligned_cols=189 Identities=19% Similarity=0.193 Sum_probs=149.3
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccc--cCCcccCCCCCCcEEEc
Q 009972 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDL 125 (521)
Q Consensus 57 ~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L 125 (521)
.|.|.++.|... ..+++.|+|++|.++...+..|..+++|++|+|++|.++. ..|..+..+++|++|+|
T Consensus 6 ~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 478999999742 2479999999999997555568999999999999999983 34667778899999999
Q ss_pred cCCCCCCCCCcccCCCcCCceEecccccCCCCCc-hhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCC
Q 009972 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (521)
Q Consensus 126 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l 204 (521)
++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..... ..++..+++++|.+
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l 162 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG--LSSLEVLKMAGNSF 162 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT--CTTCCEEECTTCEE
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc--CcCCCEEECCCCcc
Confidence 999988 578788889999999999999986544 57888999999999999988666653322 25677888888877
Q ss_pred CC------cccCCCCCEEeccCCccccCCccccc---cCCCcccCCCccCCCC
Q 009972 205 TG------LCHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKD 248 (521)
Q Consensus 205 ~~------~~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~~~ 248 (521)
++ +..+++|+.|++++|++++..|..+. +|+.+++++|.+....
T Consensus 163 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 163 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred ccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccC
Confidence 54 45678888999999988877776654 5566788888776653
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.9e-20 Score=191.06 Aligned_cols=186 Identities=19% Similarity=0.181 Sum_probs=137.7
Q ss_pred ccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCC
Q 009972 60 WTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (521)
Q Consensus 60 w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 130 (521)
|..+.|.. ...+++.|+|++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 56677763 134789999999999999899999999999999999999998899999999999999999999
Q ss_pred CCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---
Q 009972 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207 (521)
Q Consensus 131 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~--- 207 (521)
++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+..+.+|...... ..++..+++++|.++++
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~ 214 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG-LFNLKYLNLGMCNIKDMPNL 214 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT-CTTCCEEECTTSCCSSCCCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccC-CCCCCEEECCCCcccccccc
Confidence 97777779999999999999999997666678888888888888855444565533221 23556666666665543
Q ss_pred ccCCCCCEEeccCCccccCCccccc---cCCCcccCCCccCC
Q 009972 208 CHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~ 246 (521)
..+++|+.|+|++|.+++..|..+. +|+.+++++|.+..
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 3345566666666666555554432 23344455554443
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.8e-20 Score=171.62 Aligned_cols=150 Identities=19% Similarity=0.198 Sum_probs=112.6
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCcccCC-ccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccC
Q 009972 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLA-PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
|.|..+.|+.. ...++.|+|++|.|++..+ ..|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 56777777531 2346678888888877644 3467788888888888888877777788888888888888
Q ss_pred CCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc
Q 009972 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~ 207 (521)
|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|. .+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------~~ 149 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG---------------------AF 149 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT---------------------TT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH---------------------Hh
Confidence 888776677778888888888888888877777788888888888888888755453 23
Q ss_pred ccCCCCCEEeccCCccccCCc
Q 009972 208 CHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip 228 (521)
..+++|+.|++++|.+++..+
T Consensus 150 ~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 150 DTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTCTTCCEEECCSCCEECSGG
T ss_pred cCCCCCCEEEecCcCCcCCCc
Confidence 457789999999999986654
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.7e-20 Score=178.70 Aligned_cols=178 Identities=20% Similarity=0.183 Sum_probs=107.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|..+++|++|++++|++++..+..++.+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 35666666666666555555666666666666666666555566666666666666666666555545666666666666
Q ss_pred ccccCCCC-CchhhhCCCCCCEEeCCCCcCCccCCCCCCCccccccc----ccccccCCCCCcc----cCCCCCEEeccC
Q 009972 150 QSNGLTGR-LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIH----GMYASSANLTGLC----HLSQLKVADFSY 220 (521)
Q Consensus 150 s~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~----~l~l~~n~l~~~~----~l~~L~~L~ls~ 220 (521)
++|++++. +|..+.++++|++|+|++|++++..+..... ...+. .+++++|.++++. ...+|+.|++++
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~ 209 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV--LHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDT 209 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH--HHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCS
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhh--hhhccccceeeecCCCcccccCccccCCCcccEEECCC
Confidence 66666642 4666666666666666666666433221110 11122 5667777766432 234688888888
Q ss_pred CccccCCcccc---ccCCCcccCCCccCCCCC
Q 009972 221 NFFVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 221 N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
|++++..+..+ .+++.+++++|++.+.|+
T Consensus 210 n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 210 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CceeecCHhHhcccccccEEEccCCcccccCC
Confidence 88875544433 455667788888877664
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-20 Score=182.86 Aligned_cols=175 Identities=20% Similarity=0.216 Sum_probs=104.1
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCC-cccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
+++.|+|++|.+++ +|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..+..+++|++|+|
T Consensus 79 ~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 79 SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp CCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 45556666666554 44556666666666666666664433 45666666666666666666666666666666666666
Q ss_pred ccccCCC-CCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccCCcc
Q 009972 150 QSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (521)
Q Consensus 150 s~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l 223 (521)
++|.+++ .+|..+..+++|++|+|++|++++..|..... ..++..+++++|.+++ +..+++|+.||+++|++
T Consensus 158 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS--LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcC--CCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 6666664 45666666666666666666666544433221 2355666666666654 23456666666666666
Q ss_pred ccCCccccc----cCCCcccCCCccCCCC
Q 009972 224 VGSIPKCLE----YLPSTSFQGNCLQNKD 248 (521)
Q Consensus 224 ~g~ip~~l~----~l~~l~~~~N~l~~~~ 248 (521)
++..|..+. ++..+++++|++.+.|
T Consensus 236 ~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 236 MTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred cccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 666665443 3445666666665543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=170.58 Aligned_cols=148 Identities=19% Similarity=0.246 Sum_probs=124.6
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccC
Q 009972 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 57 ~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
.|.|..+.|... ..+++.|+|++|.|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 10 ~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 10 TCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred EECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 367888888631 24689999999999987777899999999999999999988899999999999999999
Q ss_pred CCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc
Q 009972 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~ 207 (521)
|+|+...+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|++++..+. .+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------~~ 148 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG---------------------TF 148 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT---------------------TT
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH---------------------HH
Confidence 999965556678899999999999999988888899999999999999999854332 23
Q ss_pred ccCCCCCEEeccCCcccc
Q 009972 208 CHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g 225 (521)
..+++|+.|++++|.+..
T Consensus 149 ~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 149 SPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTCTTCCEEECCSSCEEC
T ss_pred hCCCCCCEEEeCCCCcCC
Confidence 457789999999999874
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.6e-20 Score=178.73 Aligned_cols=176 Identities=20% Similarity=0.178 Sum_probs=147.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46999999999999987779999999999999999999888889999999999999999999888889999999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCcc-CCCCCCCcccccccccccccCCCCCc-----ccCCCCC----EEecc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLK----VADFS 219 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~----~L~ls 219 (521)
++|++++..+..++++++|++|++++|++++. +|..... ..++..+++++|.++++ ..+.+|+ .|+++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls 185 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN--LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGG--CTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhcc--CCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecC
Confidence 99999977776899999999999999999853 4543222 35788889999988753 2334444 89999
Q ss_pred CCccccCCccccc--cCCCcccCCCccCCC
Q 009972 220 YNFFVGSIPKCLE--YLPSTSFQGNCLQNK 247 (521)
Q Consensus 220 ~N~l~g~ip~~l~--~l~~l~~~~N~l~~~ 247 (521)
+|.+++..+..+. +++.+++++|.+...
T Consensus 186 ~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~ 215 (276)
T 2z62_A 186 LNPMNFIQPGAFKEIRLKELALDTNQLKSV 215 (276)
T ss_dssp SSCCCEECTTSSCSCCEEEEECCSSCCSCC
T ss_pred CCcccccCccccCCCcccEEECCCCceeec
Confidence 9999866555443 577888999987764
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=172.95 Aligned_cols=156 Identities=28% Similarity=0.256 Sum_probs=78.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.+++. +.+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 64 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 141 (272)
T 3rfs_A 64 NVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLA 141 (272)
T ss_dssp TCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECC
Confidence 455555555555442 244555555555555555554444444555555555555555554444444555555555555
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCccc
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC 230 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~~ 230 (521)
+|++++..|..|+.+++|++|++++|++++..|.. +..+++|+.|++++|++++..|..
T Consensus 142 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------------------~~~l~~L~~L~L~~N~l~~~~~~~ 200 (272)
T 3rfs_A 142 HNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGV---------------------FDKLTQLKDLRLYQNQLKSVPDGV 200 (272)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT---------------------TTTCTTCCEEECCSSCCSCCCTTT
T ss_pred CCccCccCHHHhccCccCCEEECCCCCcCccCHHH---------------------hcCCccCCEEECCCCcCCccCHHH
Confidence 55555444444455555555555555554322211 233556666666666666555433
Q ss_pred c---ccCCCcccCCCccCCCCC
Q 009972 231 L---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 231 l---~~l~~l~~~~N~l~~~~~ 249 (521)
+ .+++.+++.+|++.+.++
T Consensus 201 ~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 201 FDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp TTTCTTCCEEECCSSCBCCCTT
T ss_pred HhCCcCCCEEEccCCCccccCc
Confidence 3 344455566665555443
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-20 Score=187.36 Aligned_cols=174 Identities=22% Similarity=0.202 Sum_probs=118.6
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCcccCCcccc-CCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccC
Q 009972 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
|.+..+.|... ...++.|+|++|.|++..+..+. .+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 55666666521 23466777777777776666665 777777777777777766666677777777777777
Q ss_pred CCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc
Q 009972 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~ 207 (521)
|+|++..+..|.++++|+.|+|++|++++..|..|.++++|++|+|++|+|+ .+|.... .++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~-----------------~~~ 159 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELI-----------------KDG 159 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGT-----------------C--
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHh-----------------cCc
Confidence 7777555566777777777777777777666677777777777777777776 3443111 112
Q ss_pred ccCCCCCEEeccCCccccCCccccccC-----CCcccCCCccCCCCC
Q 009972 208 CHLSQLKVADFSYNFFVGSIPKCLEYL-----PSTSFQGNCLQNKDP 249 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~~l-----~~l~~~~N~l~~~~~ 249 (521)
..+++|+.|||++|+|++..+..+..+ ..+++.+|++.+.|.
T Consensus 160 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 160 NKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp --CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred ccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 457899999999999995544556555 458999999988764
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3e-20 Score=193.72 Aligned_cols=150 Identities=22% Similarity=0.219 Sum_probs=120.3
Q ss_pred CCCCccc--eeeCCC--------CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccC-CcccCCCCCCcEEE
Q 009972 56 DPCHWTG--IACSDA--------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILD 124 (521)
Q Consensus 56 ~~c~w~g--v~C~~~--------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 124 (521)
..|.|.+ +.|... ..+++.|+|++|.+++..|..|+.+++|++|+|++|.+.+.+ |..|..+++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3566655 777632 257899999999999988889999999999999999987555 56789999999999
Q ss_pred ccCCCCCCCCCcccCCCcCCceEecccccCCCCCchh--hhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccC
Q 009972 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSA 202 (521)
Q Consensus 125 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n 202 (521)
|++|++++..|..|+++++|++|+|++|++++.+|.. |.++++|++|+|++|++++..|..... ...+++.+++++|
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-~l~~L~~L~L~~n 164 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL-NMRRFHVLDLTFN 164 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG-GCTTCCEEECTTC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccC-CCCcccEEeCCCC
Confidence 9999999888999999999999999999998766665 888999999999999998766653221 1246677777777
Q ss_pred CCCC
Q 009972 203 NLTG 206 (521)
Q Consensus 203 ~l~~ 206 (521)
.+++
T Consensus 165 ~l~~ 168 (455)
T 3v47_A 165 KVKS 168 (455)
T ss_dssp CBSC
T ss_pred cccc
Confidence 7654
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.81 E-value=6.4e-20 Score=178.05 Aligned_cols=163 Identities=19% Similarity=0.221 Sum_probs=132.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..+..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 46899999999999998888899999999999999999988888899999999999999999987777889999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCc
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|++|++++..|..|+.+++|++|++++|++++..|..... ..++..+++++|.+.+ .+++|+.++++.|.++|.+|
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~l~~N~~~~--~~~~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDR--LTSLQYIWLHDNPWDC--TCPGIRYLSEWINKHSGVVR 239 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT--CTTCCEEECCSSCBCC--CTTTTHHHHHHHHHTGGGBB
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhC--CcCCCEEEccCCCccc--cCcHHHHHHHHHHhCCCccc
Confidence 9999999877777899999999999999999655532211 2355566666665543 23456666666666666666
Q ss_pred cccccCC
Q 009972 229 KCLEYLP 235 (521)
Q Consensus 229 ~~l~~l~ 235 (521)
..++.+.
T Consensus 240 ~~~~~~~ 246 (272)
T 3rfs_A 240 NSAGSVA 246 (272)
T ss_dssp CTTSCBC
T ss_pred CcccccC
Confidence 6555443
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=186.37 Aligned_cols=186 Identities=19% Similarity=0.200 Sum_probs=136.2
Q ss_pred ccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCC
Q 009972 60 WTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (521)
Q Consensus 60 w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 130 (521)
|..|.|.. ....++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 56777863 134688999999999998889999999999999999999988888999999999999999999
Q ss_pred CCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---
Q 009972 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207 (521)
Q Consensus 131 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~--- 207 (521)
++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+..+.+|...... ..++..+++++|.++.+
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~ 203 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEG-LSNLRYLNLAMCNLREIPNL 203 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT-CSSCCEEECTTSCCSSCCCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhc-ccccCeecCCCCcCcccccc
Confidence 96666789999999999999999997666678888888888888855444565533221 23556666666665543
Q ss_pred ccCCCCCEEeccCCccccCCccccc---cCCCcccCCCccCC
Q 009972 208 CHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~ 246 (521)
..+++|+.|+|++|++++..|..+. +|+.+++++|.+..
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV 245 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE
Confidence 2345566666666666555444432 33344455554443
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.6e-20 Score=176.99 Aligned_cols=139 Identities=14% Similarity=0.165 Sum_probs=104.8
Q ss_pred hhhCcCCCeeEEEEEe-CCCCE--EEEEEeeeecccc--------------------chhhHHHHHHHHHHHhccCCCcc
Q 009972 364 NIIGSSPDSLVYKGTM-KGGPE--IAVISLCIKEEHW--------------------TGYLELYFQREVADLARINHENT 420 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~-~~~~~--vavk~~~~~~~~~--------------------~~~~~~~~~~E~~~l~~l~H~ni 420 (521)
+.||+|+||.||+|.. .+|+. ||||.+....... .......+.+|+.++.+++|+++
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 132 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGV 132 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6899999999999998 68888 9999864321110 01123468899999999998865
Q ss_pred ceeeeEeecCCCCceEEEEeeCCC-C----ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeeecCCCCC
Q 009972 421 GKLLGYCRESSPFTRMLVFDYASN-G----TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH-TELGPPFTISELNSS 494 (521)
Q Consensus 421 v~l~g~~~~~~~~~~~lv~ey~~~-g----~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~dlk~~ 494 (521)
....-+.. . ..++||||+.+ | +|.++... .++.....++.+++.||.||| +. +|+||||||+
T Consensus 133 ~~p~~~~~--~--~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~ 200 (258)
T 1zth_A 133 SVPQPYTY--M--KNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEY 200 (258)
T ss_dssp CCCCEEEE--E--TTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTT
T ss_pred CCCeEEEc--C--CCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHH
Confidence 32222222 2 46899999952 4 66665431 234567889999999999999 87 9999999999
Q ss_pred CeeecCCCCeeeCCCchhhhcc
Q 009972 495 AVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 495 NILld~~~~~kl~DfGla~~~~ 516 (521)
|||+++ .++|+|||+|....
T Consensus 201 NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 201 NIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SEEESS--SEEECCCTTCEETT
T ss_pred HEEEcC--cEEEEECcccccCC
Confidence 999998 99999999998654
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-19 Score=195.42 Aligned_cols=175 Identities=19% Similarity=0.172 Sum_probs=114.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.|++..|..|+++++|++|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 46677777777777666677777777777777777777667677777777777777777775444446777777777777
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCc------------------------------------ccccc
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG------------------------------------YTANI 194 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~------------------------------------~~~~l 194 (521)
+|.+++..|..|+++++|++|+|++|.+++. +...... ...++
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L 234 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVEL 234 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-CGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCC
T ss_pred CCcCCCCChhhhhcCCcCcEEECcCCCCCCc-ChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCC
Confidence 7777777777777777777777777777643 2110000 00123
Q ss_pred cccccccCCCCC---cccCCCCCEEeccCCccccCCccccc---cCCCcccCCCccCC
Q 009972 195 HGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 195 ~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~ 246 (521)
..+++++|.+++ +..+++|+.|+|++|.+++.+|..+. +|..|++++|.+..
T Consensus 235 ~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 292 (597)
T 3oja_B 235 TILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA 292 (597)
T ss_dssp CEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE
T ss_pred CEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC
Confidence 344444444443 34466777777777777776666553 34556677776654
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-20 Score=185.64 Aligned_cols=175 Identities=19% Similarity=0.209 Sum_probs=110.3
Q ss_pred CCEEEEEecCCCCcccCCccc--cCCCCCCEEEcCCCcccccCCcccCCC-----CCCcEEEccCCCCCCCCCcccCCCc
Q 009972 70 DRVLKINISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIPKELGLL-----KRLKILDLGTNQLTGPIPPEIGNLT 142 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~ 142 (521)
.+++.|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 356677777777777666665 6677777777777777765 6666555 6777777777777766666777777
Q ss_pred CCceEecccccCCCC--Cchhh--hCCCCCCEEeCCCCcCCc--cCCCCCCCcccccccccccccCCCCCcc------cC
Q 009972 143 GLVKINLQSNGLTGR--LPAEL--GNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTGLC------HL 210 (521)
Q Consensus 143 ~L~~L~Ls~N~l~g~--~p~~~--~~l~~L~~L~Ls~N~l~g--~~p~~~~~~~~~~l~~l~l~~n~l~~~~------~l 210 (521)
+|++|+|++|++++. +|..+ ..+++|++|+|++|++++ .++.... ....++..+++++|.+++.. .+
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALA-AARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHH-HTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHH-hcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 777777777776654 23344 667777777777777762 1111100 00135666677777665522 24
Q ss_pred CCCCEEeccCCccccCCcccc-ccCCCcccCCCccCCC
Q 009972 211 SQLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 211 ~~L~~L~ls~N~l~g~ip~~l-~~l~~l~~~~N~l~~~ 247 (521)
++|+.|++++|+++ .+|..+ .+++.+++++|.+++.
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRLDRN 289 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCCCSC
T ss_pred CCCCEEECCCCccC-hhhhhccCCceEEECCCCCCCCC
Confidence 66777777777776 666554 3566677777766553
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.80 E-value=7e-19 Score=175.73 Aligned_cols=186 Identities=20% Similarity=0.298 Sum_probs=149.7
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccC
Q 009972 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 57 ~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
.|.|..+.|... ..+++.|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 378999999631 24789999999999998888999999999999999999998899999999999999999
Q ss_pred CCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCc--cCCCCCCCcccccccccccccCCCC
Q 009972 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++. ..|..... . .+..++++.|.++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-l--~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG-L--KLNYLRISEAKLT 185 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS-C--CCSCCBCCSSBCS
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC-C--ccCEEECcCCCCC
Confidence 9999 7787766 899999999999997777779999999999999999963 33433222 1 6777788888777
Q ss_pred Cccc--CCCCCEEeccCCccccCCcccc---ccCCCcccCCCccCCCC
Q 009972 206 GLCH--LSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 206 ~~~~--l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~ 248 (521)
++.. .++|+.|++++|.+++..|..+ .+++.+++++|.+....
T Consensus 186 ~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 233 (332)
T 2ft3_A 186 GIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIE 233 (332)
T ss_dssp SCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCC
T ss_pred ccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCC
Confidence 6532 3577888888888876665554 34566777777766643
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.7e-20 Score=184.78 Aligned_cols=188 Identities=17% Similarity=0.207 Sum_probs=151.9
Q ss_pred CCCCCccceeeCC-----------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEE
Q 009972 55 ADPCHWTGIACSD-----------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKIL 123 (521)
Q Consensus 55 ~~~c~w~gv~C~~-----------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 123 (521)
..+|.|.|+ |+- ...+++.|+|++|.+++..+..+..+++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 457888886 642 12479999999999998777789999999999999999998888899999999999
Q ss_pred EccCCCCCCCCCcccCCCcCCceEecccccCCCCCch--hhhCCCCCCEEeCCCCc-CCccCCCCCCCcccccccccccc
Q 009972 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNR-LQGAVPAGSNSGYTANIHGMYAS 200 (521)
Q Consensus 124 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~~~~~~l~~l~l~ 200 (521)
+|++|++++..+..|+++++|++|+|++|++++ +|. .+.++++|++|++++|+ +++..|..... ..++..++++
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~--l~~L~~L~l~ 182 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG--LTFLEELEID 182 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT--CCEEEEEEEE
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccC--CCCCCEEECC
Confidence 999999996555559999999999999999994 555 78999999999999995 65433333222 3578888999
Q ss_pred cCCCCC-----cccCCCCCEEeccCCccccCCccc----cccCCCcccCCCccCCC
Q 009972 201 SANLTG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 201 ~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~----l~~l~~l~~~~N~l~~~ 247 (521)
+|.+++ +..+++|++|++++|.++ .+|.. +.+++.+++++|.+...
T Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~ 237 (353)
T 2z80_A 183 ASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTF 237 (353)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTC
T ss_pred CCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccc
Confidence 998764 456788999999999986 55543 45677889999987764
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-19 Score=171.47 Aligned_cols=176 Identities=13% Similarity=0.141 Sum_probs=144.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCc-ccccCCcccCCCCCCcEEEccC-CCCCCCCCcccCCCcCCce
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVK 146 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~ 146 (521)
...++.|+|++|++++..+..|..+++|++|+|++|+ +++..+..|..+++|++|+|++ |++++..|..|.++++|++
T Consensus 30 ~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 3479999999999999877789999999999999997 8877777899999999999998 9999776788999999999
Q ss_pred EecccccCCCCCchhhhCCCCCC---EEeCCCC-cCCccCCCCCCCccccccc-ccccccCCCCCcc----cCCCCCEEe
Q 009972 147 INLQSNGLTGRLPAELGNLISLE---ELHLDRN-RLQGAVPAGSNSGYTANIH-GMYASSANLTGLC----HLSQLKVAD 217 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~---~L~Ls~N-~l~g~~p~~~~~~~~~~l~-~l~l~~n~l~~~~----~l~~L~~L~ 217 (521)
|+|++|++++ +|. |..+++|+ +|++++| ++++ +|...... ...+. .+++++|.++.+. ..++|+.|+
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~-i~~~~~~~-l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~ 185 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTS-IPVNAFQG-LCNETLTLKLYNNGFTSVQGYAFNGTKLDAVY 185 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCE-ECTTTTTT-TBSSEEEEECCSCCCCEECTTTTTTCEEEEEE
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhh-cCcccccc-hhcceeEEEcCCCCCcccCHhhcCCCCCCEEE
Confidence 9999999996 776 88999998 9999999 8884 44432221 35677 8999999887543 236899999
Q ss_pred ccCCc-cccCCcccc----ccCCCcccCCCccCCCC
Q 009972 218 FSYNF-FVGSIPKCL----EYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 218 ls~N~-l~g~ip~~l----~~l~~l~~~~N~l~~~~ 248 (521)
+++|+ +++..|..+ .+++.+++++|.+....
T Consensus 186 L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~ 221 (239)
T 2xwt_C 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221 (239)
T ss_dssp CTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCC
T ss_pred cCCCCCcccCCHHHhhccccCCcEEECCCCccccCC
Confidence 99995 885545444 56677889999887653
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-20 Score=201.05 Aligned_cols=176 Identities=18% Similarity=0.303 Sum_probs=155.0
Q ss_pred CCCEEEEEecCCCCccc-----------------CCcccc--CCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCC
Q 009972 69 RDRVLKINISGSSLKGF-----------------LAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~-----------------~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 129 (521)
..+++.|+|++|.++|. +|+.++ .+++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 35899999999999996 999999 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCcccCCC------cCCceEecccccCCCCCch--hhhCCCCCCEEeCCCCcCCccCCCCCCCccccccccccc
Q 009972 130 -LTG-PIPPEIGNL------TGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199 (521)
Q Consensus 130 -l~g-~~p~~~~~l------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l 199 (521)
++| .+|..++.+ ++|++|+|++|+++ .+|. .++++++|++|++++|+++|.+| .. ....++..+++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~--~~l~~L~~L~L 360 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF--GSEIKLASLNL 360 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC--EEEEEESEEEC
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh--CCCCCCCEEEC
Confidence 998 899999887 99999999999999 8998 99999999999999999999999 32 22457888899
Q ss_pred ccCCCCC----cccCCC-CCEEeccCCccccCCccccc-----cCCCcccCCCccCCCCC
Q 009972 200 SSANLTG----LCHLSQ-LKVADFSYNFFVGSIPKCLE-----YLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 200 ~~n~l~~----~~~l~~-L~~L~ls~N~l~g~ip~~l~-----~l~~l~~~~N~l~~~~~ 249 (521)
++|.++. +..+++ |+.|++++|+++ .+|..+. +++.+++++|.+.+..|
T Consensus 361 ~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p 419 (636)
T 4eco_A 361 AYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDG 419 (636)
T ss_dssp CSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTT
T ss_pred CCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcch
Confidence 9998764 445777 999999999999 8887654 46678889998877544
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.6e-20 Score=195.33 Aligned_cols=188 Identities=18% Similarity=0.212 Sum_probs=151.4
Q ss_pred CCCccceeeCCC-----------CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEc
Q 009972 57 PCHWTGIACSDA-----------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL 125 (521)
Q Consensus 57 ~c~w~gv~C~~~-----------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 125 (521)
.|.|.|+ |+.. ..+++.|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5888887 7621 247999999999999988899999999999999999999988899999999999999
Q ss_pred cCCCCCCCCCcccCCCcCCceEecccccCCC-CCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCC
Q 009972 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (521)
Q Consensus 126 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l 204 (521)
++|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|++++|++.+.+|...... ..+++.+++++|.+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~-l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG-LTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT-CCEEEEEEEEETTC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhc-ccccCeeeccCCcc
Confidence 9999998777789999999999999999996 467789999999999999999666777533322 35778888888887
Q ss_pred CC-----cccCCCCCEEeccCCccccCCccc----cccCCCcccCCCccCCC
Q 009972 205 TG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 205 ~~-----~~~l~~L~~L~ls~N~l~g~ip~~----l~~l~~l~~~~N~l~~~ 247 (521)
++ +..+++|+.|++++|.+. .+|.. +.+++.+++++|.+.+.
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred cccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 64 445666777777777664 34432 35566667777766553
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-19 Score=183.12 Aligned_cols=109 Identities=18% Similarity=0.184 Sum_probs=51.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|++++|.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 34445555555544333334445555555555555544444445555555555555555544444444445555555555
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
+|+++...+..|.++++|++|++++|+++
T Consensus 126 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~ 154 (390)
T 3o6n_A 126 RNDLSSLPRGIFHNTPKLTTLSMSNNNLE 154 (390)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCccCcCCHHHhcCCCCCcEEECCCCccC
Confidence 55544222222344445555555555444
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=180.11 Aligned_cols=175 Identities=17% Similarity=0.167 Sum_probs=112.5
Q ss_pred CEEEEEecCCCCcccCCccc--cCCCCCCEEEcCCCcccccCC----cccCCCCCCcEEEccCCCCCCCCCcccCCCcCC
Q 009972 71 RVLKINISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIP----KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 144 (521)
+++.|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|+.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47788888888887777777 777778888888877776544 334567777777777777777667777777777
Q ss_pred ceEecccccCCCC--Cc--hhhhCCCCCCEEeCCCCcCCccCCCCCC--CcccccccccccccCCCCCc-----ccC---
Q 009972 145 VKINLQSNGLTGR--LP--AELGNLISLEELHLDRNRLQGAVPAGSN--SGYTANIHGMYASSANLTGL-----CHL--- 210 (521)
Q Consensus 145 ~~L~Ls~N~l~g~--~p--~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~~~~~l~~l~l~~n~l~~~-----~~l--- 210 (521)
++|+|++|++.+. ++ ..++.+++|++|+|++|+++ .+|.... ......+..+++++|.+++. ..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 7777777776542 22 12356677777777777775 2221000 00113566667777766553 222
Q ss_pred CCCCEEeccCCccccCCcccc-ccCCCcccCCCccCCC
Q 009972 211 SQLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 211 ~~L~~L~ls~N~l~g~ip~~l-~~l~~l~~~~N~l~~~ 247 (521)
++|++|++++|+++ .+|..+ .+|+.+++++|.+.+.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~~ 287 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNRA 287 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCSC
T ss_pred CcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCCC
Confidence 46777777777776 555543 4666677777766653
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.6e-19 Score=165.77 Aligned_cols=153 Identities=20% Similarity=0.235 Sum_probs=132.4
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCC-cccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccc
Q 009972 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
+.+++++|.++. +|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 379999999987 676554 457999999999998755 4589999999999999999988888999999999999999
Q ss_pred ccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCcccc
Q 009972 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCL 231 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~~l 231 (521)
|++++..|..|.++++|++|+|++|++++..|. .+..+++|+.|+|++|++++..|..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~~ 149 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGND---------------------SFIGLSSVRLLSLYDNQITTVAPGAF 149 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTT---------------------SSTTCTTCSEEECTTSCCCCBCTTTT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHh---------------------HcCCCccCCEEECCCCcCCEECHHHh
Confidence 999988888899999999999999999966554 24457889999999999998888776
Q ss_pred c---cCCCcccCCCccCCCCC
Q 009972 232 E---YLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 232 ~---~l~~l~~~~N~l~~~~~ 249 (521)
. ++..+++++|++.+.|+
T Consensus 150 ~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 150 DTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTCTTCCEEECCSCCEECSGG
T ss_pred cCCCCCCEEEecCcCCcCCCc
Confidence 5 55678899999888665
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=8.1e-19 Score=175.08 Aligned_cols=185 Identities=19% Similarity=0.249 Sum_probs=133.9
Q ss_pred CCCccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccC
Q 009972 57 PCHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 57 ~c~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
.|.|+.+.|.. ....++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 46899999863 134789999999999998777899999999999999999988899999999999999999
Q ss_pred CCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCc--cCCCCCCCcccccccccccccCCCC
Q 009972 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++. ..+.... ...++..+++++|.++
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ--GMKKLSYIRIADTNIT 184 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGG--GCTTCCEEECCSSCCC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhcc--CCCCcCEEECCCCccc
Confidence 9998 6777665 788888888888887777778888888888888888753 2232111 1234555566666555
Q ss_pred Cccc--CCCCCEEeccCCccccCCccccc---cCCCcccCCCccCC
Q 009972 206 GLCH--LSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 206 ~~~~--l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~ 246 (521)
.+.. .++|+.|++++|.+++..|..+. +++.+++++|.+..
T Consensus 185 ~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 185 TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred cCCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 4321 24556666666665554444432 33445555555443
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.2e-19 Score=165.46 Aligned_cols=153 Identities=20% Similarity=0.230 Sum_probs=131.7
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccc
Q 009972 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (521)
..+++++++++. +|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 368999999987 566554 78999999999999888889999999999999999999888999999999999999999
Q ss_pred cCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCccccc
Q 009972 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLE 232 (521)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~~l~ 232 (521)
+|++..+..|..+++|++|+|++|++++..|. .+..+++|+.|+|++|++++..|..+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 149 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVD---------------------AFQDLHNLNLLSLYDNKLQTIAKGTFS 149 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT---------------------TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHH---------------------HcCCCCCCCEEECCCCcCCEECHHHHh
Confidence 99966556689999999999999999965553 244678899999999999977766554
Q ss_pred ---cCCCcccCCCccCCCCC
Q 009972 233 ---YLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 233 ---~l~~l~~~~N~l~~~~~ 249 (521)
+++.+++++|++.+.|.
T Consensus 150 ~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp TCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCEEEeCCCCcCCCCc
Confidence 56678899998887654
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-19 Score=194.48 Aligned_cols=111 Identities=21% Similarity=0.166 Sum_probs=98.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..++.|||++|.|++..+.+|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47889999999999877788999999999999999999888888999999999999999998766678899999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
++|++++..+..|+++++|++|+|++|++++
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~ 162 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQS 162 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCcccc
Confidence 9999997666678999999999999999874
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.5e-20 Score=180.48 Aligned_cols=175 Identities=21% Similarity=0.252 Sum_probs=144.6
Q ss_pred CCCEEEEEecCCCCcccCCccccCC-----CCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCC--CCccc--C
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLL-----TYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP--IPPEI--G 139 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~--~ 139 (521)
..+++.|+|++|.+++. |..++.+ ++|++|+|++|++.+..|..|+.+++|++|+|++|++.+. +|..+ +
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 45899999999999997 8888877 9999999999999998889999999999999999998865 34455 8
Q ss_pred CCcCCceEecccccCCC--CCc-hhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCccc--CCCCC
Q 009972 140 NLTGLVKINLQSNGLTG--RLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH--LSQLK 214 (521)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g--~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~--l~~L~ 214 (521)
.+++|++|+|++|++++ .++ ..+.++++|++|+|++|++++.+|..... ...++..+++++|.++.+.. .++|+
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~l~~L~~L~Ls~N~l~~ip~~~~~~L~ 277 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD-WPSQLNSLNLSFTGLKQVPKGLPAKLS 277 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC-CCTTCCEEECTTSCCSSCCSSCCSEEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhh-hcCCCCEEECCCCccChhhhhccCCce
Confidence 99999999999999993 233 34568899999999999999877543322 23678999999999986543 26899
Q ss_pred EEeccCCccccCCcc--ccccCCCcccCCCccCC
Q 009972 215 VADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 215 ~L~ls~N~l~g~ip~--~l~~l~~l~~~~N~l~~ 246 (521)
.||+++|++++. |. .+.+++.+++++|++.+
T Consensus 278 ~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 278 VLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTC
T ss_pred EEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCC
Confidence 999999999965 65 23456678899998775
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-19 Score=184.11 Aligned_cols=103 Identities=19% Similarity=0.246 Sum_probs=57.8
Q ss_pred CCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCEEe
Q 009972 143 GLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVAD 217 (521)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ 217 (521)
+|+.|+|++|++++.+|..|+.+++|++|+|++|++++..|..... ...+..+++++|.+++ +..+++|+.|+
T Consensus 276 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG--LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp CCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred CceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcC--cccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 4455555555555556666777777777777777776555543221 2355556666666543 23455666666
Q ss_pred ccCCccccCCcccc---ccCCCcccCCCccCCC
Q 009972 218 FSYNFFVGSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 218 ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
+++|++++..|..+ .+|+.+++++|.+...
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCCcccccChhhccccccccEEECCCCccccC
Confidence 66666665555443 3344455666655543
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=183.16 Aligned_cols=182 Identities=18% Similarity=0.184 Sum_probs=148.5
Q ss_pred CccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCC
Q 009972 59 HWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (521)
Q Consensus 59 ~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 129 (521)
.|..|.|.. ...+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 356777753 13478999999999999888999999999999999999999889999999999999999999
Q ss_pred CCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc--
Q 009972 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-- 207 (521)
Q Consensus 130 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-- 207 (521)
+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..... ..++..+++++|.++++
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSG--LNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTT--CTTCCEEEEESCCCSSCCH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccC--CCCCCEEECCCCcCcccCh
Confidence 99666667899999999999999999888999999999999999999999766543322 35778888888887753
Q ss_pred ---ccCCCCCEEeccCCccccCCccccc---cCCCcccCCC
Q 009972 208 ---CHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGN 242 (521)
Q Consensus 208 ---~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N 242 (521)
..+++|+.|++++|.+.+..+..+. +|+.+++++|
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~ 210 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW 210 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECC
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCC
Confidence 4577888888888888765554443 3444555554
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=163.96 Aligned_cols=161 Identities=25% Similarity=0.267 Sum_probs=135.7
Q ss_pred CccceeeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCccc
Q 009972 59 HWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI 138 (521)
Q Consensus 59 ~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 138 (521)
.|..-.|+ .+.++.++++++. +|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+...+..|
T Consensus 13 ~~~~~~Cs-----~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 13 CPSQCSCS-----GTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp CCTTCEEE-----TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCCEEe-----CCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 34556676 2469999999976 565553 899999999999999889999999999999999999986666778
Q ss_pred CCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEec
Q 009972 139 GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADF 218 (521)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~l 218 (521)
..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|.. +..+++|+.|+|
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---------------------~~~l~~L~~L~L 142 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRG---------------------IERLTHLTHLAL 142 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTT---------------------GGGCTTCSEEEC
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcc---------------------cccCCCCCEEEC
Confidence 99999999999999999777777899999999999999998 66642 345788999999
Q ss_pred cCCccccCCcccc---ccCCCcccCCCccCCCCC
Q 009972 219 SYNFFVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 219 s~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
++|+|++..+..+ .++..+++.+|++.+.|+
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999996555544 566778899999988764
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=181.65 Aligned_cols=180 Identities=14% Similarity=0.154 Sum_probs=120.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++...+..|.++++|+.|+
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 35789999999999988888899999999999999999977777788999999999999998865555666677777777
Q ss_pred cccccCCCCCc-hhhhCCCCCCEEeCCCCcCCccCCCCCCC---------------------cccccccccccccCCCCC
Q 009972 149 LQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNS---------------------GYTANIHGMYASSANLTG 206 (521)
Q Consensus 149 Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~---------------------~~~~~l~~l~l~~n~l~~ 206 (521)
|++|+..+.+| ..|.++++|++|+|++|++++ +|..... ....++..+++++|.+++
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 76633222333 345566666666666666652 3321100 001244555666665543
Q ss_pred -----cccCCCCCEEeccCCccccCCcccc---ccCCCcccCCCccCCCCC
Q 009972 207 -----LCHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 207 -----~~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
+..+++|+.|+|++|++++..+..+ .++..+++++|++.+.|.
T Consensus 257 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 257 IERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred ECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 3345677777777777774444433 445566777777777664
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=181.02 Aligned_cols=178 Identities=15% Similarity=0.143 Sum_probs=113.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++...+..|.++++|+.|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 46888888888888877778888888888888888888766667888888888888888887555556666666666666
Q ss_pred ccccCCCCCc-hhhhCCCCCCEEeCCCCcCC----------------------ccCCCCCCCcccccccccccccCCCCC
Q 009972 150 QSNGLTGRLP-AELGNLISLEELHLDRNRLQ----------------------GAVPAGSNSGYTANIHGMYASSANLTG 206 (521)
Q Consensus 150 s~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~----------------------g~~p~~~~~~~~~~l~~l~l~~n~l~~ 206 (521)
++|+..+.+| ..|.++++|++|+|++|+++ +..|..+.. ..++..+++++|.++.
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQG--LMHLQKLWMIQSQIQV 245 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCCTTCSSCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTCCCCE
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCccccccCCCcccCEEECCCCccCccChhhhcc--CccCCEEECCCCceeE
Confidence 6533222232 24555555555555555554 332322111 2345555666665543
Q ss_pred -----cccCCCCCEEeccCCccccCCcccc---ccCCCcccCCCccCCCCC
Q 009972 207 -----LCHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 207 -----~~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
+..+++|+.|+|++|++++..+..+ .+|+.+++++|++.+.|.
T Consensus 246 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 246 IERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp ECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred EChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 3346677777777777775444433 445566777777776653
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5.5e-19 Score=191.04 Aligned_cols=175 Identities=21% Similarity=0.172 Sum_probs=146.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 35799999999999998888999999999999999999998899999999999999999999988899999999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCc-cCCCCCCCcccccccccccccCCCCCcc-----cCCC----CCEEec
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLTGLC-----HLSQ----LKVADF 218 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~~~~~~l~~l~l~~n~l~~~~-----~l~~----L~~L~l 218 (521)
|++|++++..|..|+++++|++|++++|++++ .+|..... ..+++.+++++|.++++. .+++ +..|++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l 188 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSN--LTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGT--CTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEEC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhh--cCCCCEEEccCCcceecChhhhhhhhccccccceeec
Confidence 99999998777889999999999999999985 45654322 357788888888877542 2233 458899
Q ss_pred cCCccccCCccccc--cCCCcccCCCccC
Q 009972 219 SYNFFVGSIPKCLE--YLPSTSFQGNCLQ 245 (521)
Q Consensus 219 s~N~l~g~ip~~l~--~l~~l~~~~N~l~ 245 (521)
++|.+++..+..+. +++.+++++|.+.
T Consensus 189 ~~n~l~~~~~~~~~~~~L~~L~L~~n~~~ 217 (606)
T 3vq2_A 189 SLNPIDFIQDQAFQGIKLHELTLRGNFNS 217 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSC
T ss_pred cCCCcceeCcccccCceeeeeeccCCccc
Confidence 99988865554443 5677788888654
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.7e-18 Score=165.37 Aligned_cols=188 Identities=21% Similarity=0.256 Sum_probs=156.4
Q ss_pred CCCCCccceeeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCC
Q 009972 55 ADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134 (521)
Q Consensus 55 ~~~c~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 134 (521)
.+.|.|.|+.|.- ...++.+++++++++. +|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+++...
T Consensus 2 ~~~C~~~~~~C~c-~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSC-NNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEE-ETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEe-CCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 3689999999863 3456789999999997 676554 68999999999999877789999999999999999999665
Q ss_pred CcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----ccc
Q 009972 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCH 209 (521)
Q Consensus 135 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~ 209 (521)
+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..... ..++..+++++|.+++ +..
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~ 155 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDS--LTKLTYLSLGYNELQSLPKGVFDK 155 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCCCCCTTTTTT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCc--CcCCCEEECCCCcCCccCHhHccC
Confidence 666789999999999999999777778899999999999999999655443221 3578899999999876 456
Q ss_pred CCCCCEEeccCCccccCCcccc---ccCCCcccCCCccCCCC
Q 009972 210 LSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 210 l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~ 248 (521)
+++|+.|++++|.+++..|..+ .+|+.+++++|.+....
T Consensus 156 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 156 LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 8899999999999997666544 56777889999887643
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=8.2e-19 Score=189.68 Aligned_cols=173 Identities=17% Similarity=0.101 Sum_probs=99.8
Q ss_pred CCEEEEEecCCCCccc--CCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCC-cccCCCcCCce
Q 009972 70 DRVLKINISGSSLKGF--LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVK 146 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~--~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 146 (521)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+++ +|..+..+++|++|++++|++++..| ..+.++++|++
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 4667777777777654 25566666666666666666653 44556666666666666666665555 45666666666
Q ss_pred EecccccCCCCCchhhhCCCCCCEEeCCCCcCCcc-CCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccC
Q 009972 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~ 220 (521)
|++++|.+++..|..+.++++|++|++++|++++. +|..... ..++..+++++|.+++ +..+++|+.|++++
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFAN--TTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhcc--CCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 66666666665666666666666666666666552 3332211 2345555555555543 23455566666666
Q ss_pred CccccCCccccc---cCCCcccCCCccC
Q 009972 221 NFFVGSIPKCLE---YLPSTSFQGNCLQ 245 (521)
Q Consensus 221 N~l~g~ip~~l~---~l~~l~~~~N~l~ 245 (521)
|++++.+|..+. +|+.+++++|.++
T Consensus 507 N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp SCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 666555554443 2344555555554
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=187.09 Aligned_cols=154 Identities=19% Similarity=0.183 Sum_probs=119.1
Q ss_pred cCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCC--CCCcccCCCcCCceEecccccCCCCCch-hhhCCCC
Q 009972 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPA-ELGNLIS 167 (521)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~ 167 (521)
..+++|++|+|++|++++.+|..+..+++|++|+|++|++++ .+|..+.++++|+.|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 677888888888888888788888888888888888888885 2346688888888888888888875655 4777888
Q ss_pred CCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc----ccCCCCCEEeccCCccccCCccc-c---ccCCCccc
Q 009972 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKC-L---EYLPSTSF 239 (521)
Q Consensus 168 L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~----~~l~~L~~L~ls~N~l~g~ip~~-l---~~l~~l~~ 239 (521)
|++|++++|++++.+|.... ..+..+++++|.++.+ ..+++|+.|++++|+++ .+|.. + .+++.+++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~----~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP----PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC----TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEEC
T ss_pred CCEEECCCCCCCcchhhhhc----CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEe
Confidence 88888888888877765432 4677888888888754 35788899999999988 56654 4 45566788
Q ss_pred CCCccCCCCC
Q 009972 240 QGNCLQNKDP 249 (521)
Q Consensus 240 ~~N~l~~~~~ 249 (521)
++|++.+.|+
T Consensus 505 ~~N~~~c~c~ 514 (562)
T 3a79_B 505 HDNPWDCTCP 514 (562)
T ss_dssp CSCCBCCCHH
T ss_pred cCCCcCCCcc
Confidence 8898887665
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.9e-19 Score=185.03 Aligned_cols=174 Identities=22% Similarity=0.190 Sum_probs=115.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCc--------------
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-------------- 136 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-------------- 136 (521)
+|+.|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.|++..+.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 45666666666666555566666666666666666655444 55555555555555554421110
Q ss_pred --ccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCC
Q 009972 137 --EIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLS 211 (521)
Q Consensus 137 --~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~ 211 (521)
....+++|+.|+|++|.+++..|..++++++|++|+|++|.+++.+|..... ....+..+++++|.++++ ..++
T Consensus 113 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-~l~~L~~L~Ls~N~l~~~~~~~~l~ 191 (487)
T 3oja_A 113 RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SSDTLEHLNLQYNFIYDVKGQVVFA 191 (487)
T ss_dssp CEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG-GTTTCCEEECTTSCCCEEECCCCCT
T ss_pred CCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh-hCCcccEEecCCCccccccccccCC
Confidence 0123567888888888888877888888888888888888888766654321 125678888888888764 3477
Q ss_pred CCCEEeccCCccccCCcc--ccccCCCcccCCCccCCC
Q 009972 212 QLKVADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 212 ~L~~L~ls~N~l~g~ip~--~l~~l~~l~~~~N~l~~~ 247 (521)
+|+.|+|++|.+++..|. .+.+|..+++++|.+...
T Consensus 192 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~l 229 (487)
T 3oja_A 192 KLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLI 229 (487)
T ss_dssp TCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEE
T ss_pred CCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCccc
Confidence 888888888888865553 234567778888877753
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.4e-19 Score=198.20 Aligned_cols=173 Identities=18% Similarity=0.269 Sum_probs=151.8
Q ss_pred CCCEEEEEecCCCCcc-----------------cCCcccc--CCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCC
Q 009972 69 RDRVLKINISGSSLKG-----------------FLAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~-----------------~~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 129 (521)
..+++.|+|++|.|+| .+|+.++ .+++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 3589999999999999 4899988 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCcccCCCc-------CCceEecccccCCCCCch--hhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccc
Q 009972 130 -LTG-PIPPEIGNLT-------GLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (521)
Q Consensus 130 -l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~ 198 (521)
++| .+|..+++++ +|+.|+|++|+++ .+|. .|+++++|++|+|++|+++ .+|. .. ...++..++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~-~~--~L~~L~~L~ 601 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEA-FG--TNVKLTDLK 601 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCC-CC--TTSEESEEE
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchh-hc--CCCcceEEE
Confidence 998 8998777666 9999999999999 8998 9999999999999999999 8882 22 236788999
Q ss_pred cccCCCCCc----ccCCC-CCEEeccCCccccCCcccccc-----CCCcccCCCccCCC
Q 009972 199 ASSANLTGL----CHLSQ-LKVADFSYNFFVGSIPKCLEY-----LPSTSFQGNCLQNK 247 (521)
Q Consensus 199 l~~n~l~~~----~~l~~-L~~L~ls~N~l~g~ip~~l~~-----l~~l~~~~N~l~~~ 247 (521)
+++|.++.+ ..+++ |+.|++++|.++ .+|..+.. |..+++++|.+.+.
T Consensus 602 Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ 659 (876)
T 4ecn_A 602 LDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSE 659 (876)
T ss_dssp CCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred CcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCc
Confidence 999988753 45777 999999999999 88877643 66788999988764
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=189.47 Aligned_cols=162 Identities=21% Similarity=0.228 Sum_probs=141.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 35799999999999998888899999999999999999999999999999999999999999965556799999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcc-------cCCCCCEEeccCC
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC-------HLSQLKVADFSYN 221 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~-------~l~~L~~L~ls~N 221 (521)
|++|++++..|..|+++++|++|+|++|++++..|..... ..+++.++++.|.++++. .+++|+.|++++|
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ--LENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSC--CTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcc--cccCCEEEccCCcccccCHHHhhccccccccEEECCCC
Confidence 9999999877789999999999999999999776654322 357888999999887643 3578999999999
Q ss_pred ccccCCccccc
Q 009972 222 FFVGSIPKCLE 232 (521)
Q Consensus 222 ~l~g~ip~~l~ 232 (521)
.+++..|..+.
T Consensus 182 ~l~~~~~~~~~ 192 (680)
T 1ziw_A 182 QIKEFSPGCFH 192 (680)
T ss_dssp CCCCBCTTGGG
T ss_pred cccccChhhhh
Confidence 99988776543
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.9e-19 Score=177.35 Aligned_cols=117 Identities=21% Similarity=0.201 Sum_probs=100.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCc--ccCCCcCCce
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP--EIGNLTGLVK 146 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~ 146 (521)
..+++.|+|++|.+++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++ +|. .+..+++|++
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcE
Confidence 3579999999999999888889999999999999999996555558999999999999999984 554 7889999999
Q ss_pred Eecccc-cCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCC
Q 009972 147 INLQSN-GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186 (521)
Q Consensus 147 L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 186 (521)
|++++| .+++..|..|.++++|++|++++|++++..|...
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 194 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSL 194 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHH
Confidence 999998 4776667788999999999999999987766643
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=187.30 Aligned_cols=160 Identities=19% Similarity=0.155 Sum_probs=142.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
...++.|+|++|.+++..|..|+.+++|++|+|++|++.+..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 35799999999999998899999999999999999999999999999999999999999999988899999999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCcc-CCCCCCCcccccccccccccCCCCCc-----ccCCCCC--EEeccC
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLK--VADFSY 220 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~--~L~ls~ 220 (521)
|++|++++..|..++++++|++|++++|++++. +|.... ..++..+++++|.++++ ..+++|+ .|++++
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~ 188 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP---TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNG 188 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC---CTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTT
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccC---CcccCEEEcccCcccccChhhhhhhcccceeEEecCC
Confidence 999999987788899999999999999999963 343322 46888999999998764 4688888 899999
Q ss_pred CccccCCcccc
Q 009972 221 NFFVGSIPKCL 231 (521)
Q Consensus 221 N~l~g~ip~~l 231 (521)
|.+++..|..+
T Consensus 189 n~l~~~~~~~~ 199 (606)
T 3t6q_A 189 NDIAGIEPGAF 199 (606)
T ss_dssp CCCCEECTTTT
T ss_pred CccCccChhHh
Confidence 99998777554
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.2e-19 Score=186.59 Aligned_cols=154 Identities=19% Similarity=0.190 Sum_probs=89.2
Q ss_pred cCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCC--CCCcccCCCcCCceEecccccCCCCCchh-hhCCCC
Q 009972 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLIS 167 (521)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~ 167 (521)
..+++|++|+|++|++++.+|..+..+++|++|+|++|++++ .+|..++.+++|++|+|++|++++.+|.. +..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 455566666666666665556666666666666666666654 34455566666666666666666544443 555566
Q ss_pred CCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc----ccCCCCCEEeccCCccccCCccc-c---ccCCCccc
Q 009972 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKC-L---EYLPSTSF 239 (521)
Q Consensus 168 L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~----~~l~~L~~L~ls~N~l~g~ip~~-l---~~l~~l~~ 239 (521)
|++|++++|++++.+|.... ..+..+++++|.++.+ ..+++|+.|++++|+++ .+|.. + .++..+++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~----~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 475 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP----PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWL 475 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC----TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCEEECcCCCCCcchhhhhc----ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEEC
Confidence 66666666666555544321 3556666666666543 24566677777777666 45543 3 34455666
Q ss_pred CCCccCCCCC
Q 009972 240 QGNCLQNKDP 249 (521)
Q Consensus 240 ~~N~l~~~~~ 249 (521)
++|++.+.|+
T Consensus 476 ~~N~~~c~c~ 485 (520)
T 2z7x_B 476 HTNPWDCSCP 485 (520)
T ss_dssp CSSCBCCCHH
T ss_pred cCCCCcccCC
Confidence 6676666543
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=194.86 Aligned_cols=188 Identities=20% Similarity=0.201 Sum_probs=155.8
Q ss_pred CCCccceeeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccC-CcccCCCCCCcEEEccCCCCCCCCC
Q 009972 57 PCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILDLGTNQLTGPIP 135 (521)
Q Consensus 57 ~c~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (521)
.|.|..|.+ ...+++.|||++|.+++..|..|..+++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|
T Consensus 13 ~~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 456777776 3678999999999999998999999999999999999776666 7889999999999999999998889
Q ss_pred cccCCCcCCceEecccccCCCCCchh--hhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----c
Q 009972 136 PEIGNLTGLVKINLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----C 208 (521)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~ 208 (521)
..|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..|..... ...+++.+++++|.+++. .
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~-~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG-KLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG-TCSSCCEEEEESSCCCCCCSGGGH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHh-hCCCCCEEECCCCcCCeeCHHHcc
Confidence 99999999999999999999877776 899999999999999998765532211 235788889999988653 2
Q ss_pred cC--CCCCEEeccCCccccCCcccccc---------CCCcccCCCccCCC
Q 009972 209 HL--SQLKVADFSYNFFVGSIPKCLEY---------LPSTSFQGNCLQNK 247 (521)
Q Consensus 209 ~l--~~L~~L~ls~N~l~g~ip~~l~~---------l~~l~~~~N~l~~~ 247 (521)
.+ ++|+.|++++|.+.+.+|..+.. ++.+++++|.+...
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~ 219 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVD 219 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTT
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchh
Confidence 33 78999999999998888765443 56778888866544
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.8e-18 Score=185.52 Aligned_cols=180 Identities=19% Similarity=0.192 Sum_probs=133.8
Q ss_pred CCEEEEEecCCCCcccC--CccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcc-cCCCcCCce
Q 009972 70 DRVLKINISGSSLKGFL--APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVK 146 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~ 146 (521)
.+++.|++++|.+++.. +..+..+++|++|+|++|.+.+..|..|..+++|++|++++|++++..|.. +..+++|+.
T Consensus 350 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 429 (606)
T 3t6q_A 350 ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKV 429 (606)
T ss_dssp TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCE
T ss_pred CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCE
Confidence 46888888888888765 667888888888888888888888888888888888888888888766544 788888888
Q ss_pred EecccccCCCCCchhhhCCCCCCEEeCCCCcCCcc-CCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccC
Q 009972 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~ 220 (521)
|+|++|.+++..|..+..+++|++|++++|++++. +|.........++..+++++|.+++ +..+++|+.|++++
T Consensus 430 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 509 (606)
T 3t6q_A 430 LNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSH 509 (606)
T ss_dssp EECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCC
Confidence 88888888877788888888888888888888763 2322112223567777788877764 34567788888888
Q ss_pred CccccCCccccccCC--CcccCCCccCCCCC
Q 009972 221 NFFVGSIPKCLEYLP--STSFQGNCLQNKDP 249 (521)
Q Consensus 221 N~l~g~ip~~l~~l~--~l~~~~N~l~~~~~ 249 (521)
|++++..|..+..++ .+++++|.+....+
T Consensus 510 N~l~~~~~~~l~~l~~L~L~L~~N~l~~~~~ 540 (606)
T 3t6q_A 510 NRLTSSSIEALSHLKGIYLNLASNHISIILP 540 (606)
T ss_dssp SCCCGGGGGGGTTCCSCEEECCSSCCCCCCG
T ss_pred CccCcCChhHhCcccccEEECcCCcccccCH
Confidence 888877777665554 45667777766543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-18 Score=166.11 Aligned_cols=171 Identities=25% Similarity=0.253 Sum_probs=142.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.+++++++++. +|+.+. +.|+.|+|++|++++..|..|..+++|++|+|++|.+++ +|.. +.+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEE
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEE
Confidence 3578999999999986 666554 789999999999999889999999999999999999995 4443 7899999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccCCcc
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF 223 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l 223 (521)
|++|+++ .+|..+..+++|++|+|++|++++..|..+.. ..++..+++++|.++++ ..+++|+.|+|++|++
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRG--LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTT--CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcC--CCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 9999999 78999999999999999999999544433222 35788999999998764 4678999999999999
Q ss_pred ccCCccc---cccCCCcccCCCccCCC
Q 009972 224 VGSIPKC---LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 224 ~g~ip~~---l~~l~~l~~~~N~l~~~ 247 (521)
++..+.. +.+|+.+++++|.+...
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~i 187 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYTI 187 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCcc
Confidence 9544433 45677889999988754
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-18 Score=184.51 Aligned_cols=134 Identities=19% Similarity=0.186 Sum_probs=98.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 35677888888887765566777888888888888888777778888888888888888888777777788888888888
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
++|.+++..+..|+++++|++|+|++|.+++..|..... ..++..+++++|.++
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA--TTSLQNLQLSSNRLT 184 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTT--CTTCCEEECTTSCCS
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhc--CCcCcEEECcCCCCC
Confidence 888888544455678888888888888888665543321 234555555555554
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-18 Score=183.89 Aligned_cols=174 Identities=24% Similarity=0.322 Sum_probs=118.6
Q ss_pred CCCCCCCCCCC-----Cccce-eeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCc
Q 009972 48 SNWNALDADPC-----HWTGI-ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLK 121 (521)
Q Consensus 48 ~~W~~~~~~~c-----~w~gv-~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 121 (521)
.+|.. +.+|| .|.|+ .|. ..+++.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+| ..+++|+
T Consensus 34 ~~W~~-~~~~~~~~~~~~~~l~~C~--~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 34 DKWEK-QALPGENRNEAVSLLKECL--INQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHT-TCCTTCCHHHHHHHHHHHH--HTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHhc-cCCccccccchhhhccccc--cCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCC
Confidence 45644 45678 79999 786 3578999999999988 67666 378889999988888 566 4578888
Q ss_pred EEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCccccccccccccc
Q 009972 122 ILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS 201 (521)
Q Consensus 122 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~ 201 (521)
+|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|.. ..++..+++++
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~-----l~~L~~L~Ls~ 169 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPEL-----PTSLEVLSVRN 169 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCC-----CTTCCEEECCS
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCc-----CCCcCEEECCC
Confidence 88888888886 776 655 78888888888885 665 56778888888887774 5541 24566666666
Q ss_pred CCCCCcccC-CCCCEEeccCCccccCCccccccC-------CCcccCCCccCC
Q 009972 202 ANLTGLCHL-SQLKVADFSYNFFVGSIPKCLEYL-------PSTSFQGNCLQN 246 (521)
Q Consensus 202 n~l~~~~~l-~~L~~L~ls~N~l~g~ip~~l~~l-------~~l~~~~N~l~~ 246 (521)
|.++++..+ ++|+.|+|++|+|+ .+|....++ ..+++++|.++.
T Consensus 170 N~L~~lp~l~~~L~~L~Ls~N~L~-~lp~~~~~L~~~~~~L~~L~Ls~N~l~~ 221 (571)
T 3cvr_A 170 NQLTFLPELPESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRITH 221 (571)
T ss_dssp SCCSCCCCCCTTCCEEECCSSCCS-SCCCCC--------CCEEEECCSSCCCC
T ss_pred CCCCCcchhhCCCCEEECcCCCCC-chhhHHHhhhcccccceEEecCCCccee
Confidence 666554322 45666666666666 455411244 555666665554
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.8e-18 Score=157.26 Aligned_cols=166 Identities=20% Similarity=0.147 Sum_probs=126.0
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccc
Q 009972 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (521)
+.++++++.++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 468899999987 45443 568999999999999877778899999999999999999766677899999999999999
Q ss_pred cCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccCCccccCC
Q 009972 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~g~i 227 (521)
++++..+..|.++++|++|+|++|++++..+..... ..++..+++++|.++++ ..+++|+.|++++|.+.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDK--LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhcc--CCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 999776677899999999999999999544432211 24566667777666542 34566777777777666544
Q ss_pred ccccccCCCcccCCCccCCC
Q 009972 228 PKCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 228 p~~l~~l~~l~~~~N~l~~~ 247 (521)
| .+..+++..|.+.+.
T Consensus 165 ~----~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 165 P----GIRYLSEWINKHSGV 180 (208)
T ss_dssp T----TTHHHHHHHHHCTTT
T ss_pred C----CHHHHHHHHHhCCce
Confidence 3 344455555655553
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.76 E-value=7.6e-19 Score=161.23 Aligned_cols=132 Identities=26% Similarity=0.342 Sum_probs=109.1
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCc-ccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccc
Q 009972 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
+.+++++|+++. +|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 356777888854 6665543 899999999999876664 488999999999999999988899999999999999999
Q ss_pred ccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCc
Q 009972 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|++++..|..|.++++|++|+|++|++++.+|.. +..+++|++|++++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------------~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGS---------------------FEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTS---------------------STTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHH---------------------hhcCCCCCEEEeCCCCccCcCc
Confidence 9999888888999999999999999999766642 3456788899999999887765
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.7e-19 Score=174.70 Aligned_cols=152 Identities=16% Similarity=0.084 Sum_probs=76.0
Q ss_pred CCCCEEEcCCCcccccCCccc--CCCCCCcEEEccCCCCCCCCC----cccCCCcCCceEecccccCCCCCchhhhCCCC
Q 009972 94 TYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIP----PEIGNLTGLVKINLQSNGLTGRLPAELGNLIS 167 (521)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 167 (521)
++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|+.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 445555555555555555555 555555555555555554433 23344555555555555555555555555555
Q ss_pred CCEEeCCCCcCCcc--CCCCCCCcccccccccccccCCCCCc--------ccCCCCCEEeccCCccccCCcccc------
Q 009972 168 LEELHLDRNRLQGA--VPAGSNSGYTANIHGMYASSANLTGL--------CHLSQLKVADFSYNFFVGSIPKCL------ 231 (521)
Q Consensus 168 L~~L~Ls~N~l~g~--~p~~~~~~~~~~l~~l~l~~n~l~~~--------~~l~~L~~L~ls~N~l~g~ip~~l------ 231 (521)
|++|+|++|++.+. ++.........++..+++++|.++.+ ..+++|++|||++|++++.+|..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 55555555555432 21111111123455555555555432 233555555555555555544332
Q ss_pred ccCCCcccCCCccC
Q 009972 232 EYLPSTSFQGNCLQ 245 (521)
Q Consensus 232 ~~l~~l~~~~N~l~ 245 (521)
.+|+.+++++|.+.
T Consensus 251 ~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 251 SALNSLNLSFAGLE 264 (310)
T ss_dssp TTCCCEECCSSCCC
T ss_pred CcCCEEECCCCCCC
Confidence 24445555555554
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.75 E-value=7.1e-18 Score=154.70 Aligned_cols=127 Identities=24% Similarity=0.323 Sum_probs=114.4
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCc-cccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEcc
Q 009972 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLG 126 (521)
Q Consensus 57 ~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 126 (521)
.|.|+.+.|+.. ..+++.|+|++|.+++..+. .++.+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 7 ~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 7 HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 367888888631 23789999999999987665 48999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCC
Q 009972 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 127 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
+|+|++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999998888889999999999999999999999999999999999999999986544
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.5e-18 Score=171.69 Aligned_cols=177 Identities=19% Similarity=0.172 Sum_probs=141.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|+++...+..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 47899999999999988889999999999999999999888888999999999999999999444444689999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCc------------------------------------cccc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG------------------------------------YTAN 193 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~------------------------------------~~~~ 193 (521)
++|++++..|..|.++++|++|++++|++++. +...... ...+
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 227 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 227 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-CGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSS
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCcc-ccccccccceeecccccccccCCCCcceEEECCCCeeeecccccccc
Confidence 99999988888899999999999999999853 2111000 0013
Q ss_pred ccccccccCCCCC---cccCCCCCEEeccCCccccCCcccc---ccCCCcccCCCccCCC
Q 009972 194 IHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 194 l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
+..+++++|.+++ +..+++|+.|++++|.+++..|..+ .+|+.+++++|.+...
T Consensus 228 L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (390)
T 3o6n_A 228 LTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL 287 (390)
T ss_dssp CCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEE
T ss_pred ccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCccc
Confidence 4555666666654 3457889999999999998777665 4566788888877654
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=167.11 Aligned_cols=171 Identities=18% Similarity=0.246 Sum_probs=143.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..|..|..+++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (330)
T 1xku_A 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVE 151 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEE
Confidence 357999999999999988999999999999999999998 5676655 7999999999999987788899999999999
Q ss_pred cccccCC--CCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccCC
Q 009972 149 LQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYN 221 (521)
Q Consensus 149 Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N 221 (521)
|++|.++ +..|..+.++++|++|++++|+++ .+|.... ..+..+++++|.+++ +..+++|+.|++++|
T Consensus 152 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 226 (330)
T 1xku_A 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP----PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN 226 (330)
T ss_dssp CCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC----TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSS
T ss_pred CCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc----ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 9999996 377888999999999999999998 5665433 467788888888764 456788889999999
Q ss_pred ccccCCcccc---ccCCCcccCCCccCCC
Q 009972 222 FFVGSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 222 ~l~g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
.+++..|..+ .+++.+++++|.+...
T Consensus 227 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 255 (330)
T 1xku_A 227 SISAVDNGSLANTPHLRELHLNNNKLVKV 255 (330)
T ss_dssp CCCEECTTTGGGSTTCCEEECCSSCCSSC
T ss_pred cCceeChhhccCCCCCCEEECCCCcCccC
Confidence 8887666554 4566778888877643
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.5e-18 Score=187.29 Aligned_cols=111 Identities=21% Similarity=0.254 Sum_probs=69.4
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.+++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 50 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 129 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 129 (680)
T ss_dssp TCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECC
T ss_pred cCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECC
Confidence 56666666666666666666666666666666666664444456666666666666666665555566666666666666
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCcc
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGA 181 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 181 (521)
+|.+++..|..++++++|++|++++|++++.
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 130 HNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp SSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCcccccCchhhcccccCCEEEccCCccccc
Confidence 6666665555666666666666666666543
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.3e-19 Score=195.18 Aligned_cols=173 Identities=21% Similarity=0.161 Sum_probs=78.6
Q ss_pred hhHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCCccceeeCCCCCCEEEEEecCCCCcc---------------------
Q 009972 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKG--------------------- 84 (521)
Q Consensus 26 ~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c~w~gv~C~~~~~~l~~L~L~~n~l~~--------------------- 84 (521)
..+..+|+++...........-..|.......+.|.++.++ .++++.|+|.+|.+..
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVS--TPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceec--CCccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 45678899998887544333345675544556789888876 3455555555554433
Q ss_pred ------cCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCC
Q 009972 85 ------FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL 158 (521)
Q Consensus 85 ------~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 158 (521)
.+|..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 12444556666666666666665 45555556666666666666666 56666666666666666666666 55
Q ss_pred chhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC
Q 009972 159 PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206 (521)
Q Consensus 159 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~ 206 (521)
|..|++|++|++|+|++|.|+ .+|..+.. ..+|..+++++|.+++
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~--l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGN--LCNLQFLGVEGNPLEK 330 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTS--CTTCCCEECTTSCCCS
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhc--CCCccEEeCCCCccCC
Confidence 666666666666666666665 55543211 2344445555555443
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-18 Score=171.99 Aligned_cols=165 Identities=19% Similarity=0.146 Sum_probs=84.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+ +..+++|++|+|++|++++..+ .++|++|++++|++++..+. .+++|+.|+|
T Consensus 58 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~-----~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l 127 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCS---RGQGKKNIYL 127 (317)
T ss_dssp TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCSEEEEC---CCSSCEEEEC
T ss_pred CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccC-----CCCcCEEECCCCccCCcCcc---ccCCCCEEEC
Confidence 467777777777776443 7777777777777777664321 13444444444444322221 2345555555
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCccccC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++..|..++.+++|++|+|++|++++..|..... ....+..+++++|.++++ ..+++|+.|++++|++++.
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l 206 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFM 206 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGG-GTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEE
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhh-ccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcc
Confidence 555555544445555555566666655555433322111 113455555555555432 2245555555555555532
Q ss_pred Ccc--ccccCCCcccCCCccC
Q 009972 227 IPK--CLEYLPSTSFQGNCLQ 245 (521)
Q Consensus 227 ip~--~l~~l~~l~~~~N~l~ 245 (521)
.|. .+.+++.+++++|.+.
T Consensus 207 ~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 207 GPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CGGGGGGTTCSEEECTTSCCC
T ss_pred hhhhcccCcccEEECcCCccc
Confidence 221 1233444555555544
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.4e-18 Score=177.85 Aligned_cols=179 Identities=21% Similarity=0.201 Sum_probs=133.9
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..+..|..+++|++|+|++|++.+..|..|..+++|++|+|++|.+++..|..|.++++|+.|+
T Consensus 79 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 158 (477)
T 2id5_A 79 LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLT 158 (477)
T ss_dssp CTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEE
T ss_pred CccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEE
Confidence 35789999999999987666789999999999999999988888999999999999999999988888999999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCc----------------------ccccccccccccCCCCC
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG----------------------YTANIHGMYASSANLTG 206 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~----------------------~~~~l~~l~l~~n~l~~ 206 (521)
|++|++++..+..|.++++|+.|+|++|.+++..+...... ...++..+++++|.++.
T Consensus 159 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 238 (477)
T 2id5_A 159 LEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA 238 (477)
T ss_dssp EESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCS
T ss_pred CCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccc
Confidence 99999997666778888999999999888885544322110 00144555666666654
Q ss_pred c-----ccCCCCCEEeccCCccccCCcccc---ccCCCcccCCCccCCC
Q 009972 207 L-----CHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 207 ~-----~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
+ ..+++|+.|+|++|.+++..+..+ .+|+.+++++|.+...
T Consensus 239 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (477)
T 2id5_A 239 VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV 287 (477)
T ss_dssp CCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEE
T ss_pred cCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceE
Confidence 3 346667777777777665554443 3445566666655543
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=153.62 Aligned_cols=148 Identities=13% Similarity=0.192 Sum_probs=118.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++. +| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 368999999999985 55 6999999999999999776 3457999999999999999999888999999999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCc-CCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNR-LQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
++|++++..|..++.+++|++|++++|+ ++ .+|. +..+++|+.|++++|.+++..+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~----------------------l~~l~~L~~L~l~~n~i~~~~~ 176 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMP----------------------LKTLPELKSLNIQFDGVHDYRG 176 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGG----------------------GGGCSSCCEEECTTBCCCCCTT
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHh----------------------hcCCCCCCEEECCCCCCcChHH
Confidence 9999998899999999999999999998 54 4441 3345566777777776664221
Q ss_pred -cccccCCCcccCCCcc
Q 009972 229 -KCLEYLPSTSFQGNCL 244 (521)
Q Consensus 229 -~~l~~l~~l~~~~N~l 244 (521)
..+.+|+.+++++|++
T Consensus 177 l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 177 IEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp GGGCSSCCEEEECBC--
T ss_pred hccCCCCCEEEeeCccc
Confidence 2234555566666654
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=165.27 Aligned_cols=169 Identities=19% Similarity=0.247 Sum_probs=133.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..|..|..+++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|+
T Consensus 77 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 457999999999999988999999999999999999998 5676665 8999999999999976667799999999999
Q ss_pred cccccCC--CCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccCCCCCEEeccCC
Q 009972 149 LQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYN 221 (521)
Q Consensus 149 Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N 221 (521)
+++|.++ +..|..+..+ +|++|++++|++++ +|.... ..+..+++++|.+++ +..+++|+.|++++|
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~----~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N 227 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP----ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHN 227 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC----SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSS
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc----CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 9999996 4677888888 89999999999884 665332 356677777777654 345667777777777
Q ss_pred ccccCCcccc---ccCCCcccCCCccCC
Q 009972 222 FFVGSIPKCL---EYLPSTSFQGNCLQN 246 (521)
Q Consensus 222 ~l~g~ip~~l---~~l~~l~~~~N~l~~ 246 (521)
++++..|..+ .+++.+++++|.+..
T Consensus 228 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 255 (332)
T 2ft3_A 228 QIRMIENGSLSFLPTLRELHLDNNKLSR 255 (332)
T ss_dssp CCCCCCTTGGGGCTTCCEEECCSSCCCB
T ss_pred cCCcCChhHhhCCCCCCEEECCCCcCee
Confidence 7776555444 345556677776653
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-17 Score=163.91 Aligned_cols=165 Identities=21% Similarity=0.339 Sum_probs=111.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ +|. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 467777777777776433 7777777777777777775 33 57777777777777777774 443 777777777777
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCccccC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++. |. +..+++|++|+|++|++++..+ . ....++..+++++|.++++ ..+++|+.|++++|++++.
T Consensus 137 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l---~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 137 DLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTP-L---ANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG-G---TTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCcC-cc-ccCCCCccEEEccCCcCCCChh-h---cCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcc
Confidence 77777743 33 7777777778877777774332 1 1124667777777777653 3567777777777777754
Q ss_pred Cc-cccccCCCcccCCCccCC
Q 009972 227 IP-KCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 227 ip-~~l~~l~~l~~~~N~l~~ 246 (521)
.| ..+.+|..+++++|++.+
T Consensus 211 ~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 211 SPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GGGTTCTTCCEEEEEEEEEEC
T ss_pred ccccCCCCCCEEEccCCeeec
Confidence 43 223455666777776655
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=9.7e-18 Score=179.72 Aligned_cols=178 Identities=20% Similarity=0.131 Sum_probs=144.2
Q ss_pred CCEEEEEecCCCCcccC--CccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCC-cccCCCcCCce
Q 009972 70 DRVLKINISGSSLKGFL--APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVK 146 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 146 (521)
.+++.|++++|.+++.. |..+..+++|++|+|++|.+.+..+. +..+++|++|++++|.+++..| ..+.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 56888888888887654 67788889999999999998865444 8889999999999999987666 56888999999
Q ss_pred EecccccCCCCCchhhhCCCCCCEEeCCCCcCC-ccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccC
Q 009972 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQ-GAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSY 220 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~ 220 (521)
|+|++|.+++..|..+.++++|++|++++|+++ +.+|..... ..++..+++++|.++++ ..+++|+.|++++
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE--LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhc--ccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 999999999888888999999999999999987 567754332 35788889999988753 5678899999999
Q ss_pred CccccCCcccc---ccCCCcccCCCccCCCCCc
Q 009972 221 NFFVGSIPKCL---EYLPSTSFQGNCLQNKDPK 250 (521)
Q Consensus 221 N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~~ 250 (521)
|++++..|..+ .+++.+++++|++.+.|+.
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99998777655 4556678999988887653
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-17 Score=149.74 Aligned_cols=127 Identities=24% Similarity=0.324 Sum_probs=85.9
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccC
Q 009972 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 57 ~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
.|.|.++.|... ..+++.|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467888888631 23567777777777765555567777777777777777765555567777777777777
Q ss_pred CCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCC
Q 009972 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 77775555556677777777777777775444445667777777777777765443
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.2e-17 Score=159.89 Aligned_cols=166 Identities=23% Similarity=0.344 Sum_probs=139.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++ +| .+..+++|+.|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 478999999999987 44 69999999999999999996544 9999999999999999985 44 7999999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCccccC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++ +|. +..+++|++|++++|++++..+ .....++..+++++|.++++ ..+++|+.|++++|++++.
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~----l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP----LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG----GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc----ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcC
Confidence 9999996 554 9999999999999999985443 11235788999999998764 5678999999999999865
Q ss_pred Cc-cccccCCCcccCCCccCCC
Q 009972 227 IP-KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 227 ip-~~l~~l~~l~~~~N~l~~~ 247 (521)
.| ..+.+|+.+++++|.+.+.
T Consensus 189 ~~l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 189 SPLASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp GGGGGCTTCCEEECTTSCCCBC
T ss_pred hhhcCCCCCCEEEccCCccCcc
Confidence 44 3456778899999988764
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-17 Score=148.70 Aligned_cols=139 Identities=22% Similarity=0.182 Sum_probs=112.5
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57889999999998 77888889999999999999999865 6788999999999999999977888888899999999
Q ss_pred cccccCCCCC-chhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCC
Q 009972 149 LQSNGLTGRL-PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 149 Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~i 227 (521)
|++|++++.. +..+..+++|++|++++|.+++..+... ..+..+++|+.|++++|.+. .+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~------------------~~~~~l~~L~~L~l~~n~~~-~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRE------------------SVFKLLPQLTYLDGYDREDQ-EA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHH------------------HHHTTCSSCCEETTEETTSC-BC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHH------------------HHHHhCccCcEecCCCCChh-hc
Confidence 9999998532 2788899999999999999884322000 12445778999999999876 45
Q ss_pred cc
Q 009972 228 PK 229 (521)
Q Consensus 228 p~ 229 (521)
|.
T Consensus 163 ~~ 164 (168)
T 2ell_A 163 PD 164 (168)
T ss_dssp CS
T ss_pred cc
Confidence 53
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-17 Score=178.58 Aligned_cols=175 Identities=19% Similarity=0.196 Sum_probs=143.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCC-CCCcccCCCcCCceE
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVKI 147 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 147 (521)
-.+++.|+|++|.+++..|..|+.+++|++|+|++|++++..|..|+.+++|++|+|++|++++ .+|..++++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 3589999999999999888999999999999999999998888889999999999999999986 467899999999999
Q ss_pred ecccccCCCCCc-hhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccCC
Q 009972 148 NLQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYN 221 (521)
Q Consensus 148 ~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N 221 (521)
+|++|++.+.+| ..|.++++|++|++++|++++.+|..... ..++..++++.|.+..+ ..+++|+.|++++|
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~--l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 206 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS--IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT--CSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc--cccCceEecccCcccccchhhHhhcccccEEEccCC
Confidence 999999655665 68999999999999999999888875433 24677777777776543 24778888888888
Q ss_pred ccccCC------ccccccCCCcccCCCccC
Q 009972 222 FFVGSI------PKCLEYLPSTSFQGNCLQ 245 (521)
Q Consensus 222 ~l~g~i------p~~l~~l~~l~~~~N~l~ 245 (521)
++++.. .....+++.+++.+|.+.
T Consensus 207 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 236 (549)
T 2z81_A 207 NLARFQFSPLPVDEVSSPMKKLAFRGSVLT 236 (549)
T ss_dssp BCTTCCCCCCSSCCCCCCCCEEEEESCEEE
T ss_pred ccccccccccchhhhhhcccceeccccccc
Confidence 887631 123455666666666543
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=7.7e-17 Score=180.84 Aligned_cols=172 Identities=22% Similarity=0.199 Sum_probs=148.8
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCC-CcccCCCcCCceEeccc
Q 009972 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI-PPEIGNLTGLVKINLQS 151 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~ 151 (521)
...|.++++++. +|. ..++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++
T Consensus 7 ~~~dcs~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 457788899987 554 5689999999999999999999999999999999999777677 78899999999999999
Q ss_pred ccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC------cccCCCCCEEeccCCcccc
Q 009972 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~------~~~l~~L~~L~ls~N~l~g 225 (521)
|++++..|..|+++++|++|+|++|++++.+|.........+++.+++++|.+++ +..+++|+.|++++|.+++
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 9999988999999999999999999999877764322234688999999998865 4568999999999999998
Q ss_pred CCcccc-----ccCCCcccCCCccCCCC
Q 009972 226 SIPKCL-----EYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 226 ~ip~~l-----~~l~~l~~~~N~l~~~~ 248 (521)
..|..+ .++..+++++|.+....
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~ 190 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRV 190 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCC
T ss_pred eCHHHcccccCCccceEECCCCcccccc
Confidence 888776 46788899999877643
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-17 Score=175.52 Aligned_cols=172 Identities=20% Similarity=0.180 Sum_probs=139.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 35799999999999998888999999999999999999988888999999999999999999988889999999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCc-cCCCCCCCcccccccccccccCCCCCc-----ccCCCC----CEEec
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQL----KVADF 218 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L----~~L~l 218 (521)
|++|++++..+..++++++|++|++++|.+++ .+|..... ..+++.+++++|.++++ ..+++| ..+++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l 184 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN--LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGG--CTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcc--cCCCCEEeCcCCccceecHHHccchhccchhhhhccc
Confidence 99999996555579999999999999999986 35653321 24677777777776543 234455 67788
Q ss_pred cCCccccCCccccc--cCCCcccCCC
Q 009972 219 SYNFFVGSIPKCLE--YLPSTSFQGN 242 (521)
Q Consensus 219 s~N~l~g~ip~~l~--~l~~l~~~~N 242 (521)
++|.+++..|..+. +++.+++.+|
T Consensus 185 ~~n~l~~~~~~~~~~~~L~~L~l~~n 210 (570)
T 2z63_A 185 SLNPMNFIQPGAFKEIRLHKLTLRNN 210 (570)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCceecCHHHhccCcceeEecccc
Confidence 88887766665553 3555666665
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=160.82 Aligned_cols=152 Identities=22% Similarity=0.123 Sum_probs=129.5
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccC-CCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccc
Q 009972 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
..+++++++|+. +|..+. ..++.|+|++|+|++..+..+. .+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 368999999987 666554 5689999999999988888887 999999999999999987788899999999999999
Q ss_pred ccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCccc-
Q 009972 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC- 230 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~~- 230 (521)
|+|++..+..|.++++|++|+|++|++++..|. .+..+++|+.|+|++|+|++..+..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~l~~~~~ 156 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRN---------------------AFEDMAQLQKLYLSQNQISRFPVELI 156 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTT---------------------TTTTCTTCCEEECCSSCCCSCCGGGT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHH---------------------HhCCcccCCEEECCCCcCCeeCHHHh
Confidence 999987777899999999999999999855443 2455788999999999999533333
Q ss_pred -----cccCCCcccCCCccCCCC
Q 009972 231 -----LEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 231 -----l~~l~~l~~~~N~l~~~~ 248 (521)
+.+|..|++++|.+....
T Consensus 157 ~~~~~l~~L~~L~L~~N~l~~l~ 179 (361)
T 2xot_A 157 KDGNKLPKLMLLDLSSNKLKKLP 179 (361)
T ss_dssp C----CTTCCEEECCSSCCCCCC
T ss_pred cCcccCCcCCEEECCCCCCCccC
Confidence 456778999999988764
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.8e-16 Score=145.41 Aligned_cols=128 Identities=30% Similarity=0.400 Sum_probs=110.9
Q ss_pred EEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccccc
Q 009972 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (521)
Q Consensus 74 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (521)
.+++++|+++. +|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 57788888875 566553 68999999999998 688999999999999999999998888899999999999999999
Q ss_pred CCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccC
Q 009972 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ 226 (521)
+++..|..|.++++|++|+|++|+++ .+|.. .+..+++|+.|++++|.+...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~--------------------~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEG--------------------AFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCC-BCCTT--------------------TTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCC-eeChh--------------------hhhcCccccEEEeCCCCeecC
Confidence 99888889999999999999999998 45442 234577899999999998743
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.9e-17 Score=171.80 Aligned_cols=155 Identities=23% Similarity=0.253 Sum_probs=136.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccc--cCCcccCCCCCCcEEEccCCCCCCCCCcc-cCCCcCCc
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLV 145 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~ 145 (521)
..+++.|+|++|.+++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4689999999999999999999999999999999999997 56788999999999999999999867765 88999999
Q ss_pred eEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccC
Q 009972 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSY 220 (521)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~ 220 (521)
.|+|++|++++.+|..+. ++|++|+|++|+++ .+|.... ....+..+++++|.++.+ ..+++|+.|++++
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~--~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 477 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV--KLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHT 477 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG--GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh--cCCCCCEEECCCCcCCccCHHHhccCCcccEEECcC
Confidence 999999999988887664 79999999999999 7876443 246788999999998754 4578999999999
Q ss_pred CccccCCc
Q 009972 221 NFFVGSIP 228 (521)
Q Consensus 221 N~l~g~ip 228 (521)
|.+++..+
T Consensus 478 N~~~c~c~ 485 (520)
T 2z7x_B 478 NPWDCSCP 485 (520)
T ss_dssp SCBCCCHH
T ss_pred CCCcccCC
Confidence 99997655
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=156.48 Aligned_cols=164 Identities=23% Similarity=0.328 Sum_probs=121.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++.. +.+..+++|++|+|++|++++..| +..+++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 3678888888888764 347888888888888888886544 8888888888888888874 33 4888888888888
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCccccC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++ + +.+..+++|++|++++|++++. +. .....++..+++++|.++++ ..+++|+.|++++|.+++
T Consensus 120 ~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~---l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~- 192 (291)
T 1h6t_A 120 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TV---LSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD- 192 (291)
T ss_dssp TTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GG---GGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-
T ss_pred CCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hh---hccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-
Confidence 8888885 3 4678888888888888888743 21 11234677788888877654 457788889999998874
Q ss_pred Ccc--ccccCCCcccCCCccCC
Q 009972 227 IPK--CLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 227 ip~--~l~~l~~l~~~~N~l~~ 246 (521)
+|. .+.+|..+++++|.+..
T Consensus 193 l~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 193 LRALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CGGGTTCTTCSEEEEEEEEEEC
T ss_pred ChhhccCCCCCEEECcCCcccC
Confidence 453 23456667788886655
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.8e-16 Score=141.94 Aligned_cols=133 Identities=26% Similarity=0.281 Sum_probs=114.0
Q ss_pred EEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccc
Q 009972 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
.+.+++++|+++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3579999999987 45443 47999999999999987777889999999999999999977777789999999999999
Q ss_pred ccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCc
Q 009972 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|++++..+..+..+++|++|+|++|+++ .+|.. .+..+++|+.|++++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~--------------------~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDG--------------------IFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTT--------------------TTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcce-EeCHH--------------------HhcCCcccCEEEecCCCeeccCc
Confidence 9999877777899999999999999998 44432 13457789999999999997765
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.1e-17 Score=172.13 Aligned_cols=155 Identities=21% Similarity=0.229 Sum_probs=136.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccc--cCCcccCCCCCCcEEEccCCCCCCCCCc-ccCCCcCCc
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPP-EIGNLTGLV 145 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~ 145 (521)
..+++.|+|++|.+++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|. .+..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 5689999999999999999999999999999999999997 3457799999999999999999986665 488999999
Q ss_pred eEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccC
Q 009972 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSY 220 (521)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~ 220 (521)
.|+|++|++++.+|..+. ++|++|+|++|+++ .+|.... ....+..+++++|.++.+ ..+++|+.|++++
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~--~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT--HLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT--SSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc--CCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 999999999987776554 79999999999999 7887654 246789999999999864 4578999999999
Q ss_pred CccccCCc
Q 009972 221 NFFVGSIP 228 (521)
Q Consensus 221 N~l~g~ip 228 (521)
|.+++..|
T Consensus 507 N~~~c~c~ 514 (562)
T 3a79_B 507 NPWDCTCP 514 (562)
T ss_dssp CCBCCCHH
T ss_pred CCcCCCcc
Confidence 99998766
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.69 E-value=6.9e-17 Score=162.53 Aligned_cols=190 Identities=12% Similarity=0.131 Sum_probs=146.7
Q ss_pred CCccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCC-cccCCCCCCcE-EEcc
Q 009972 58 CHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKI-LDLG 126 (521)
Q Consensus 58 c~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls 126 (521)
|.|..|.|+. ...+++.|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 6888899963 12468999999999998666689999999999999999877665 46889988775 6777
Q ss_pred CCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCC-CcCCccCCCCCCCcccccccccccccCCCC
Q 009972 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 127 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
.|+++...|..|..+++|++|++++|++++..+..+....++..|++.+ |++. .+|...+......+..+++++|.++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchhhcchhhhhhcccccccc
Confidence 8999977788999999999999999999976666677777888888866 4565 6666544444456777888888887
Q ss_pred Ccc----cCCCCCEEeccCCccccCCcc-c---cccCCCcccCCCccCCCC
Q 009972 206 GLC----HLSQLKVADFSYNFFVGSIPK-C---LEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 206 ~~~----~l~~L~~L~ls~N~l~g~ip~-~---l~~l~~l~~~~N~l~~~~ 248 (521)
.+. ...+|+.+++++|+..+.+|. . +.+|+.+++++|.++...
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp 218 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLP 218 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCC
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccC
Confidence 643 345788888876444446664 2 356777888888877654
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.4e-17 Score=144.46 Aligned_cols=131 Identities=22% Similarity=0.178 Sum_probs=111.9
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 47899999999999 78999999999999999999999976 7799999999999999999987999888899999999
Q ss_pred cccccCCCC-CchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccC
Q 009972 149 LQSNGLTGR-LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSY 220 (521)
Q Consensus 149 Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~ 220 (521)
|++|++++. .|..+..+++|++|++++|++++..+... ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~------------------~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE------------------NVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHH------------------HHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHH------------------HHHHHCCCcccccCCC
Confidence 999999963 44889999999999999999985432000 0234577888888864
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=9.6e-17 Score=173.85 Aligned_cols=168 Identities=15% Similarity=0.089 Sum_probs=136.7
Q ss_pred EEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccC
Q 009972 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGL 154 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 154 (521)
.+-++.+++. +|+.+. +++++|||++|+|++..|.+|.++++|++|||++|+|++..|..|.++++|++|+|++|+|
T Consensus 36 ~~c~~~~l~~-vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 36 YQCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp EECTTSCCSS-CCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcCc-cCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 4556666765 666542 5899999999999988888999999999999999999987788899999999999999999
Q ss_pred CCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC------cccCCCCCEEeccCCccccCCc
Q 009972 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 155 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~------~~~l~~L~~L~ls~N~l~g~ip 228 (521)
++..|..|.++++|++|+|++|++++ +|..... ...+++.+++++|.++. +..+++|++|++++|++++..|
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~-l~~~~~~-~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLAS-LENFPIG-HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCC-STTCCCT-TCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCC-CChhhhh-cCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 97777889999999999999999995 4443222 13578899999998865 3468999999999999998888
Q ss_pred cccccCCC-------cccCCCccCCC
Q 009972 229 KCLEYLPS-------TSFQGNCLQNK 247 (521)
Q Consensus 229 ~~l~~l~~-------l~~~~N~l~~~ 247 (521)
..+..+.. ++++.|.+...
T Consensus 191 ~~l~~L~~l~~~~~~~~ls~n~l~~i 216 (635)
T 4g8a_A 191 TDLRVLHQMPLLNLSLDLSLNPMNFI 216 (635)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEE
T ss_pred ccccchhhhhhhhhhhhcccCccccc
Confidence 77655432 44666765543
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-16 Score=167.47 Aligned_cols=155 Identities=27% Similarity=0.269 Sum_probs=123.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.|+. +| ..+++|++|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 578999999999984 66 567899999999999997 776 665 89999999999986 776 6789999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCC-CC-------CEEeccCC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS-QL-------KVADFSYN 221 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~-~L-------~~L~ls~N 221 (521)
++|+|++ +|. .+++|++|+|++|+|++ +|. .. .++..+++++|.++.+..+. +| +.|+|++|
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~----~~L~~L~Ls~N~L~~lp~~~~~L~~~~~~L~~L~Ls~N 217 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP----ESLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCREN 217 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC----TTCCEEECCSSCCSSCCCCC--------CCEEEECCSS
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh----CCCCEEECcCCCCCchhhHHHhhhcccccceEEecCCC
Confidence 9999985 766 67899999999999985 776 22 67888899999887654422 56 88999999
Q ss_pred ccccCCccccc---cCCCcccCCCccCCC
Q 009972 222 FFVGSIPKCLE---YLPSTSFQGNCLQNK 247 (521)
Q Consensus 222 ~l~g~ip~~l~---~l~~l~~~~N~l~~~ 247 (521)
+|+ .+|..+. ++..+++++|++.+.
T Consensus 218 ~l~-~lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 218 RIT-HIPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp CCC-CCCGGGGGSCTTEEEECCSSSCCHH
T ss_pred cce-ecCHHHhcCCCCCEEEeeCCcCCCc
Confidence 998 6787654 445678888887664
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-16 Score=164.89 Aligned_cols=165 Identities=24% Similarity=0.372 Sum_probs=76.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|++++|.+++..| ++.+++|++|++++|++++. ..+..+++|++|++++|.+++..| +..+++|+.|+++
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 200 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 273 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred CCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECC
Confidence 45555555555555333 44455555555555555432 234444555555555555543322 4444445555555
Q ss_pred cccCCCCCc---------------------hhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---
Q 009972 151 SNGLTGRLP---------------------AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206 (521)
Q Consensus 151 ~N~l~g~~p---------------------~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~--- 206 (521)
+|.+++..| . +..+++|++|+|++|++++..|. .....+..+++++|.+++
T Consensus 274 ~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~~----~~l~~L~~L~l~~n~l~~~~~ 348 (466)
T 1o6v_A 274 ANQISNISPLAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISPV----SSLTKLQRLFFYNNKVSDVSS 348 (466)
T ss_dssp SSCCCCCGGGTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGGG----GGCTTCCEEECCSSCCCCCGG
T ss_pred CCccCccccccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchhh----ccCccCCEeECCCCccCCchh
Confidence 554443222 1 44444555555555544433331 112344445555554443
Q ss_pred cccCCCCCEEeccCCccccCCc-cccccCCCcccCCCccCC
Q 009972 207 LCHLSQLKVADFSYNFFVGSIP-KCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 207 ~~~l~~L~~L~ls~N~l~g~ip-~~l~~l~~l~~~~N~l~~ 246 (521)
+..+++|+.|++++|++++..| ..+.++..+++++|.+.+
T Consensus 349 l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 349 LANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred hccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 2334555555555555554444 112334444555554444
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-16 Score=145.21 Aligned_cols=123 Identities=21% Similarity=0.276 Sum_probs=110.0
Q ss_pred CCCccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccC
Q 009972 57 PCHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 57 ~c~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
.|.|..+.|+. ....++.|+|++|.|+. +|..|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 9 ~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 9 TCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 35677777763 13479999999999984 778999999999999999999988888999999999999999
Q ss_pred CCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCc
Q 009972 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
|+|++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99998888899999999999999999997666679999999999999999873
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-17 Score=165.54 Aligned_cols=135 Identities=9% Similarity=0.019 Sum_probs=93.6
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccc----------cchhhHHH--------HHHHHHHHhccCCCccceeee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----------WTGYLELY--------FQREVADLARINHENTGKLLG 425 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----------~~~~~~~~--------~~~E~~~l~~l~H~niv~l~g 425 (521)
..||+|++|.||+|..++|+.||||++...... ........ ..+|...|.++.+.++....-
T Consensus 101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p 180 (397)
T 4gyi_A 101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEP 180 (397)
T ss_dssp EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCE
T ss_pred CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Confidence 689999999999999999999999987422100 00011112 234555555554433322111
Q ss_pred EeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---
Q 009972 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF--- 502 (521)
Q Consensus 426 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~--- 502 (521)
+... ..+|||||+++++|..+... .....++.|++.+|.|||+. +||||||||.|||+++++
T Consensus 181 ~~~~----~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~ 245 (397)
T 4gyi_A 181 IAQS----RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAE 245 (397)
T ss_dssp EEEE----TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSS
T ss_pred eecc----CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCcc
Confidence 1111 24799999999888765421 12356889999999999998 999999999999998776
Q ss_pred -------CeeeCCCchhh
Q 009972 503 -------SPKVSPLCLSF 513 (521)
Q Consensus 503 -------~~kl~DfGla~ 513 (521)
.+.|+||+-+-
T Consensus 246 d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 246 DPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp CTTSEEEEEEECCCTTCE
T ss_pred cccccccceEEEEeCCcc
Confidence 38999999653
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.67 E-value=7.5e-16 Score=160.49 Aligned_cols=162 Identities=22% Similarity=0.178 Sum_probs=84.0
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|++++. | ++++++|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 455555555555542 2 455555555555555555542 2 55555555555555555532 2 5555555555555
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCc---------------------cCCCCCCCcccccccccccccCCCCC--c
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQG---------------------AVPAGSNSGYTANIHGMYASSANLTG--L 207 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g---------------------~~p~~~~~~~~~~l~~l~l~~n~l~~--~ 207 (521)
+|++++ +| ++.+++|++|++++|++++ .++.. ....+..++++.|.+++ +
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~~~~~~~~~----~l~~L~~L~ls~n~l~~l~l 187 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVT----PQTQLTTLDCSFNKITELDV 187 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCSCCCCCCCT----TCTTCCEEECCSSCCCCCCC
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCccceeccccCCcCCEEECCCCCcccccccc----cCCcCCEEECCCCccceecc
Confidence 555553 33 4555555555555555553 33211 11345555666666554 2
Q ss_pred ccCCCCCEEeccCCccccCCccccccCCCcccCCCccCCC
Q 009972 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~~l~~l~~~~N~l~~~ 247 (521)
..+++|+.|++++|++++.--..+.+++.+++++|.+.+.
T Consensus 188 ~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~i 227 (457)
T 3bz5_A 188 SQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEI 227 (457)
T ss_dssp TTCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCC
T ss_pred ccCCCCCEEECcCCcCCeeccccCCCCCEEECcCCccccc
Confidence 3455666666666666643222334555666666666653
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-15 Score=158.68 Aligned_cols=157 Identities=27% Similarity=0.329 Sum_probs=101.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|++++|.+++ +|. ..++|++|+|++|++++ +| +|+.+++|++|++++|++++ +|..+ .+|++|+++
T Consensus 112 ~L~~L~l~~n~l~~-l~~---~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~ 181 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSD---LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAG 181 (454)
T ss_dssp TCCEEECCSSCCSC-CCS---CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECC
T ss_pred CCcEEECCCCccCc-ccC---CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECc
Confidence 44444444444443 111 11567777777777775 56 47777777777777777774 55443 477777777
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---cccCCCCCEEeccCCccccCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~i 227 (521)
+|++++ +| .++++++|++|++++|++++ +|... ..+..+++++|.++. +..+++|+.|++++|++++ +
T Consensus 182 ~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~-----~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~N~l~~-l 252 (454)
T 1jl5_A 182 NNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP-----LSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-L 252 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-----TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-C
T ss_pred CCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-----CcccEEECcCCcCCcccccCCCCCCCEEECCCCcCCc-c
Confidence 777775 55 57777788888888887774 44321 356667777776654 3456677777777777774 5
Q ss_pred ccccccCCCcccCCCccCC
Q 009972 228 PKCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 228 p~~l~~l~~l~~~~N~l~~ 246 (521)
|..+.+++.+++++|.+..
T Consensus 253 ~~~~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 253 PDLPPSLEALNVRDNYLTD 271 (454)
T ss_dssp CSCCTTCCEEECCSSCCSC
T ss_pred cccccccCEEECCCCcccc
Confidence 6556677777777776665
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.4e-16 Score=156.19 Aligned_cols=169 Identities=24% Similarity=0.286 Sum_probs=127.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|+
T Consensus 154 l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~ 227 (347)
T 4fmz_A 154 MTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLK 227 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEE
Confidence 3578889999998887543 8888999999999998885433 7888888889988888885443 77888888888
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---cccCCCCCEEeccCCcccc
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g 225 (521)
|++|++++ +|. +..+++|++|++++|++++ ++.. ....++..+++++|.+++ +..+++|+.|++++|.+++
T Consensus 228 l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~~---~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 228 IGNNKITD-LSP-LANLSQLTWLEIGTNQISD-INAV---KDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGGG---TTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCG
T ss_pred ccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-ChhH---hcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCC
Confidence 88888885 444 8888888888888888874 3321 122467788888888765 4457888888888888887
Q ss_pred CCcccc---ccCCCcccCCCccCCCCC
Q 009972 226 SIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 226 ~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
..|..+ .+++.+++++|.+.+..+
T Consensus 302 ~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 302 EDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp GGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred cChhHhhccccCCEEEccCCccccccC
Confidence 777654 455667888887776543
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=171.68 Aligned_cols=174 Identities=28% Similarity=0.337 Sum_probs=95.1
Q ss_pred CCCCCCCCCCCCcccee--------eCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCC
Q 009972 48 SNWNALDADPCHWTGIA--------CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKR 119 (521)
Q Consensus 48 ~~W~~~~~~~c~w~gv~--------C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 119 (521)
..|.. +.+||.|.|.. |. ...++.|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+++
T Consensus 13 ~~W~~-~~~~~~~~~r~~~~~~~~~c~--~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 13 SAWRR-AAPAEESRGRAAVVQKMRACL--NNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp HHHHH-TCCGGGHHHHHHHHHHHHHHH--HHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHh-cCCcchhccccccCccccccc--CCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 45643 34578886532 32 234667777777776 3555554 66777777777766 3444 4566
Q ss_pred CcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCccccccccccc
Q 009972 120 LKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199 (521)
Q Consensus 120 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l 199 (521)
|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|+++ .+|... .++..+++
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~l-----~~L~~L~L 148 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVLP-----PGLQELSV 148 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCCC-----TTCCEEEC
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCCC-----CCCCEEEC
Confidence 777777777766 4554 45666666666666663 443 3455555555555555 233321 23444444
Q ss_pred ccCCCCC--------------------cc-cCCCCCEEeccCCccccCCccccccCCCcccCCCccCC
Q 009972 200 SSANLTG--------------------LC-HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 200 ~~n~l~~--------------------~~-~l~~L~~L~ls~N~l~g~ip~~l~~l~~l~~~~N~l~~ 246 (521)
++|.+++ +. .+++|+.|++++|.+++ +|..+.++..+.+++|.+..
T Consensus 149 s~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~ 215 (622)
T 3g06_A 149 SDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS 215 (622)
T ss_dssp CSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS
T ss_pred cCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccc
Confidence 4444443 32 12455566666665552 44444444445555554443
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-16 Score=167.47 Aligned_cols=109 Identities=18% Similarity=0.172 Sum_probs=93.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccC-CCcCCceEe
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~ 148 (521)
.+++.|+|++|.+++..+. .+++|+.|+|++|.+++..|..++.+++|++|+|++|.+++.+|..+. .+++|+.|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 5788899999999886553 468899999999999998898999999999999999999988888886 799999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCC
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
|++|.+++. |. +..+++|++|+|++|++++..|
T Consensus 176 Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~ 208 (487)
T 3oja_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP 208 (487)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG
T ss_pred cCCCccccc-cc-cccCCCCCEEECCCCCCCCCCH
Confidence 999999965 33 4468999999999999996444
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.65 E-value=6e-16 Score=151.51 Aligned_cols=144 Identities=26% Similarity=0.368 Sum_probs=125.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ + +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 589999999999998544 9999999999999999986 44 49999999999999999985 4 57889999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCcccc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g 225 (521)
++|++++. ..+..+++|++|++++|++++..|- ....++..+++++|.++.+ ..+++|+.|++++|+++.
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l----~~l~~L~~L~L~~N~i~~l~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPL----AGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGG----TTCTTCCEEECCSSCCCBCGGGTTCTTCSEEEEEEEEEEC
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchhh----cCCCccCEEECCCCcCCCChhhccCCCCCEEECcCCcccC
Confidence 99999964 6799999999999999999965541 1235788999999998764 568899999999999985
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-15 Score=157.50 Aligned_cols=163 Identities=21% Similarity=0.230 Sum_probs=95.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCC---------------
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP--------------- 135 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p--------------- 135 (521)
+++.|+|++|.+++. | ++.+++|++|+|++|++++. | ++.+++|++|+|++|++++ +|
T Consensus 65 ~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~~~~l~~L~~L~l~~N 137 (457)
T 3bz5_A 65 GLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LDVSQNPLLTYLNCARN 137 (457)
T ss_dssp TCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CCCTTCTTCCEEECTTS
T ss_pred CCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ecCCCCCcCCEEECCCC
Confidence 455555555555542 2 44555555555555555432 2 4444555555555554443 22
Q ss_pred ----cccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC--ccc
Q 009972 136 ----PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--LCH 209 (521)
Q Consensus 136 ----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~--~~~ 209 (521)
-.++.+++|++|++++|+..+.+ .++.+++|++|++++|++++ +|-. ....+..++++.|.+++ +..
T Consensus 138 ~l~~l~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~l~----~l~~L~~L~l~~N~l~~~~l~~ 210 (457)
T 3bz5_A 138 TLTEIDVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LDVS----QNKLLNRLNCDTNNITKLDLNQ 210 (457)
T ss_dssp CCSCCCCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CCCT----TCTTCCEEECCSSCCSCCCCTT
T ss_pred ccceeccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-eccc----cCCCCCEEECcCCcCCeecccc
Confidence 01444444444444444333333 36677888888888888885 5521 12467778888888775 456
Q ss_pred CCCCCEEeccCCccccCCc-cccccCCCcccCCCccCCCC
Q 009972 210 LSQLKVADFSYNFFVGSIP-KCLEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 210 l~~L~~L~ls~N~l~g~ip-~~l~~l~~l~~~~N~l~~~~ 248 (521)
+++|+.|++++|++++ +| ..+.+++.+++++|.+.+..
T Consensus 211 l~~L~~L~Ls~N~l~~-ip~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 211 NIQLTFLDCSSNKLTE-IDVTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp CTTCSEEECCSSCCSC-CCCTTCTTCSEEECCSSCCSCCC
T ss_pred CCCCCEEECcCCcccc-cCccccCCCCEEEeeCCcCCCcC
Confidence 7788888888888886 55 33456677778888777653
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=158.71 Aligned_cols=160 Identities=24% Similarity=0.335 Sum_probs=130.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++ +| +++.+++|++|++++|++++ +|..+ ++|++|++++|++++ +| .++++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 589999999999998 67 69999999999999999996 66543 589999999999996 67 6999999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCccc-CCCCCEEeccCCccccCCc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH-LSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~-l~~L~~L~ls~N~l~g~ip 228 (521)
++|++++ +|.. .++|++|++++|+++ .+|... ...++..+++++|.++++.. +++|+.|++++|++++ +|
T Consensus 203 ~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp~~~---~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~N~l~~-l~ 273 (454)
T 1jl5_A 203 DNNSLKK-LPDL---PLSLESIVAGNNILE-ELPELQ---NLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTD-LP 273 (454)
T ss_dssp CSSCCSS-CCCC---CTTCCEEECCSSCCS-SCCCCT---TCTTCCEEECCSSCCSSCCSCCTTCCEEECCSSCCSC-CC
T ss_pred CCCcCCc-CCCC---cCcccEEECcCCcCC-cccccC---CCCCCCEEECCCCcCCcccccccccCEEECCCCcccc-cC
Confidence 9999985 5543 258899999999888 677421 23577888888888887643 4688888888888885 77
Q ss_pred cccccCCCcccCCCccCC
Q 009972 229 KCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 229 ~~l~~l~~l~~~~N~l~~ 246 (521)
..+.+++.+++++|.+.+
T Consensus 274 ~~~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 274 ELPQSLTFLDVSENIFSG 291 (454)
T ss_dssp CCCTTCCEEECCSSCCSE
T ss_pred cccCcCCEEECcCCccCc
Confidence 777788888888887766
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.3e-16 Score=142.72 Aligned_cols=129 Identities=19% Similarity=0.260 Sum_probs=111.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++. ++.+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..++.+++|++|+|
T Consensus 66 ~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 479999999997754 458999999999999999999888999999999999999999999888999999999999999
Q ss_pred cccc-CCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCcccc
Q 009972 150 QSNG-LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 150 s~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g 225 (521)
++|. ++ .+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 144 ~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~----------------------~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 144 SYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR----------------------GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT----------------------TGGGCSSCCEEEECBC----
T ss_pred cCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH----------------------HhccCCCCCEEEeeCcccCC
Confidence 9998 55 676 69999999999999999984 32 24467889999999999864
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.9e-17 Score=178.82 Aligned_cols=147 Identities=23% Similarity=0.296 Sum_probs=118.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
...++.|+|++|.+. .+|+.+..+++|++|+|++|.|+ .+|..|+.|++|++|+|++|.|+ .+|..|++|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 457899999999998 58888889999999999999999 89999999999999999999999 8899999999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCC
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYN 221 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N 221 (521)
|++|.|+ .+|..|++|++|++|+|++|+|++.+|..... .......++++.|.+++.. ...|+.|+++.|
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~~~~~~l~l~~N~l~~~~-p~~l~~l~l~~n 369 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE-KSVTGLIFYLRDNRPEIPL-PHERRFIEINTD 369 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH-HHHHHHHHHHHHCCCCCCC-CCC---------
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhh-cchhhhHHhhccCcccCcC-ccccceeEeecc
Confidence 9999998 78999999999999999999999888763321 1112234677888877643 356888888887
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.64 E-value=6.8e-16 Score=165.80 Aligned_cols=145 Identities=26% Similarity=0.365 Sum_probs=101.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+|+.|+|++|.|++..| +..+++|+.|+|++|.|.+ +| .+..+++|+.|+|++|++++ + +.+..+++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 467778888888777543 7777888888888887774 33 57777788888888887774 3 35777778888888
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCccccC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++. ..+..+++|+.|+|++|++++..|- ....+|..+++++|.++++ ..+++|+.|+|++|.+++.
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l----~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPL----AGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGG----TTCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEECC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchhh----ccCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcCC
Confidence 88887753 5677778888888888877765551 1124666777777776553 4466777777777777643
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.64 E-value=1e-15 Score=147.55 Aligned_cols=144 Identities=24% Similarity=0.323 Sum_probs=108.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++. ++ .+..+++|++|+|++|++++..| +..+++|++|+|++|++++ +|.... ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 478999999999986 44 78999999999999999997554 9999999999999999985 554333 89999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---cccCCCCCEEeccCCccccC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++ +| .+..+++|++|+|++|++++. |. .....++..+++++|.+++ +..+++|+.|++++|.+++.
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~---l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VM---LGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GG---GGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hH---HccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 9999995 44 599999999999999999853 32 1112345555566665544 23455566666666665533
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.63 E-value=9.8e-16 Score=137.05 Aligned_cols=134 Identities=22% Similarity=0.177 Sum_probs=111.9
Q ss_pred cCCCCCCEEEcCCCccc-ccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCC
Q 009972 91 GLLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLE 169 (521)
Q Consensus 91 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 169 (521)
...++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34588999999999998 78899999999999999999999965 7899999999999999999988999999999999
Q ss_pred EEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCc---ccc---ccCCCcccCCCc
Q 009972 170 ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP---KCL---EYLPSTSFQGNC 243 (521)
Q Consensus 170 ~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip---~~l---~~l~~l~~~~N~ 243 (521)
+|+|++|++++ +|. +..+..+++|+.|++++|.+++..+ ..+ .++..+++.+|.
T Consensus 99 ~L~Ls~N~l~~-~~~-------------------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 99 HLNLSGNKLKD-IST-------------------LEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp EEECBSSSCCS-SGG-------------------GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred EEeccCCccCc-chh-------------------HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 99999999984 221 0134567899999999999996655 244 556667788885
Q ss_pred cCC
Q 009972 244 LQN 246 (521)
Q Consensus 244 l~~ 246 (521)
+..
T Consensus 159 ~~~ 161 (168)
T 2ell_A 159 DQE 161 (168)
T ss_dssp SCB
T ss_pred hhh
Confidence 544
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=152.82 Aligned_cols=168 Identities=22% Similarity=0.308 Sum_probs=133.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+++ ++. +..+++|+.|+
T Consensus 131 l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 205 (347)
T 4fmz_A 131 LTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFT 205 (347)
T ss_dssp CTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEE
T ss_pred CCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceee
Confidence 3578999999997666544 48999999999999999886544 8889999999999999984 444 88899999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---cccCCCCCEEeccCCcccc
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g 225 (521)
+++|.+++..+ +..+++|++|++++|++++..+ .....++..+++++|.++. +..+++|+.|++++|++++
T Consensus 206 l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~----~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 279 (347)
T 4fmz_A 206 AYVNQITDITP--VANMTRLNSLKIGNNKITDLSP----LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD 279 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG----GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred cccCCCCCCch--hhcCCcCCEEEccCCccCCCcc----hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCC
Confidence 99999986444 8889999999999999985443 1123578888999998876 4567899999999999985
Q ss_pred CCc--cccccCCCcccCCCccCCCC
Q 009972 226 SIP--KCLEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 226 ~ip--~~l~~l~~l~~~~N~l~~~~ 248 (521)
. | ..+.+++.+++++|.+....
T Consensus 280 ~-~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 280 I-SVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp C-GGGGGCTTCSEEECCSSCCCGGG
T ss_pred C-hhhcCCCCCCEEECcCCcCCCcC
Confidence 3 4 23467778889999776543
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.6e-15 Score=158.55 Aligned_cols=167 Identities=26% Similarity=0.399 Sum_probs=140.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|++++|.+++. +.+..+++|++|++++|.+.+..| ++.+++|++|++++|++++ + ..+..+++|+.|+
T Consensus 176 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 249 (466)
T 1o6v_A 176 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLD 249 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEE
Confidence 35799999999999874 458999999999999999997666 7889999999999999985 4 4688999999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCcccc
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g 225 (521)
+++|.+++..| +..+++|++|++++|++++..|-. ....+..+++++|.++++ ..+++|+.|++++|++++
T Consensus 250 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~----~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 250 LANNQISNLAP--LSGLTKLTELKLGANQISNISPLA----GLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGT----TCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSC
T ss_pred CCCCccccchh--hhcCCCCCEEECCCCccCcccccc----CCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCC
Confidence 99999997554 899999999999999999654411 235788899999988764 457899999999999997
Q ss_pred CCc-cccccCCCcccCCCccCCC
Q 009972 226 SIP-KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 226 ~ip-~~l~~l~~l~~~~N~l~~~ 247 (521)
..| ..+.+|+.+++++|.+.+.
T Consensus 324 ~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 324 ISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CGGGGGCTTCCEEECCSSCCCCC
T ss_pred chhhccCccCCEeECCCCccCCc
Confidence 766 3456777888999987765
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.6e-15 Score=162.83 Aligned_cols=165 Identities=23% Similarity=0.327 Sum_probs=138.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+|+.|+|++|.+... + .+..+++|+.|+|++|+|++..| +..+++|+.|+|++|.|++ +| .+..+++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 4688999999999874 3 69999999999999999997655 9999999999999999985 44 7999999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCccccC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++ + +.+..+++|+.|+|++|++++. +.. ....+|..+++++|.++++ ..+++|+.|+|++|+|++
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l---~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~- 189 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVL---SRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD- 189 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGG---GSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhh---cccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCC-
Confidence 9999995 4 4699999999999999999854 321 1235788999999998864 568899999999999986
Q ss_pred Ccc--ccccCCCcccCCCccCCC
Q 009972 227 IPK--CLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 227 ip~--~l~~l~~l~~~~N~l~~~ 247 (521)
+|. .+.+|..|++++|.+...
T Consensus 190 l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 190 LRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CGGGTTCTTCSEEECCSEEEECC
T ss_pred ChHHccCCCCCEEEccCCcCcCC
Confidence 452 345677789999987764
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2e-17 Score=168.78 Aligned_cols=175 Identities=17% Similarity=0.136 Sum_probs=82.7
Q ss_pred CCEEEEEecCC---CCcccCCccc-------cCCCCCCEEEcCCCcccc----cCCcccCCCCCCcEEEccCCCCCCCCC
Q 009972 70 DRVLKINISGS---SLKGFLAPEL-------GLLTYLQELILHGNNLIG----IIPKELGLLKRLKILDLGTNQLTGPIP 135 (521)
Q Consensus 70 ~~l~~L~L~~n---~l~~~~p~~l-------~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (521)
.+++.|+|++| ++++.+|..+ ..+++|++|+|++|.+.+ .+|..+..+++|++|+|++|.+++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 34555555553 3333444333 455555666666655554 345555555555555555555543222
Q ss_pred cccC----CC---------cCCceEecccccCC-CCCc---hhhhCCCCCCEEeCCCCcCC--c---cCCCCCCCccccc
Q 009972 136 PEIG----NL---------TGLVKINLQSNGLT-GRLP---AELGNLISLEELHLDRNRLQ--G---AVPAGSNSGYTAN 193 (521)
Q Consensus 136 ~~~~----~l---------~~L~~L~Ls~N~l~-g~~p---~~~~~l~~L~~L~Ls~N~l~--g---~~p~~~~~~~~~~ 193 (521)
..+. .+ ++|++|+|++|+++ +.+| ..+..+++|++|+|++|+++ | .+|.... ...+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~--~~~~ 217 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLA--YCQE 217 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGG--GCTT
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhh--cCCC
Confidence 2222 22 55555555555554 3333 24445555555555555554 1 1111110 1134
Q ss_pred ccccccccCCCC---------CcccCCCCCEEeccCCccccC----Cccc-----cccCCCcccCCCccCC
Q 009972 194 IHGMYASSANLT---------GLCHLSQLKVADFSYNFFVGS----IPKC-----LEYLPSTSFQGNCLQN 246 (521)
Q Consensus 194 l~~l~l~~n~l~---------~~~~l~~L~~L~ls~N~l~g~----ip~~-----l~~l~~l~~~~N~l~~ 246 (521)
+..+++++|.++ .+..+++|+.|+|++|.+++. +|.. +.+|..+++++|.+..
T Consensus 218 L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 218 LKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred ccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 445555555552 133445555555555555433 2332 2334445555554443
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.4e-16 Score=148.97 Aligned_cols=164 Identities=22% Similarity=0.271 Sum_probs=131.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++. |. +..+++|+.|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECC
Confidence 3556778888888743 6889999999999999998 466 789999999999999999964 44 9999999999999
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCccccCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~i 227 (521)
+|++++ +|. +.. ++|++|+|++|++++ +|.. ....++..+++++|.++++ ..+++|+.|++++|++++.-
T Consensus 94 ~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~~l---~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~~ 166 (263)
T 1xeu_A 94 RNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TDSL---IHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNTG 166 (263)
T ss_dssp SSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SGGG---TTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBCT
T ss_pred CCccCC-cCc-ccc-CcccEEEccCCccCC-Chhh---cCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcchH
Confidence 999995 554 333 999999999999995 4431 1235788899999998764 56889999999999998661
Q ss_pred c-cccccCCCcccCCCccCCC
Q 009972 228 P-KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 228 p-~~l~~l~~l~~~~N~l~~~ 247 (521)
. ..+.+|..+++++|.+...
T Consensus 167 ~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 167 GLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSTTCCCCCEEEEEEEEEECC
T ss_pred HhccCCCCCEEeCCCCcccCC
Confidence 1 2345667788899977664
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.9e-16 Score=153.47 Aligned_cols=157 Identities=17% Similarity=0.138 Sum_probs=121.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccC-CCcCCceEe
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~ 148 (521)
.+++.|++++|.+++..+. .+++|++|+|++|++++..|..+..+++|++|+|++|.+++..|..+. .+++|++|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 5788899999998886543 368899999999999988888899999999999999999977777774 789999999
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC----cccCCCCCEEeccCCccc
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~----~~~l~~L~~L~ls~N~l~ 224 (521)
|++|++++. |. ...+++|++|+|++|++++ +|.... ...++..+++++|.++. +..+++|+.|++++|.++
T Consensus 176 L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~--~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQ--SAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGG--GGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCB
T ss_pred CCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhc--ccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCcc
Confidence 999999954 43 3458999999999999985 443221 23467777777777764 334677888888888877
Q ss_pred -cCCccccccC
Q 009972 225 -GSIPKCLEYL 234 (521)
Q Consensus 225 -g~ip~~l~~l 234 (521)
+.+|..+..+
T Consensus 251 ~~~~~~~~~~~ 261 (317)
T 3o53_A 251 CGTLRDFFSKN 261 (317)
T ss_dssp HHHHHHHHHTC
T ss_pred CcCHHHHHhcc
Confidence 5566555444
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-15 Score=133.90 Aligned_cols=122 Identities=21% Similarity=0.232 Sum_probs=104.5
Q ss_pred CCCCCCEEEcCCCccc-ccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCE
Q 009972 92 LLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEE 170 (521)
Q Consensus 92 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 170 (521)
..++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 78999999999999999999999965 78999999999999999999889999999999999
Q ss_pred EeCCCCcCCccC-CCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCc---cccccCCC
Q 009972 171 LHLDRNRLQGAV-PAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP---KCLEYLPS 236 (521)
Q Consensus 171 L~Ls~N~l~g~~-p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip---~~l~~l~~ 236 (521)
|++++|++++.. | ..+..+++|+.|++++|.+++..+ ..+..++.
T Consensus 93 L~ls~N~i~~~~~~---------------------~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~ 141 (149)
T 2je0_A 93 LNLSGNKIKDLSTI---------------------EPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQ 141 (149)
T ss_dssp EECTTSCCCSHHHH---------------------GGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTT
T ss_pred EECCCCcCCChHHH---------------------HHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCC
Confidence 999999998521 1 135568899999999999997665 34554444
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.61 E-value=3.5e-15 Score=133.82 Aligned_cols=107 Identities=30% Similarity=0.319 Sum_probs=95.8
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccc
Q 009972 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (521)
+.|++++|.++. +|..+ .++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 467888999987 67665 389999999999999988999999999999999999999777777899999999999999
Q ss_pred cCCCCCchhhhCCCCCCEEeCCCCcCCccC
Q 009972 153 GLTGRLPAELGNLISLEELHLDRNRLQGAV 182 (521)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 182 (521)
+|++..|..|.++++|++|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 999777777999999999999999998543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-15 Score=161.72 Aligned_cols=108 Identities=26% Similarity=0.273 Sum_probs=100.6
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..|+.+++|++|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47889999999998 565 999999999999999999 789999999999999999999996 78 89999999999999
Q ss_pred cccCCCCC-chhhhCCCCCCEEeCCCCcCCccCC
Q 009972 151 SNGLTGRL-PAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 151 ~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
+|+|++.. |..|+.+++|+.|+|++|++++.+|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999876 9999999999999999999996655
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.3e-15 Score=142.79 Aligned_cols=169 Identities=20% Similarity=0.179 Sum_probs=146.2
Q ss_pred CCCEEEEEecCCC-CcccCCccccCCCCCCEEEcCC-CcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCc-
Q 009972 69 RDRVLKINISGSS-LKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV- 145 (521)
Q Consensus 69 ~~~l~~L~L~~n~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~- 145 (521)
..+++.|+|++|. +++..+..|..+++|++|+|++ |++++..+..|..+++|++|+|++|++++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3589999999997 8887777899999999999999 99998878889999999999999999995 776 88999998
Q ss_pred --eEecccc-cCCCCCchhhhCCCCCC-EEeCCCCcCCccCCCCCCCcccccccccccccCC-CCC-----cccC-CCCC
Q 009972 146 --KINLQSN-GLTGRLPAELGNLISLE-ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN-LTG-----LCHL-SQLK 214 (521)
Q Consensus 146 --~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~-l~~-----~~~l-~~L~ 214 (521)
+|++++| ++++..+..|.++++|+ +|++++|+++ .+|...+.. ..+..+++++|. ++. +..+ ++|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~--~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~ 208 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG--TKLDAVYLNKNKYLTVIDKDAFGGVYSGPS 208 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT--CEEEEEECTTCTTCCEECTTTTTTCSBCCS
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC--CCCCEEEcCCCCCcccCCHHHhhccccCCc
Confidence 9999999 99977777799999999 9999999999 777755443 578999999994 765 4557 8999
Q ss_pred EEeccCCccccCCccccccCCCcccCCC
Q 009972 215 VADFSYNFFVGSIPKCLEYLPSTSFQGN 242 (521)
Q Consensus 215 ~L~ls~N~l~g~ip~~l~~l~~l~~~~N 242 (521)
.|++++|++++..+..+.+++.+.+.++
T Consensus 209 ~L~l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 209 LLDVSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp EEECTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred EEECCCCccccCChhHhccCceeeccCc
Confidence 9999999999554456888888888765
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.59 E-value=8.7e-17 Score=163.96 Aligned_cols=177 Identities=23% Similarity=0.271 Sum_probs=139.9
Q ss_pred CCEEEEEecCCCCcccCC----ccccCCCCCCEEEcCCC---cccccCCccc-------CCCCCCcEEEccCCCCCC---
Q 009972 70 DRVLKINISGSSLKGFLA----PELGLLTYLQELILHGN---NLIGIIPKEL-------GLLKRLKILDLGTNQLTG--- 132 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p----~~l~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~Ls~N~l~g--- 132 (521)
.+++.|+|++|.+++..+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 469999999999987643 45778999999999995 5566677665 789999999999999997
Q ss_pred -CCCcccCCCcCCceEecccccCCCCCchhhh----CC---------CCCCEEeCCCCcCC-ccCCCCC-CCcccccccc
Q 009972 133 -PIPPEIGNLTGLVKINLQSNGLTGRLPAELG----NL---------ISLEELHLDRNRLQ-GAVPAGS-NSGYTANIHG 196 (521)
Q Consensus 133 -~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l---------~~L~~L~Ls~N~l~-g~~p~~~-~~~~~~~l~~ 196 (521)
.+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+|... ......++..
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4788899999999999999999755444444 34 89999999999997 3444200 0001237888
Q ss_pred cccccCCCC----------CcccCCCCCEEeccCCccc----cCCcccc---ccCCCcccCCCccCC
Q 009972 197 MYASSANLT----------GLCHLSQLKVADFSYNFFV----GSIPKCL---EYLPSTSFQGNCLQN 246 (521)
Q Consensus 197 l~l~~n~l~----------~~~~l~~L~~L~ls~N~l~----g~ip~~l---~~l~~l~~~~N~l~~ 246 (521)
+++++|.++ .+..+++|+.|+|++|.++ +.+|..+ .+|..+++++|.+..
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCch
Confidence 999999998 5667899999999999996 5677655 456778899997665
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.8e-16 Score=160.21 Aligned_cols=177 Identities=20% Similarity=0.205 Sum_probs=114.8
Q ss_pred CCEEEEEecCCCCcccCC----ccccCCC-CCCEEEcCCCcccccCCcccCCC-----CCCcEEEccCCCCCCCCCcccC
Q 009972 70 DRVLKINISGSSLKGFLA----PELGLLT-YLQELILHGNNLIGIIPKELGLL-----KRLKILDLGTNQLTGPIPPEIG 139 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~ 139 (521)
.+++.|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 357788888888877655 5667777 78888888888877666666654 7788888888888766665443
Q ss_pred C----C-cCCceEecccccCCCCCchhhh----C-CCCCCEEeCCCCcCCccCCCCCCC---cccccccccccccCCCCC
Q 009972 140 N----L-TGLVKINLQSNGLTGRLPAELG----N-LISLEELHLDRNRLQGAVPAGSNS---GYTANIHGMYASSANLTG 206 (521)
Q Consensus 140 ~----l-~~L~~L~Ls~N~l~g~~p~~~~----~-l~~L~~L~Ls~N~l~g~~p~~~~~---~~~~~l~~l~l~~n~l~~ 206 (521)
. + ++|++|+|++|++++..+..+. . .++|++|+|++|++++..+..... .....+..+++++|.++.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 3 3 7788888888888766555543 3 257888888888777422211000 011256777777777754
Q ss_pred cc---------cC-CCCCEEeccCCccccC----Ccccc----ccCCCcccCCCccCC
Q 009972 207 LC---------HL-SQLKVADFSYNFFVGS----IPKCL----EYLPSTSFQGNCLQN 246 (521)
Q Consensus 207 ~~---------~l-~~L~~L~ls~N~l~g~----ip~~l----~~l~~l~~~~N~l~~ 246 (521)
.. .. ++|+.|||++|.+++. +|..+ .+++.+++++|.+..
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 22 23 4777788887777653 33333 256677777776655
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=156.55 Aligned_cols=73 Identities=32% Similarity=0.384 Sum_probs=31.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.|++ +|. .+++|++|+|++|++++ +|. .+++|+.|+|++|++++ +|.. +++|++|+|+
T Consensus 82 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 82 ELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVS 149 (622)
T ss_dssp TCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECc
Confidence 34444444444443 222 33444444444444442 222 23344444444444442 3322 2455555555
Q ss_pred cccCC
Q 009972 151 SNGLT 155 (521)
Q Consensus 151 ~N~l~ 155 (521)
+|+++
T Consensus 150 ~N~l~ 154 (622)
T 3g06_A 150 DNQLA 154 (622)
T ss_dssp SSCCS
T ss_pred CCcCC
Confidence 55555
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.58 E-value=9.1e-17 Score=160.37 Aligned_cols=170 Identities=21% Similarity=0.195 Sum_probs=117.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCccccc-CCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4677777777777775444 56678888888888887765 777777888888888888888777777788888888888
Q ss_pred cccc-cCCC-CCchhhhCCCCCCEEeCCCC-cCCcc-CCCCCCCcccc-cccccccccC--CCCC------cccCCCCCE
Q 009972 149 LQSN-GLTG-RLPAELGNLISLEELHLDRN-RLQGA-VPAGSNSGYTA-NIHGMYASSA--NLTG------LCHLSQLKV 215 (521)
Q Consensus 149 Ls~N-~l~g-~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~~~~~-~l~~l~l~~n--~l~~------~~~l~~L~~ 215 (521)
|++| .+++ .+|..+.++++|++|++++| .+++. ++.... ... ++..+++++| .++. +..+++|+.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~--~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~ 226 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA--HVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVH 226 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHH--HSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHH--hcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCE
Confidence 8888 5765 36666777888888888888 77643 222110 113 6677777777 3331 245777888
Q ss_pred EeccCCc-cccCCcccc---ccCCCcccCCC
Q 009972 216 ADFSYNF-FVGSIPKCL---EYLPSTSFQGN 242 (521)
Q Consensus 216 L~ls~N~-l~g~ip~~l---~~l~~l~~~~N 242 (521)
|++++|. +++..+..+ .+|+.+++++|
T Consensus 227 L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 227 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred EeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 8888887 665555544 34555666666
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.2e-16 Score=161.48 Aligned_cols=172 Identities=17% Similarity=0.138 Sum_probs=100.2
Q ss_pred EEecCCCCcccCCccccCCCCCCEEEcCCCcccccCC----cccCCCC-CCcEEEccCCCCCCCCCcccCCC-----cCC
Q 009972 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP----KELGLLK-RLKILDLGTNQLTGPIPPEIGNL-----TGL 144 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~L 144 (521)
.+|+.|+++|.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566667766666655555667777777777665544 5556666 67777777777766555555554 667
Q ss_pred ceEecccccCCCCCchhhh----CC-CCCCEEeCCCCcCCccCCCCCCCc---ccccccccccccCCCCC-----c----
Q 009972 145 VKINLQSNGLTGRLPAELG----NL-ISLEELHLDRNRLQGAVPAGSNSG---YTANIHGMYASSANLTG-----L---- 207 (521)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~~~----~l-~~L~~L~Ls~N~l~g~~p~~~~~~---~~~~l~~l~l~~n~l~~-----~---- 207 (521)
++|+|++|++++..+..++ .+ ++|++|+|++|++++..+...... ....+..+++++|.++. +
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 7777777776655555433 33 667777777777654332211000 01356666666666652 1
Q ss_pred ccCC-CCCEEeccCCccccCCcccc--------ccCCCcccCCCccCC
Q 009972 208 CHLS-QLKVADFSYNFFVGSIPKCL--------EYLPSTSFQGNCLQN 246 (521)
Q Consensus 208 ~~l~-~L~~L~ls~N~l~g~ip~~l--------~~l~~l~~~~N~l~~ 246 (521)
..++ +|+.|+|++|++++..+..+ .+++.+++++|.+..
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 1232 67777777777665554322 255666666666554
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.58 E-value=7.7e-15 Score=132.13 Aligned_cols=105 Identities=25% Similarity=0.269 Sum_probs=94.3
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccc
Q 009972 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (521)
+.+++++|+++. +|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 578999999965 677664 89999999999999988999999999999999999999766666899999999999999
Q ss_pred cCCCCCchhhhCCCCCCEEeCCCCcCCc
Q 009972 153 GLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
+|++..+..|..+++|++|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 9997666669999999999999999984
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.4e-15 Score=135.68 Aligned_cols=132 Identities=23% Similarity=0.248 Sum_probs=108.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCC-CCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLT-YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|+|++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 478999999999996 454 55555 999999999999975 6799999999999999999965445558999999999
Q ss_pred cccccCCCCCch--hhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccc
Q 009972 149 LQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 149 Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~ 224 (521)
|++|+++ .+|. .+..+++|++|++++|.++ .+|... ...+..+++|+.||+++|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~-----------------~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYR-----------------LYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHH-----------------HHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHH-----------------HHHHHHCCccceeCCCcCCHH
Confidence 9999997 6776 8999999999999999997 444310 001445788999999999765
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.57 E-value=4.4e-16 Score=155.38 Aligned_cols=171 Identities=19% Similarity=0.193 Sum_probs=131.7
Q ss_pred CCEEEEEecCCCCccc-CCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCC-CCCCC-CCcccCCCcCCce
Q 009972 70 DRVLKINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGP-IPPEIGNLTGLVK 146 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~ 146 (521)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++. +|..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5799999999999876 7888899999999999999999888888999999999999999 67753 6777888999999
Q ss_pred Eecccc-cCCCC-CchhhhCCC-CCCEEeCCCC--cCC-ccCCCCCCCcccccccccccccCC-CC-----CcccCCCCC
Q 009972 147 INLQSN-GLTGR-LPAELGNLI-SLEELHLDRN--RLQ-GAVPAGSNSGYTANIHGMYASSAN-LT-----GLCHLSQLK 214 (521)
Q Consensus 147 L~Ls~N-~l~g~-~p~~~~~l~-~L~~L~Ls~N--~l~-g~~p~~~~~~~~~~l~~l~l~~n~-l~-----~~~~l~~L~ 214 (521)
|+|++| .+++. +|..+..++ +|++|++++| .++ +.+|.... ...++..+++++|. ++ .+..+++|+
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~--~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~ 250 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR--RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 250 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH--HCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHh--hCCCCCEEeCCCCCcCCHHHHHHHhCCCCCC
Confidence 999999 88864 677888999 9999999999 455 33333110 12467788888887 44 255678899
Q ss_pred EEeccCCc-cccCCc---cccccCCCcccCCC
Q 009972 215 VADFSYNF-FVGSIP---KCLEYLPSTSFQGN 242 (521)
Q Consensus 215 ~L~ls~N~-l~g~ip---~~l~~l~~l~~~~N 242 (521)
.|++++|. ++.... ..+.+|+.+++.+|
T Consensus 251 ~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 251 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 99999885 222111 12455667778877
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.53 E-value=5.6e-14 Score=125.93 Aligned_cols=109 Identities=25% Similarity=0.314 Sum_probs=93.9
Q ss_pred CCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCC
Q 009972 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (521)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 175 (521)
.+.|++++|.++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999984 777664 8999999999999988899999999999999999999977777789999999999999
Q ss_pred CcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCc
Q 009972 176 NRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 176 N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|+|++ +|.. .+..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~-~~~~--------------------~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKS-IPRG--------------------AFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCC-CCTT--------------------TTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCE-eCHH--------------------HhcCCCCCCEEEeCCCCCCCCch
Confidence 99995 4432 24457889999999999986543
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.52 E-value=3.7e-17 Score=150.65 Aligned_cols=134 Identities=22% Similarity=0.302 Sum_probs=110.7
Q ss_pred CEEEEEecCCCCcccCCc------cccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCC
Q 009972 71 RVLKINISGSSLKGFLAP------ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~------~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 144 (521)
+++.++++.+.++|.+|. .+..+++|++|+|++|++++ +| .+..+++|++|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455566666667666665 89999999999999999986 67 8999999999999999998 788888888999
Q ss_pred ceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccc
Q 009972 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~ 224 (521)
+.|+|++|++++ +| .+..+++|++|++++|++++. |. +..+..+++|++|++++|.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~-~~-------------------~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNW-GE-------------------IDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCH-HH-------------------HHHHTTTTTCSEEEECSCHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCch-hH-------------------HHHHhcCCCCCEEEecCCccc
Confidence 999999999995 56 688999999999999999732 21 012455788999999999998
Q ss_pred cCCcc
Q 009972 225 GSIPK 229 (521)
Q Consensus 225 g~ip~ 229 (521)
+.+|.
T Consensus 154 ~~~~~ 158 (198)
T 1ds9_A 154 NDYKE 158 (198)
T ss_dssp HHHHT
T ss_pred ccccc
Confidence 77664
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.8e-14 Score=141.68 Aligned_cols=171 Identities=19% Similarity=0.147 Sum_probs=136.0
Q ss_pred CCCEEEEEecCCCCcccCCc-cccCCCCCCE-EEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCce
Q 009972 69 RDRVLKINISGSSLKGFLAP-ELGLLTYLQE-LILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~-~l~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 146 (521)
-.+++.|+|++|.+.+.+|+ .|.++++|++ ++++.|++++..|..|..+++|++|++++|++++..+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 45899999999999887765 5789998875 677789999888999999999999999999999777777778888999
Q ss_pred Eeccc-ccCCCCCchhhhCCC-CCCEEeCCCCcCCccCCCCCCCccccccccccccc-CCCCC-----cccCCCCCEEec
Q 009972 147 INLQS-NGLTGRLPAELGNLI-SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS-ANLTG-----LCHLSQLKVADF 218 (521)
Q Consensus 147 L~Ls~-N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~-n~l~~-----~~~l~~L~~L~l 218 (521)
|++++ |++....+..|..+. .|+.|+|++|+|+ .+|...+.. ..+..++++. |.++. +..+++|+.||+
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~--~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdL 209 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNG--TQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTT--EEEEEEECTTCTTCCCCCTTTTTTEECCSEEEC
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccc--cchhHHhhccCCcccCCCHHHhccCcccchhhc
Confidence 99976 567755555677764 6899999999999 566654432 4677778764 66654 456789999999
Q ss_pred cCCccccCCccccccCCCcccCCC
Q 009972 219 SYNFFVGSIPKCLEYLPSTSFQGN 242 (521)
Q Consensus 219 s~N~l~g~ip~~l~~l~~l~~~~N 242 (521)
++|+|+...+..+.+++.|...++
T Consensus 210 s~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 210 SRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp TTSCCCCCCSSSCTTCCEEECTTC
T ss_pred CCCCcCccChhhhccchHhhhccC
Confidence 999999444456788888876655
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.51 E-value=9.4e-14 Score=124.96 Aligned_cols=106 Identities=24% Similarity=0.276 Sum_probs=91.7
Q ss_pred CEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCC
Q 009972 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 78999999997 6787665 89999999999999888999999999999999999999766666799999999999999
Q ss_pred cCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccC
Q 009972 177 RLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 177 ~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ 226 (521)
+|++ +|.. .+..+++|+.|+|++|.+...
T Consensus 92 ~l~~-l~~~--------------------~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKS-IPRG--------------------AFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCC-CCTT--------------------TTTTCTTCSEEECCSSCBCTT
T ss_pred ccce-eCHH--------------------HhccccCCCEEEeCCCCcccc
Confidence 9994 4432 244578899999999999843
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.7e-14 Score=150.51 Aligned_cols=102 Identities=22% Similarity=0.291 Sum_probs=46.7
Q ss_pred CcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCccccccccccc
Q 009972 120 LKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199 (521)
Q Consensus 120 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l 199 (521)
|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +|. .. ...+|..+++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~-l~--~l~~L~~L~L 515 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDG-VA--NLPRLQELLL 515 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGG-GT--TCSSCCEEEC
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Ccc-cC--CCCCCcEEEC
Confidence 4455555555542 343 455555555555555555 445555555555555555555543 331 00 0011222222
Q ss_pred ccCCCC------CcccCCCCCEEeccCCccccCCc
Q 009972 200 SSANLT------GLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 200 ~~n~l~------~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
++|.++ .+..+++|+.|+|++|+|++..|
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 222221 22345667777777777665544
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.50 E-value=5.1e-14 Score=141.22 Aligned_cols=108 Identities=25% Similarity=0.260 Sum_probs=94.4
Q ss_pred CCccceeeCCCCCCEEEEEecCC-CCcccCCccccCCCCCCEEEcCC-CcccccCCcccCCCCCCcEEEccCCCCCCCCC
Q 009972 58 CHWTGIACSDARDRVLKINISGS-SLKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135 (521)
Q Consensus 58 c~w~gv~C~~~~~~l~~L~L~~n-~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (521)
|.|..|.|. ++ +|++ +|. |..+++|++|+|++ |+|++..|..|..|++|++|+|++|+|++..|
T Consensus 8 C~~~~v~~~------------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRCT------------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEECC------------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEcC------------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 777666664 44 6776 777 99999999999996 99998888999999999999999999999999
Q ss_pred cccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCc
Q 009972 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
..|.+|++|+.|+|++|+|++..|..|..++ |+.|+|++|.|..
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9999999999999999999965555566665 9999999999973
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.49 E-value=5.3e-14 Score=126.80 Aligned_cols=132 Identities=20% Similarity=0.156 Sum_probs=105.5
Q ss_pred ccccCCCCCCEEEcCCCcccccCCcccCCC-CCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCC
Q 009972 88 PELGLLTYLQELILHGNNLIGIIPKELGLL-KRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI 166 (521)
Q Consensus 88 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 166 (521)
+.+..+.+|++|+|++|+++. +|. +..+ ++|++|+|++|++++. ..+..+++|++|+|++|++++..|..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 457788999999999999994 565 4444 4999999999999964 6899999999999999999965555569999
Q ss_pred CCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccCCccc----c---ccCCCccc
Q 009972 167 SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC----L---EYLPSTSF 239 (521)
Q Consensus 167 ~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~~----l---~~l~~l~~ 239 (521)
+|++|+|++|+++ .+|. +..+..+++|+.|++++|.++ .+|.. + .++..+++
T Consensus 89 ~L~~L~L~~N~i~-~~~~-------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGD-------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp TCCEEECCSCCCC-CGGG-------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CCCEEECCCCcCC-cchh-------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 9999999999996 4442 013556889999999999998 55653 4 45556677
Q ss_pred CCCcc
Q 009972 240 QGNCL 244 (521)
Q Consensus 240 ~~N~l 244 (521)
++|..
T Consensus 148 ~~n~~ 152 (176)
T 1a9n_A 148 QKVKL 152 (176)
T ss_dssp EECCH
T ss_pred CcCCH
Confidence 77743
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.40 E-value=4.6e-15 Score=154.59 Aligned_cols=109 Identities=23% Similarity=0.231 Sum_probs=48.7
Q ss_pred CEEEEEecCCCCcc----cCCccccCCCCCCEEEcCCCcccccCCccc-CCCC----CCcEEEccCCCCCC----CCCcc
Q 009972 71 RVLKINISGSSLKG----FLAPELGLLTYLQELILHGNNLIGIIPKEL-GLLK----RLKILDLGTNQLTG----PIPPE 137 (521)
Q Consensus 71 ~l~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~----~L~~L~Ls~N~l~g----~~p~~ 137 (521)
+++.|+|++|.++. .++..+..+++|++|+|++|.+....+..+ ..++ +|++|+|++|+++. .+|..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 34455555555442 233444444555555555555443222221 1222 35555555555542 33444
Q ss_pred cCCCcCCceEecccccCCCCCchhhh-----CCCCCCEEeCCCCcCC
Q 009972 138 IGNLTGLVKINLQSNGLTGRLPAELG-----NLISLEELHLDRNRLQ 179 (521)
Q Consensus 138 ~~~l~~L~~L~Ls~N~l~g~~p~~~~-----~l~~L~~L~Ls~N~l~ 179 (521)
+..+++|++|+|++|.+++..+..+. ..++|++|+|++|+++
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 155 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLS 155 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCB
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCC
Confidence 55555555555555554433232222 1334555555555544
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.40 E-value=7.3e-15 Score=153.07 Aligned_cols=175 Identities=19% Similarity=0.169 Sum_probs=113.7
Q ss_pred CCEEEEEecCCCCccc----CCccccCCCCCCEEEcCCCcccccCCcccC-----CCCCCcEEEccCCCCCCC----CCc
Q 009972 70 DRVLKINISGSSLKGF----LAPELGLLTYLQELILHGNNLIGIIPKELG-----LLKRLKILDLGTNQLTGP----IPP 136 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~g~----~p~ 136 (521)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+....+..+. .+++|++|+|++|.+++. +|.
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 4688899999988863 355667788888888888888755444443 356888888888888753 566
Q ss_pred ccCCCcCCceEecccccCCCCC-----chhhhCCCCCCEEeCCCCcCCcc----CCCCCCCcccccccccccccCCCCC-
Q 009972 137 EIGNLTGLVKINLQSNGLTGRL-----PAELGNLISLEELHLDRNRLQGA----VPAGSNSGYTANIHGMYASSANLTG- 206 (521)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~~~~~~l~~l~l~~n~l~~- 206 (521)
.+..+++|++|+|++|.+++.. +..+..+++|++|++++|++++. ++.... ....+..+++++|.++.
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~--~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLR--AKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHH--HCTTCCEEECTTCCCHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHh--hCCCcceEECCCCCCchH
Confidence 6777788888888888776432 22223577888888888877742 222100 01356667777776642
Q ss_pred ----cc-----cCCCCCEEeccCCccccC----Ccccc---ccCCCcccCCCccCC
Q 009972 207 ----LC-----HLSQLKVADFSYNFFVGS----IPKCL---EYLPSTSFQGNCLQN 246 (521)
Q Consensus 207 ----~~-----~l~~L~~L~ls~N~l~g~----ip~~l---~~l~~l~~~~N~l~~ 246 (521)
+. +.++|+.|++++|.+++. +|..+ .+++.+++++|.+.+
T Consensus 300 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 300 GARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred HHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 11 225777777777777654 33332 456666777775544
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.35 E-value=2.5e-12 Score=128.85 Aligned_cols=105 Identities=20% Similarity=0.131 Sum_probs=89.2
Q ss_pred CEEEcCCC-cccccCCcccCCCCCCcEEEccC-CCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCC
Q 009972 97 QELILHGN-NLIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174 (521)
Q Consensus 97 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 174 (521)
..++++++ +|++ +|. |..+++|++|+|++ |+|++..|..|++|++|+.|+|++|+|++..|..|.+|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789988 8984 788 99999999999996 99998888899999999999999999999999999999999999999
Q ss_pred CCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCcccc
Q 009972 175 RNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 175 ~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g 225 (521)
+|+|++ +|...+. .++ |+.|+|++|.|..
T Consensus 89 ~N~l~~-~~~~~~~--------------------~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALES-LSWKTVQ--------------------GLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSC-CCSTTTC--------------------SCC-CCEEECCSSCCCC
T ss_pred CCccce-eCHHHcc--------------------cCC-ceEEEeeCCCccC
Confidence 999994 5543221 122 7888888888764
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.3e-14 Score=133.50 Aligned_cols=110 Identities=22% Similarity=0.229 Sum_probs=98.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 579999999999998 66 8999999999999999998 678888888999999999999995 56 6889999999999
Q ss_pred ccccCCCCCc-hhhhCCCCCCEEeCCCCcCCccCCC
Q 009972 150 QSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPA 184 (521)
Q Consensus 150 s~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~ 184 (521)
++|++++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999995322 4799999999999999999877664
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=2.3e-11 Score=116.63 Aligned_cols=137 Identities=15% Similarity=0.063 Sum_probs=104.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..++.|+.+.||++... ++.+++|........ ....+.+|+++++.+. |..+.++++++...+ ..++||||+
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv~e~i 92 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLLMSEA 92 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEECC
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCC----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEEEEec
Confidence 56777788899999764 578999987432111 1234889999999884 677889999988765 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL---------------------------------------- 482 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------- 482 (521)
++.+|.+.+. +..+...++.+++++|+.||+..
T Consensus 93 ~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T 3tm0_A 93 DGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp SSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred CCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence 9999987642 11234578899999999999810
Q ss_pred ----------------CCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 483 ----------------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 483 ----------------~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
.+.++|+|++|.||+++++..+.|.||+.+..
T Consensus 166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13589999999999998876678999998754
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.19 E-value=9.2e-11 Score=112.00 Aligned_cols=132 Identities=14% Similarity=0.069 Sum_probs=97.7
Q ss_pred hhC-cCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCc--cceeeeEeecCCCCceEEEEee
Q 009972 365 IIG-SSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--TGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~lg-~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lv~ey 441 (521)
.++ .|..+.||++...+|..+++|..... ....+.+|+++++.+++.+ +.+++++....+ ..++||||
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e~ 96 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGE 96 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEEC
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEEe
Confidence 344 55569999998877888999986322 1124788999999886555 456888877655 68999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL--------------------------------------- 482 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------- 482 (521)
+++.++. .. . .+ ...++.++++.|+.||+..
T Consensus 97 i~G~~l~--~~-~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 97 VPGQDLL--SS-H----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CSSEETT--TS-C----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred cCCcccC--cC-c----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 9998884 21 1 11 2367788888888888742
Q ss_pred ----------------CCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 483 ----------------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 483 ----------------~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
.+.++|+|++|.||+++++..+.|.|||.+..-
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 113999999999999988777789999997654
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.15 E-value=9.7e-11 Score=116.37 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=53.5
Q ss_pred CCEEEEEecCCCCc--------------------ccCCccccC--------CCCCCEEEcCCCcccccCCcccCCCCCCc
Q 009972 70 DRVLKINISGSSLK--------------------GFLAPELGL--------LTYLQELILHGNNLIGIIPKELGLLKRLK 121 (521)
Q Consensus 70 ~~l~~L~L~~n~l~--------------------~~~p~~l~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 121 (521)
.+++.|||++|.+. ...+..|.+ +++|+.|+|.+ +++.+-+..|.+|++|+
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~ 127 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLK 127 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCC
T ss_pred ccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccc
Confidence 46788888888877 112234566 88888888888 77766677788888888
Q ss_pred EEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 122 ILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 122 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.|+|++|.++...+..|.++.++..+.+
T Consensus 128 ~l~l~~n~i~~i~~~aF~~~~~l~~l~~ 155 (329)
T 3sb4_A 128 ICQIRKKTAPNLLPEALADSVTAIFIPL 155 (329)
T ss_dssp EEEBCCSSCCEECTTSSCTTTCEEEECT
T ss_pred eEEcCCCCccccchhhhcCCCceEEecC
Confidence 8888888875444444554444444443
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=6.9e-13 Score=134.10 Aligned_cols=160 Identities=19% Similarity=0.136 Sum_probs=104.1
Q ss_pred CCEEEEEecCCCCcccCCccccC-----CCCCCEEEcCCCcccccCCccc-CCCCCCcEEEccCCCCCCCCCccc-----
Q 009972 70 DRVLKINISGSSLKGFLAPELGL-----LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI----- 138 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~-----l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~----- 138 (521)
..++.|+|++|.++......+.. .++|++|+|++|.++..-...+ ..+++|+.|+|++|.|+..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 46889999999998644443332 3789999999999875433333 346789999999999874433333
Q ss_pred CCCcCCceEecccccCCC----CCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCC
Q 009972 139 GNLTGLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLK 214 (521)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~ 214 (521)
...++|+.|+|++|.++. .++..+..+++|++|+|++|.++..-..... ..+...++|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~-----------------~~L~~~~~L~ 214 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA-----------------AQLDRNRQLQ 214 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH-----------------HHGGGCSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH-----------------HHHhcCCCcC
Confidence 346789999999999874 3555667889999999999998732100000 0122344566
Q ss_pred EEeccCCccccC----Ccccc---ccCCCcccCCCccCC
Q 009972 215 VADFSYNFFVGS----IPKCL---EYLPSTSFQGNCLQN 246 (521)
Q Consensus 215 ~L~ls~N~l~g~----ip~~l---~~l~~l~~~~N~l~~ 246 (521)
.|||++|.++.. ++..+ .+|..+++++|.+..
T Consensus 215 ~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 215 ELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp EEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred eEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 677777766532 22222 455666666665443
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.8e-10 Score=113.51 Aligned_cols=143 Identities=13% Similarity=0.097 Sum_probs=105.3
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEee--eeccccchhhHHHHHHHHHHHhccC--CCccceeeeEeecCCC-CceEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLC--IKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSP-FTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~--~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~-~~~~lv 438 (521)
+.++.|.++.||+....+ ..+++|+.. ..... .....+.+|.+++..++ +..+.++++++.+.+. +..++|
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~---~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL---PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC---CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 568899999999998765 567787653 21111 12345788999999886 4567889998876531 247999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL------------------------------------ 482 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------ 482 (521)
|||+++..+.+... ..++..++..++.++++.|+.||+..
T Consensus 120 me~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 120 MEFVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp EECCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EEecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99999987754221 23678899999999999999999731
Q ss_pred -------------------CCCeeecCCCCCCeeecCCCC--eeeCCCchhhh
Q 009972 483 -------------------GPPFTISELNSSAVYLTEDFS--PKVSPLCLSFL 514 (521)
Q Consensus 483 -------------------~~~ivH~dlk~~NILld~~~~--~kl~DfGla~~ 514 (521)
.+.++|||+++.|||+++++. +.|.||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247899999999999997753 68999998875
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-11 Score=125.39 Aligned_cols=146 Identities=19% Similarity=0.180 Sum_probs=106.9
Q ss_pred CCEEEEEecCCCCcccCCccc-cCCCCCCEEEcCCCcccccCCccc-----CCCCCCcEEEccCCCCCC----CCCcccC
Q 009972 70 DRVLKINISGSSLKGFLAPEL-GLLTYLQELILHGNNLIGIIPKEL-----GLLKRLKILDLGTNQLTG----PIPPEIG 139 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~g----~~p~~~~ 139 (521)
.+++.|+|++|.++..-...+ ..+++|++|+|++|.|+..-...+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999975433333 346789999999999975544443 356899999999999963 2445567
Q ss_pred CCcCCceEecccccCCCC----CchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCE
Q 009972 140 NLTGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKV 215 (521)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~ 215 (521)
.+++|++|+|++|.++.. ++..+...++|++|+|++|.++..-..... ..+...++|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~-----------------~~L~~~~~L~~ 243 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA-----------------RAAREHPSLEL 243 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH-----------------HHHHHCSSCCE
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH-----------------HHHHhCCCCCE
Confidence 789999999999999842 356677889999999999999742110000 11334578999
Q ss_pred EeccCCccccCCccccc
Q 009972 216 ADFSYNFFVGSIPKCLE 232 (521)
Q Consensus 216 L~ls~N~l~g~ip~~l~ 232 (521)
|||++|.|+..-...+.
T Consensus 244 L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 244 LHLYFNELSSEGRQVLR 260 (372)
T ss_dssp EECTTSSCCHHHHHHHH
T ss_pred EeccCCCCCHHHHHHHH
Confidence 99999998755444443
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.1e-10 Score=111.41 Aligned_cols=127 Identities=22% Similarity=0.155 Sum_probs=85.1
Q ss_pred CCCCccceeeCCCCCCEEEEEecC---CCCcccCCc-c-----------------------ccCCCCCCE--EEcCCCcc
Q 009972 56 DPCHWTGIACSDARDRVLKINISG---SSLKGFLAP-E-----------------------LGLLTYLQE--LILHGNNL 106 (521)
Q Consensus 56 ~~c~w~gv~C~~~~~~l~~L~L~~---n~l~~~~p~-~-----------------------l~~l~~L~~--L~L~~N~l 106 (521)
..|.|.|+.|+....+|..+...+ ..+.+.+++ . +...+.|.. ++++.|+.
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 368999999986445665555544 222222321 1 222233333 55666643
Q ss_pred c---ccCCcccCCCCCCcEEEccCCCCCC--CCCcccCCCcCCceEecccccCCCCCchhhhCCC--CCCEEeCCCCcCC
Q 009972 107 I---GIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI--SLEELHLDRNRLQ 179 (521)
Q Consensus 107 ~---~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~Ls~N~l~ 179 (521)
. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.++
T Consensus 156 ~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 156 SCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 2 2222223568899999999999997 4567778899999999999999964 3455454 9999999999999
Q ss_pred ccCCC
Q 009972 180 GAVPA 184 (521)
Q Consensus 180 g~~p~ 184 (521)
+.+|.
T Consensus 234 ~~~~~ 238 (267)
T 3rw6_A 234 DTFRD 238 (267)
T ss_dssp GGCSS
T ss_pred cccCc
Confidence 87763
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.4e-10 Score=124.46 Aligned_cols=111 Identities=12% Similarity=0.079 Sum_probs=66.6
Q ss_pred CCEEEEEecCCCCcccCCccccCC--CCCCEEEcCCCc-ccc-cCCcccCCCCCCcEEEccCCCCCCC----CCcccCCC
Q 009972 70 DRVLKINISGSSLKGFLAPELGLL--TYLQELILHGNN-LIG-IIPKELGLLKRLKILDLGTNQLTGP----IPPEIGNL 141 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l--~~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l 141 (521)
.+++.|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+..+
T Consensus 112 ~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~ 191 (592)
T 3ogk_B 112 RQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHN 191 (592)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHC
T ss_pred CCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcC
Confidence 367778888777766555555443 337777776665 111 1222233567777777777776544 33344556
Q ss_pred cCCceEecccccCC----CCCchhhhCCCCCCEEeCCCCcCCc
Q 009972 142 TGLVKINLQSNGLT----GRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 142 ~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
++|+.|+|++|.++ +.++..+.++++|++|++++|.+.+
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~ 234 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE 234 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH
Confidence 67777777777776 2344445566777777777776653
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.8e-08 Score=99.90 Aligned_cols=164 Identities=11% Similarity=0.070 Sum_probs=119.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCC----CCCCCccc-------
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL----TGPIPPEI------- 138 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l----~g~~p~~~------- 138 (521)
.+++.|+|++ .++..-+..|.++++|+.|+|++|.+....+..|..+.++..+.++.+.. ...-+..|
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 3789999999 88887777899999999999999999877788888888888777665221 00000000
Q ss_pred -------------------------------------------CCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCC
Q 009972 139 -------------------------------------------GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (521)
Q Consensus 139 -------------------------------------------~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 175 (521)
..+++|+.|+|++|+++...+..|.++++|+.|+|.+
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 0267899999999999866666789999999999998
Q ss_pred CcCCccCCCCCCCccccccc-ccccccCCCC-----CcccCCCCCEEeccCCccccCCccccccCCCcc
Q 009972 176 NRLQGAVPAGSNSGYTANIH-GMYASSANLT-----GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238 (521)
Q Consensus 176 N~l~g~~p~~~~~~~~~~l~-~l~l~~n~l~-----~~~~l~~L~~L~ls~N~l~g~ip~~l~~l~~l~ 238 (521)
| ++ .++...+... .++. .+.+.. .++ .|..+++|+.++++.|+++..-+..|.+++.|.
T Consensus 260 n-i~-~I~~~aF~~~-~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~ 324 (329)
T 3sb4_A 260 N-LK-TIGQRVFSNC-GRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSK 324 (329)
T ss_dssp T-CC-EECTTTTTTC-TTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCC
T ss_pred c-cc-eehHHHhhCC-hhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchh
Confidence 8 66 6776544422 3455 666665 443 366789999999999999855556776665543
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.78 E-value=6.3e-10 Score=119.38 Aligned_cols=105 Identities=11% Similarity=0.101 Sum_probs=82.7
Q ss_pred CEEEEEecCCC-Ccc-cCCccccCCCCCCEEEcCCCccccc----CCcccCCCCCCcEEEccCCCCCC----CCCcccCC
Q 009972 71 RVLKINISGSS-LKG-FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTG----PIPPEIGN 140 (521)
Q Consensus 71 ~l~~L~L~~n~-l~~-~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~ 140 (521)
+++.|+|+++. ++. .++..+..+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999887 221 1233345789999999999998765 44456678999999999999973 34455667
Q ss_pred CcCCceEecccccCCCCCchhhhCCCCCCEEeCCCC
Q 009972 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
+++|+.|+|++|.+.+ +|..+.++++|++|+++.+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 8999999999999985 8888999999999999863
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.72 E-value=2.6e-09 Score=101.91 Aligned_cols=80 Identities=24% Similarity=0.248 Sum_probs=68.0
Q ss_pred cCCCCCCEEEcCCCcccc--cCCcccCCCCCCcEEEccCCCCCCCCCcccCCCc--CCceEecccccCCCCCch------
Q 009972 91 GLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT--GLVKINLQSNGLTGRLPA------ 160 (521)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~Ls~N~l~g~~p~------ 160 (521)
.++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999998 5567788999999999999999964 3455555 999999999999987762
Q ss_pred -hhhCCCCCCEEe
Q 009972 161 -ELGNLISLEELH 172 (521)
Q Consensus 161 -~~~~l~~L~~L~ 172 (521)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 477899999987
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.7e-09 Score=116.10 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=79.4
Q ss_pred CCEEEEEecCCCCcccCCcccc-CCCCCCEEEcCCC-ccccc-CCcccCCCCCCcEEEccCCCCCCCCCcccC----CCc
Q 009972 70 DRVLKINISGSSLKGFLAPELG-LLTYLQELILHGN-NLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIG----NLT 142 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l~ 142 (521)
++++.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4789999999998887666665 6899999999998 55432 445555789999999999998765554443 667
Q ss_pred CCceEeccccc--CCC-CCchhhhCCCCCCEEeCCCC
Q 009972 143 GLVKINLQSNG--LTG-RLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 143 ~L~~L~Ls~N~--l~g-~~p~~~~~l~~L~~L~Ls~N 176 (521)
+|+.|+|++|. ++. .++..+.++++|++|++++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 89999999887 221 12222355789999999888
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.55 E-value=2.1e-07 Score=91.01 Aligned_cols=138 Identities=15% Similarity=0.059 Sum_probs=97.8
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCc--cceeeeEeecCCC-CceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHEN--TGKLLGYCRESSP-FTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~n--iv~l~g~~~~~~~-~~~~lv~ 439 (521)
+.++.|....||+.. ..+++|+-.. ......+.+|.+++..+ .+.. +.+++.+....+. ...|+||
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKH------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESS------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCC------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 457889999999863 4578887421 12345688999999888 3333 3344444433221 1358999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE-------------------------------------- 481 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------- 481 (521)
||+++.++.+... ..++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 96 TKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp ECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 9999988875432 1367778888899999999988861
Q ss_pred -----------------CCCCeeecCCCCCCeeecC--CCCeeeCCCchhhhc
Q 009972 482 -----------------LGPPFTISELNSSAVYLTE--DFSPKVSPLCLSFLL 515 (521)
Q Consensus 482 -----------------~~~~ivH~dlk~~NILld~--~~~~kl~DfGla~~~ 515 (521)
..+.++|+|++|.||++++ ...+.|.||+.+..-
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 1245899999999999998 566889999988754
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.55 E-value=3.1e-09 Score=96.22 Aligned_cols=91 Identities=21% Similarity=0.170 Sum_probs=46.3
Q ss_pred cccCCCCCCEEEcCCC-ccccc----CCcccCCCCCCcEEEccCCCCCCC----CCcccCCCcCCceEecccccCCCC--
Q 009972 89 ELGLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPPEIGNLTGLVKINLQSNGLTGR-- 157 (521)
Q Consensus 89 ~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~-- 157 (521)
.+...+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.++..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3444555555666555 55421 223344455566666666655421 122233345566666666665532
Q ss_pred --CchhhhCCCCCCEEeC--CCCcCC
Q 009972 158 --LPAELGNLISLEELHL--DRNRLQ 179 (521)
Q Consensus 158 --~p~~~~~l~~L~~L~L--s~N~l~ 179 (521)
+...+...++|++|+| ++|.++
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCC
Confidence 3344455556666666 556654
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.53 E-value=1.4e-08 Score=91.88 Aligned_cols=111 Identities=17% Similarity=0.234 Sum_probs=88.7
Q ss_pred CCCEEEEEecCC-CCccc----CCccccCCCCCCEEEcCCCccccc----CCcccCCCCCCcEEEccCCCCCCC----CC
Q 009972 69 RDRVLKINISGS-SLKGF----LAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (521)
Q Consensus 69 ~~~l~~L~L~~n-~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 135 (521)
...++.|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 457999999999 88742 445667789999999999999742 344556678999999999999743 45
Q ss_pred cccCCCcCCceEec--ccccCCCC----CchhhhCCCCCCEEeCCCCcCC
Q 009972 136 PEIGNLTGLVKINL--QSNGLTGR----LPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 136 ~~~~~l~~L~~L~L--s~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
..+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 66778889999999 88999853 3455667799999999999885
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.50 E-value=4.1e-08 Score=98.34 Aligned_cols=174 Identities=16% Similarity=0.116 Sum_probs=94.3
Q ss_pred CCEEEEEecCCCCcc-c-------CCccccCCCCCCEEEcCCCccc---------ccCCcccCCCCCCcEEEccCCCCCC
Q 009972 70 DRVLKINISGSSLKG-F-------LAPELGLLTYLQELILHGNNLI---------GIIPKELGLLKRLKILDLGTNQLTG 132 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~-~-------~p~~l~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~g 132 (521)
.+|+.|.+......| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 356666666555442 1 1233456677777777654321 123344556677888887776311
Q ss_pred CCCcccCCCcCCceEecccccCCCCCchhhh--CCCCCCEEeCCC--CcCCcc--C---CCCCCCcccccccccccccCC
Q 009972 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELG--NLISLEELHLDR--NRLQGA--V---PAGSNSGYTANIHGMYASSAN 203 (521)
Q Consensus 133 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~Ls~--N~l~g~--~---p~~~~~~~~~~l~~l~l~~n~ 203 (521)
.+|. + .+++|+.|+|..|.++......++ .+++|++|+|+. |...|. + .........++|..+.+..|.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2333 3 267777777777776543333444 577777777653 221111 0 000000112456666666665
Q ss_pred CCC-----c---ccCCCCCEEeccCCccccC----Ccc---ccccCCCcccCCCccCC
Q 009972 204 LTG-----L---CHLSQLKVADFSYNFFVGS----IPK---CLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 204 l~~-----~---~~l~~L~~L~ls~N~l~g~----ip~---~l~~l~~l~~~~N~l~~ 246 (521)
+.. + ..+++|+.|||++|.+++. ++. .+.+|+.|+++.|++.+
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 542 1 2356788888888887653 232 24566777777775543
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=8.1e-07 Score=85.10 Aligned_cols=137 Identities=13% Similarity=0.026 Sum_probs=96.0
Q ss_pred hhhCcCCCe-eEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDS-LVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g-~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.+..|..+ .||+.... ++..+.+|.-.. .....+.+|...|+.+. +--+.++++++.+.+ ..++|||
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvme 100 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG-------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLTT 100 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET-------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC-------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEEE
Confidence 345556555 69998776 456788886421 12346788999888773 334667888888766 7899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------------------------------------- 482 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 482 (521)
++++.++.+.... ....+..++.++++.|+-||+..
T Consensus 101 ~l~G~~~~~~~~~------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (272)
T 4gkh_A 101 AIPGKTAFQVLEE------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGW 174 (272)
T ss_dssp CCCSEEHHHHHHH------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTC
T ss_pred eeCCccccccccC------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccch
Confidence 9999887765431 11233456666667777776421
Q ss_pred -----------------CCCeeecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009972 483 -----------------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 483 -----------------~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~ 515 (521)
.+.++|+|+.+.|||+++++.+-|.||+.+..-
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 175 PVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp CHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 123789999999999998887889999987653
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.48 E-value=5.8e-09 Score=111.82 Aligned_cols=154 Identities=10% Similarity=0.003 Sum_probs=106.4
Q ss_pred CCEEEEEec---------CCCCcccCCcccc-CCCCCCEEEcCCCcccccCCcccC-CCCCCcEEEcc--C----CCCCC
Q 009972 70 DRVLKINIS---------GSSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLG--T----NQLTG 132 (521)
Q Consensus 70 ~~l~~L~L~---------~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~g 132 (521)
.+++.|+|+ .+.+++.....+. .+++|++|+++.|++++..+..+. .+++|+.|+|+ + |.++.
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 478899984 3455543333333 488999999999999876666665 58899999999 4 56652
Q ss_pred CC-----CcccCCCcCCceEecccccCCCCCchhhhC-CCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC
Q 009972 133 PI-----PPEIGNLTGLVKINLQSNGLTGRLPAELGN-LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206 (521)
Q Consensus 133 ~~-----p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~ 206 (521)
.. +..+..+++|+.|+|++ .+++..+..++. +++|++|+|++|.+++..+..... ...+++.+++++|.++.
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~-~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLS-GCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHH-HCTTCCEEEEESCSCCH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHh-cCCCcCEEECcCCCCcH
Confidence 21 12256788999999977 677666666665 889999999999987543221100 12467778888887753
Q ss_pred ------cccCCCCCEEeccCCcccc
Q 009972 207 ------LCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 207 ------~~~l~~L~~L~ls~N~l~g 225 (521)
...+++|+.|++++|.++.
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 2346789999999998753
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=2.1e-06 Score=83.93 Aligned_cols=138 Identities=8% Similarity=-0.038 Sum_probs=93.2
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCC---ccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE---NTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.++.|....||+. |..+++|+-. . ......+.+|.+++..+++. .+.+.+.++.... ...++|||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~-g~~~~v~e 93 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--S----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD-GNPFVGYR 93 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--S----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT-SCEEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--C----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC-CceEEEEe
Confidence 45778888899988 4567887631 1 12345789999999999653 3556677765322 25789999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE--------------------------------------- 481 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------------------------------------- 481 (521)
|+++..+.+.... .++..++..++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 94 KVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9999887653211 134445555555555555555542
Q ss_pred ------------------CCCCeeecCCCCCCeeecC---CCC-eeeCCCchhhhcc
Q 009972 482 ------------------LGPPFTISELNSSAVYLTE---DFS-PKVSPLCLSFLLV 516 (521)
Q Consensus 482 ------------------~~~~ivH~dlk~~NILld~---~~~-~kl~DfGla~~~~ 516 (521)
..+.++|+|+++.||++++ ++. +.|.||+.+..-+
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd 226 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence 2335699999999999987 455 4899999876543
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.38 E-value=8.1e-08 Score=96.21 Aligned_cols=171 Identities=20% Similarity=0.196 Sum_probs=101.0
Q ss_pred CCEEEEEecCCCCc---------ccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccC-
Q 009972 70 DRVLKINISGSSLK---------GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG- 139 (521)
Q Consensus 70 ~~l~~L~L~~n~l~---------~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~- 139 (521)
++++.|.+.++... +.++..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHH
Confidence 46777777655331 224455667788888888877311 2333 33 77888888887776532222332
Q ss_pred -CCcCCceEeccc--ccCCCC-----Cchhh--hCCCCCCEEeCCCCcCCccCCCCCC-CcccccccccccccCCCCC--
Q 009972 140 -NLTGLVKINLQS--NGLTGR-----LPAEL--GNLISLEELHLDRNRLQGAVPAGSN-SGYTANIHGMYASSANLTG-- 206 (521)
Q Consensus 140 -~l~~L~~L~Ls~--N~l~g~-----~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~-~~~~~~l~~l~l~~n~l~~-- 206 (521)
.+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.+..+.... ....+++..++++.|.+..
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 678888888753 222111 11122 2467888888888887643221100 0123567788888887754
Q ss_pred -------cccCCCCCEEeccCCccccCCcccccc-C-CCcccCCCc
Q 009972 207 -------LCHLSQLKVADFSYNFFVGSIPKCLEY-L-PSTSFQGNC 243 (521)
Q Consensus 207 -------~~~l~~L~~L~ls~N~l~g~ip~~l~~-l-~~l~~~~N~ 243 (521)
+.++++|+.|++++|.++...-..+.. + -.+++++|.
T Consensus 296 ~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 296 ARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred HHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 245789999999999887443333433 2 345666663
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.36 E-value=2.3e-06 Score=86.96 Aligned_cols=144 Identities=15% Similarity=0.145 Sum_probs=92.4
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.++|..+ ++..-...|.+ .+|+.++|.. .+...-+..|.++++|+.++|++|+++ .+|.......+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeC
Confidence 3666666655 55544455666 4688888875 666566677888888888888888887 444433336788888887
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCC-----CcccCCCCCEEeccCCccc
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-----GLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~-----~~~~l~~L~~L~ls~N~l~ 224 (521)
.| ++..-..+|.++++|+.+++..| ++ .++...+.. ..+..+.+. +.++ .|..+++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~--~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE--SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT--CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc--CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 44 66455667788888888888765 44 455544332 345555553 2232 3556778888888777664
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.34 E-value=3.1e-06 Score=86.00 Aligned_cols=168 Identities=12% Similarity=0.103 Sum_probs=93.8
Q ss_pred EEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccc----------------------cCCcccCCCCCCcEEEccCCC
Q 009972 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG----------------------IIPKELGLLKRLKILDLGTNQ 129 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~----------------------~~p~~~~~l~~L~~L~Ls~N~ 129 (521)
++.++|.. .++..-+..|.++++|+.++|++|+++. .-...|.++++|+.++|..|
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~l~~I~~~aF~~~~~L~~l~l~~~- 236 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVTLKEIGSQAFLKTSQLKTIEIPEN- 236 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCCEECCTT-
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCchheehhhHhhCCCCCCEEecCCC-
Confidence 44555543 4444334445555555555555555443 33344455555555555443
Q ss_pred CCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCC----ccCCCCCCCcccccccccccccCCCC
Q 009972 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ----GAVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 130 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
++..-...|.+ .+|+.++| .|.++..-+.+|.++++|+.+++.+|.+. ..++...+.. ..+|..+.+.. .++
T Consensus 237 l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~-c~~L~~l~l~~-~i~ 312 (401)
T 4fdw_A 237 VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEG-CPKLARFEIPE-SIR 312 (401)
T ss_dssp CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTT-CTTCCEECCCT-TCC
T ss_pred ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhC-CccCCeEEeCC-ceE
Confidence 33222333444 45555555 33455444677889999999999988775 1244433332 23566666663 344
Q ss_pred -----CcccCCCCCEEeccCCccccCCccccc--cCCCcccCCCccCC
Q 009972 206 -----GLCHLSQLKVADFSYNFFVGSIPKCLE--YLPSTSFQGNCLQN 246 (521)
Q Consensus 206 -----~~~~l~~L~~L~ls~N~l~g~ip~~l~--~l~~l~~~~N~l~~ 246 (521)
.|..+.+|+.++|..| ++..-+.+|. +|+.+.+.+|.+..
T Consensus 313 ~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 313 ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTPPQ 359 (401)
T ss_dssp EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSCCB
T ss_pred EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCCcc
Confidence 3566889999999666 4422233333 56777888885544
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=3.4e-06 Score=84.25 Aligned_cols=85 Identities=7% Similarity=-0.032 Sum_probs=53.5
Q ss_pred hhh-CcCCCeeEEEEEeC-------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-C--CccceeeeEeecCCC
Q 009972 364 NII-GSSPDSLVYKGTMK-------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H--ENTGKLLGYCRESSP 432 (521)
Q Consensus 364 ~~l-g~G~~g~Vy~~~~~-------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H--~niv~l~g~~~~~~~ 432 (521)
+.| +.|....+|+.... ++..+++|+-..... ........+.+|..++..++ + -.+.++++++.+.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~-~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAED-VPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGG-CCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCc-cccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 456 78888999998765 256677776432110 00000124678888888774 2 346778888765420
Q ss_pred -CceEEEEeeCCCCChhh
Q 009972 433 -FTRMLVFDYASNGTLYE 449 (521)
Q Consensus 433 -~~~~lv~ey~~~g~L~~ 449 (521)
...++||||+++..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 14689999999876653
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=4.3e-05 Score=77.43 Aligned_cols=78 Identities=10% Similarity=-0.036 Sum_probs=47.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecc---ccchhhHHHHHHHHHHHhccCC--Ccc-ceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE---HWTGYLELYFQREVADLARINH--ENT-GKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~---~~~~~~~~~~~~E~~~l~~l~H--~ni-v~l~g~~~~~~~~~~~ 436 (521)
+.+|.|.++.||+++.. +++.+++|....... ........++..|.+++..+.. +.. .+++.+. .+ ..+
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--~~~ 111 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--MAV 111 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--TTE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--ccE
Confidence 57899999999999875 467899997642211 0000122356778888887742 333 3455442 22 468
Q ss_pred EEEeeCCCC
Q 009972 437 LVFDYASNG 445 (521)
Q Consensus 437 lv~ey~~~g 445 (521)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999864
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.88 E-value=4.7e-05 Score=75.16 Aligned_cols=44 Identities=16% Similarity=0.011 Sum_probs=34.4
Q ss_pred HHHHHHHHhc----------CCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 471 IARGLKYLHT----------ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 471 ia~gL~yLH~----------~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+.+++++|+. ...+.++|+|+.+.|||++.++.+.|.||+.+..
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 3446667763 1245899999999999998888999999998753
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00011 Score=71.73 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=89.0
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC---CCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.|+.|....+|+... ++..+++|..... ....|.+|.+.|+.+. ...+.++++++...+ ..++|||
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lvme 111 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLLLE 111 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEEEE
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEEEE
Confidence 4578899999999886 4567888875321 2456888998888873 356788888887655 7899999
Q ss_pred eCCCCChhh-----------hhhcCCC-C-------------------CCCHHHHH---HHH--HH--------------
Q 009972 441 YASNGTLYE-----------HLHYGER-C-------------------QVSWTRRM---KIV--IG-------------- 470 (521)
Q Consensus 441 y~~~g~L~~-----------~l~~~~~-~-------------------~l~~~~~~---~i~--~~-------------- 470 (521)
|+++..+.. .||.... . .-+|..-. ++. .+
T Consensus 112 ~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~ 191 (312)
T 3jr1_A 112 ALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDL 191 (312)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHH
T ss_pred eccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 999876521 1232111 0 01465322 111 11
Q ss_pred HHHH-HHHHh-cCCCCCeeecCCCCCCeeecCCCCeeeCCCc
Q 009972 471 IARG-LKYLH-TELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 471 ia~g-L~yLH-~~~~~~ivH~dlk~~NILld~~~~~kl~DfG 510 (521)
+... ...|. ....|.++|+|+.+.|+++++++ +.|.||.
T Consensus 192 l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 192 IVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 22342 12357899999999999999887 8999984
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00011 Score=70.85 Aligned_cols=74 Identities=18% Similarity=0.240 Sum_probs=51.0
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCC---ccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE---NTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.+|.|..+.||+.+..||+.+.+|+-..... .....|.+|.+.|+.+.-. -+.+++++. ..++|||
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~----~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~------~~~lv~e 90 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAP----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLAME 90 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCC----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEEEE
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCc----chhhHHHHHHHHHHHHHhhCCCCcceEEecc------CceEEEE
Confidence 45789999999999999999999997532211 1223578899988877321 234444432 2479999
Q ss_pred eCCCCCh
Q 009972 441 YASNGTL 447 (521)
Q Consensus 441 y~~~g~L 447 (521)
|++.+..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987654
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.64 E-value=1.4e-05 Score=70.72 Aligned_cols=81 Identities=15% Similarity=0.187 Sum_probs=35.9
Q ss_pred CCEEEcCCCcccccCCcccCCCCCCcEEEccCCC-CCCCCCcccCCC----cCCceEeccccc-CCCCCchhhhCCCCCC
Q 009972 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ-LTGPIPPEIGNL----TGLVKINLQSNG-LTGRLPAELGNLISLE 169 (521)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~ 169 (521)
|++|||+++.++..--..+..+++|+.|+|+++. ++..-=..+..+ ++|++|+|++|. +|..--..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 4444444444332212233445555555555542 331111122222 245666666553 4432223455566666
Q ss_pred EEeCCCC
Q 009972 170 ELHLDRN 176 (521)
Q Consensus 170 ~L~Ls~N 176 (521)
+|+|+++
T Consensus 143 ~L~L~~c 149 (176)
T 3e4g_A 143 YLFLSDL 149 (176)
T ss_dssp EEEEESC
T ss_pred EEECCCC
Confidence 6666665
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00034 Score=71.40 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=27.1
Q ss_pred CCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 483 GPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 483 ~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
.+.++|+|++|.|||+++++ ++|.||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 34899999999999998776 99999988764
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.42 E-value=3.9e-05 Score=67.85 Aligned_cols=86 Identities=13% Similarity=0.105 Sum_probs=65.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCc-ccccCCcccCCC----CCCcEEEccCCC-CCCCCCcccCCCcC
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLL----KRLKILDLGTNQ-LTGPIPPEIGNLTG 143 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 143 (521)
-+++.|||+++.++..--..+..+++|++|+|+++. ++..-=..+..+ ++|++|+|+++. +|..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999876544567899999999999995 664322335554 479999999984 76332345678999
Q ss_pred CceEeccccc-CC
Q 009972 144 LVKINLQSNG-LT 155 (521)
Q Consensus 144 L~~L~Ls~N~-l~ 155 (521)
|++|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999985 44
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0017 Score=63.30 Aligned_cols=156 Identities=10% Similarity=0.055 Sum_probs=86.0
Q ss_pred cCHHHHHHHHhhhh-------hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCc--c
Q 009972 350 FSRQELEVACEDFS-------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--T 420 (521)
Q Consensus 350 ~~~~~l~~~~~~f~-------~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--i 420 (521)
++.+++......|. +.|+.|....+|+....+| .+++|...... ....+..|+.++..++... +
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~v 79 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSC 79 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCC
Confidence 44455555554443 3466788889999988766 57788764310 1124566777777664322 2
Q ss_pred ceeeeEe------ecCCCCceEEEEeeCCCCChhh--------------hhhcC--C---C-----CCCCHHHHHHH---
Q 009972 421 GKLLGYC------RESSPFTRMLVFDYASNGTLYE--------------HLHYG--E---R-----CQVSWTRRMKI--- 467 (521)
Q Consensus 421 v~l~g~~------~~~~~~~~~lv~ey~~~g~L~~--------------~l~~~--~---~-----~~l~~~~~~~i--- 467 (521)
.+++... ...+ ..++++||+++..+.. .+|.. . . ....|.....-
T Consensus 80 P~~~~~~~g~~~~~~~g--~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 157 (322)
T 2ppq_A 80 PLPLPRKDGELLGELSG--RPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEE 157 (322)
T ss_dssp CCBCCBTTCCSCEEETT--EEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGG
T ss_pred CcccCCCCCCEEEEECC--EEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHH
Confidence 3333211 1112 5689999999865421 12210 0 0 00124432111
Q ss_pred ---------HHHHHHHHHHHhcC----CCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 468 ---------VIGIARGLKYLHTE----LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 468 ---------~~~ia~gL~yLH~~----~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
...+.+.+++++.. ..+.++|+|+.+.|||++++..+.|.||+.+..
T Consensus 158 ~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 158 RADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 11244455666532 234789999999999999876678999987653
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0007 Score=56.80 Aligned_cols=56 Identities=29% Similarity=0.420 Sum_probs=31.0
Q ss_pred EEEccCCCCC-CCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCC
Q 009972 122 ILDLGTNQLT-GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 122 ~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555554 23443322 34566666666666444445566667777777777654
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0052 Score=59.98 Aligned_cols=155 Identities=10% Similarity=0.061 Sum_probs=86.0
Q ss_pred cCHHHHHHHHhhhh-------hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCc--c
Q 009972 350 FSRQELEVACEDFS-------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--T 420 (521)
Q Consensus 350 ~~~~~l~~~~~~f~-------~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--i 420 (521)
++.+++......+. ..++ |....||+....+|+.+++|...... . ....+..|..++..++... +
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~---~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER--W---TADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT--S---CHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC--C---CHHHHHHHHHHHHHHHHcCCee
Confidence 44555655555443 2355 77789999887777778898863211 1 1345667888877774222 3
Q ss_pred ceeeeE-----eecCCCCceEEEEeeCCCCChhh-----h---------hhc---C----CCCCCCHHHH----HHH---
Q 009972 421 GKLLGY-----CRESSPFTRMLVFDYASNGTLYE-----H---------LHY---G----ERCQVSWTRR----MKI--- 467 (521)
Q Consensus 421 v~l~g~-----~~~~~~~~~~lv~ey~~~g~L~~-----~---------l~~---~----~~~~l~~~~~----~~i--- 467 (521)
.+++.. ....+ ..+++|||+++..+.. + +|. . ....+++... ..+
T Consensus 85 p~~~~~~g~~~~~~~g--~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (328)
T 1zyl_A 85 AAPVAFNGQTLLNHQG--FYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFED 162 (328)
T ss_dssp CCCCCBTTBSCEEETT--EEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHT
T ss_pred cceeecCCcEEEEECC--EEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhh
Confidence 444443 11112 5678999998754321 1 121 0 0112233211 001
Q ss_pred ------------HHHHHHHHHHHhcC----CCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 468 ------------VIGIARGLKYLHTE----LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 468 ------------~~~ia~gL~yLH~~----~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
...+.+.++.+... ..+.++|+|+++.|||++ + .+.|.||+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 163 ATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 234678999999999999 4 899999987654
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0012 Score=64.98 Aligned_cols=32 Identities=9% Similarity=0.026 Sum_probs=27.4
Q ss_pred CCCeeecCCCCCCeeecCC----CCeeeCCCchhhh
Q 009972 483 GPPFTISELNSSAVYLTED----FSPKVSPLCLSFL 514 (521)
Q Consensus 483 ~~~ivH~dlk~~NILld~~----~~~kl~DfGla~~ 514 (521)
.+.++|||+.+.||+++++ ..+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3478999999999999875 6789999998764
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0015 Score=65.83 Aligned_cols=110 Identities=13% Similarity=0.185 Sum_probs=57.2
Q ss_pred cccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCC
Q 009972 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168 (521)
Q Consensus 89 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 168 (521)
.|..++.|+.+.+..+... .-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..+ ++..-..+|.++.+|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 3455566666666544332 334455566666666664 3344233345556666666666543 442334455666666
Q ss_pred CEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCcc
Q 009972 169 EELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFF 223 (521)
Q Consensus 169 ~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l 223 (521)
+.+.+..+ ++ .++. ..|.++.+|+.+++.+|..
T Consensus 337 ~~i~ip~s-v~-~I~~--------------------~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 337 ERIAIPSS-VT-KIPE--------------------SAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CEEEECTT-CC-BCCG--------------------GGGTTCTTCCEEEESSCHH
T ss_pred CEEEECcc-cC-EEhH--------------------hHhhCCCCCCEEEECCcee
Confidence 66655432 32 2222 1244566777777776643
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0019 Score=64.57 Aligned_cols=109 Identities=16% Similarity=0.154 Sum_probs=67.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.+..+.+..+ +...-...+..+..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++++|+.+++.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 3455555433 33333455667777777777655 55445566777777777777544 442334566777777777777
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 184 (521)
++.++..-+.+|.++.+|+.+.|..+ ++ .++.
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~ 326 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQV 326 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT-CC-EECT
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc-cc-EEHH
Confidence 77776444566777777777777644 44 4444
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.003 Score=61.05 Aligned_cols=30 Identities=3% Similarity=-0.240 Sum_probs=25.4
Q ss_pred CCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 484 PPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 484 ~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+.++|+|+.+.||+ .+++.+.|.||..+..
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 45799999999999 6667889999987764
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.001 Score=55.74 Aligned_cols=55 Identities=29% Similarity=0.395 Sum_probs=29.0
Q ss_pred EEEecCCCCc-ccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCC
Q 009972 74 KINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (521)
Q Consensus 74 ~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 130 (521)
.++.++++|+ ..+|..+ -++|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4666677765 2344322 23455666666666544444455555555555555544
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00026 Score=63.76 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=74.0
Q ss_pred CCCEEEEEecCC-CCcc----cCCccccCCCCCCEEEcCCCccccc----CCcccCCCCCCcEEEccCCCCCCC----CC
Q 009972 69 RDRVLKINISGS-SLKG----FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (521)
Q Consensus 69 ~~~l~~L~L~~n-~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 135 (521)
...++.|+|++| .|.. .+-..+..-+.|+.|+|++|+|... +-+.+..=+.|+.|+|+.|+|+.. +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 457889999885 7753 2345566778899999999998732 223344457799999999988632 22
Q ss_pred cccCCCcCCceEeccccc---CCC----CCchhhhCCCCCCEEeCCCCcC
Q 009972 136 PEIGNLTGLVKINLQSNG---LTG----RLPAELGNLISLEELHLDRNRL 178 (521)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~---l~g----~~p~~~~~l~~L~~L~Ls~N~l 178 (521)
+.+..-+.|+.|+|++|. +.. .+-..+..-++|+.|+++.|.+
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 334555679999998653 332 1334455667889999887764
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.002 Score=65.82 Aligned_cols=72 Identities=11% Similarity=0.107 Sum_probs=47.1
Q ss_pred hhhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCcc-ceeeeEeecCCCCc
Q 009972 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~ 434 (521)
+.|+.|....+|++..++ +..+.+|+.... . ....+.+|..++..+...++ .++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--E----TESHLVAESVIFTLLSERHLGPKLYGIFS--G--- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--C----CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T---
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--C----cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C---
Confidence 457788889999998763 467888775211 1 11345679888888854444 56666543 2
Q ss_pred eEEEEeeCCCCCh
Q 009972 435 RMLVFDYASNGTL 447 (521)
Q Consensus 435 ~~lv~ey~~~g~L 447 (521)
.+|+||+++.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 389999986443
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0053 Score=61.35 Aligned_cols=96 Identities=13% Similarity=0.092 Sum_probs=74.8
Q ss_pred CCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCC
Q 009972 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNL 165 (521)
Q Consensus 86 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 165 (521)
....+.....|+.+.+..+ +...-...|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++
T Consensus 209 ~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c 285 (379)
T 4h09_A 209 TAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGC 285 (379)
T ss_dssp CTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTC
T ss_pred eecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccc
Confidence 3456778889999999765 45456677899999999999876 55455677889999999999755 553445678899
Q ss_pred CCCCEEeCCCCcCCccCCCC
Q 009972 166 ISLEELHLDRNRLQGAVPAG 185 (521)
Q Consensus 166 ~~L~~L~Ls~N~l~g~~p~~ 185 (521)
++|+.+.+.++.++ .++..
T Consensus 286 ~~L~~i~l~~~~i~-~I~~~ 304 (379)
T 4h09_A 286 SNLTKVVMDNSAIE-TLEPR 304 (379)
T ss_dssp TTCCEEEECCTTCC-EECTT
T ss_pred cccccccccccccc-eehhh
Confidence 99999999988887 56553
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0067 Score=60.65 Aligned_cols=140 Identities=11% Similarity=0.056 Sum_probs=80.2
Q ss_pred hhhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCcc-ceeeeEeecCCCCc
Q 009972 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~ 434 (521)
+.+..|....+|++...+ ++.+.+|+.... . .......+|.++++.+.-.++ .++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-L----QGVDSLVLESVMFAILAERSLGPQLYGVFP--E--- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T---
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-c----chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C---
Confidence 356677788899998753 467888764211 0 112345689998887743333 45666553 2
Q ss_pred eEEEEeeCCCCChhhh-----------------hhcCC---CCCCC--HHHHHHHHHHHH-------------------H
Q 009972 435 RMLVFDYASNGTLYEH-----------------LHYGE---RCQVS--WTRRMKIVIGIA-------------------R 473 (521)
Q Consensus 435 ~~lv~ey~~~g~L~~~-----------------l~~~~---~~~l~--~~~~~~i~~~ia-------------------~ 473 (521)
.+||||+++.++..- +|... ..... |.+..++..++. +
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 299999997554311 12111 11122 455555544332 1
Q ss_pred HHHHHh----cC-CCCCeeecCCCCCCeeecCC----CCeeeCCCchhhh
Q 009972 474 GLKYLH----TE-LGPPFTISELNSSAVYLTED----FSPKVSPLCLSFL 514 (521)
Q Consensus 474 gL~yLH----~~-~~~~ivH~dlk~~NILld~~----~~~kl~DfGla~~ 514 (521)
.+.+|. .. ....++|+|+.+.||+++++ +.+.|.||..|..
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 233332 21 23368999999999999876 7899999998764
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0076 Score=60.64 Aligned_cols=105 Identities=14% Similarity=0.170 Sum_probs=80.1
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.+.+..+.. ..-...|.+++.|+.+.+. +.++..-...|.++.+|+.++|..+ ++..-...|.++++|+.+.|.
T Consensus 266 ~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 266 YLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp SCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 455566654332 2334568889999999996 5566566778999999999999865 664456789999999999997
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
.+ ++..-..+|.++++|+.+++.+|...
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 65 66455678999999999999987543
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.006 Score=60.77 Aligned_cols=73 Identities=10% Similarity=0.014 Sum_probs=41.2
Q ss_pred hhhCcCCCeeEEEEEeCC---------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCcc-ceeeeEeecCCCC
Q 009972 364 NIIGSSPDSLVYKGTMKG---------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPF 433 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~---------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~ 433 (521)
..++.|....+|+....+ ++.+++|+....... ......|.+++..+...++ .++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-----~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-----LYNTISEFEVYKTMSKYKIAPQLLNTF--N--- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-----TSCHHHHHHHHHHHHHTTSSCCEEEEE--T---
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-----eecHHHHHHHHHHHHhcCCCCceEEec--C---
Confidence 456778888999998764 256777764221111 0123567888877743343 3566543 2
Q ss_pred ceEEEEeeCCCCCh
Q 009972 434 TRMLVFDYASNGTL 447 (521)
Q Consensus 434 ~~~lv~ey~~~g~L 447 (521)
-++||||+++..+
T Consensus 109 -~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 -GGRIEEWLYGDPL 121 (369)
T ss_dssp -TEEEEECCCSEEC
T ss_pred -CcEEEEEecCCcC
Confidence 2689999987543
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.019 Score=56.52 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=27.6
Q ss_pred CCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 484 PPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 484 ~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
+.++|+|+.+.||++++++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4789999999999999888899999987654
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.014 Score=59.96 Aligned_cols=73 Identities=12% Similarity=0.089 Sum_probs=45.0
Q ss_pred hhhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCcc-ceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~~lv~ey 441 (521)
+.|+.|-...+|+....+ +..+.+|+........ . .-.+|..++..+...++ .++++++. + .+||||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~---i--dR~~E~~vl~~L~~~gl~P~ll~~~~--~----G~v~e~ 182 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI---I--NREREKKISCILYNKNIAKKIYVFFT--N----GRIEEF 182 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC---S--CHHHHHHHHHHHTTSSSBCCEEEEET--T----EEEEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh---c--CHHHHHHHHHHHHhcCCCCCEEEEeC--C----eEEEEe
Confidence 457788889999998875 4667777652211110 0 12578888888865555 46666652 2 259999
Q ss_pred CCCCCh
Q 009972 442 ASNGTL 447 (521)
Q Consensus 442 ~~~g~L 447 (521)
+++.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987544
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.013 Score=58.77 Aligned_cols=141 Identities=16% Similarity=0.090 Sum_probs=80.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.+.+..+ ++..-...+..+..|+.+.+..+... .....|..+..|+.+.+..+.+. ...|..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccc
Confidence 4566666533 33333455677788888888776543 44556667777777766655432 2345666677777665
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCC-----CcccCCCCCEEeccCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-----GLCHLSQLKVADFSYN 221 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~-----~~~~l~~L~~L~ls~N 221 (521)
.+ ++..-..+|.++.+|+.++|..+ ++ .++...+.. ..+|..+.+..+ ++ .|..+.+|+.+++..|
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~-c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRG-CTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTT-CTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccC-CCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 44 44333455666777777776543 44 444432221 123444444433 22 3566788999988655
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0042 Score=62.57 Aligned_cols=100 Identities=16% Similarity=0.070 Sum_probs=75.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.+.+..+.+ ....+..+.+|+.+.+..+ +..+-..+|.++++|+.++|..+ ++..-...|.++++|+.++|.
T Consensus 277 ~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp 351 (394)
T 4fs7_A 277 GLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFP 351 (394)
T ss_dssp TCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCC
T ss_pred ccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEEC
Confidence 344455444332 2346788999999999765 66566778999999999999755 664446789999999999998
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
.| ++..-..+|.++++|+.+++..+
T Consensus 352 ~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 352 LS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cc-ccEehHHHhhCCCCCCEEEECCC
Confidence 77 66555678999999999998755
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0021 Score=57.77 Aligned_cols=90 Identities=19% Similarity=0.096 Sum_probs=64.2
Q ss_pred ccccCCCCCCEEEcCCC-ccccc----CCcccCCCCCCcEEEccCCCCCC----CCCcccCCCcCCceEecccccCCCC-
Q 009972 88 PELGLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGR- 157 (521)
Q Consensus 88 ~~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~- 157 (521)
..+.+-+.|++|+|++| +|... +-+.+..-+.|+.|+|++|+|.. .+-+.+..-+.|+.|+|++|.|+..
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34556788999999986 77521 33456666889999999999862 2233344557899999999999842
Q ss_pred ---CchhhhCCCCCCEEeCCCCc
Q 009972 158 ---LPAELGNLISLEELHLDRNR 177 (521)
Q Consensus 158 ---~p~~~~~l~~L~~L~Ls~N~ 177 (521)
+-..+..-+.|++|+|++|.
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHHhhCCceeEEECCCCc
Confidence 23345556789999998753
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=94.06 E-value=0.37 Score=48.68 Aligned_cols=139 Identities=10% Similarity=0.081 Sum_probs=80.2
Q ss_pred hhhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCcc-ceeeeEeecCCCCc
Q 009972 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~ 434 (521)
+.+..|-...+|+....+ ++.+.+|+........ -+-.+|.++++.+.-.++ .++++.+ .
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-----idR~~E~~~l~~L~~~gi~P~l~~~~--~---- 144 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-----YDSKVELDVFRYLSNINIAPNIIADF--P---- 144 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-----CCHHHHHHHHHHHHHTTSSCCEEEEE--T----
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-----cCHHHHHHHHHHHHhcCCCCCEEEEc--C----
Confidence 356678888999998863 4678887752221110 012567777777743333 4555433 2
Q ss_pred eEEEEeeCCCCChhh-------h----------hhc----C-------CCCCCCHHHHHHHHHHH---------------
Q 009972 435 RMLVFDYASNGTLYE-------H----------LHY----G-------ERCQVSWTRRMKIVIGI--------------- 471 (521)
Q Consensus 435 ~~lv~ey~~~g~L~~-------~----------l~~----~-------~~~~l~~~~~~~i~~~i--------------- 471 (521)
-++||||+++..|.. . +|. . ...+--|.+..++..++
T Consensus 145 ~~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 224 (424)
T 3mes_A 145 EGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKEL 224 (424)
T ss_dssp TEEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHH
T ss_pred CCEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhcccc
Confidence 268999999865421 0 110 0 11122244433333221
Q ss_pred ----HHHHHHHhc---------------------CCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 472 ----ARGLKYLHT---------------------ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 472 ----a~gL~yLH~---------------------~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
...+.+|.. .....++|+|+.+.||+ ++++.+.|.||..|..
T Consensus 225 ~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 225 YSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 223334321 11236789999999999 8888999999998764
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=91.64 E-value=0.48 Score=47.46 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=24.6
Q ss_pred eeecCCCCCCeee------cCCCCeeeCCCchhhh
Q 009972 486 FTISELNSSAVYL------TEDFSPKVSPLCLSFL 514 (521)
Q Consensus 486 ivH~dlk~~NILl------d~~~~~kl~DfGla~~ 514 (521)
++|+|+.+.|||+ +++..+++.||-+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 4699999999999 4567799999998764
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=88.33 E-value=1.2 Score=40.19 Aligned_cols=89 Identities=11% Similarity=0.115 Sum_probs=63.5
Q ss_pred CCCccceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 009972 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 416 ~H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~N 495 (521)
.||+++.. .+-.+.+ ...+.|+.-+++-=+..++ .++...+++++..|+.-..+++.+ +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD--~v~~~y~~~~~~~~f~~ik-----~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRD--SFQIHYDINDNHTPFDNIK-----SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSS--EEEEEECCCTTSEEGGGGG-----GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEccc--EEEEEEEcCcccCCHHHHH-----hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888866 4444444 4455555444332222232 367899999999999888776654 777899999
Q ss_pred eeecCCCCeeeCCCchhhhccc
Q 009972 496 VYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 496 ILld~~~~~kl~DfGla~~~~~ 517 (521)
+++|.++.|++.-.|+-..+.+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P 131 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDP 131 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSC
T ss_pred EEEcCCCCEEEEEccCccCCCC
Confidence 9999999999999998666544
|
| >4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid} | Back alignment and structure |
|---|
Probab=87.24 E-value=2.1 Score=38.71 Aligned_cols=88 Identities=9% Similarity=0.044 Sum_probs=62.6
Q ss_pred CCCccceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCeeecCCCCC
Q 009972 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK-YLHTELGPPFTISELNSS 494 (521)
Q Consensus 416 ~H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivH~dlk~~ 494 (521)
.||.+ -..+-.+.+ ...+.|+--+++.=+..++ .++...|++++..++.-.. +++.+ +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD--~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSED--EVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSS--EEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCC--EEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 67777 333334444 5556666554543344443 3678999999999988777 66544 77788999
Q ss_pred CeeecCCCCeeeCCCchhhhccc
Q 009972 495 AVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 495 NILld~~~~~kl~DfGla~~~~~ 517 (521)
||++|.++.|++.-.|+-..+.|
T Consensus 114 NL~f~~~~~p~i~hRGi~~~lpP 136 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESLPP 136 (219)
T ss_dssp GEEECTTCCEEESCCEETTTBSS
T ss_pred eEEEeCCCcEEEEEcCCcccCCC
Confidence 99999999999999998666544
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=84.01 E-value=0.13 Score=52.71 Aligned_cols=60 Identities=7% Similarity=-0.102 Sum_probs=16.7
Q ss_pred hhhCcCCCeeEEEEEeCC-CCEEEE------EEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEee
Q 009972 364 NIIGSSPDSLVYKGTMKG-GPEIAV------ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~~vav------k~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 428 (521)
+.+| ||.||+|.+.. ..+||| |.... ..........|.+|..++...+|||+++.+++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~--~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQ--DGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCcccccc--ccccccccccccccccccccccccccCCCcceEE
Confidence 4565 99999999974 367888 65422 1222333456888999999999999999998865
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.81 E-value=0.11 Score=33.75 Aligned_cols=29 Identities=7% Similarity=-0.020 Sum_probs=14.5
Q ss_pred eeeeeeechhhHHHHHhhheeeEeeecCC
Q 009972 292 LTLEIVTGTMVGVLFLVAGFTGLQRCKSK 320 (521)
Q Consensus 292 i~~~iv~g~~~~~~~~~~~~~~~~~~~~~ 320 (521)
++++++.|+++.++++.+.++++||++.+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 44455555555444444445555554433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 521 | ||||
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-20 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-19 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-19 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-19 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-17 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-17 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-17 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 5e-17 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 5e-17 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 7e-17 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 7e-17 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-16 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-16 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-15 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-15 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-15 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 4e-15 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-14 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-14 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-14 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-14 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 5e-14 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-13 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-13 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 7e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-05 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-04 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 7e-04 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-13 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 7e-13 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 7e-13 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-12 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-12 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-04 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 3e-04 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 3e-12 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-12 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-12 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 7e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 8e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 6e-08 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-07 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-11 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-11 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-11 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 8e-11 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-10 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-10 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-10 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-10 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-10 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-09 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-09 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-09 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-08 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-08 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-08 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 8e-08 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-07 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-07 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 8e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-04 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 9e-07 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-06 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-06 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-06 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 0.003 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-06 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-06 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 3e-06 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 7e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 3e-05 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 3e-05 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.001 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 7e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 4e-04 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-04 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 88.7 bits (219), Expect = 3e-20
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 14/188 (7%)
Query: 337 IYID----SEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISL 390
I+ID + + V F++ E++++C +IG+ V G +K G EI V
Sbjct: 2 IFIDPFTFEDPNEAVREFAK-EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIK 60
Query: 391 CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEH 450
+K + F E + + + +H N L G +S+P M++ ++ NG+L +
Sbjct: 61 TLKSGYTEKQRR-DFLSEASIMGQFDHPNVIHLEGVVTKSTPV--MIITEFMENGSL-DS 116
Query: 451 LHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510
Q + + + ++ GIA G+KYL + +L + + + + KVS
Sbjct: 117 FLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFG 173
Query: 511 LSFLLVSS 518
LS L
Sbjct: 174 LSRFLEDD 181
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.0 bits (215), Expect = 1e-19
Identities = 29/169 (17%), Positives = 68/169 (40%), Gaps = 13/169 (7%)
Query: 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
E EV E +G+ V+ G G ++AV SL F E
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-----FLAEA 59
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
IA G+ ++ + +L ++ + +++ S K++ L+ L+ +
Sbjct: 117 QIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.8 bits (212), Expect = 2e-19
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 354 ELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
+ E+ + IGS VYKG G + ++ T F+ EV
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML----NVTAPTPQQLQAFKNEVGV 57
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
L + H N +GY +V + +LY HLH + + + I
Sbjct: 58 LRKTRHVNILLFMGYSTAPQLA---IVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQT 113
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
A+G+ YLH +L S+ ++L ED + K+ L+ +
Sbjct: 114 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.1 bits (210), Expect = 3e-19
Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 11/158 (6%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
F +G+ +V G +G ++A+ K E F E + ++HE
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAI-----KMIKEGSMSEDEFIEEAKVMMNLSHEKL 61
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+L G C + P ++ +Y +NG L +L R + + +++ + ++YL +
Sbjct: 62 VQLYGVCTKQRPI--FIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
F +L + + + KVS LS ++
Sbjct: 119 ---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 153
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.8 bits (196), Expect = 4e-17
Identities = 32/170 (18%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 353 QELEVACEDFSNI---IGSSPDSLVYKGTMKGGPEIAVISL-CIKEEHWTGYLELYFQRE 408
++L + ++ +G V +G + + +++ +K+ E RE
Sbjct: 1 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMRE 59
Query: 409 VADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIV 468
+ ++++ +L+G C+ + LV + A G L++ L G+R ++ + +++
Sbjct: 60 AQIMHQLDNPYIVRLIGVCQAEALM---LVMEMAGGGPLHKFLV-GKREEIPVSNVAELL 115
Query: 469 IGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
++ G+KYL F +L + V L K+S LS L +
Sbjct: 116 HQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 162
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.4 bits (195), Expect = 4e-17
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 374 VYKGTMKGGPEIAVISL-CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V KG + + +++ +K E L+ E + ++++ +++G C S
Sbjct: 23 VKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES- 81
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
MLV + A G L ++L + V +++V ++ G+KYL F +L
Sbjct: 82 --WMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLA 134
Query: 493 SSAVYLTEDFSPKVSPLCLSFLLVSS 518
+ V L K+S LS L +
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRAD 160
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.9 bits (194), Expect = 4e-17
Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 7/162 (4%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ED+ IG+ K K +I V + T + EV L + H
Sbjct: 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWK-ELDYGSMTEAEKQMLVSEVNLLRELKH 62
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGL 475
N + + + T +V +Y G L + G ER + ++++ + L
Sbjct: 63 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 122
Query: 476 KYLHTELGPPFTIS--ELNSSAVYLTEDFSPKVSPLCLSFLL 515
K H T+ +L + V+L + K+ L+ +L
Sbjct: 123 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 164
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.9 bits (194), Expect = 5e-17
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 356 EVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
+ ++ IG V G +G ++AV CIK + F E + +
Sbjct: 3 ALNMKELKLLQTIGKGEFGDVMLGDYRGN-KVAVK--CIKNDA----TAQAFLAEASVMT 55
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
++ H N +LLG E +V +Y + G+L ++L R + +K + +
Sbjct: 56 QLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 114
Query: 474 GLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505
++YL G F +L + V ++ED K
Sbjct: 115 AMEYLE---GNNFVHRDLAARNVLVSEDNVAK 143
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.5 bits (195), Expect = 5e-17
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE--SS 431
V++G +G E+AV +EE + + E+ + HEN + + +
Sbjct: 19 VWRGKWRGE-EVAVKIFSSREER-----SWFREAEIYQTVMLRHENILGFIAADNKDNGT 72
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPF 486
LV DY +G+L+++L+ R V+ +K+ + A GL +LH E+ P
Sbjct: 73 WTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 129
Query: 487 TISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L S + + ++ + ++ L L+ S+
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 79.0 bits (194), Expect = 7e-17
Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
Query: 349 RFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYF 405
+ + E+ D + + +G VY+G K +AV +L F
Sbjct: 6 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----F 60
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRM 465
+E A + I H N +LLG C PF ++ ++ + G L ++L R +VS +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLL 118
Query: 466 KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
+ I+ ++YL F +L + + E+ KV+
Sbjct: 119 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVA 157
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.2 bits (192), Expect = 7e-17
Identities = 32/158 (20%), Positives = 62/158 (39%), Gaps = 11/158 (6%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
F IGS LV+ G ++A+ K E F E + +++H
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAI-----KTIREGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+L G C E +P LVF++ +G L ++ +R + + + + + G+ YL
Sbjct: 63 VQLYGVCLEQAPI--CLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L + + E+ KVS ++ ++
Sbjct: 120 ---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 154
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.6 bits (193), Expect = 1e-16
Identities = 29/166 (17%), Positives = 59/166 (35%), Gaps = 10/166 (6%)
Query: 355 LEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADL 412
+E+ +DF + +G+ +V+K + K + L I E RE+ L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRN-QIIRELQVL 58
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
N G + ++ G+L + L + ++ K+ I +
Sbjct: 59 HECNSPYIVGFYGAFYSDGEI--SICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVI 114
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+GL YL + ++ S + + K+ +S L+ S
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.8 bits (191), Expect = 2e-16
Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 13/171 (7%)
Query: 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQR 407
++ E+ E +G V+ GT G +A+ K F +
Sbjct: 7 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAI-----KTLKPGTMSPEAFLQ 61
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKI 467
E + ++ HE +L E + +V +Y S G+L + L + + + +
Sbjct: 62 EAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 118
Query: 468 VIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
IA G+ Y+ + +L ++ + + E+ KV+ L+ L+ +
Sbjct: 119 AAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 166
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.2 bits (184), Expect = 2e-15
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 13/184 (7%)
Query: 339 IDSEILKDV--VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKE 394
++ E+++ V V L V F+ +IG VY GT+ G +I +
Sbjct: 9 LNPELVQAVQHVVIGPSSLIV---HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR 65
Query: 395 EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG 454
G + F E + +H N LLG C S + ++V Y +G L +
Sbjct: 66 ITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLR-SEGSPLVVLPYMKHGDLR-NFIRN 122
Query: 455 ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
E + + + +A+G+K+L + F +L + L E F+ KV+ L+
Sbjct: 123 ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 179
Query: 515 LVSS 518
+
Sbjct: 180 MYDK 183
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 74.6 bits (183), Expect = 2e-15
Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 12/171 (7%)
Query: 350 FSRQELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQR 407
F + + E + FS++ IG VY E+ I + +
Sbjct: 8 FFKDDPE---KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKI 467
EV L ++ H NT + G LV +Y + + + +
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKP--LQEVEIAAV 120
Query: 468 VIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
G +GL YLH+ ++ + + L+E K+ + ++ +
Sbjct: 121 THGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.5 bits (182), Expect = 2e-15
Identities = 38/206 (18%), Positives = 68/206 (33%), Gaps = 38/206 (18%)
Query: 335 DHIYIDSEIL--KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKG------GPEIA 386
+++YID L F R L F +G+ V + T G +A
Sbjct: 3 NYVYIDPTQLPYDHKWEFPRNRLS-----FGKTLGAGAFGKVVEATAYGLIKSDAAMTVA 57
Query: 387 VISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNG 445
V +K E E+ L+ + NH N LLG C P +++ +Y G
Sbjct: 58 VK--MLKPSAHLTEREA-LMSELKVLSYLGNHMNIVNLLGACTIGGP--TLVITEYCCYG 112
Query: 446 TLYEHLH----------------YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTIS 489
L L + + + +A+G+ +L ++
Sbjct: 113 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHR 169
Query: 490 ELNSSAVYLTEDFSPKVSPLCLSFLL 515
+L + + LT K+ L+ +
Sbjct: 170 DLAARNILLTHGRITKICDFGLARDI 195
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.1 bits (181), Expect = 4e-15
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 11/163 (6%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKE--EHWTGYLELYFQREVADLARI 415
+F ++GS VYKG E I + IKE E + E +A +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGL 475
++ + +LLG C S+ L+ G L ++ + + + + IA+G+
Sbjct: 69 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGM 124
Query: 476 KYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
YL +L + V + K++ L+ LL +
Sbjct: 125 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 164
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 72.6 bits (177), Expect = 1e-14
Identities = 41/193 (21%), Positives = 69/193 (35%), Gaps = 32/193 (16%)
Query: 353 QELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLC-IKE--EHWTGYLELYFQR 407
LE + IG V++ G ++ +K E + ++ FQR
Sbjct: 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR 65
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------- 452
E A +A ++ N KLLG C P L+F+Y + G L E L
Sbjct: 66 EAALMAEFDNPNIVKLLGVCAVGKP--MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123
Query: 453 -------YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505
+S ++ I +A G+ YL F +L + + E+ K
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVK 180
Query: 506 VSPLCLSFLLVSS 518
++ LS + S+
Sbjct: 181 IADFGLSRNIYSA 193
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (175), Expect = 2e-14
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 8/167 (4%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVAD 411
E+ +C +IG+ VYKG +K + + IK + +T + F E
Sbjct: 3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ + +H N +L G + P M++ +Y NG + + + S + + ++ GI
Sbjct: 63 MGQFSHHNIIRLEGVISKYKPM--MIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGI 119
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
A G+KYL + +L + + + + KVS LS +L
Sbjct: 120 AAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 163
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 72.0 bits (176), Expect = 2e-14
Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 6/155 (3%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
DF +++G+ S V K ++ I CI ++ G + E+A L +I H N
Sbjct: 12 DFRDVLGTGAFSEVILAEDKRTQKLVAIK-CIAKKALEGKEGS-MENEIAVLHKIKHPNI 69
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L L+ S G L++ + E+ + +++ + +KYLH
Sbjct: 70 VALDDIYESGGHL--YLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHD 125
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
+ N L ED +S LS +
Sbjct: 126 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.1 bits (176), Expect = 2e-14
Identities = 44/217 (20%), Positives = 83/217 (38%), Gaps = 39/217 (17%)
Query: 330 SASEKDHIYIDSEILKDVVR--FSRQELEVACEDFSNIIGSSPDSLVYKGTMKG----GP 383
+S+ ++ Y+D + ++ F R+ LE F ++GS V T G G
Sbjct: 12 GSSDNEYFYVDFREYEYDLKWEFPRENLE-----FGKVLGSGAFGKVMNATAYGISKTGV 66
Query: 384 EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442
I V +KE+ + E E+ + ++ +HEN LLG C S P L+F+Y
Sbjct: 67 SIQVAVKMLKEKADSSERE-ALMSELKMMTQLGSHENIVNLLGACTLSGPI--YLIFEYC 123
Query: 443 SNGTLYEHLH---------------------YGERCQVSWTRRMKIVIGIARGLKYLHTE 481
G L +L + +++ + +A+G+++L
Sbjct: 124 CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF- 182
Query: 482 LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L + V +T K+ L+ ++S
Sbjct: 183 --KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 217
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.0 bits (171), Expect = 5e-14
Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 9/164 (5%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
EDF +G VY K I + + K + +E +REV + + H
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
N +L GY +++ L+ +YA GT+Y L + R + +A L Y
Sbjct: 66 PNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 121
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSIIC 521
H++ ++ + L K++ S SS
Sbjct: 122 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 162
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.2 bits (169), Expect = 1e-13
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 9/161 (5%)
Query: 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
F IG VYKG E+A +++ T F+ E L + H N
Sbjct: 13 FDIEIGRGSFKTVYKGLDTETTVEVAWC--ELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70
Query: 421 GKLLGYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+ + + +LV + ++GTL +L + I +GL++L
Sbjct: 71 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFL 128
Query: 479 HTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLVSS 518
H PP +L +++T S K+ L L+ L +S
Sbjct: 129 H-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 168
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.1 bits (168), Expect = 1e-13
Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 20/169 (11%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHEN 419
F ++IG V K +K ++ +E+ + F E+ L ++ +H N
Sbjct: 13 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 72
Query: 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------YGERCQVSWTRRM 465
LLG C L +YA +G L + L +S + +
Sbjct: 73 IINLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 130
Query: 466 KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
+ARG+ YL F +L + + + E++ K++ LS
Sbjct: 131 HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRG 176
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.6 bits (167), Expect = 2e-13
Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 12/149 (8%)
Query: 374 VYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
V +G +AV L ++ F REV + ++H N +L G
Sbjct: 24 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTIS 489
+V + A G+L + + + + +A G+ YL + F
Sbjct: 83 PPMK---MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHR 135
Query: 490 ELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L + + L K+ L L +
Sbjct: 136 DLAARNLLLATRDLVKIGDFGLMRALPQN 164
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 68.9 bits (167), Expect = 4e-13
Identities = 42/210 (20%), Positives = 72/210 (34%), Gaps = 51/210 (24%)
Query: 47 LSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNL 106
L+N +L A + I + +++++G+ LK L LT L +L L N +
Sbjct: 196 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQI 253
Query: 107 IGIIPKELGLLKRLKILDLGTNQLTGPIP--------------------PEIGNLTGLVK 146
+ P L L +L L LG NQ++ P I NL L
Sbjct: 254 SNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTY 311
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ L N ++ P + +L L+ L N++ ++
Sbjct: 312 LTLYFNNISDISP--VSSLTKLQRLFFANNKVSD-----------------------VSS 346
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L +L+ + +N P L L
Sbjct: 347 LANLTNINWLSAGHNQISDLTP--LANLTR 374
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 67.7 bits (164), Expect = 7e-13
Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 49/199 (24%)
Query: 43 PHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILH 102
P +L+N + L + I + + ++++ + + L LT L EL L
Sbjct: 214 PLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNL--APLSGLTKLTELKLG 271
Query: 103 GNNLIGIIP--------------------KELGLLKRLKILDLGTNQLTGPIPPEIGNLT 142
N + I P + LK L L L N ++ P + +LT
Sbjct: 272 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLT 329
Query: 143 GLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSA 202
L ++ +N ++ + L NL ++ L N++ P
Sbjct: 330 KLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP------------------- 368
Query: 203 NLTGLCHLSQLKVADFSYN 221
L +L+++ +
Sbjct: 369 ----LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 43.1 bits (100), Expect = 6e-05
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K + +++ ++ L + L + I + L L ++ NQLT
Sbjct: 24 KMKTVLGKTNVTDTVSQTD--LDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLT 79
Query: 132 GPIPPEIGNLTGLVKIN 148
P + NLT LV I
Sbjct: 80 DITP--LKNLTKLVDIL 94
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 40.8 bits (94), Expect = 3e-04
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
L LG +T + +L + + G+ + + L +L +++ N
Sbjct: 21 LAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNN 76
Query: 177 RLQGAVPAGSNS 188
+L P + +
Sbjct: 77 QLTDITPLKNLT 88
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 7e-04
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 29/108 (26%)
Query: 125 LGTNQLTGPIP-PEI---GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
LG+ +T P +I L +K L +T + +L + L DR ++
Sbjct: 1 LGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK- 57
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228
++ G+ +L+ L +FS N P
Sbjct: 58 ----------------------SIDGVEYLNNLTQINFSNNQLTDITP 83
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.7 bits (165), Expect = 4e-13
Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 12/163 (7%)
Query: 360 EDFSNI---IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
EDF I +G VYK K +A I + + + E+ LA +
Sbjct: 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAK-VIDTKSEEELED--YMVEIDILASCD 67
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KLL + ++ ++ + G + + ER ++ ++ + L
Sbjct: 68 HPNIVKLLDAFYYENNL--WILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALN 124
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSI 519
YLH +L + + T D K++ +S +I
Sbjct: 125 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 164
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.2 bits (163), Expect = 7e-13
Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 24/181 (13%)
Query: 354 ELEVACEDFS--NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYF 405
E EVA E + +G +VY+G KG +A+ + E F
Sbjct: 14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI--KTVNEAASMRERI-EF 70
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY--------GERC 457
E + + N + +LLG + P +++ + + G L +L
Sbjct: 71 LNEASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPAMANNPVLA 128
Query: 458 QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ ++ +
Sbjct: 129 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 185
Query: 518 S 518
+
Sbjct: 186 T 186
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.7 bits (162), Expect = 7e-13
Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 12/169 (7%)
Query: 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ E+ E IG V++G P +AV K E F +E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEA 59
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ + +H + KL+G E+ + ++ + + G L + + +
Sbjct: 60 LTMRQFDHPHIVKLIGVITENPVW---IIMELCTLGELRSF-LQVRKYSLDLASLILYAY 115
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
++ L YL + F ++ + V ++ + K+ LS + S
Sbjct: 116 QLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 161
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 65.9 bits (160), Expect = 2e-12
Identities = 23/152 (15%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 332 SEKDHIYID--SEILKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAV 387
++ D Y D + + V + + + + +GS +V++ K + V
Sbjct: 2 NDYDKFYEDIWKKYVPQPVEVKQGSVY---DYYDILEELGSGAFGVVHRCVEKATGRVFV 58
Query: 388 ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
Y + E++ + +++H L + +L+ ++ S G L
Sbjct: 59 AKFINTPYPLDKYT---VKNEISIMNQLHHPKLINLHDAFEDKYEM--VLILEFLSGGEL 113
Query: 448 YEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
++ + E ++S + + GLK++H
Sbjct: 114 FDRIA-AEDYKMSEAEVINYMRQACEGLKHMH 144
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 65.4 bits (158), Expect = 2e-12
Identities = 32/194 (16%), Positives = 54/194 (27%), Gaps = 17/194 (8%)
Query: 58 CHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL 117
CH + CSD + ++ L L N + I + L
Sbjct: 10 CHLRVVQCSDLGLEKVPKDLP---------------PDTALLDLQNNKITEIKDGDFKNL 54
Query: 118 KRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNR 177
K L L L N+++ P L L ++ L N L L L + +
Sbjct: 55 KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITK 114
Query: 178 LQGAVPAGSNSGYTANIHGMYASSAN--LTGLCHLSQLKVADFSYNFFVGSIPKCLEYLP 235
++ +V G N + S+ + +L + L
Sbjct: 115 VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLT 174
Query: 236 STSFQGNCLQNKDP 249
GN + D
Sbjct: 175 ELHLDGNKITKVDA 188
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.8 bits (94), Expect = 2e-04
Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 20/201 (9%)
Query: 32 LTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELG 91
L E + + + + N + + + V+++ + G
Sbjct: 91 LKELPEKMPKTLQELRVHENEIT---KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 147
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
+ L + + N+ I GL L L L N++T + L L K+ L
Sbjct: 148 GMKKLSYIRIADTNITTIPQ---GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSF 204
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---- 207
N ++ L N L ELHL+ N+L ++ I +Y + N++ +
Sbjct: 205 NSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLAD---HKYIQVVYLHNNNISAIGSND 261
Query: 208 -------CHLSQLKVADFSYN 221
+ N
Sbjct: 262 FCPPGYNTKKASYSGVSLFSN 282
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.4 bits (93), Expect = 3e-04
Identities = 22/118 (18%), Positives = 35/118 (29%), Gaps = 29/118 (24%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI---------------- 134
GL L EL L GN + + L L L L L N ++
Sbjct: 168 GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 227
Query: 135 -------PPEIGNLTGLVKINLQSNGLTG------RLPAELGNLISLEELHLDRNRLQ 179
P + + + + L +N ++ P S + L N +Q
Sbjct: 228 NNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.6 bits (157), Expect = 3e-12
Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 11/158 (6%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ED+ +G V + E + + + E ++E+ +NH
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPE-NIKKEICINKMLNH 62
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
EN K G+ RE + L +Y S G L++ + + + + G+ Y
Sbjct: 63 ENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVY 118
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
LH T ++ + L E + K+S L+ +
Sbjct: 119 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 153
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 65.5 bits (159), Expect = 3e-12
Identities = 20/134 (14%), Positives = 55/134 (41%), Gaps = 11/134 (8%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V++ T + G A + E + ++E+ ++ + H L + +
Sbjct: 42 VHRVTERATGNNFAAKFVMTPHESD----KETVRKEIQTMSVLRHPTLVNLHDAFEDDNE 97
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
++++++ S G L+E + E ++S ++ + + +GL ++H + +L
Sbjct: 98 M--VMIYEFMSGGELFEKVA-DEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLK 151
Query: 493 SSAVYLTEDFSPKV 506
+ T S ++
Sbjct: 152 PENIMFTTKRSNEL 165
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.6 bits (159), Expect = 3e-12
Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 12/124 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+ +IG+ +VY+ + E+ I ++++ + RE+ + +++H N
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNI 75
Query: 421 GKLLGYCRESSPFTR----MLVFDYASNGTLYEHLHYGERCQ-VSWTRRMKIVIGIARGL 475
+L + S LV DY HY Q + + + R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 476 KYLH 479
Y+H
Sbjct: 136 AYIH 139
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 63.6 bits (154), Expect = 7e-12
Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 4/117 (3%)
Query: 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLL 424
I+G S V+ + + + L F+RE + A +NH +
Sbjct: 14 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 73
Query: 425 GYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+P +V +Y TL + +H ++ R ++++ + L + H
Sbjct: 74 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSH 128
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 63.6 bits (153), Expect = 1e-11
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 21 CNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH--WTGIACSDARD--RVLKIN 76
CN + AL K+ + +P LS+W D C+ W G+ C RV ++
Sbjct: 3 CNP---QDKQALLQIKKDL-GNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLD 56
Query: 77 ISGSSLKGF--LAPELGLLTYLQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+SG +L + L L YL L + G NL+G IP + L +L L + ++G
Sbjct: 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA 116
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
IP + + LV ++ N L+G LP + +L +L + D NR+ GA+P
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 60.9 bits (146), Expect = 8e-11
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN-GLTGR-L 158
L N + G +P+ L LK L L++ N L G I P+ GNL +N L G L
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI-PQGGNLQRFDVSAYANNKCLCGSPL 309
Query: 159 PA 160
PA
Sbjct: 310 PA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 60.5 bits (145), Expect = 1e-10
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
DL N++ G +P + L L +N+ N L G +P + GNL + N+ P
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 52.1 bits (123), Expect = 6e-08
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 58 CHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL 117
+ + +++ + + G L L L +L L + NNL G IP + G L
Sbjct: 232 SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNL 290
Query: 118 KRLKILDLGTNQ-LTG-PIPP 136
+R + N+ L G P+P
Sbjct: 291 QRFDVSAYANNKCLCGSPLPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 50.9 bits (120), Expect = 2e-07
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 27/91 (29%)
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+L++N + G LP L L L L++ N L G +P G N
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN-------------------- 289
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
L + V+ ++ N + P LP+ +
Sbjct: 290 --LQRFDVSAYANNKCLCGSP-----LPACT 313
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.5 bits (154), Expect = 1e-11
Identities = 16/133 (12%), Positives = 47/133 (35%), Gaps = 10/133 (7%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V++ + + K G ++ ++E++ L H N L
Sbjct: 21 VHRCVETSSKKTYMA----KFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEEL 76
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
+++F++ S ++E ++ +++ + V + L++LH+ ++
Sbjct: 77 --VMIFEFISGLDIFERIN-TSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRP 130
Query: 494 SAVYLTEDFSPKV 506
+ S +
Sbjct: 131 ENIIYQTRRSSTI 143
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.7 bits (152), Expect = 2e-11
Identities = 20/143 (13%), Positives = 50/143 (34%), Gaps = 13/143 (9%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
VY G E+A+ + ++++ + E+ + + N L
Sbjct: 36 VYTAMDVATGQEVAIRQMNLQQQPK----KELIINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
+V +Y + G+L + + + + + + L++LH+ ++
Sbjct: 92 L--WVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIK 143
Query: 493 SSAVYLTEDFSPKVSPLCLSFLL 515
S + L D S K++ +
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQI 166
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 62.4 bits (151), Expect = 2e-11
Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 16/168 (9%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELY-----FQREVAD 411
E++ I+G S+V + K E AV + + E+ +EV
Sbjct: 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62
Query: 412 LARIN-HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIG 470
L +++ H N +L LVFD G L+++L E+ +S KI+
Sbjct: 63 LRKVSGHPNIIQLKDTYET--NTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRA 118
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+ + LH +L + L +D + K++ S L
Sbjct: 119 LLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 163
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.7 bits (146), Expect = 8e-11
Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 27/187 (14%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISL----CIKEEHWTGYLELYF 405
F R L+ +G V + G + A +KE
Sbjct: 10 FPRDRLK-----LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR-AL 63
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV------ 459
E+ L I H L M++ ++ G L +L V
Sbjct: 64 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 123
Query: 460 --------SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511
+ + +A+G+++L + +L + + L+E K+ L
Sbjct: 124 EDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGL 180
Query: 512 SFLLVSS 518
+ +
Sbjct: 181 ARDIYKD 187
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 60.5 bits (146), Expect = 1e-10
Identities = 27/164 (16%), Positives = 47/164 (28%), Gaps = 12/164 (7%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-- 415
DFS IIG VY ++ + K+ E E L+ +
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 416 -NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
+ + + D + G L+ HL I G
Sbjct: 64 GDCPFIVCMSYAFHTPDKL--SFILDLMNGGDLHYHLSQHGVFS--EADMRFYAAEIILG 119
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
L+++H +L + + L E ++S L L+
Sbjct: 120 LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 160
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (143), Expect = 2e-10
Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 9/155 (5%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
EDF I+G S V I + K Y RE ++R++H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
KL ++ YA NG L +++ T I L+Y
Sbjct: 68 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEY 123
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
LH +L + L ED +++ +
Sbjct: 124 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTA 155
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.5 bits (143), Expect = 3e-10
Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 10/157 (6%)
Query: 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
+ IG +V I I Y + RE+ L R HEN +
Sbjct: 14 SYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQ-RTLREIKILLRFRHENIIGI 71
Query: 424 LGYCRESSPFTRMLVF--DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
R + V+ + LY+ L +S + I RGLKY+H+
Sbjct: 72 NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA 128
Query: 482 LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L S + L K+ L+ +
Sbjct: 129 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 162
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.7 bits (141), Expect = 4e-10
Identities = 36/186 (19%), Positives = 64/186 (34%), Gaps = 29/186 (15%)
Query: 356 EVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISL------CIKEEHWTGYLELYFQR 407
E+ + +G V G + + +K + L
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLIS 67
Query: 408 EVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY------------- 453
E+ + I H+N LLG C + P ++ +YAS G L E+L
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPS 125
Query: 454 -GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
Q+S + +ARG++YL + +L + V +TED K++ L+
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 513 FLLVSS 518
+
Sbjct: 183 RDIHHI 188
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.1 bits (142), Expect = 4e-10
Identities = 32/173 (18%), Positives = 54/173 (31%), Gaps = 18/173 (10%)
Query: 350 FSRQELEVACEDFSN------IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL 403
F RQE+ + +GS V I + + +
Sbjct: 4 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAK- 62
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTR----MLVFDYASNGTLYEHLHYGERCQV 459
RE+ L + HEN LL LV + GT L + ++
Sbjct: 63 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLM--KHEKL 118
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
R +V + +GL+Y+H +L + + ED K+ L+
Sbjct: 119 GEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLA 168
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.8 bits (136), Expect = 1e-09
Identities = 33/158 (20%), Positives = 54/158 (34%), Gaps = 11/158 (6%)
Query: 364 NIIGSSPDSLVYKGTMKGGPE---IAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+ +G + VYK K + I I L + E G RE+ L ++H N
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINR-TALREIKLLQELSHPNI 62
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
LL S LVFD+ + ++ +GL+YLH
Sbjct: 63 IGLLDAFGHKSNI--SLVFDFMETDLEVIIKDNSLVLT--PSHIKAYMLMTLQGLEYLH- 117
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L + + L E+ K++ L+ S
Sbjct: 118 --QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 153
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (137), Expect = 2e-09
Identities = 16/118 (13%), Positives = 38/118 (32%), Gaps = 11/118 (9%)
Query: 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKL 423
++G + V + K E + + +REV R + ++
Sbjct: 19 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK--------ARREVELHWRASQCPHIVRI 70
Query: 424 LGYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ + ++V + G L+ + + +I+ I ++YLH
Sbjct: 71 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 128
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (134), Expect = 4e-09
Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 12/145 (8%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V+K + + + + E G+ RE+ L + HEN L+ CR +
Sbjct: 26 VFKARHRKTGQKVALKKVLMENEKEGFPI-TALREIKILQLLKHENVVNLIEICRTKASP 84
Query: 434 TRM------LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFT 487
LVFD+ + + + +S +R ++ + GL Y+H
Sbjct: 85 YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIHR---NKIL 139
Query: 488 ISELNSSAVYLTEDFSPKVSPLCLS 512
++ ++ V +T D K++ L+
Sbjct: 140 HRDMKAANVLITRDGVLKLADFGLA 164
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.0 bits (129), Expect = 1e-08
Identities = 32/149 (21%), Positives = 50/149 (33%), Gaps = 10/149 (6%)
Query: 374 VYKGTMKG-GPEIAV--ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
V K K G + A I + G +REV+ L I H N L
Sbjct: 26 VKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 85
Query: 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISE 490
+ +L+ + + G L++ L E + I G+ YLH+ +
Sbjct: 86 TDV--ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHS---LQIAHFD 138
Query: 491 LNSSAVYLTEDFSPKVSPLCLSFLLVSSI 519
L + L + PK + F L I
Sbjct: 139 LKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 54.1 bits (129), Expect = 1e-08
Identities = 25/152 (16%), Positives = 47/152 (30%), Gaps = 9/152 (5%)
Query: 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
IG +VYK G A+ I+ E + RE++ L + H N KL
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELG 483
+LVF++ + ++ + G+ Y H
Sbjct: 66 YDVIHT--KKRLVLVFEHLDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHD--- 118
Query: 484 PPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
+L + + + K++ L+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAF 150
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.0 bits (129), Expect = 1e-08
Identities = 21/123 (17%), Positives = 37/123 (30%), Gaps = 7/123 (5%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
EDF ++G V+ K A+ +L +E +
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H + + V +Y + G L H+ + +R I GL+
Sbjct: 62 HPFLTHMFCTFQTKENL--FFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQ 117
Query: 477 YLH 479
+LH
Sbjct: 118 FLH 120
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.8 bits (123), Expect = 8e-08
Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 12/146 (8%)
Query: 374 VYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVA---DLARINHENTGKLLGYCR 428
V+K GG +A+ ++ + + L REVA L H N +L C
Sbjct: 23 VFKARDLKNGGRFVALK--RVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 80
Query: 429 ESSP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPF 486
S T++ + + L +L V ++ + RGL +LH+
Sbjct: 81 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RV 137
Query: 487 TISELNSSAVYLTEDFSPKVSPLCLS 512
+L + +T K++ L+
Sbjct: 138 VHRDLKPQNILVTSSGQIKLADFGLA 163
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.4 bits (122), Expect = 1e-07
Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 9/158 (5%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
E+F IG +VYK K E+ + I+ + T + RE++ L +NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK-KIRLDTETEGVPSTAIREISLLKELNH 60
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
N KLL + ++ + + L + + + + + +GL +
Sbjct: 61 PNIVKLLDVIHTEN---KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
H+ +L + + + + K++ L+
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAF 152
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.0 bits (121), Expect = 1e-07
Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 10/107 (9%)
Query: 374 VYKGT-MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
+Y GT + G E+A+ C+K +H E + + +C
Sbjct: 23 IYLGTDIAAGEEVAIKLECVKTKHPQ------LHIESKIYKMMQGGVGIPTIRWCGAEGD 76
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ ++V + + S + + + ++Y+H
Sbjct: 77 Y-NVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 120
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.9 bits (121), Expect = 2e-07
Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 9/155 (5%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
+DF +G+ V+ + + + KE + E L+ + H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
++ G +++ ++ DY G L+ L +R + + L+Y
Sbjct: 64 PFIIRMWGTFQDAQQI--FMIMDYIEGGELFSLLRKSQRFPNPVAKF--YAAEVCLALEY 119
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
LH+ +L + L ++ K++ +
Sbjct: 120 LHS---KDIIYRDLKPENILLDKNGHIKITDFGFA 151
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.8 bits (117), Expect = 4e-07
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L+EL + N LI + L RL+ L N L +P NL +++++ N
Sbjct: 283 PPSLEELNVSNNKLIELPA----LPPRLERLIASFNHLAE-VPELPQNLK---QLHVEYN 334
Query: 153 GLTGRLPAELGNLISLEELHLD 174
L P S+E+L ++
Sbjct: 335 PLRE-FPDIPE---SVEDLRMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.8 bits (117), Expect = 4e-07
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA 160
+ N I L L+ L++ N+L +P L L N L +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLERL---IASFNHLA-EVPE 321
Query: 161 ELGNLISLEELHLDRNRLQG 180
N L++LH++ N L+
Sbjct: 322 LPQN---LKQLHVEYNPLRE 338
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
L L+ LI N+L + L + LK L + N L P ++ L ++N
Sbjct: 301 ALPPRLERLIASFNHLAEVPE----LPQNLKQLHVEYNPLRE-FPDIPESVEDL-RMN 352
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (115), Expect = 8e-07
Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Query: 96 LQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQ 150
+Q L + L EL LL++ +++ L LT I + L ++NL+
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQG 180
SN L + + + + LQ
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.0 bits (104), Expect = 2e-05
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 120 LKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGR----LPAELGNLISLEELHLD 174
++ LD+ +L+ E+ L + L GLT + + L +L EL+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 175 RNRLQGA 181
N L
Sbjct: 64 SNELGDV 70
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 3e-05
Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Query: 74 KINISGSSLKGFLAPEL-GLLTYLQELILHGNNL----IGIIPKELGLLKRLKILDLGTN 128
++I L EL LL Q + L L I L + L L+L +N
Sbjct: 6 SLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSN 65
Query: 129 QLTGPIPPEIGNLTGLVKINLQSNGLTG 156
+L + +Q L
Sbjct: 66 ELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 7e-05
Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 9/81 (11%)
Query: 94 TYLQELILHGNNL----IGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-----NLTGL 144
+ L+ L L ++ + L L+ LDL N L ++ L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 145 VKINLQSNGLTGRLPAELGNL 165
++ L + + L L
Sbjct: 429 EQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (90), Expect = 9e-04
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 9/75 (12%)
Query: 118 KRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI-----SL 168
L++L L ++ + + L +++L +N L +L + L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 169 EELHLDRNRLQGAVP 183
E+L L +
Sbjct: 429 EQLVLYDIYWSEEME 443
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 48.7 bits (115), Expect = 9e-07
Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 14/123 (11%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN- 416
+D+ +G S V++ E V+ + + +RE+ L +
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK------IKREIKILENLRG 88
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
N L ++ T LVF++ +N + ++ + I + L
Sbjct: 89 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALD 143
Query: 477 YLH 479
Y H
Sbjct: 144 YCH 146
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (113), Expect = 1e-06
Identities = 19/139 (13%), Positives = 44/139 (31%), Gaps = 8/139 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V+K + EI + ++ + + RE+ L + H+N +L
Sbjct: 18 VFKAKNRETHEIVALK-RVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS--DK 74
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
LVF++ + + +GL + H+ +L
Sbjct: 75 KLTLVFEFCDQDLKKYFDSCNGDLD--PEIVKSFLFQLLKGLGFCHS---RNVLHRDLKP 129
Query: 494 SAVYLTEDFSPKVSPLCLS 512
+ + + K++ L+
Sbjct: 130 QNLLINRNGELKLANFGLA 148
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (112), Expect = 2e-06
Identities = 25/139 (17%), Positives = 42/139 (30%), Gaps = 13/139 (9%)
Query: 350 FSRQELEVACEDFSN------IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL 403
F RQEL + +GS V + + + +
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK- 62
Query: 404 YFQREVADLARINHENTGKLLGYCRESSP---FTRMLVFDYASNGTLYEHLHYGERCQVS 460
RE+ L + HEN LL + F + + + L + +
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--- 119
Query: 461 WTRRMKIVIGIARGLKYLH 479
++ I RGLKY+H
Sbjct: 120 DDHVQFLIYQILRGLKYIH 138
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (110), Expect = 2e-06
Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 5/175 (2%)
Query: 53 LDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK 112
LD G + + + ++L+ L L L LHGN + + +
Sbjct: 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171
Query: 113 ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELH 172
L L L L N++ P +L L+ + L +N L+ L L +L+ L
Sbjct: 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR 231
Query: 173 LDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC--HLSQLKVADFSYNFFVG 225
L+ N A + SS+ + L+ + + N G
Sbjct: 232 LNDNPWVCDCR---ARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (85), Expect = 0.003
Identities = 40/178 (22%), Positives = 57/178 (32%), Gaps = 11/178 (6%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124
C + + + L+ P G+ Q + LHGN + + + L IL
Sbjct: 6 CVCYNEPKVTTSCPQQGLQAV--PV-GIPAASQRIFLHGNRISHVPAASFRACRNLTILW 62
Query: 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL-PAELGNLISLEELHLDRNRLQGAVP 183
L +N L L L +++L N + PA L L LHLDR LQ P
Sbjct: 63 LHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP 122
Query: 184 AGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
A + +Y L L L L N + L S
Sbjct: 123 --GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 2e-06
Identities = 27/152 (17%), Positives = 46/152 (30%), Gaps = 7/152 (4%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
D+ ++G V K + + KE + E L H
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L + V +YA+ G L+ HL + R I L+YLH+
Sbjct: 68 TALKYAFQTHDRL--CFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHS 123
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
++ + L +D K++ L
Sbjct: 124 ---RDVVYRDIKLENLMLDKDGHIKITDFGLC 152
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 47.5 bits (112), Expect = 2e-06
Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 6/122 (4%)
Query: 360 EDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
+ F I +G+ V K + + K++ + E L +N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
KL ++ +V +Y + G ++ HL + S I +Y
Sbjct: 101 PFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEY 156
Query: 478 LH 479
LH
Sbjct: 157 LH 158
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.5 bits (107), Expect = 3e-06
Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 13/122 (10%)
Query: 364 NIIGSSPDSLVYKGTMKGGPEIAV------ISLCIKEEHWTGYLELYFQREVADLARINH 417
++G +S V+ + E V + K + Y +L+F AR
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
KL G V+ + N L E + E +V +++ I +
Sbjct: 66 RALQKLQGLAV-------PKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAK 118
Query: 478 LH 479
+
Sbjct: 119 FY 120
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (103), Expect = 7e-06
Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 3/102 (2%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLV 145
P+L L +++ + + L L+L N+L + + L
Sbjct: 36 PDLVAQNIDVVLNR-RSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLK 94
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
+NL N L + + LEEL LD N L S
Sbjct: 95 ILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.8 bits (100), Expect = 1e-05
Identities = 26/121 (21%), Positives = 38/121 (31%), Gaps = 29/121 (23%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL---------- 120
RVL +++ L L L + L L N L + P L L+ L
Sbjct: 1 RVL--HLAHKDLTVL--CHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNAL 55
Query: 121 ------------KILDLGTNQLTG-PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLIS 167
+ L L N+L + + LV +NLQ N L L
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEGIQERLAE 114
Query: 168 L 168
+
Sbjct: 115 M 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 37.8 bits (87), Expect = 6e-04
Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
++L LT L L+ + L L NRL+ PA + + + N+ G
Sbjct: 3 LHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 207 LCHLSQLKVADFSYNFFVG-SIPKCLEYLPS 236
+ +L +L+ N + + L P
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPR 91
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.2 bits (98), Expect = 3e-05
Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 10/140 (7%)
Query: 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
A + +EL L G I +I L + +D N++ L L
Sbjct: 11 AAQYTNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNEI--RKLDGFPLLRRLKT 67
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN--- 203
+ + +N + L L EL L N L + + + +
Sbjct: 68 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNK 127
Query: 204 ----LTGLCHLSQLKVADFS 219
L + + Q++V DF
Sbjct: 128 KHYRLYVIYKVPQVRVLDFQ 147
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.6 bits (101), Expect = 3e-05
Identities = 15/126 (11%), Positives = 43/126 (34%), Gaps = 3/126 (2%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++G +L + L L + + + + + R++ +DL + +
Sbjct: 4 TLDLTGKNLHPDVTGRL-LSQGVIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEVS 61
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
I + L ++L+ L+ + L +L L+L + +
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121
Query: 193 NIHGMY 198
+ +
Sbjct: 122 RLDELN 127
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (102), Expect = 3e-05
Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 10/110 (9%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V I + + + RE+ + +NH+N LL
Sbjct: 33 VCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 434 ----TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
LV + + ++ R ++ + G+K+LH
Sbjct: 92 EEFQDVYLVMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLH 136
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 42.7 bits (99), Expect = 4e-05
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L+ L L N + I P L L L + L NQ++ P + N + L +
Sbjct: 167 TPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIV 222
Query: 148 NLQSN 152
L +N
Sbjct: 223 TL-TN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.6 bits (96), Expect = 1e-04
Identities = 19/102 (18%), Positives = 26/102 (25%), Gaps = 6/102 (5%)
Query: 29 FWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINI-SGSSLKGFLA 87
L I L + A L + +
Sbjct: 131 LQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI-- 188
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129
L L L E+ L N + + P L L I+ L TNQ
Sbjct: 189 SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL-TNQ 227
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.5 bits (88), Expect = 0.001
Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
L + G + +T + +L G+ ++ G+T + + L +L L L N
Sbjct: 18 LANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTT-IEG-VQYLNNLIGLELKDN 73
Query: 177 RLQ 179
++
Sbjct: 74 QIT 76
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 1e-04
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 12/164 (7%)
Query: 360 EDFS--NIIGSSPDSLVYKG----TMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
E+F ++G+ V+ G A+ L + + E L
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
I L + + L+ DY + G L+ HL +R + + V I
Sbjct: 84 HIRQSPFLVTL-HYAFQTETKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVL 140
Query: 474 GLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517
L++LH ++ + L + ++ LS V+
Sbjct: 141 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA 181
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ E+ NL + P +L K IL L N L + T L ++NL
Sbjct: 9 VASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 7e-04
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
+ ++ LT +PP++ ++L N L A L L +L+LDR
Sbjct: 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 177 R 177
Sbjct: 66 E 66
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (87), Expect = 0.002
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 137 EIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
E+ + +++N LT LP +L LHL N L + YT
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLPK--DTTILHLSENLLYT-FSLATLMPYT 55
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (87), Expect = 0.002
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 102 HGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
NNL + L L+ L L L N L IP L L N
Sbjct: 156 ANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (86), Expect = 0.002
Identities = 15/65 (23%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124
S L++N +L P L L L N L L RL L+
Sbjct: 6 VSKV-ASHLEVNCDKRNLTAL--PP-DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 125 LGTNQ 129
L +
Sbjct: 62 LDRAE 66
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 4e-04
Identities = 10/82 (12%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
+L +T + L + +I ++ + + L ++ +L L+ N
Sbjct: 23 FAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGN 78
Query: 177 RLQGAVPAGSNSGYTANIHGMY 198
+L P +
Sbjct: 79 KLTDIKPLANLKNLGWLFLDEN 100
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.4 bits (91), Expect = 7e-04
Identities = 14/139 (10%), Positives = 35/139 (25%), Gaps = 11/139 (7%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
+++GT + I + + E + + Y +
Sbjct: 21 IFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 75
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
+LV D G E L + S + ++ +H ++
Sbjct: 76 -NVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKP 129
Query: 494 SAVYLTEDFSPKVSPLCLS 512
+ S + + +
Sbjct: 130 DNFLIGRPNSKNANMIYVV 148
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 521 | |||
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.98 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.98 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 99.98 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.97 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.97 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.97 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.97 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.97 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.97 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.97 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.97 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 99.97 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.97 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.97 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.97 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.97 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.97 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.97 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.96 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.96 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.96 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.96 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.96 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.96 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.96 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.96 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.96 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.96 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.96 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.96 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.96 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.96 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.96 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.96 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.96 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.95 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.95 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.95 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.95 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.95 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.95 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.95 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.95 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.95 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.94 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.94 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.94 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.94 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.93 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.93 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.93 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.93 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.92 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.92 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.91 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.87 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.83 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.82 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.81 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.78 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.77 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.74 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.71 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.71 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.64 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.62 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.59 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.56 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.55 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.53 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.51 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.51 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.5 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.5 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.49 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.48 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.46 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.42 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.39 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.35 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.34 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.23 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.23 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.22 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.2 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.1 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.91 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.74 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.67 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.62 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.45 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.35 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.28 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.28 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.24 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.16 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.67 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.61 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.33 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.95 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.89 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.2 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 95.84 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 95.35 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.2e-33 Score=276.14 Aligned_cols=160 Identities=24% Similarity=0.368 Sum_probs=129.1
Q ss_pred ccCHHHHHHHHhhhh-----------hhhCcCCCeeEEEEEeC-CCC---EEEEEEeeeeccccchhhHHHHHHHHHHHh
Q 009972 349 RFSRQELEVACEDFS-----------NIIGSSPDSLVYKGTMK-GGP---EIAVISLCIKEEHWTGYLELYFQREVADLA 413 (521)
Q Consensus 349 ~~~~~~l~~~~~~f~-----------~~lg~G~~g~Vy~~~~~-~~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~ 413 (521)
.++++|+..++.+|+ ++||+|+||+||+|+++ +++ .||||++... ......++|.+|+++++
T Consensus 6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~ 82 (299)
T d1jpaa_ 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG---YTEKQRRDFLSEASIMG 82 (299)
T ss_dssp GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS---CCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc---cCHHHHHHHHHHHHHHH
Confidence 356667777777764 57999999999999986 332 5788876432 22344568999999999
Q ss_pred ccCCCccceeeeEeecCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 009972 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493 (521)
Q Consensus 414 ~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~ 493 (521)
+++|||||+++|+|...+ ..++||||+++|+|.+++.... ..++|.++.+|+.|||+||+|||+. +|+||||||
T Consensus 83 ~l~HpnIv~l~g~~~~~~--~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp 156 (299)
T d1jpaa_ 83 QFDHPNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAA 156 (299)
T ss_dssp TCCCTTBCCEEEEECSSS--SCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred hCCCCCCccEEEEEeeCC--EEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhC---CCccCcccc
Confidence 999999999999998876 7899999999999999887433 3599999999999999999999998 999999999
Q ss_pred CCeeecCCCCeeeCCCchhhhccc
Q 009972 494 SAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 494 ~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|||||+++++||+|||+|+.+.+
T Consensus 157 ~NILl~~~~~~Kl~DFGla~~~~~ 180 (299)
T d1jpaa_ 157 RNILVNSNLVCKVSDFGLSRFLED 180 (299)
T ss_dssp GGEEECTTCCEEECCC--------
T ss_pred ceEEECCCCcEEECCcccceEccC
Confidence 999999999999999999998754
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-33 Score=273.58 Aligned_cols=144 Identities=24% Similarity=0.332 Sum_probs=130.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+++ +++.||||++.... ...++|.+|++++++++|||||+++|+|.+.+ ..++||||+
T Consensus 23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~iv~E~~ 95 (287)
T d1opja_ 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFM 95 (287)
T ss_dssp EETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECC
T ss_pred eEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-----chHHHHHHHHHHHHhCCCCCEecCCccEeeCC--eeEEEeecc
Confidence 78999999999999997 58889999874322 22457999999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.......++|..+..|+.|||.||+|||+. +|+||||||+|||+|+++.+||+|||+|+.+..
T Consensus 96 ~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 96 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 167 (287)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCS
T ss_pred cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCC
Confidence 999999999866566799999999999999999999999 999999999999999999999999999998754
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=2.7e-33 Score=270.02 Aligned_cols=143 Identities=17% Similarity=0.318 Sum_probs=127.9
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|++++++.||||++.... ...++|.+|++++++++|||||+++|+|.++ ..++||||++
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~---~~~iv~Ey~~ 90 (272)
T d1qpca_ 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITEYME 90 (272)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEECCT
T ss_pred EEEecCCCcEEEEEEECCCCEEEEEEEccCc-----CCHHHHHHHHHHHHhCCCCCEeEEEeeeccC---CeEEEEEeCC
Confidence 7899999999999999988899999984322 2245799999999999999999999998654 4789999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.......++|.++++|+.|||+||+|||+. +|+||||||+|||||+++.+||+|||+|+.+.+
T Consensus 91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~ 161 (272)
T d1qpca_ 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (272)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccC
Confidence 99999988754444699999999999999999999998 999999999999999999999999999998754
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=5.2e-33 Score=266.77 Aligned_cols=143 Identities=21% Similarity=0.301 Sum_probs=123.9
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|++.+++.||||++.... ...++|.+|++++++++|||||+++|+|...+ ..++||||++
T Consensus 11 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~--~~~lv~E~~~ 83 (263)
T d1sm2a_ 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEFME 83 (263)
T ss_dssp EEEECCSSCCEEEEEETTTEEEEEEECCSSS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCT
T ss_pred EEEeeCCCeEEEEEEECCCCEEEEEEECCCc-----CcHHHHHHHHHHHHhcCCCCcccccceeccCC--ceEEEEEecC
Confidence 7899999999999999988899999985322 22457999999999999999999999998877 7899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++... ...++|..+..|+.|||+||+|||+. +|+||||||+|||+|+++.+||+|||+|+.+.+
T Consensus 84 ~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~ 153 (263)
T d1sm2a_ 84 HGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 153 (263)
T ss_dssp TCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC-------
T ss_pred CCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccC
Confidence 99999998744 34689999999999999999999999 999999999999999999999999999997654
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1e-32 Score=265.30 Aligned_cols=143 Identities=20% Similarity=0.272 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.+ +|+.||||++..+.. ....+.+.+|++++++++|||||++++++.+++ ..++||||+
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~--~~~ivmEy~ 85 (271)
T d1nvra_ 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYC 85 (271)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhc---chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCc--eeEEEEecc
Confidence 78999999999999986 689999999864432 123356899999999999999999999999887 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ..+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 86 ~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~ 154 (271)
T d1nvra_ 86 SGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 154 (271)
T ss_dssp TTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECE
T ss_pred CCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeec
Confidence 999999999643 3599999999999999999999999 99999999999999999999999999999764
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.97 E-value=2.9e-32 Score=268.54 Aligned_cols=223 Identities=29% Similarity=0.470 Sum_probs=182.5
Q ss_pred CChhHHHHHHHHHHhhccCCCCCCCCCCCCCCCCC--CccceeeCCCC--CCEEEEEecCCCCcc--cCCccccCCCCCC
Q 009972 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPC--HWTGIACSDAR--DRVLKINISGSSLKG--FLAPELGLLTYLQ 97 (521)
Q Consensus 24 ~~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c--~w~gv~C~~~~--~~l~~L~L~~n~l~~--~~p~~l~~l~~L~ 97 (521)
|.++|++||++||+++. ||. .+++|.. +.||| .|.||+|+... .||+.|+|++|+++| .+|+++++|++|+
T Consensus 3 c~~~e~~aLl~~k~~~~-~~~-~l~sW~~-~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~ 79 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHHCC-CCC-cCCCCCC-CCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcccc
Confidence 67899999999999996 553 6899975 56899 59999998633 389999999999998 5889999999999
Q ss_pred EEEcCC-CcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCC
Q 009972 98 ELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 98 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
+|+|++ |+++|.+|.+|++|++|++|+|++|++++..|..+..+..|+.+++++|.+.+.+|..++++++|+.+++++|
T Consensus 80 ~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n 159 (313)
T d1ogqa_ 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeecccc
Confidence 999996 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCCCCc--c-c-------------------------------------------ccccccccccCCCCC----
Q 009972 177 RLQGAVPAGSNSG--Y-T-------------------------------------------ANIHGMYASSANLTG---- 206 (521)
Q Consensus 177 ~l~g~~p~~~~~~--~-~-------------------------------------------~~l~~l~l~~n~l~~---- 206 (521)
.++|.+|...... . . ..+..++++.|.+++
T Consensus 160 ~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~ 239 (313)
T d1ogqa_ 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9998888632110 0 0 011122333443332
Q ss_pred cccCCCCCEEeccCCccccCCcccccc---CCCcccCCCccCCCCC
Q 009972 207 LCHLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNKDP 249 (521)
Q Consensus 207 ~~~l~~L~~L~ls~N~l~g~ip~~l~~---l~~l~~~~N~l~~~~~ 249 (521)
+..+++|+.|+|++|+|+|.+|..+.+ |+.+++++|++++..|
T Consensus 240 ~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP 285 (313)
T d1ogqa_ 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred cccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCC
Confidence 344678999999999999999987755 5567889998875433
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.8e-32 Score=263.16 Aligned_cols=142 Identities=28% Similarity=0.442 Sum_probs=124.1
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|++++ .||||++..... .....+.|.+|+.++++++|||||+++|++.++ ..++||||++
T Consensus 14 ~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~---~~~lv~Ey~~ 86 (276)
T d1uwha_ 14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVTQWCE 86 (276)
T ss_dssp SEEEECSSCEEEEEESSS--EEEEEECCCSSC--CTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEECCC
T ss_pred EEEeeCCCcEEEEEEECC--EEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeeeEEEecc---EEEEEEecCC
Confidence 789999999999998754 599999854322 234467899999999999999999999998654 5799999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++... ..++|.++..|+.|||+||+|||+. +||||||||+|||+|+++.+||+|||+|+...
T Consensus 87 ~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~ 155 (276)
T d1uwha_ 87 GSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155 (276)
T ss_dssp EEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC--
T ss_pred CCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeecc
Confidence 999999997443 3599999999999999999999999 99999999999999999999999999998765
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.4e-32 Score=257.96 Aligned_cols=144 Identities=19% Similarity=0.293 Sum_probs=129.4
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||+||+|++++++.||||++..... .+++|.+|+.++++++|||||+++|+|.+++ ..++||||+
T Consensus 9 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-----~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~--~~~iv~Ey~ 81 (258)
T d1k2pa_ 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEYM 81 (258)
T ss_dssp CCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-----CHHHHHHHHHHHHTCCCTTBCCEEEEECCSS--SEEEEEECC
T ss_pred eEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-----CHHHHHHHHHHHHhcCCCceeeEEEEEeeCC--ceEEEEEcc
Confidence 378999999999999999888999999854332 2457999999999999999999999998877 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ..++|..+.+|+.|+|+||+|||+. +|+||||||+|||+|+++.+||+|||+|+.+.+
T Consensus 82 ~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 152 (258)
T d1k2pa_ 82 ANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152 (258)
T ss_dssp TTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSS
T ss_pred CCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccC
Confidence 9999999976433 3589999999999999999999999 999999999999999999999999999987654
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.6e-32 Score=261.38 Aligned_cols=156 Identities=21% Similarity=0.227 Sum_probs=123.4
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.+ +|+.||+|.+..... .....+.+.+|++++++++|||||++++++.+......+
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS--CHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC--CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEE
Confidence 3454 78999999999999986 689999999854432 234456799999999999999999999998764433689
Q ss_pred EEEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 437 LVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTEL--GPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
+||||+++|+|.+++... ....+++..+..|+.|++.||+|||+.. ..+|+||||||+|||+++++.+||+|||+|
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a 161 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 161 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence 999999999999998632 2346999999999999999999999861 124999999999999999999999999999
Q ss_pred hhccc
Q 009972 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+.+.+
T Consensus 162 ~~~~~ 166 (269)
T d2java1 162 RILNH 166 (269)
T ss_dssp HHC--
T ss_pred eeccc
Confidence 98754
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.1e-32 Score=258.74 Aligned_cols=146 Identities=21% Similarity=0.264 Sum_probs=129.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.+ +++.||+|++..... ......+.+.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 12 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~ivmEy~ 88 (263)
T d2j4za1 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYA 88 (263)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCCCcEEEEEEECCCCcEEEEEEEchHHc-cChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECC--EEEEEEeec
Confidence 78999999999999996 688999999854321 12234567899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+....
T Consensus 89 ~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~ 158 (263)
T d2j4za1 89 PLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 158 (263)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC
T ss_pred CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCC
Confidence 9999999997433 489999999999999999999999 999999999999999999999999999987654
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-31 Score=259.83 Aligned_cols=142 Identities=15% Similarity=0.218 Sum_probs=128.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 26 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ivmEy~ 99 (293)
T d1yhwa1 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYL 99 (293)
T ss_dssp EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEecccCh----HHHHHHHHHHHHHhCCCCCEeeEeEEEEECC--EEEEEEEec
Confidence 78999999999999985 7899999998543322 2457999999999999999999999999887 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... .+++.++..|+.|++.||+|||+. +|+||||||+|||++.++++||+|||+|+.+.+
T Consensus 100 ~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~ 168 (293)
T d1yhwa1 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (293)
T ss_dssp TTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeecc
Confidence 999999988643 489999999999999999999999 999999999999999999999999999997653
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4e-32 Score=268.27 Aligned_cols=149 Identities=17% Similarity=0.226 Sum_probs=131.3
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.. +|+.||+|++.... .....+++.+|+.++++++|||||+++++|.+.+ ..+
T Consensus 6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~ 80 (322)
T d1s9ja_ 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EIS 80 (322)
T ss_dssp GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC---CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSS--EEE
T ss_pred cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEE
Confidence 4565 78999999999999986 68899999985432 2234567999999999999999999999999887 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.+++.... .+++..+..++.|++.||.|||+++ +|+||||||+|||+++++++||+|||+|+.+.
T Consensus 81 iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~--~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 156 (322)
T d1s9ja_ 81 ICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156 (322)
T ss_dssp EEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEccccCHHHeeECCCCCEEEeeCCCccccC
Confidence 9999999999999997443 4899999999999999999999731 89999999999999999999999999999765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 157 ~ 157 (322)
T d1s9ja_ 157 D 157 (322)
T ss_dssp H
T ss_pred C
Confidence 4
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-31 Score=259.69 Aligned_cols=143 Identities=22% Similarity=0.292 Sum_probs=124.8
Q ss_pred hhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~lg~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||+||+|.++ ++..||||.+.... .....++|.+|++++++++|||||+++|+|.++ ..++||||
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~---~~~lvmE~ 89 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVMEM 89 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEEC
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhc---CHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC---eEEEEEEe
Confidence 4999999999999875 34579999985322 234456899999999999999999999999764 58999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++|+|.+++... ...++|.++.+|+.|||+||+|||+. +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 90 ~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~ 161 (285)
T d1u59a_ 90 AGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 161 (285)
T ss_dssp CTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred CCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhcccc
Confidence 9999999998633 34699999999999999999999999 999999999999999999999999999997653
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-31 Score=258.81 Aligned_cols=144 Identities=24% Similarity=0.286 Sum_probs=124.4
Q ss_pred hhhCcCCCeeEEEEEeCC---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||+||+|.+++ ++.||||++.... .+....++|.+|++++++++|||||+++|+|.++ ..++|||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~---~~~lvmE 87 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVME 87 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh--CCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC---CEEEEEE
Confidence 469999999999998753 4679999985332 2234457899999999999999999999999754 4789999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+++|+|.++++... .++|.++.+|+.|||+||+|||+. +|+||||||+|||++.++.+||+|||+|+.+.+
T Consensus 88 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~ 159 (277)
T d1xbba_ 88 MAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 159 (277)
T ss_dssp CCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred cCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhccc
Confidence 999999999997543 599999999999999999999998 999999999999999999999999999987643
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.9e-31 Score=256.27 Aligned_cols=151 Identities=25% Similarity=0.264 Sum_probs=127.6
Q ss_pred hhhhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC--CCCceEEE
Q 009972 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLV 438 (521)
Q Consensus 362 f~~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lv 438 (521)
|.+.||+|+||+||+|+.. ++..||+|++..+.. .....+.|.+|++++++++|||||++++++.+. +....++|
T Consensus 13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 3467999999999999986 688999999854432 234456799999999999999999999998652 22257999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld-~~~~~kl~DfGla~~~~~ 517 (521)
|||+++|+|.+++.... .+++..+..|+.||++||+|||++ .++|+||||||+|||++ +++.+||+|||+|+....
T Consensus 91 mE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence 99999999999997443 589999999999999999999997 22399999999999996 579999999999997553
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.3e-32 Score=262.15 Aligned_cols=143 Identities=20% Similarity=0.296 Sum_probs=125.1
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|+++++..||||++.... ...+.|.+|+.++++++|||||+++|+|.++ ..++||||++
T Consensus 23 ~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-----~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~---~~~lv~Ey~~ 94 (285)
T d1fmka3 23 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMS 94 (285)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEECCCT
T ss_pred eEEeeCCCeEEEEEEECCCCEEEEEEECccc-----CCHHHHHHHHHHHHhcccCCEeEEEEEEecC---CeEEEEEecC
Confidence 7899999999999999988889999984322 1245799999999999999999999999653 5789999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.......++|.+++.|+.|||+||+|||+. +|+||||||+|||||+++++||+|||+|+.+.+
T Consensus 95 ~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~ 165 (285)
T d1fmka3 95 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 165 (285)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccC
Confidence 99999998754444699999999999999999999999 999999999999999999999999999987653
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-31 Score=259.50 Aligned_cols=143 Identities=19% Similarity=0.158 Sum_probs=127.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. ++..||||++..... ...+.|.+|++++++++|||||++++++.+++ ..++||||+
T Consensus 18 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~lvmEy~ 91 (288)
T d2jfla1 18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELEDYMVEIDILASCDHPNIVKLLDAFYYEN--NLWILIEFC 91 (288)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSSS----GGGGGTHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCH----HHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--eEEEEEecC
Confidence 67999999999999986 688999999854322 23456899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... ..+++.++..|+.|++.||+|||+. +|+||||||+|||++.++++||+|||+|+.+.
T Consensus 92 ~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~ 161 (288)
T d2jfla1 92 AGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 161 (288)
T ss_dssp TTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECH
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccC
Confidence 9999999986432 3599999999999999999999999 99999999999999999999999999997654
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=2.6e-31 Score=260.24 Aligned_cols=146 Identities=17% Similarity=0.159 Sum_probs=128.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||||++..... ......+.+.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 21 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~iv~E~~ 97 (309)
T d1u5ra_ 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYC 97 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEECCSS-CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEchhhc-cCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECC--EEEEEEEec
Confidence 78999999999999986 688999999854432 22334567999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|..++..+ .++++.++..|+.||+.||.|||+. +|+||||||+|||+++++++||+|||+|+....
T Consensus 98 ~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~ 167 (309)
T d1u5ra_ 98 LGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (309)
T ss_dssp SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred CCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence 999998776543 3599999999999999999999999 999999999999999999999999999987654
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.1e-31 Score=257.05 Aligned_cols=145 Identities=26% Similarity=0.375 Sum_probs=122.8
Q ss_pred hhhCcCCCeeEEEEEeCCC-----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMKGG-----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
++||+|+||+||+|++++. ..||||++... .......+|.+|++++++++|||||+++|+|.+.+ ..++|
T Consensus 13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~--~~~~v 87 (283)
T d1mqba_ 13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG---YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PMMII 87 (283)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT---CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEE
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc---cChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCC--ceEEE
Confidence 7899999999999998642 36999988432 22334567999999999999999999999998877 78999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++|++.+++.... ..++|.++.+|+.|||.||+|||+. +|+||||||+|||||.++.+||+|||+|+.+.+
T Consensus 88 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~ 162 (283)
T d1mqba_ 88 TEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 162 (283)
T ss_dssp EECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccC
Confidence 99999999999886433 3699999999999999999999999 999999999999999999999999999998653
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.6e-31 Score=257.69 Aligned_cols=145 Identities=21% Similarity=0.201 Sum_probs=129.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++..... ......+.+.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~ivmEy~ 90 (288)
T d1uu3a_ 14 KILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFGLSYA 90 (288)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHc-cCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECC--EEEEEEEcc
Confidence 78999999999999986 789999999854321 11223467999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 91 ~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~ 159 (288)
T d1uu3a_ 91 KNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 159 (288)
T ss_dssp TTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecc
Confidence 9999999987443 489999999999999999999999 99999999999999999999999999999764
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.1e-30 Score=258.31 Aligned_cols=146 Identities=23% Similarity=0.323 Sum_probs=123.8
Q ss_pred hhhCcCCCeeEEEEEeCC-C-----CEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMKG-G-----PEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||+||+|++.. + ..||+|++..... ......|.+|+.++.++ +|||||+++++|.+.+ ..+
T Consensus 43 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~ 117 (325)
T d1rjba_ 43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD---SSEREALMSELKMMTQLGSHENIVNLLGACTLSG--PIY 117 (325)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCE
T ss_pred eEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC---HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC--eEE
Confidence 899999999999999853 2 2588888743322 23346799999999998 8999999999999877 789
Q ss_pred EEEeeCCCCChhhhhhcCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 009972 437 LVFDYASNGTLYEHLHYGE---------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~---------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~N 495 (521)
+||||+++|+|.++++... ...++|..++.|+.||++||+|||+. +||||||||+|
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp~N 194 (325)
T d1rjba_ 118 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARN 194 (325)
T ss_dssp EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGG
T ss_pred EEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCchhc
Confidence 9999999999999997432 13589999999999999999999999 99999999999
Q ss_pred eeecCCCCeeeCCCchhhhccc
Q 009972 496 VYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 496 ILld~~~~~kl~DfGla~~~~~ 517 (521)
||++.++.+||+|||+|+...+
T Consensus 195 ill~~~~~~Kl~DFGla~~~~~ 216 (325)
T d1rjba_ 195 VLVTHGKVVKICDFGLARDIMS 216 (325)
T ss_dssp EEEETTTEEEECCCGGGSCGGG
T ss_pred cccccCCeEEEeeccccccccC
Confidence 9999999999999999987654
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=1.2e-30 Score=251.70 Aligned_cols=147 Identities=22% Similarity=0.232 Sum_probs=130.1
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc-----chhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW-----TGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-----~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||+||+|+.. +|+.||||++....... .....+.+.+|+.++++++ |||||++++++.+++ ..+
T Consensus 9 ~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~~~ 86 (277)
T d1phka_ 9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--FFF 86 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEE
T ss_pred eEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc--ceE
Confidence 78999999999999985 78899999986543211 1223457899999999997 999999999999877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.++++... .+++.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 87 ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 161 (277)
T d1phka_ 87 LVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 161 (277)
T ss_dssp EEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchheeEcc
Confidence 9999999999999997543 599999999999999999999999 99999999999999999999999999999876
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 162 ~ 162 (277)
T d1phka_ 162 P 162 (277)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.6e-30 Score=255.53 Aligned_cols=151 Identities=15% Similarity=0.176 Sum_probs=131.4
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.+ +|+.||||++..... ......+.+.+|+.++++++|||||++++++.+.+ ..+
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ 80 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIF 80 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHc-cCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCC--eee
Confidence 3454 78999999999999986 689999999853321 11223567999999999999999999999999877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|..++.... .+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 81 ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~ 155 (316)
T d1fota_ 81 MIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 155 (316)
T ss_dssp EEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred eEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEec
Confidence 9999999999999987544 478999999999999999999999 99999999999999999999999999999876
Q ss_pred cc
Q 009972 517 SS 518 (521)
Q Consensus 517 ~~ 518 (521)
+.
T Consensus 156 ~~ 157 (316)
T d1fota_ 156 DV 157 (316)
T ss_dssp SC
T ss_pred cc
Confidence 43
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2e-30 Score=254.41 Aligned_cols=149 Identities=24% Similarity=0.317 Sum_probs=127.3
Q ss_pred hhhhhhCcCCCeeEEEEEeCCC----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 361 DFSNIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 361 ~f~~~lg~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
+|+++||+|+||+||+|++.++ ..||||++... ......++|.+|++++++++|||||+++|+|...+. ..+
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~~~ 105 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPL 105 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCC---CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTT-EEE
T ss_pred ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc---cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCC-ceE
Confidence 3457899999999999998642 25899988422 223455789999999999999999999999875432 689
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.++++... ..+++..+++++.|+|.||.|+|+. +|+||||||+|||+|+++.+||+|||+++.+.
T Consensus 106 lv~E~~~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~ 181 (311)
T d1r0pa_ 106 VVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 181 (311)
T ss_dssp EEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTT
T ss_pred EEEEEeecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhcc
Confidence 9999999999999987443 3578999999999999999999999 99999999999999999999999999999765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 182 ~ 182 (311)
T d1r0pa_ 182 D 182 (311)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.96 E-value=6.5e-31 Score=257.18 Aligned_cols=155 Identities=26% Similarity=0.334 Sum_probs=132.2
Q ss_pred HHHHHhhhh--hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeE
Q 009972 355 LEVACEDFS--NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426 (521)
Q Consensus 355 l~~~~~~f~--~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 426 (521)
++...++|. +.||+|+||+||+|+++ +++.||||++.... .....++|.+|++++++++||||++++++
T Consensus 8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~ 84 (301)
T d1lufa_ 8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGV 84 (301)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc---ChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence 333445665 88999999999999975 34689999984322 23446789999999999999999999999
Q ss_pred eecCCCCceEEEEeeCCCCChhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 009972 427 CRESSPFTRMLVFDYASNGTLYEHLHYGE----------------------RCQVSWTRRMKIVIGIARGLKYLHTELGP 484 (521)
Q Consensus 427 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 484 (521)
|.+.+ ..++||||+++|+|.++++... ...++|.+++.|+.|+|.||+|||+.
T Consensus 85 ~~~~~--~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~--- 159 (301)
T d1lufa_ 85 CAVGK--PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--- 159 (301)
T ss_dssp ECSSS--SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eccCC--ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---
Confidence 98877 7899999999999999986321 23489999999999999999999999
Q ss_pred CeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 485 PFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 485 ~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+||||||||+|||+|.++++||+|||+|+.+.+
T Consensus 160 ~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~ 192 (301)
T d1lufa_ 160 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 192 (301)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTG
T ss_pred CeEeeEEcccceEECCCCcEEEccchhheeccC
Confidence 999999999999999999999999999997654
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.1e-30 Score=256.59 Aligned_cols=149 Identities=19% Similarity=0.145 Sum_probs=131.1
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.+ +|+.||+|++..... ......+.+.+|+.++++++|||||++++++.+.+ ..+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~ 81 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLC 81 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccc--ccc
Confidence 4454 78999999999999986 789999999854321 11233567899999999999999999999999887 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+|+++.+||+|||+|+.+.
T Consensus 82 iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~ 156 (337)
T d1o6la_ 82 FVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred cceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccc
Confidence 9999999999999997544 489999999999999999999999 99999999999999999999999999999754
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.96 E-value=1.9e-30 Score=254.07 Aligned_cols=144 Identities=19% Similarity=0.212 Sum_probs=117.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.+ +++.||||.+...... ...+.+.+|++++++++|||||++++++.+++ ..++||||+
T Consensus 15 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~lvmE~~ 89 (307)
T d1a06a_ 15 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE---GKEGSMENEIAVLHKIKHPNIVALDDIYESGG--HLYLIMQLV 89 (307)
T ss_dssp EESBSGGGGGEEEEEETTTCCEEEEEEEEC-------------CHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEecc
Confidence 78999999999999986 6899999998644322 22356889999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld---~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+|+...+
T Consensus 90 ~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~ 162 (307)
T d1a06a_ 90 SGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 162 (307)
T ss_dssp CSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred CCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence 9999999997543 599999999999999999999999 999999999999994 578999999999997654
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.3e-30 Score=251.09 Aligned_cols=147 Identities=20% Similarity=0.251 Sum_probs=129.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc--cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||+||+|+.+ +|+.||||.+...... ......+.|.+|+.++++++|||||++++++.+.+ ..++|||
T Consensus 16 ~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~iv~E 93 (293)
T d1jksa_ 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILILE 93 (293)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEE
Confidence 78999999999999986 7899999998654321 12224578999999999999999999999999887 8999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~----~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+|+.+.
T Consensus 94 ~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~ 168 (293)
T d1jksa_ 94 LVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168 (293)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECT
T ss_pred cCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhhhhcC
Confidence 999999999997543 599999999999999999999999 999999999999998776 49999999998765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 169 ~ 169 (293)
T d1jksa_ 169 F 169 (293)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.96 E-value=4.2e-30 Score=256.13 Aligned_cols=144 Identities=15% Similarity=0.196 Sum_probs=128.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 35 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~ivmE~~ 108 (352)
T d1koba_ 35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLILEFL 108 (352)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECCcc----hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEEcC
Confidence 78999999999999986 78999999985432 123457889999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld--~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ...+++.+...|+.||+.||+|||+. +|+||||||+|||++ +++.+||+|||+|+.+.+
T Consensus 109 ~gg~L~~~~~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~ 181 (352)
T d1koba_ 109 SGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 181 (352)
T ss_dssp CCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCC
Confidence 999999987633 33599999999999999999999999 999999999999998 678999999999998754
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.96 E-value=3.5e-30 Score=256.49 Aligned_cols=148 Identities=14% Similarity=0.251 Sum_probs=129.6
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.++++++|||||++++++.+.+ ..+
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~----~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ 99 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMV 99 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETT--EEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc----hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEE
Confidence 3454 78999999999999986 68999999985432 223567899999999999999999999999877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCCeeeCCCchhhh
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld--~~~~~kl~DfGla~~ 514 (521)
+|||||++|+|.+++.... ..+++..+..|+.||+.||+|||+. +||||||||+|||++ .++.+||+|||+|+.
T Consensus 100 ivmE~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~ 175 (350)
T d1koaa2 100 MIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 175 (350)
T ss_dssp EEECCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEEcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchhee
Confidence 9999999999999996433 3599999999999999999999999 999999999999996 467899999999987
Q ss_pred ccc
Q 009972 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
+.+
T Consensus 176 ~~~ 178 (350)
T d1koaa2 176 LDP 178 (350)
T ss_dssp CCT
T ss_pred ccc
Confidence 754
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1e-30 Score=250.07 Aligned_cols=143 Identities=24% Similarity=0.309 Sum_probs=120.7
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+++ |..||||++... ...++|.+|++++++++|||||+++|+|.+++. ..++||||++
T Consensus 13 ~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~------~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~~~lv~ey~~ 84 (262)
T d1byga_ 13 QTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMA 84 (262)
T ss_dssp EEEEECSSCEEEEEEET-TEEEEEEECCCC------C--HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECCCT
T ss_pred EEEecCCCeEEEEEEEC-CeEEEEEEECcH------HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCC-cEEEEEeccC
Confidence 78999999999999995 678999998432 124579999999999999999999999965432 5799999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......++|..+++|+.|||.||+|||+. +|+||||||+|||+++++.+||+|||+++...+
T Consensus 85 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 85 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 155 (262)
T ss_dssp TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCC
Confidence 99999999754444589999999999999999999998 999999999999999999999999999998654
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=9.7e-30 Score=253.43 Aligned_cols=151 Identities=17% Similarity=0.139 Sum_probs=131.9
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceE
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.+ +|+.||||++..... ......+.+.+|+.+++.++|||||++++++.+.. ..+
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~ 117 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLY 117 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHc-cCHHHHHHHHHHHHHHHHcCCCcEeeccccccccc--ccc
Confidence 3454 78999999999999986 789999999854321 11223457899999999999999999999999877 899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||+.+|+|.+++.... .+++.....|+.||+.||.|||+. +||||||||+|||++.++.+||+|||+|+.+.
T Consensus 118 ~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~ 192 (350)
T d1rdqe_ 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeecc
Confidence 9999999999999997543 489999999999999999999999 99999999999999999999999999999876
Q ss_pred cc
Q 009972 517 SS 518 (521)
Q Consensus 517 ~~ 518 (521)
+.
T Consensus 193 ~~ 194 (350)
T d1rdqe_ 193 GR 194 (350)
T ss_dssp SC
T ss_pred cc
Confidence 53
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.6e-29 Score=249.02 Aligned_cols=143 Identities=12% Similarity=0.163 Sum_probs=126.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||||.+..+. .....+.+|+++|+.++|||||++++++.+.+ ..|+||||+
T Consensus 11 ~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-----~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~lvmE~~ 83 (321)
T d1tkia_ 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIFEFI 83 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-----ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEecC
Confidence 78999999999999986 68899999985432 22456889999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC--CCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED--FSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~--~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ..+++.++..|+.||+.||+|||+. +|+||||||+|||++.+ ..+||+|||+++....
T Consensus 84 ~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~ 156 (321)
T d1tkia_ 84 SGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence 9999999996433 3589999999999999999999999 99999999999999854 5899999999987653
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.3e-29 Score=249.76 Aligned_cols=144 Identities=22% Similarity=0.293 Sum_probs=122.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
++||+|+||+||+|++. +|+ .||+|++... ......++|.+|++++++++|||||+++|+|.+. ..+++
T Consensus 15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~---~~~~v 88 (317)
T d1xkka_ 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLI 88 (317)
T ss_dssp EEEEECSSEEEEEEEECC----CCEEEEEEEECC-------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEE
T ss_pred eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc---cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CeeEE
Confidence 78999999999999986 454 4778776422 2233456899999999999999999999999875 47899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+||+.+|+|.+++... ...++|..+.+|+.|||+||+|||+. +|+||||||+|||+|.++.+||+|||+|+.+..
T Consensus 89 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 163 (317)
T d1xkka_ 89 TQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163 (317)
T ss_dssp EECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred EEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence 9999999999988744 34689999999999999999999999 999999999999999999999999999998643
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7e-30 Score=249.68 Aligned_cols=147 Identities=20% Similarity=0.188 Sum_probs=123.4
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||+||+|+.+ +|+.||||++...... ......+.+.+|+.++++++|||||++++++.+.+ ..++||||
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~--~~~ivmE~ 81 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLVFDF 81 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEEEEC
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCC--ceeehhhh
Confidence 57999999999999986 6899999998544321 11122356899999999999999999999999877 79999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
+++|++..+... ...+++.++..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.+
T Consensus 82 ~~~~~~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~ 152 (299)
T d1ua2a_ 82 METDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 152 (299)
T ss_dssp CSEEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred hcchHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCC
Confidence 999877766542 34589999999999999999999999 999999999999999999999999999987654
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=1.4e-29 Score=253.67 Aligned_cols=146 Identities=18% Similarity=0.079 Sum_probs=124.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHH---HHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQ---REVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~---~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||+||+|+.. +|+.||||++...... .......+. +|+.+++.++|||||++++++.+.+ ..++||
T Consensus 10 ~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~--~~~ivm 86 (364)
T d1omwa3 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFIL 86 (364)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEchHHcc-hhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC--EEEEEE
Confidence 78999999999999986 6899999998543211 111222344 4467778889999999999999877 899999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 87 E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 87 DLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp CCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 9999999999997543 489999999999999999999999 999999999999999999999999999997654
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=6.6e-30 Score=246.10 Aligned_cols=146 Identities=21% Similarity=0.242 Sum_probs=118.3
Q ss_pred hhhCcCCCeeEEEEEeC--CC--CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK--GG--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~--~~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||+||+|++. ++ ..||||++..... ......++|.+|++++++++|||||+++|+|.++ ..++||
T Consensus 14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~-~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~---~~~lv~ 89 (273)
T d1u46a_ 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---PMKMVT 89 (273)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec---chheee
Confidence 78999999999999874 23 3689998744322 2234456899999999999999999999999764 478999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|++.+++.... ..++|..++.++.|+|.||.|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 90 e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 90 ELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp ECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 9999999999886433 3599999999999999999999998 999999999999999999999999999997643
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.3e-29 Score=246.79 Aligned_cols=146 Identities=18% Similarity=0.304 Sum_probs=127.2
Q ss_pred hhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||+||+|+++ ++..||||++... ........|.+|+.++++++|||||+++|+|.... ..++
T Consensus 26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~---~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~l 100 (308)
T d1p4oa_ 26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLV 100 (308)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT---SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--SCEE
T ss_pred eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc---cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCC--ceeE
Confidence 78999999999999874 2568999998422 12334567999999999999999999999998776 7899
Q ss_pred EEeeCCCCChhhhhhcC--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCC
Q 009972 438 VFDYASNGTLYEHLHYG--------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~Df 509 (521)
||||+++|+|.++++.. ....++|..+.+|+.|+|+||.|||+. +|+||||||+|||+|+++++||+||
T Consensus 101 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~DF 177 (308)
T d1p4oa_ 101 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 177 (308)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCT
T ss_pred EEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEeec
Confidence 99999999999998631 223579999999999999999999999 9999999999999999999999999
Q ss_pred chhhhccc
Q 009972 510 CLSFLLVS 517 (521)
Q Consensus 510 Gla~~~~~ 517 (521)
|+|+.+.+
T Consensus 178 Gla~~~~~ 185 (308)
T d1p4oa_ 178 GMTRDIYE 185 (308)
T ss_dssp TCCCGGGG
T ss_pred ccceeccC
Confidence 99997754
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.8e-29 Score=245.16 Aligned_cols=149 Identities=20% Similarity=0.286 Sum_probs=126.1
Q ss_pred hhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEE
Q 009972 361 DFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 361 ~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+|. +.||+|+||+||+|+.. +|+.||||++..... .....+++.+|++++++++|||||++++++.+.+ ..++
T Consensus 3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~--~~~i 78 (298)
T d1gz8a_ 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYL 78 (298)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--ChHHHHHHHHHHHHHHhCCCCcEEEecccccccc--ceeE
Confidence 454 78999999999999985 789999999854321 1233467999999999999999999999999877 8999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 438 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||||+.+ ++.+++.......+++..+..++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+....
T Consensus 79 v~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~ 154 (298)
T d1gz8a_ 79 VFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 154 (298)
T ss_dssp EEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccC
Confidence 9999986 555555444445699999999999999999999999 999999999999999999999999999987653
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2e-29 Score=246.53 Aligned_cols=145 Identities=23% Similarity=0.315 Sum_probs=120.3
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC--CceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~ey 441 (521)
+.||+|+||.||+|++ +|+.||||++.... .....+..|+..+..++|||||+++|+|.+.+. ...++||||
T Consensus 9 ~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~-----~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey 82 (303)
T d1vjya_ 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEECCSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence 7899999999999997 56899999884321 112223445566678899999999999976542 257899999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|++|+|.++++.. .++|.++.+++.++|.||+|+|+.+ .++|+||||||+|||||+++.+||+|||+++.+.
T Consensus 83 ~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~ 159 (303)
T d1vjya_ 83 HEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred ccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccccc
Confidence 9999999999753 4899999999999999999999732 3499999999999999999999999999999765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 160 ~ 160 (303)
T d1vjya_ 160 S 160 (303)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.96 E-value=3.5e-29 Score=243.08 Aligned_cols=145 Identities=17% Similarity=0.191 Sum_probs=128.3
Q ss_pred hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeCC
Q 009972 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|+.++|+.||||++..... .....+.+.+|+.++++++|||||++++++..++ ..++++||+.
T Consensus 8 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~i~~e~~~ 83 (286)
T d1ob3a_ 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEHLD 83 (286)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEECCS
T ss_pred cEEecCCCcEEEEEEeCCCCEEEEEEEehhhc--ChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCC--ceeEEEEeeh
Confidence 78999999999999999999999999854332 2233567999999999999999999999999887 8999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
++.+..+.+.. ..+++.++..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|.....
T Consensus 84 ~~~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~ 152 (286)
T d1ob3a_ 84 QDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGI 152 (286)
T ss_dssp EEHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred hhhHHHHHhhc--CCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceeccc
Confidence 87777666433 3599999999999999999999999 999999999999999999999999999988654
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=4.2e-29 Score=245.10 Aligned_cols=146 Identities=23% Similarity=0.362 Sum_probs=124.4
Q ss_pred hhhCcCCCeeEEEEEeCC-CC--EEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG-GP--EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||+||+|++++ +. .||||++.... .....++|.+|++++.++ +|||||+++|+|.+.+ ..++||
T Consensus 16 ~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~iV~ 90 (309)
T d1fvra_ 16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLAI 90 (309)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc---ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCC--eeEEEE
Confidence 789999999999999874 44 46777764222 122345799999999999 7999999999999877 899999
Q ss_pred eeCCCCChhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCee
Q 009972 440 DYASNGTLYEHLHYG--------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 440 ey~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~k 505 (521)
||+++|+|.++++.. ....++|..+.+++.|||+||.|+|+. +|+||||||+|||+++++.+|
T Consensus 91 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~k 167 (309)
T d1fvra_ 91 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 167 (309)
T ss_dssp CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEE
T ss_pred EecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCceE
Confidence 999999999999743 235699999999999999999999999 999999999999999999999
Q ss_pred eCCCchhhhccc
Q 009972 506 VSPLCLSFLLVS 517 (521)
Q Consensus 506 l~DfGla~~~~~ 517 (521)
|+|||+|+....
T Consensus 168 l~DfG~a~~~~~ 179 (309)
T d1fvra_ 168 IADFGLSRGQEV 179 (309)
T ss_dssp ECCTTCEESSCE
T ss_pred Eccccccccccc
Confidence 999999987553
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=4.3e-29 Score=240.69 Aligned_cols=144 Identities=16% Similarity=0.230 Sum_probs=116.9
Q ss_pred hhhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||+||+|++.. +..||||.+... ......+.|.+|+.++++++|||||+++|++.++ ..++||
T Consensus 13 ~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~~iv~ 86 (273)
T d1mp8a_ 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIM 86 (273)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTT---TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc---cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---eEEEEE
Confidence 789999999999998853 235778776322 2234456799999999999999999999999653 589999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.... ..+++.++..++.||++||+|||+. +|+||||||+||++++++.+||+|||+|+.+..
T Consensus 87 E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~ 160 (273)
T d1mp8a_ 87 ELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160 (273)
T ss_dssp ECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccC
Confidence 9999999999876433 3689999999999999999999999 999999999999999999999999999997653
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.9e-29 Score=244.28 Aligned_cols=146 Identities=19% Similarity=0.235 Sum_probs=116.2
Q ss_pred hhhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCceE
Q 009972 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||+||+|++.. ++.||||++.... .....+.+.+|+..+.++ +|+|||.+++++..++. ..+
T Consensus 19 ~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~-~~~ 94 (299)
T d1ywna1 19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLM 94 (299)
T ss_dssp EEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS-CCE
T ss_pred eEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC-eEE
Confidence 889999999999998742 4579999984322 223456788888888887 78999999999876542 589
Q ss_pred EEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 009972 437 LVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~ 502 (521)
+||||+++|+|.++++... ...++|.++..|+.||++||+|||+. +||||||||+||||++++
T Consensus 95 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~~~~ 171 (299)
T d1ywna1 95 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKN 171 (299)
T ss_dssp EEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGG
T ss_pred EEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeECCCC
Confidence 9999999999999997431 23589999999999999999999999 999999999999999999
Q ss_pred CeeeCCCchhhhcc
Q 009972 503 SPKVSPLCLSFLLV 516 (521)
Q Consensus 503 ~~kl~DfGla~~~~ 516 (521)
++||+|||+|+...
T Consensus 172 ~~Kl~DFGla~~~~ 185 (299)
T d1ywna1 172 VVKICDFGLARDIY 185 (299)
T ss_dssp CEEECC------CC
T ss_pred cEEEccCcchhhcc
Confidence 99999999998754
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=5.3e-29 Score=245.10 Aligned_cols=145 Identities=16% Similarity=0.174 Sum_probs=125.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHh-ccCCCccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLA-RINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.+ +++.||||++...... .....+.+.+|+.++. .++|||||++++++.+.+ ..++||||
T Consensus 8 ~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~-~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~--~~yivmEy 84 (320)
T d1xjda_ 8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFFVMEY 84 (320)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred eEEecCCCcEEEEEEECCCCCEEEEEEEchhhcc-ChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC--ceeEEEee
Confidence 78999999999999997 6889999998543211 1223345677777765 689999999999999887 89999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.++++... .+++.++..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+...
T Consensus 85 ~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~ 154 (320)
T d1xjda_ 85 LNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENM 154 (320)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred cCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcc
Confidence 99999999997543 489999999999999999999999 99999999999999999999999999998654
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.1e-28 Score=242.32 Aligned_cols=147 Identities=18% Similarity=0.242 Sum_probs=127.7
Q ss_pred hhhhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCce
Q 009972 363 SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+.||+|+||.||+|++. +++.||||++.... ......+|.+|+.++.++ +|||||+++|+|.+.+ ..
T Consensus 28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~--~~ 102 (311)
T d1t46a_ 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG--PT 102 (311)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SC
T ss_pred eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc---CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC--EE
Confidence 378999999999999863 35689999985332 223456799999999999 6999999999998877 78
Q ss_pred EEEEeeCCCCChhhhhhcCC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 009972 436 MLVFDYASNGTLYEHLHYGE----------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld 499 (521)
++||||+++|+|.++++... ...+++..+.+|+.|||+||+|||++ ++|||||||+||+++
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~~ 179 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT 179 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeeccccccccccc
Confidence 99999999999999997432 23589999999999999999999999 999999999999999
Q ss_pred CCCCeeeCCCchhhhccc
Q 009972 500 EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~~ 517 (521)
.++.+|++|||+++.+..
T Consensus 180 ~~~~~ki~DfG~~~~~~~ 197 (311)
T d1t46a_ 180 HGRITKICDFGLARDIKN 197 (311)
T ss_dssp TTTEEEECCCGGGSCTTS
T ss_pred ccCcccccccchheeccC
Confidence 999999999999997654
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.95 E-value=1.8e-28 Score=236.87 Aligned_cols=147 Identities=17% Similarity=0.212 Sum_probs=127.6
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC--CceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e 440 (521)
+.||+|+||+||+|+.. +|+.||||.+..... .+....+.|.+|++++++++|||||++++++...+. ...++|||
T Consensus 13 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE 91 (277)
T d1o6ya_ 13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 91 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTT-TCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhc-cCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEE
Confidence 78999999999999985 789999999854322 223445679999999999999999999999876442 24789999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++.... .+++.++..|+.||+.||+|||+. +|+||||||+|||++.++..+|+|||+++...
T Consensus 92 ~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~ 162 (277)
T d1o6ya_ 92 YVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA 162 (277)
T ss_dssp CCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEECC
T ss_pred CCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhhc
Confidence 999999999886443 589999999999999999999999 99999999999999999999999999987653
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.6e-28 Score=243.24 Aligned_cols=142 Identities=14% Similarity=0.142 Sum_probs=122.0
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecC--CCCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES--SPFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~~~lv~ 439 (521)
++||+|+||+||+|+.. +++.||||++.. ...+.+|++++.++ +|||||++++++.+. .....++||
T Consensus 18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~---------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivm 88 (335)
T d2ozaa1 18 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 88 (335)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEeeeccCeEEEEEEECCCCCEEEEEEECC---------cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEE
Confidence 57999999999999985 789999999832 13477899987665 899999999998652 112689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeeeCCCchhhhcc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~---~~~~kl~DfGla~~~~ 516 (521)
|||++|+|.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||+++ ++.+||+|||+|+...
T Consensus 89 Ey~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~ 165 (335)
T d2ozaa1 89 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 165 (335)
T ss_dssp ECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTTCEECC
T ss_pred ECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccceeeecc
Confidence 999999999999865555799999999999999999999999 9999999999999985 5679999999998765
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 166 ~ 166 (335)
T d2ozaa1 166 S 166 (335)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.9e-28 Score=237.93 Aligned_cols=146 Identities=25% Similarity=0.275 Sum_probs=121.8
Q ss_pred hhhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCccceeeeEeecCCCCc
Q 009972 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||.||+|+..+ +..||||++.... ......++.+|+..+.++ +|||||+++++|.++. .
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~--~ 93 (299)
T d1fgka_ 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--P 93 (299)
T ss_dssp EECC-----CEEEEEEECC----CCCEEEEEEECCCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc---ChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC--e
Confidence 789999999999998743 2379999884322 223456789999999988 8999999999999876 7
Q ss_pred eEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 009972 435 RMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 435 ~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~ 500 (521)
.++||||+++|+|.++++... ...++|.++++++.|+|.||+|||+. +||||||||+|||++.
T Consensus 94 ~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl~~ 170 (299)
T d1fgka_ 94 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTE 170 (299)
T ss_dssp CEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECT
T ss_pred EEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceeecC
Confidence 999999999999999997442 23589999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhccc
Q 009972 501 DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~~ 517 (521)
++.+||+|||+++...+
T Consensus 171 ~~~~kl~dfg~~~~~~~ 187 (299)
T d1fgka_ 171 DNVMKIADFGLARDIHH 187 (299)
T ss_dssp TCCEEECSTTCCCCGGG
T ss_pred CCCeEeccchhhccccc
Confidence 99999999999997754
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.1e-28 Score=235.69 Aligned_cols=148 Identities=11% Similarity=0.099 Sum_probs=124.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc--chhhHHHHHHHHHHHhccC--CCccceeeeEeecCCCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lv 438 (521)
++||+|+||+||+|+.. +|+.||||++....... ......++.+|+.++++++ |||||++++++.+.+ ..++|
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~--~~~lv 87 (273)
T d1xwsa_ 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SFVLI 87 (273)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC--eEEEE
Confidence 78999999999999986 78999999985433111 1111234678999999986 999999999999887 89999
Q ss_pred EeeCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeeeCCCchhhhcc
Q 009972 439 FDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-~~~~kl~DfGla~~~~ 516 (521)
|||+.+ +++.+++.... .+++.++..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+|+...
T Consensus 88 ~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~ 162 (273)
T d1xwsa_ 88 LERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK 162 (273)
T ss_dssp EECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECccccceecc
Confidence 999976 68888876433 489999999999999999999999 9999999999999985 4799999999998765
Q ss_pred cc
Q 009972 517 SS 518 (521)
Q Consensus 517 ~~ 518 (521)
..
T Consensus 163 ~~ 164 (273)
T d1xwsa_ 163 DT 164 (273)
T ss_dssp SS
T ss_pred cc
Confidence 43
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.5e-27 Score=232.18 Aligned_cols=145 Identities=14% Similarity=0.160 Sum_probs=129.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||||++.... .......++.+|+.++++++|||||++++++.+.. ..++|+||+
T Consensus 8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~--~~~iv~~~~ 83 (292)
T d1unla_ 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEFC 83 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSC--SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCcCeEEEEEEECCCCcEEEEEEEehhh--CChHHHHHHHHHHHHHHhcCcCCEEeecccccccc--ceeEEeeec
Confidence 78999999999999986 78899999985432 22345678999999999999999999999999887 889999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
.++++..+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.|+....
T Consensus 84 ~~~~l~~~~~~~~--~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~ 153 (292)
T d1unla_ 84 DQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp SEEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ccccccccccccc--ccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccC
Confidence 9999988876443 588999999999999999999999 999999999999999999999999999987654
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.1e-27 Score=236.54 Aligned_cols=145 Identities=20% Similarity=0.218 Sum_probs=120.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC--CceEEEEe
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFD 440 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e 440 (521)
+.||+|+||+||+|+.. +|+.||||++.... .....+.+.+|+.+|++++||||+++++++..+.. ...++++|
T Consensus 14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~ 90 (345)
T d1pmea_ 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVT 90 (345)
T ss_dssp EECC---CCCEEEEEETTTCSEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEE
T ss_pred EEEeeccCeEEEEEEECCCCcEEEEEEEehhc---ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEE
Confidence 78999999999999985 79999999985322 12345678999999999999999999999975431 12355667
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|+.+|+|.+++... .+++..+..++.|+++||+|||+. +||||||||+|||+++++.+||+|||+|+....
T Consensus 91 ~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~ 161 (345)
T d1pmea_ 91 HLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161 (345)
T ss_dssp ECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred eecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence 77899999999643 489999999999999999999999 999999999999999999999999999987643
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.2e-27 Score=238.94 Aligned_cols=143 Identities=19% Similarity=0.257 Sum_probs=117.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecC----CCCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES----SPFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~----~~~~~~lv 438 (521)
++||+|+||+||+|+.. +|+.||||++...... +.+|++++++++|||||++++++... +....++|
T Consensus 26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--------~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 97 (350)
T d1q5ka_ 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--------KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97 (350)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS--------CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred eEEeeCcCeEEEEEEECCCCCEEEEEEECccchH--------HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence 68999999999999996 6899999998543222 34799999999999999999998542 22257899
Q ss_pred EeeCCCCChhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeeeCCCchhhhcc
Q 009972 439 FDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-~~kl~DfGla~~~~ 516 (521)
|||+++|.+..+.+. .....+++.++..|+.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+|+.+.
T Consensus 98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~ 174 (350)
T d1q5ka_ 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174 (350)
T ss_dssp EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEECC
T ss_pred EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhcc
Confidence 999987644443321 2334699999999999999999999998 999999999999999775 89999999998764
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 175 ~ 175 (350)
T d1q5ka_ 175 R 175 (350)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.94 E-value=3e-27 Score=233.94 Aligned_cols=143 Identities=15% Similarity=0.179 Sum_probs=123.2
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecCCCCce
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~ 435 (521)
++|. +.||+|+||+||+|+.. +|+.||||++... ..+++.+|+.+|.+++ ||||+++++++........
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~ 107 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 107 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence 3454 78999999999999985 7889999998422 1356889999999995 9999999999976543468
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeeeCCCchhhh
Q 009972 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFL 514 (521)
Q Consensus 436 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~-~~kl~DfGla~~ 514 (521)
++||||+++|+|..+.+ .+++.++..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+|+.
T Consensus 108 ~~v~e~~~~~~L~~~~~-----~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~ 179 (328)
T d3bqca1 108 ALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179 (328)
T ss_dssp EEEEECCCSCBGGGTTT-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEE
T ss_pred eEEEeecCCCcHHHHhc-----CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeeccccccee
Confidence 99999999999987652 489999999999999999999999 999999999999998655 699999999987
Q ss_pred ccc
Q 009972 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
+.+
T Consensus 180 ~~~ 182 (328)
T d3bqca1 180 YHP 182 (328)
T ss_dssp CCT
T ss_pred ccC
Confidence 654
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=9.5e-28 Score=236.35 Aligned_cols=151 Identities=19% Similarity=0.151 Sum_probs=128.7
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC-CccceeeeEeecCCC
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSP 432 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~ 432 (521)
++|. +.||+|+||+||+|+.. +|+.||||.+..+.........+.+.+|++++++++| |||+++++++.+..
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~- 102 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET- 102 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT-
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC-
Confidence 4454 89999999999999862 4789999998554322222234568899999999977 89999999998877
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchh
Q 009972 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla 512 (521)
..+++|||+++|+|.+++.... .++......++.|++.||+|+|+. +|+||||||+|||+|.++.+||+|||+|
T Consensus 103 -~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a 176 (322)
T d1vzoa_ 103 -KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 176 (322)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred -ceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccch
Confidence 8999999999999999997544 367888999999999999999999 9999999999999999999999999999
Q ss_pred hhccc
Q 009972 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+.+..
T Consensus 177 ~~~~~ 181 (322)
T d1vzoa_ 177 KEFVA 181 (322)
T ss_dssp EECCG
T ss_pred hhhcc
Confidence 87643
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.2e-26 Score=231.37 Aligned_cols=145 Identities=20% Similarity=0.212 Sum_probs=118.7
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCC----CceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||+||+|+.. +|+.||||++.... ......+.+.+|+++|++++|||||+++++|...+. ...++|
T Consensus 24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 101 (346)
T d1cm8a_ 24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 101 (346)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEchhh--cChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEE
Confidence 68999999999999986 68999999985322 233445678999999999999999999999976531 246999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+ +++|..+.+.. .+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+|++|||+|+....
T Consensus 102 ~e~~-~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 102 MPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 173 (346)
T ss_dssp EECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred Eecc-cccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceeccCC
Confidence 9999 45787777532 489999999999999999999999 999999999999999999999999999997664
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.1e-26 Score=228.84 Aligned_cols=146 Identities=20% Similarity=0.289 Sum_probs=120.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC------CCceE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PFTRM 436 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~~~ 436 (521)
+.||+|+||+||+|+.. +|+.||||++..... ......++.+|+.++++++||||+++++++.... ....+
T Consensus 16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~ 93 (318)
T d3blha1 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 93 (318)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC----C--TTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEE
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEE
Confidence 78999999999999985 789999999854432 2234567899999999999999999999986532 12579
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009972 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~ 516 (521)
+||||++++.+..+.. ....++...+..|+.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 94 iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~ 168 (318)
T d3blha1 94 LVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 168 (318)
T ss_dssp EEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceeeecc
Confidence 9999999877665543 233588999999999999999999999 99999999999999999999999999998654
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3e-26 Score=228.56 Aligned_cols=146 Identities=21% Similarity=0.202 Sum_probs=121.2
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC---CCceEEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|+||+||+|+.. +|+.||||++..... .....+++.+|+.++++++|||+|++++++.... ....++++
T Consensus 24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~ 101 (348)
T d2gfsa1 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101 (348)
T ss_dssp EECGGGTTSSEEEEEETTTTEEEEEEECSCTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECchhc--ChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEE
Confidence 78999999999999985 789999999854322 2334567899999999999999999999986432 11356778
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
||+.+|+|.++++.+ .+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+|++|||+|.....
T Consensus 102 ~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~ 173 (348)
T d2gfsa1 102 THLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173 (348)
T ss_dssp EECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred EeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccCc
Confidence 888999999999633 499999999999999999999999 999999999999999999999999999987654
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3.3e-26 Score=223.98 Aligned_cols=151 Identities=20% Similarity=0.243 Sum_probs=120.5
Q ss_pred hhhh--hhhCcCCCeeEEEEEeC-C-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCccceeeeEeecC--
Q 009972 360 EDFS--NIIGSSPDSLVYKGTMK-G-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRES-- 430 (521)
Q Consensus 360 ~~f~--~~lg~G~~g~Vy~~~~~-~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~-- 430 (521)
++|. +.||+|+||+||+|+.. + ++.||||++...... ......+.+|+.+++.+ +||||++++++|...
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT--TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc--chHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 3454 78999999999999984 4 567999998654322 11223466787777665 799999999998532
Q ss_pred -CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCC
Q 009972 431 -SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 431 -~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~Df 509 (521)
.....+++|||+++|.+..... .....+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~df 160 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 160 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred ccCceEEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecch
Confidence 1226899999999877665443 3334689999999999999999999999 9999999999999999999999999
Q ss_pred chhhhcc
Q 009972 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++...
T Consensus 161 g~~~~~~ 167 (305)
T d1blxa_ 161 GLARIYS 167 (305)
T ss_dssp CSCCCCC
T ss_pred hhhhhhc
Confidence 9998654
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.92 E-value=2.5e-25 Score=216.19 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=120.9
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC-CccceeeeEeecCCCCceEEEEee
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +|+.||||.+..... ...+.+|++.+..++| +|++.+++++.... ..++||||
T Consensus 11 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~~vme~ 82 (293)
T d1csna_ 11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLVIDL 82 (293)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEEEEC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEccccC------cHHHHHHHHHHHHhcCCCCCCEEEEEeecCC--ccEEEEEe
Confidence 78999999999999986 688999998744322 1246788899999865 89999999998877 88999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-----CCCeeeCCCchhhhcc
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~-----~~~~kl~DfGla~~~~ 516 (521)
+ +|+|.++++... ..+++.++..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+|+.+.
T Consensus 83 ~-~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~ 157 (293)
T d1csna_ 83 L-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 157 (293)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred c-CCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence 9 579999987443 3589999999999999999999999 9999999999999974 5789999999999865
Q ss_pred c
Q 009972 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 158 ~ 158 (293)
T d1csna_ 158 D 158 (293)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=4e-25 Score=220.76 Aligned_cols=144 Identities=17% Similarity=0.168 Sum_probs=116.3
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCC----CCceEEE
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
++||+|+||+||+|++. +|+.||||++..... .....+++.+|+.++++++|||||++++++.... ....|+|
T Consensus 23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv 100 (355)
T d2b1pa1 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 100 (355)
T ss_dssp EECSCC--CEEEEEEETTTTEEEEEEEEESTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEChhhc--CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEE
Confidence 68999999999999986 689999999854332 2334567899999999999999999999996432 2378999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009972 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~~~~ 517 (521)
|||+.++.+ +.+. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|++|||+++....
T Consensus 101 ~Ey~~~~l~-~~~~----~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~ 171 (355)
T d2b1pa1 101 MELMDANLC-QVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_dssp EECCSEEHH-HHHT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EeccchHHH-Hhhh----cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhcccc
Confidence 999977544 4443 2489999999999999999999999 999999999999999999999999999886543
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.91 E-value=5.8e-25 Score=214.40 Aligned_cols=142 Identities=14% Similarity=0.214 Sum_probs=115.8
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccceeeeEeecCCCCceEEEEeeC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||.+..+.. .+++.+|+++++.++|+|+|..+++|...+. ..++||||+
T Consensus 13 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~-~~~ivme~~ 85 (299)
T d1ckia_ 13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVMELL 85 (299)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEESCTT------SCCHHHHHHHHHHSTTSTTCCCEEEEEEETT-EEEEEEECC
T ss_pred EEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc------CHHHHHHHHHHHHccCCCcccEEEEEEecCC-EEEEEEEEc
Confidence 78999999999999985 688999998754322 1247889999999988887777666544332 789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeeeCCCchhhhccc
Q 009972 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld---~~~~~kl~DfGla~~~~~ 517 (521)
.+ ++.+.+.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++ .+..+||+|||+|+.+.+
T Consensus 86 ~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 86 GP-SLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp CC-BHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred CC-chhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 55 6666654332 3589999999999999999999999 999999999999975 456799999999998754
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.87 E-value=1.9e-22 Score=183.05 Aligned_cols=135 Identities=13% Similarity=0.102 Sum_probs=105.8
Q ss_pred hhhhCcCCCeeEEEEEeCCCCEEEEEEeeeecc--------------ccchhhHHHHHHHHHHHhccCCCccceeeeEee
Q 009972 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEE--------------HWTGYLELYFQREVADLARINHENTGKLLGYCR 428 (521)
Q Consensus 363 ~~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 428 (521)
.+.||+|+||+||+|+..+|+.||||.+..... .........+.+|...+.++.|.+++..+++.
T Consensus 5 g~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~- 83 (191)
T d1zara2 5 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE- 83 (191)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE-
T ss_pred CCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec-
Confidence 478999999999999999999999998642210 00111234567789999999999999887653
Q ss_pred cCCCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeeeCC
Q 009972 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dlk~~NILld~~~~~kl~D 508 (521)
..+++|||++++.+.+ +++....+++.|+++|++|||+. +|+||||||+|||+++++ ++|+|
T Consensus 84 -----~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~~-~~liD 145 (191)
T d1zara2 84 -----GNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEEG-IWIID 145 (191)
T ss_dssp -----TTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETTE-EEECC
T ss_pred -----CCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCCC-EEEEE
Confidence 2479999999865543 23344567999999999999999 999999999999999754 89999
Q ss_pred Cchhhhcc
Q 009972 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||+|+...
T Consensus 146 FG~a~~~~ 153 (191)
T d1zara2 146 FPQSVEVG 153 (191)
T ss_dssp CTTCEETT
T ss_pred CCCcccCC
Confidence 99997664
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=5.2e-21 Score=191.21 Aligned_cols=146 Identities=16% Similarity=0.111 Sum_probs=114.5
Q ss_pred hhhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-----------CCccceeeeEeecCC
Q 009972 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----------HENTGKLLGYCRESS 431 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~~~~ 431 (521)
++||+|+||+||+|+.. +|+.||||++.... ...+.+.+|+.++++++ |+|||++++++....
T Consensus 19 ~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~ 93 (362)
T d1q8ya_ 19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG 93 (362)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecc
Confidence 78999999999999985 78999999984321 22356788998888775 578999999886544
Q ss_pred CCceEEEEeeCCCCCh-hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCC------C
Q 009972 432 PFTRMLVFDYASNGTL-YEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDF------S 503 (521)
Q Consensus 432 ~~~~~lv~ey~~~g~L-~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~------~ 503 (521)
....+++++++..+.. ...........+++..+..++.||+.||+|||+ . +|+||||||+|||++.++ .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~~~~~~ 170 (362)
T d1q8ya_ 94 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQ 170 (362)
T ss_dssp TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTTTEEE
T ss_pred ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCcccccce
Confidence 3367777777765433 333333444568999999999999999999998 5 899999999999998655 3
Q ss_pred eeeCCCchhhhccc
Q 009972 504 PKVSPLCLSFLLVS 517 (521)
Q Consensus 504 ~kl~DfGla~~~~~ 517 (521)
+|++|||.|+....
T Consensus 171 ~kl~dfg~s~~~~~ 184 (362)
T d1q8ya_ 171 IKIADLGNACWYDE 184 (362)
T ss_dssp EEECCCTTCEETTB
T ss_pred eeEeeccccccccc
Confidence 99999999986543
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.82 E-value=5.1e-21 Score=187.30 Aligned_cols=174 Identities=30% Similarity=0.550 Sum_probs=149.3
Q ss_pred CCEEEEEecC-CCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 70 DRVLKINISG-SSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~-n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|+|++ |+++|.+|++|++|++|++|+|++|++.+..|..+..+.+|++++++.|.+.+.+|..+++++.|+.++
T Consensus 76 ~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~ 155 (313)
T d1ogqa_ 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceee
Confidence 4789999997 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchhhhCCCCC-CEEeCCCCcCCccCCCCC-------------------------CC--------------
Q 009972 149 LQSNGLTGRLPAELGNLISL-EELHLDRNRLQGAVPAGS-------------------------NS-------------- 188 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L-~~L~Ls~N~l~g~~p~~~-------------------------~~-------------- 188 (521)
+++|.++|.+|..+..+.++ +.++++.|+++|..|... ..
T Consensus 156 l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 235 (313)
T d1ogqa_ 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999988888776 778888888776554210 00
Q ss_pred -----cccccccccccccCCCCC-----cccCCCCCEEeccCCccccCCccc--cccCCCcccCCCc
Q 009972 189 -----GYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKC--LEYLPSTSFQGNC 243 (521)
Q Consensus 189 -----~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~--l~~l~~l~~~~N~ 243 (521)
.....+..+++++|++++ +..+++|++|||++|+|+|.+|.. +.+|+.+++.+|+
T Consensus 236 ~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred cccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCc
Confidence 112356778999999874 567899999999999999999964 5678888899993
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=8.7e-20 Score=174.21 Aligned_cols=174 Identities=28% Similarity=0.293 Sum_probs=149.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..++.|+|++|.|++..+..|..+++|++|+|++|+|+. +| .++.+++|++|+|++|+++ .+|..+.++++|+.|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l 107 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccccccccccccc-ccccccccccccccccc
Confidence 479999999999999777889999999999999999984 44 3678999999999999998 56788999999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccCCccc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~ 224 (521)
++|.+.+..+..+..+.+|++|++++|.++ .+|..... ....+..+++++|+++++ ..+++|++|||++|+|+
T Consensus 108 ~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~-~l~~~~~~-~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~ 185 (266)
T d1p9ag_ 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLT-PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (266)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCC-CCCTTTTT-TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cccccceeeccccccccccccccccccccc-eecccccc-ccccchhcccccccccccCccccccccccceeecccCCCc
Confidence 999999888888899999999999999998 45543332 135678889999998764 55899999999999999
Q ss_pred cCCcccc---ccCCCcccCCCccCCCCC
Q 009972 225 GSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 225 g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
.+|..+ .+++.+++++|+|.+.|.
T Consensus 186 -~lp~~~~~~~~L~~L~L~~Np~~CdC~ 212 (266)
T d1p9ag_ 186 -TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (266)
T ss_dssp -CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred -ccChhHCCCCCCCEEEecCCCCCCCcc
Confidence 888765 456778899999988764
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.78 E-value=9.3e-20 Score=165.14 Aligned_cols=101 Identities=27% Similarity=0.331 Sum_probs=54.6
Q ss_pred EecCCCCcccCCccccCCCCCCEEEcCCCcccccC-CcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccC
Q 009972 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGL 154 (521)
Q Consensus 76 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 154 (521)
+.++++|+. +|+.+. +++++|+|++|+|++.+ +..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++
T Consensus 14 ~Cs~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l 90 (192)
T d1w8aa_ 14 DCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI 90 (192)
T ss_dssp ECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCC
T ss_pred EEeCCCcCc-cCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccc
Confidence 334444443 344332 45555555555555422 33445555555555555555555555555555555555555555
Q ss_pred CCCCchhhhCCCCCCEEeCCCCcCC
Q 009972 155 TGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 155 ~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
++..|..|.++++|++|+|++|+|+
T Consensus 91 ~~l~~~~F~~l~~L~~L~L~~N~l~ 115 (192)
T d1w8aa_ 91 KEISNKMFLGLHQLKTLNLYDNQIS 115 (192)
T ss_dssp CEECSSSSTTCTTCCEEECCSSCCC
T ss_pred cccCHHHHhCCCcccccccCCcccc
Confidence 5544555555555555555555555
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=2e-18 Score=166.26 Aligned_cols=177 Identities=20% Similarity=0.171 Sum_probs=108.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCc-------------------------ccCCCCCCcEEE
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK-------------------------ELGLLKRLKILD 124 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-------------------------~~~~l~~L~~L~ 124 (521)
..++.|+|++|.|++..+..|.++++|++|++++|++.+..+. .|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 4678999999999987777899999999999999988654443 445555666666
Q ss_pred ccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCC
Q 009972 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (521)
Q Consensus 125 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l 204 (521)
+++|.+....+..+..+++|+.+++++|++++..+..|..+++|+.|++++|++++..|. .+.. ...+..++++.|++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~-~f~~-l~~L~~l~l~~N~l 189 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER-AFRG-LHSLDRLLLHQNRV 189 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT-TTTT-CTTCCEEECCSSCC
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchh-hhcc-ccccchhhhhhccc
Confidence 666665544455555556666666666666644445555566666666666666533222 2111 23455555666655
Q ss_pred CC-----cccCCCCCEEeccCCccccCCccccc---cCCCcccCCCccCCCC
Q 009972 205 TG-----LCHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKD 248 (521)
Q Consensus 205 ~~-----~~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~~~ 248 (521)
++ +..+++|++||+++|++.+..|..+. ++..+++++|++.+.|
T Consensus 190 ~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C 241 (284)
T d1ozna_ 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (284)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred cccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCc
Confidence 43 33455666666666666655554443 3445566666655544
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=1.3e-17 Score=158.90 Aligned_cols=169 Identities=25% Similarity=0.239 Sum_probs=139.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
...+++.++++|+. +|+.+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+ .+| .++.+++|+.|+|+
T Consensus 11 ~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 11 SHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLS 85 (266)
T ss_dssp TCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECC
T ss_pred CCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-cccccccccccccc
Confidence 45567999999986 677664 68999999999999877788999999999999999998 555 46789999999999
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccCCcccc
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~g 225 (521)
+|+++ .+|..+.++++|++|++++|.+.+..+... . ....+..++++.|.++.+ ..+++|+.+++++|++++
T Consensus 86 ~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~-~-~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~ 162 (266)
T d1p9ag_ 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGAL-R-GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (266)
T ss_dssp SSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTT-T-TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred ccccc-ccccccccccccccccccccccceeecccc-c-cccccccccccccccceeccccccccccchhcccccccccc
Confidence 99999 567789999999999999999984333322 2 235677889999988764 457899999999999997
Q ss_pred CCcccc---ccCCCcccCCCccCCC
Q 009972 226 SIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 226 ~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
..|..+ .+|+.|++++|.++..
T Consensus 163 ~~~~~~~~l~~L~~L~Ls~N~L~~l 187 (266)
T d1p9ag_ 163 LPAGLLNGLENLDTLLLQENSLYTI 187 (266)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred cCccccccccccceeecccCCCccc
Confidence 766554 5667889999988864
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.71 E-value=1.9e-17 Score=149.73 Aligned_cols=167 Identities=19% Similarity=0.236 Sum_probs=138.1
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCcccC-CccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccC
Q 009972 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFL-APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
|.|..|.|+.. ...++.|+|++|.|++.+ +..|..+++|++|+|++|++.+..+..|..+++|++|+|++
T Consensus 8 C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 67888999731 247899999999998755 56689999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc
Q 009972 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~ 207 (521)
|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+....+... +
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~--------------------~ 147 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW--------------------F 147 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH--------------------H
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHH--------------------H
Confidence 99998888889999999999999999998888889999999999999999874322100 0
Q ss_pred ccCCCCCEEeccCCccccCCccccccCCCcccCCCccCC
Q 009972 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~~l~~l~~~~N~l~~ 246 (521)
. ..++.+.+..|.++...|..+..++-+++..|.+.+
T Consensus 148 ~--~~l~~~~l~~~~~~c~~p~~l~~~~l~~L~~n~l~C 184 (192)
T d1w8aa_ 148 A--EWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKC 184 (192)
T ss_dssp H--HHHHHHCCSGGGCBBCSSTTTTTSBGGGSCTTTCCC
T ss_pred h--hhhhhhcccCCCeEeCCChhhcCCEeeecCHhhCcC
Confidence 0 113344566778888888888887778888886665
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.71 E-value=8e-17 Score=156.35 Aligned_cols=185 Identities=24% Similarity=0.380 Sum_probs=143.0
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCC
Q 009972 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 128 (521)
|.|++|.|+.. ...++.|+|++|+|+...+..|.++++|++|++++|.+....|..|.++++|++|++++|
T Consensus 10 c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 10 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred ecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 78999999741 356899999999999876678999999999999999999888999999999999999999
Q ss_pred CCCCCCCc------------------------------------------------ccCCCcCCceEecccccCCCCCch
Q 009972 129 QLTGPIPP------------------------------------------------EIGNLTGLVKINLQSNGLTGRLPA 160 (521)
Q Consensus 129 ~l~g~~p~------------------------------------------------~~~~l~~L~~L~Ls~N~l~g~~p~ 160 (521)
+++ .+|. .+..+++|+.+++++|.++ .+|.
T Consensus 90 ~l~-~l~~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~ 167 (305)
T d1xkua_ 90 QLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ 167 (305)
T ss_dssp CCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCS
T ss_pred ccC-cCccchhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-ccCc
Confidence 887 3442 1334556777778887777 4554
Q ss_pred hhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccCCccccCCcccc---c
Q 009972 161 ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCL---E 232 (521)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~g~ip~~l---~ 232 (521)
.+ +++|+.|++++|..++..+..... ...+..+++++|.++++ ..+++|++|+|++|+|+ .+|..+ .
T Consensus 168 ~~--~~~L~~L~l~~n~~~~~~~~~~~~--~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~ 242 (305)
T d1xkua_ 168 GL--PPSLTELHLDGNKITKVDAASLKG--LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK 242 (305)
T ss_dssp SC--CTTCSEEECTTSCCCEECTGGGTT--CTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCS
T ss_pred cc--CCccCEEECCCCcCCCCChhHhhc--cccccccccccccccccccccccccccceeeeccccccc-cccccccccc
Confidence 43 578899999999888766543222 24566778888887653 55788999999999998 677665 4
Q ss_pred cCCCcccCCCccCCCCC
Q 009972 233 YLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 233 ~l~~l~~~~N~l~~~~~ 249 (521)
+|+.+++++|+++....
T Consensus 243 ~L~~L~Ls~N~i~~i~~ 259 (305)
T d1xkua_ 243 YIQVVYLHNNNISAIGS 259 (305)
T ss_dssp SCCEEECCSSCCCCCCT
T ss_pred CCCEEECCCCccCccCh
Confidence 56677888998887643
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.64 E-value=1.1e-15 Score=138.68 Aligned_cols=154 Identities=28% Similarity=0.370 Sum_probs=120.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|+++.. +.+..+++|++|+|++|++++..| +.++++|++|++++|.+. .+| .+.+++.|+.|++
T Consensus 40 ~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l 113 (199)
T d2omxa2 40 DQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTL 113 (199)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEEC
T ss_pred cCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCccc--ccCCcccccccccccccc-ccc-ccccccccccccc
Confidence 4688999999999863 358899999999999999986543 899999999999999987 455 4889999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---cccCCCCCEEeccCCccccC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ 226 (521)
++|.+.. + ..+..+++|+.|++++|++. .+|... ....+..+++.+|.++. +..+++|+.|++++|+++.
T Consensus 114 ~~~~~~~-~-~~~~~l~~L~~L~l~~n~l~-~~~~l~---~~~~L~~L~l~~n~l~~l~~l~~l~~L~~L~ls~N~i~~- 186 (199)
T d2omxa2 114 FNNQITD-I-DPLKNLTNLNRLELSSNTIS-DISALS---GLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSD- 186 (199)
T ss_dssp CSSCCCC-C-GGGTTCTTCSEEECCSSCCC-CCGGGT---TCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-
T ss_pred ccccccc-c-cccchhhhhHHhhhhhhhhc-cccccc---ccccccccccccccccCCccccCCCCCCEEECCCCCCCC-
Confidence 9999884 3 34888999999999999987 344311 12466777888887765 4567888888888888874
Q ss_pred CccccccCCCc
Q 009972 227 IPKCLEYLPST 237 (521)
Q Consensus 227 ip~~l~~l~~l 237 (521)
+| .+..++.|
T Consensus 187 i~-~l~~L~~L 196 (199)
T d2omxa2 187 IS-VLAKLTNL 196 (199)
T ss_dssp CG-GGGGCTTC
T ss_pred Cc-cccCCCCC
Confidence 44 34444443
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=1.2e-16 Score=153.48 Aligned_cols=156 Identities=21% Similarity=0.242 Sum_probs=133.0
Q ss_pred CEEEEEe-cCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 71 RVLKINI-SGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 71 ~l~~L~L-~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+..++. ..+.++...+..|.++++|++|++++|.+....+..+..+++|+.+++++|+|++..+..|..+++|+.|+|
T Consensus 81 ~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l 160 (284)
T d1ozna_ 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (284)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cccccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhccc
Confidence 4566655 466777777888999999999999999998777888899999999999999999777788999999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc-----ccCCCCCEEeccCCccc
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~ 224 (521)
++|++++..|..|.++++|+++++++|++++..|..+.. ..++..++++.|.+.++ ..+++|++|++++|.+.
T Consensus 161 ~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~--l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRD--LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT--CTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccCcccccchhhhccccccchhhhhhccccccChhHhhh--hhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 999999888889999999999999999999777765432 35788899999998864 56889999999999998
Q ss_pred cCCc
Q 009972 225 GSIP 228 (521)
Q Consensus 225 g~ip 228 (521)
+.-+
T Consensus 239 C~C~ 242 (284)
T d1ozna_ 239 CDCR 242 (284)
T ss_dssp CSGG
T ss_pred CCcc
Confidence 6543
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.59 E-value=5.1e-15 Score=135.40 Aligned_cols=151 Identities=23% Similarity=0.336 Sum_probs=117.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.|++++|.++... .+..+++|++|+|++|+|++. + .+..+++|++|++++|+++ .+| .+.++++|+.|+++
T Consensus 47 ~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 47 SIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLSLE 120 (210)
T ss_dssp TCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEECT
T ss_pred CccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCc-c-ccccCcccccccccccccc-ccc-cccccccccccccc
Confidence 6888999999998743 488899999999999999864 3 3788999999999999998 455 58889999999999
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCccccCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~i 227 (521)
+|.+. .+ ..+..+++|+.+++++|.+++..+.. ...++..+++++|.++++ ..+++|+.|++++|+++ .+
T Consensus 121 ~~~~~-~~-~~l~~l~~l~~l~~~~n~l~~~~~~~----~l~~L~~l~l~~n~l~~i~~l~~l~~L~~L~Ls~N~i~-~l 193 (210)
T d1h6ta2 121 HNGIS-DI-NGLVHLPQLESLYLGNNKITDITVLS----RLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS-DL 193 (210)
T ss_dssp TSCCC-CC-GGGGGCTTCCEEECCSSCCCCCGGGG----GCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC-BC
T ss_pred ccccc-cc-cccccccccccccccccccccccccc----ccccccccccccccccccccccCCCCCCEEECCCCCCC-CC
Confidence 99987 34 46888999999999999987432211 124677778888877654 45778888888888887 45
Q ss_pred ccccccCC
Q 009972 228 PKCLEYLP 235 (521)
Q Consensus 228 p~~l~~l~ 235 (521)
| .+..++
T Consensus 194 ~-~l~~l~ 200 (210)
T d1h6ta2 194 R-ALAGLK 200 (210)
T ss_dssp G-GGTTCT
T ss_pred h-hhcCCC
Confidence 5 344443
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.56 E-value=5.6e-15 Score=122.94 Aligned_cols=102 Identities=26% Similarity=0.298 Sum_probs=90.2
Q ss_pred EEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEeccccc
Q 009972 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (521)
Q Consensus 74 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (521)
.|+|++|+++. ++ .+..+++|++|++++|+|+ .+|..++.+++|++|++++|+|+ .+| .+..+++|+.|++++|+
T Consensus 2 ~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCc
Confidence 68999999985 44 5899999999999999998 57888999999999999999999 455 59999999999999999
Q ss_pred CCCCC-chhhhCCCCCCEEeCCCCcCCc
Q 009972 154 LTGRL-PAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 154 l~g~~-p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
++... +..+..+++|++|++++|+++.
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 98533 2578999999999999999983
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.55 E-value=9.7e-15 Score=121.48 Aligned_cols=104 Identities=29% Similarity=0.357 Sum_probs=89.2
Q ss_pred CEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCC
Q 009972 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
|.|+|++|+++ .+| .+..+++|++||+++|+|+ .+|+.++.+++|+.|++++|+++ .+| .++++++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence 58999999998 455 4899999999999999998 68889999999999999999999 465 5999999999999999
Q ss_pred cCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCcccc
Q 009972 177 RLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 177 ~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g 225 (521)
+++ .+|.. ..+..+++|+.+++++|+++.
T Consensus 76 ~i~-~~~~~-------------------~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQ-QSAAI-------------------QPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCC-SSSTT-------------------GGGGGCTTCCEEECTTSGGGG
T ss_pred ccC-CCCCc-------------------hhhcCCCCCCEEECCCCcCCc
Confidence 998 34321 124567889999999999973
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=9.1e-15 Score=127.73 Aligned_cols=113 Identities=20% Similarity=0.145 Sum_probs=67.8
Q ss_pred cccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCC
Q 009972 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168 (521)
Q Consensus 89 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 168 (521)
.+.++..|++|+|++|+|+. +|..+..+++|+.|||++|+|+ .++ .|..+++|++|+|++|+++...+..+..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence 35556666677777776663 4555556666777777777666 343 46666677777777777664444445566677
Q ss_pred CEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccc
Q 009972 169 EELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 169 ~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~ 224 (521)
+.|++++|+++ .++. +..+..+++|+.|++++|.++
T Consensus 90 ~~L~L~~N~i~-~~~~-------------------l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 90 TELILTNNSLV-ELGD-------------------LDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CEEECCSCCCC-CGGG-------------------GGGGGGCTTCCEEECCSSGGG
T ss_pred ccceecccccc-cccc-------------------ccccccccccchhhcCCCccc
Confidence 77777777665 2211 012344566666666666665
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.51 E-value=4.2e-14 Score=127.98 Aligned_cols=161 Identities=24% Similarity=0.304 Sum_probs=126.3
Q ss_pred EEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccC
Q 009972 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGL 154 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 154 (521)
+.++.+.+++.++ ...+.+|++|++++|.+.. ++ .+..+++|++|+|++|++++. ++ ++++++|++|++++|.+
T Consensus 23 ~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~-~~-l~~l~~L~~L~l~~n~~ 96 (199)
T d2omxa2 23 TVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQI 96 (199)
T ss_dssp HHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCC
T ss_pred HHhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCc-cc-ccCCccccccccccccc
Confidence 3455566665433 3567899999999999984 43 588999999999999999964 43 89999999999999999
Q ss_pred CCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---cccCCCCCEEeccCCccccCCc-cc
Q 009972 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIP-KC 230 (521)
Q Consensus 155 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ip-~~ 230 (521)
. .+| .+.++++|+.|++++|.+....+-.. ...+..+++++|.+.. +..+++|+.|++++|++++..| ..
T Consensus 97 ~-~~~-~l~~l~~L~~L~l~~~~~~~~~~~~~----l~~L~~L~l~~n~l~~~~~l~~~~~L~~L~l~~n~l~~l~~l~~ 170 (199)
T d2omxa2 97 A-DIT-PLANLTNLTGLTLFNNQITDIDPLKN----LTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLAN 170 (199)
T ss_dssp C-CCG-GGTTCTTCSEEECCSSCCCCCGGGTT----CTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTT
T ss_pred c-ccc-ccccccccccccccccccccccccch----hhhhHHhhhhhhhhcccccccccccccccccccccccCCccccC
Confidence 8 455 48999999999999999875332211 2467888999998875 4567899999999999985433 34
Q ss_pred cccCCCcccCCCccCCC
Q 009972 231 LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 231 l~~l~~l~~~~N~l~~~ 247 (521)
+.+|+.+++++|+++..
T Consensus 171 l~~L~~L~ls~N~i~~i 187 (199)
T d2omxa2 171 LTTLERLDISSNKVSDI 187 (199)
T ss_dssp CTTCCEEECCSSCCCCC
T ss_pred CCCCCEEECCCCCCCCC
Confidence 57788899999987764
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.51 E-value=4.4e-14 Score=140.75 Aligned_cols=164 Identities=25% Similarity=0.335 Sum_probs=90.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
++..+++++|.+++..| +...++|++|++++|+++. + +.+..+++|+.|++++|.+++.. .++.+++|+.|+++
T Consensus 198 ~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~ 271 (384)
T d2omza2 198 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLG 271 (384)
T ss_dssp TCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECC
T ss_pred ccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCC--cccccccCCEeecc
Confidence 45566666666666433 3555666666666666653 2 24566666666666666666432 25566666666666
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCc---ccCCCCCEEeccCCccccCC
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~i 227 (521)
+|++++. + .+..++.++.++++.|.+++. +. ......+..+++++|+++++ ..+++|+.|++++|++++ +
T Consensus 272 ~~~l~~~-~-~~~~~~~l~~l~~~~n~l~~~-~~---~~~~~~l~~L~ls~n~l~~l~~l~~l~~L~~L~L~~n~l~~-l 344 (384)
T d2omza2 272 ANQISNI-S-PLAGLTALTNLELNENQLEDI-SP---ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSD-V 344 (384)
T ss_dssp SSCCCCC-G-GGTTCTTCSEEECCSSCCSCC-GG---GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCC-C
T ss_pred CcccCCC-C-ccccccccccccccccccccc-cc---cchhcccCeEECCCCCCCCCcccccCCCCCEEECCCCCCCC-C
Confidence 6666632 2 255566666666666666532 11 01113445555666655542 345566666666666652 3
Q ss_pred c--cccccCCCcccCCCccCCC
Q 009972 228 P--KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 228 p--~~l~~l~~l~~~~N~l~~~ 247 (521)
| ..+.+|+.+++++|++++.
T Consensus 345 ~~l~~l~~L~~L~l~~N~l~~l 366 (384)
T d2omza2 345 SSLANLTNINWLSAGHNQISDL 366 (384)
T ss_dssp GGGGGCTTCCEEECCSSCCCBC
T ss_pred hhHcCCCCCCEEECCCCcCCCC
Confidence 3 1123444556666655543
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=8.5e-15 Score=127.94 Aligned_cols=106 Identities=23% Similarity=0.234 Sum_probs=92.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|+|+. ++..+..+++|+.|+|++|+|+. ++ .|..+++|++|++++|+++...+..+..+++|+.|+|
T Consensus 18 ~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 18 VRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 94 (162)
T ss_dssp TSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccccccccccccee
Confidence 468999999999987 46667889999999999999995 44 5899999999999999999554555678999999999
Q ss_pred ccccCCCCCc--hhhhCCCCCCEEeCCCCcCC
Q 009972 150 QSNGLTGRLP--AELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 150 s~N~l~g~~p--~~~~~l~~L~~L~Ls~N~l~ 179 (521)
++|+++. ++ ..+..+++|++|++++|.++
T Consensus 95 ~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 95 TNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ccccccc-cccccccccccccchhhcCCCccc
Confidence 9999984 44 46889999999999999997
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.50 E-value=3.6e-14 Score=129.63 Aligned_cols=160 Identities=21% Similarity=0.317 Sum_probs=124.2
Q ss_pred EecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCC
Q 009972 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155 (521)
Q Consensus 76 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 155 (521)
++..+.+++.++. ..+.+|++|++++|.++.. + .+..+++|++|+|++|++++ ++ .++.+++|++|++++|+++
T Consensus 30 ~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~ 103 (210)
T d1h6ta2 30 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK 103 (210)
T ss_dssp HTTCSCTTSEECH--HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC
T ss_pred HhCcCccCCccCH--HHhcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc
Confidence 4555566555443 3567899999999999853 3 48889999999999999995 44 4789999999999999999
Q ss_pred CCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---cccCCCCCEEeccCCccccCCc-ccc
Q 009972 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIP-KCL 231 (521)
Q Consensus 156 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ip-~~l 231 (521)
+ +| .+.++++|+.|++++|.+. .++... ....+..++++.|.++. +..+++|+.+++++|++++..| ..+
T Consensus 104 ~-l~-~l~~l~~L~~L~l~~~~~~-~~~~l~---~l~~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n~l~~i~~l~~l 177 (210)
T d1h6ta2 104 D-LS-SLKDLKKLKSLSLEHNGIS-DINGLV---HLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGL 177 (210)
T ss_dssp C-GG-GGTTCTTCCEEECTTSCCC-CCGGGG---GCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGTTC
T ss_pred c-cc-ccccccccccccccccccc-cccccc---ccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 4 65 5899999999999999987 343211 12456778888888775 4568899999999999985433 345
Q ss_pred ccCCCcccCCCccCCC
Q 009972 232 EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 232 ~~l~~l~~~~N~l~~~ 247 (521)
.+++.+++++|+++..
T Consensus 178 ~~L~~L~Ls~N~i~~l 193 (210)
T d1h6ta2 178 TKLQNLYLSKNHISDL 193 (210)
T ss_dssp TTCCEEECCSSCCCBC
T ss_pred CCCCEEECCCCCCCCC
Confidence 6778899999987753
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.49 E-value=1.4e-13 Score=127.21 Aligned_cols=165 Identities=23% Similarity=0.333 Sum_probs=128.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++.+|+++.. +.+..+++|++|+|++|++++..| +..+++|++|++++|.++ .++ .+..+++|+.+++
T Consensus 41 ~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l 114 (227)
T d1h6ua2 41 DGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDL 114 (227)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEEC
T ss_pred CCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-ccccccccccccc
Confidence 3689999999999874 458999999999999999986544 889999999999999987 454 5788999999999
Q ss_pred ccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---cccCCCCCEEeccCCccccC
Q 009972 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ 226 (521)
++|...+. ..+...+.++.++++.+.+....+.. ...++..++++.|.+.. +..+++|+.||+++|++++
T Consensus 115 ~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~L~~L~l~~n~~~~~~~l~~l~~L~~L~Ls~n~l~~- 187 (227)
T d1h6ua2 115 TSTQITDV--TPLAGLSNLQVLYLDLNQITNISPLA----GLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD- 187 (227)
T ss_dssp TTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGGGG----GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-
T ss_pred cccccccc--chhccccchhhhhchhhhhchhhhhc----cccccccccccccccccchhhcccccceecccCCCccCC-
Confidence 99988753 33677888999999888887443321 12456777888887654 5678889999999999884
Q ss_pred Cc--cccccCCCcccCCCccCCC
Q 009972 227 IP--KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 227 ip--~~l~~l~~l~~~~N~l~~~ 247 (521)
+| ..+.+|+.+++++|+++..
T Consensus 188 l~~l~~l~~L~~L~Ls~N~lt~i 210 (227)
T d1h6ua2 188 ISPLASLPNLIEVHLKNNQISDV 210 (227)
T ss_dssp CGGGGGCTTCCEEECTTSCCCBC
T ss_pred ChhhcCCCCCCEEECcCCcCCCC
Confidence 44 3456777888999877764
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=7.5e-14 Score=130.15 Aligned_cols=188 Identities=12% Similarity=0.152 Sum_probs=114.5
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccC-CcccCCCCCCcEEEcc-
Q 009972 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILDLG- 126 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls- 126 (521)
|....|.|... ...+++|+|++|.|+...+..|.++++|++|+|++|.+...+ +..|..++++++|++.
T Consensus 8 C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp ECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 56667777521 236888999999988765667888899999999988887654 4467888888888875
Q ss_pred CCCCCCCCCcccCCCcCCceEecccccCCCCCch-hhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCC
Q 009972 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA-ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 127 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
.|++....+..|.++++|+.|++++|++....+. .+..+..|..+..+++.+. .++..........+..++++.|.++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~-~i~~~~~~~~~~~l~~L~l~~n~l~ 166 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQ 166 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cccccccccccccccccccccccchhhhcccccccccccccccccccccccccc-cccccccccccccceeeeccccccc
Confidence 4677767777788888888888888888743221 2233444444555555555 3333322222334444555555555
Q ss_pred Ccc----cCCCCCEE-eccCCccccCCcc-c---cccCCCcccCCCccCCC
Q 009972 206 GLC----HLSQLKVA-DFSYNFFVGSIPK-C---LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 206 ~~~----~l~~L~~L-~ls~N~l~g~ip~-~---l~~l~~l~~~~N~l~~~ 247 (521)
.+. ...+++.+ ++++|+++ .+|. . +.+|+.+++++|+++..
T Consensus 167 ~i~~~~~~~~~l~~~~~l~~n~l~-~l~~~~f~~l~~L~~L~Ls~N~l~~l 216 (242)
T d1xwdc1 167 EIHNCAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSL 216 (242)
T ss_dssp EECTTTTTTCCEEEEECTTCTTCC-CCCTTTTTTSCCCSEEECTTSCCCCC
T ss_pred ccccccccchhhhccccccccccc-cccHHHhcCCCCCCEEECCCCcCCcc
Confidence 432 12333333 34555555 3332 2 23445556666655543
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.46 E-value=3.2e-13 Score=130.41 Aligned_cols=110 Identities=26% Similarity=0.384 Sum_probs=68.1
Q ss_pred CEEEEEecCCCCc--ccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 71 RVLKINISGSSLK--GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 71 ~l~~L~L~~n~l~--~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
....++...|... ...+..+..+++|+.+++++|.++ .+|..+ +++|+.|++++|..++..|..|.+++.++.|+
T Consensus 125 ~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~ 201 (305)
T d1xkua_ 125 QMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLG 201 (305)
T ss_dssp TCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEE
T ss_pred cccccccccccccccCCCccccccccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhccccccccc
Confidence 3444555555432 233445666667777777777665 344332 45667777777776666666666677777777
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCC
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 184 (521)
+++|.+++..|..+.++++|++|+|++|+|+ .+|.
T Consensus 202 ~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~ 236 (305)
T d1xkua_ 202 LSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 236 (305)
T ss_dssp CCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred cccccccccccccccccccceeeeccccccc-cccc
Confidence 7777776666666666777777777777666 4443
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=3.9e-13 Score=116.37 Aligned_cols=102 Identities=24% Similarity=0.194 Sum_probs=84.9
Q ss_pred EecCCCCcccCCccccCCCCCCEEEcCCC-cccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccC
Q 009972 76 NISGSSLKGFLAPELGLLTYLQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGL 154 (521)
Q Consensus 76 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 154 (521)
+.+++++.. .|..+..+++|++|++++| .++...+..|.++++|+.|+|++|+|+...|..|..+++|++|+|++|+|
T Consensus 14 ~c~~~~~~~-~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l 92 (156)
T d2ifga3 14 RCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNAL 92 (156)
T ss_dssp ECCSSCCCT-TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCC
T ss_pred EecCCCCcc-CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCC
Confidence 334555554 5777888999999999766 58877778899999999999999999977788899999999999999999
Q ss_pred CCCCchhhhCCCCCCEEeCCCCcCC
Q 009972 155 TGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 155 ~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
+ .+|.......+|+.|+|++|.+.
T Consensus 93 ~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 93 E-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp S-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred c-ccChhhhccccccccccCCCccc
Confidence 9 56655555558999999999885
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.39 E-value=1.1e-12 Score=130.28 Aligned_cols=162 Identities=23% Similarity=0.367 Sum_probs=121.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEe
Q 009972 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|++++|.++.. +.+..+++|+.|++++|.+++..| +..+++|++|++++|++++. + .+..++.++.++
T Consensus 218 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~-~-~~~~~~~l~~l~ 291 (384)
T d2omza2 218 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-S-PLAGLTALTNLE 291 (384)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-G-GGTTCTTCSEEE
T ss_pred cCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCC-C-cccccccccccc
Confidence 35788888988888763 467888889999999988886443 77888899999988888854 3 377788888889
Q ss_pred cccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---cccCCCCCEEeccCCcccc
Q 009972 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g 225 (521)
++.|.+++ + ..+..+++++.|++++|++++..|- ....+++.+++++|.++. +..+++|++|++++|++++
T Consensus 292 ~~~n~l~~-~-~~~~~~~~l~~L~ls~n~l~~l~~l----~~l~~L~~L~L~~n~l~~l~~l~~l~~L~~L~l~~N~l~~ 365 (384)
T d2omza2 292 LNENQLED-I-SPISNLKNLTYLTLYFNNISDISPV----SSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISD 365 (384)
T ss_dssp CCSSCCSC-C-GGGGGCTTCSEEECCSSCCSCCGGG----GGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCB
T ss_pred cccccccc-c-cccchhcccCeEECCCCCCCCCccc----ccCCCCCEEECCCCCCCCChhHcCCCCCCEEECCCCcCCC
Confidence 88888885 3 3578888889999999988864331 123578888888888764 4567888999999998886
Q ss_pred CCc-cccccCCCcccCCC
Q 009972 226 SIP-KCLEYLPSTSFQGN 242 (521)
Q Consensus 226 ~ip-~~l~~l~~l~~~~N 242 (521)
..| ..+.+|+.|++++|
T Consensus 366 l~~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 366 LTPLANLTRITQLGLNDQ 383 (384)
T ss_dssp CGGGTTCTTCSEEECCCE
T ss_pred ChhhccCCCCCEeeCCCC
Confidence 555 23455666777766
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.35 E-value=2.8e-12 Score=118.21 Aligned_cols=166 Identities=20% Similarity=0.312 Sum_probs=126.4
Q ss_pred CccceeeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCccc
Q 009972 59 HWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI 138 (521)
Q Consensus 59 ~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 138 (521)
.+.|+.. -.+++.|++++|.+++..| +..+++|++|++++|.++. ++ .+..+++|+++++++|...+. ..+
T Consensus 55 ~l~~l~~---l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~-i~-~l~~l~~L~~l~l~~~~~~~~--~~~ 125 (227)
T d1h6ua2 55 TIEGVQY---LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV--TPL 125 (227)
T ss_dssp CCTTGGG---CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC--GGG
T ss_pred cchhHhc---CCCCcEeecCCceeecccc--ccccccccccccccccccc-cc-ccccccccccccccccccccc--chh
Confidence 4555443 4589999999999988543 8999999999999999874 44 588999999999999998754 346
Q ss_pred CCCcCCceEecccccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC---cccCCCCCE
Q 009972 139 GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKV 215 (521)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~ 215 (521)
...+.++.+.++.+.+.... .+.++++|+.|++++|.+++..+-.. ..+++.+++++|.+++ +..+++|++
T Consensus 126 ~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~~~l~~----l~~L~~L~Ls~n~l~~l~~l~~l~~L~~ 199 (227)
T d1h6ua2 126 AGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDLTPLAN----LSKLTTLKADDNKISDISPLASLPNLIE 199 (227)
T ss_dssp TTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCGGGTT----CTTCCEEECCSSCCCCCGGGGGCTTCCE
T ss_pred ccccchhhhhchhhhhchhh--hhccccccccccccccccccchhhcc----cccceecccCCCccCCChhhcCCCCCCE
Confidence 67888999999999887433 47788899999999998874333111 2578888999998876 456899999
Q ss_pred EeccCCccccCCc-cccccCCCccc
Q 009972 216 ADFSYNFFVGSIP-KCLEYLPSTSF 239 (521)
Q Consensus 216 L~ls~N~l~g~ip-~~l~~l~~l~~ 239 (521)
|++++|+++...| ..+.+|..+++
T Consensus 200 L~Ls~N~lt~i~~l~~l~~L~~L~l 224 (227)
T d1h6ua2 200 VHLKNNQISDVSPLANTSNLFIVTL 224 (227)
T ss_dssp EECTTSCCCBCGGGTTCTTCCEEEE
T ss_pred EECcCCcCCCCcccccCCCCCEEEe
Confidence 9999999984333 23344444444
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=2.8e-12 Score=110.85 Aligned_cols=110 Identities=16% Similarity=0.047 Sum_probs=91.6
Q ss_pred CCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCC-CCCCCCCcccCCCcCCceEecccccCCCCCchhhhCCCCCCE
Q 009972 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEE 170 (521)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 170 (521)
.....+.++.+++.+. ..|..+..+++|++|++++| .++...+..|.++++|+.|+|++|+|+...|.+|..+++|++
T Consensus 6 ~c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 84 (156)
T d2ifga3 6 CPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (156)
T ss_dssp CCSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CcCCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccc
Confidence 3445567899999988 57888999999999999866 588666678999999999999999999877889999999999
Q ss_pred EeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccc
Q 009972 171 LHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 171 L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~ 224 (521)
|+|++|+|+ .+|..... ..+|+.|+|++|.+.
T Consensus 85 L~Ls~N~l~-~l~~~~~~---------------------~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 85 LNLSFNALE-SLSWKTVQ---------------------GLSLQELVLSGNPLH 116 (156)
T ss_dssp EECCSSCCS-CCCSTTTC---------------------SCCCCEEECCSSCCC
T ss_pred eeccCCCCc-ccChhhhc---------------------cccccccccCCCccc
Confidence 999999998 66653322 125888999999885
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.23 E-value=3.9e-14 Score=127.96 Aligned_cols=116 Identities=22% Similarity=0.288 Sum_probs=86.7
Q ss_pred CCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCchhhhCC
Q 009972 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNL 165 (521)
Q Consensus 86 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 165 (521)
++..+..|++|++|+|++|+|+. ++ .+..+++|++|+|++|+|+ .+|..+..+++|+.|++++|+++. + +.+..+
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l 114 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKL 114 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHH
T ss_pred hhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccc
Confidence 45678888888888888888874 44 4788888888888888887 567666666788888888888884 4 347788
Q ss_pred CCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCccccC
Q 009972 166 ISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 166 ~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++|++++|+++. ++. +..+..+++|+.|++++|+++..
T Consensus 115 ~~L~~L~L~~N~i~~-~~~-------------------~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 115 VNLRVLYMSNNKITN-WGE-------------------IDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHSSEEEESEEECCC-HHH-------------------HHHHTTTTTCSEEEECSSHHHHH
T ss_pred ccccccccccchhcc-ccc-------------------cccccCCCccceeecCCCccccC
Confidence 888888888888862 211 01244577888888888887643
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=3.7e-11 Score=111.45 Aligned_cols=170 Identities=16% Similarity=0.119 Sum_probs=120.1
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCC-cccCCCcCCceEeccc
Q 009972 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVKINLQS 151 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~ 151 (521)
+.++.++.+++. +|+.+. +++++|+|++|+|+...+..|.++++|++|+|++|.+...+| ..|.+++.+++|++..
T Consensus 11 ~~i~c~~~~l~~-iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVTE-IPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCSS-CCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCCC-cCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 368889999984 676653 689999999999997666789999999999999999986554 5688999999999865
Q ss_pred -ccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCCCC-----cccC-CCCCEEeccCCccc
Q 009972 152 -NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHL-SQLKVADFSYNFFV 224 (521)
Q Consensus 152 -N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l-~~L~~L~ls~N~l~ 224 (521)
|++....+..|.++++|++|++++|++.. ++..........+.......+.+.. +..+ ..++.+++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~-~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~ 166 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKH-LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 166 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCS-CCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cccccccccccccccccccccccchhhhcc-cccccccccccccccccccccccccccccccccccccceeeeccccccc
Confidence 78887788889999999999999999984 4332211111222223333444433 2223 36888999999998
Q ss_pred cCCccccccCC---C-cccCCCccCCC
Q 009972 225 GSIPKCLEYLP---S-TSFQGNCLQNK 247 (521)
Q Consensus 225 g~ip~~l~~l~---~-l~~~~N~l~~~ 247 (521)
. ++....+.. . +.+.+|.+...
T Consensus 167 ~-i~~~~~~~~~l~~~~~l~~n~l~~l 192 (242)
T d1xwdc1 167 E-IHNCAFNGTQLDELNLSDNNNLEEL 192 (242)
T ss_dssp E-ECTTTTTTCCEEEEECTTCTTCCCC
T ss_pred c-cccccccchhhhccccccccccccc
Confidence 4 443332222 2 24456666554
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.22 E-value=7.1e-14 Score=126.22 Aligned_cols=109 Identities=22% Similarity=0.244 Sum_probs=93.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEec
Q 009972 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|+|+. ++ .+..+++|++|+|++|.|+ .+|..+..+++|++|++++|+++. ++ .+..+++|+.|+|
T Consensus 48 ~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~L 122 (198)
T d1m9la_ 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHHHHSSEEEE
T ss_pred cccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-ccccccccccccc
Confidence 579999999999986 44 5999999999999999998 567666667789999999999984 43 5888999999999
Q ss_pred ccccCCCCCc--hhhhCCCCCCEEeCCCCcCCccCCC
Q 009972 150 QSNGLTGRLP--AELGNLISLEELHLDRNRLQGAVPA 184 (521)
Q Consensus 150 s~N~l~g~~p--~~~~~l~~L~~L~Ls~N~l~g~~p~ 184 (521)
++|+++. ++ ..+..+++|++|+|++|.++...+.
T Consensus 123 ~~N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 158 (198)
T d1m9la_ 123 SNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCC-HHHHHHHTTTTTCSEEEECSSHHHHHHCT
T ss_pred ccchhcc-ccccccccCCCccceeecCCCccccCccc
Confidence 9999984 44 4689999999999999999855444
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.20 E-value=1.8e-10 Score=112.22 Aligned_cols=37 Identities=19% Similarity=0.107 Sum_probs=30.7
Q ss_pred CCCCCEEeccCCccccCCccccccCCCcccCCCccCCC
Q 009972 210 LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 210 l~~L~~L~ls~N~l~g~ip~~l~~l~~l~~~~N~l~~~ 247 (521)
+++|++|++++|+++ .+|..+.+|+.|++++|.++..
T Consensus 283 ~~~L~~L~Ls~N~l~-~lp~~~~~L~~L~L~~N~L~~l 319 (353)
T d1jl5a_ 283 PPSLEELNVSNNKLI-ELPALPPRLERLIASFNHLAEV 319 (353)
T ss_dssp CTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCSCC
T ss_pred CCCCCEEECCCCccC-ccccccCCCCEEECCCCcCCcc
Confidence 367899999999888 7888888888888888887764
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.10 E-value=6.8e-10 Score=108.09 Aligned_cols=134 Identities=22% Similarity=0.252 Sum_probs=100.6
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecc
Q 009972 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|||++++|+. +|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++.- .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred CCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence 57899999999986 6753 578999999999999 678654 57999999999998 55532 2469999999
Q ss_pred cccCCCCCchhhhCCCCCCEEeCCCCcCCccCCCCCCCcccccccccccccCCC---CCcccCCCCCEEeccCCccc
Q 009972 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL---TGLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l---~~~~~l~~L~~L~ls~N~l~ 224 (521)
+|.++ .+|. ++.+++|+.|++++|.++.. |... ..+..+.+..+.. ..+..++.++.+++++|.+.
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~-~~~~-----~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLKKL-PDLP-----PSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCSCC-CCCC-----TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCS
T ss_pred ccccc-cccc-hhhhccceeecccccccccc-cccc-----ccccchhhccccccccccccccccceeccccccccc
Confidence 99999 5774 68899999999999999843 3321 1222233333322 33556778888999988876
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=2e-10 Score=109.34 Aligned_cols=171 Identities=20% Similarity=0.164 Sum_probs=115.1
Q ss_pred CCEEEEEecCCCCccc-CCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCC-CCCCC-CCcccCCCcCCce
Q 009972 70 DRVLKINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGP-IPPEIGNLTGLVK 146 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~ 146 (521)
.++++|||+++.++.. ++..+..+++|++|+|+++.++...+..+..+++|++|+|+++ .++.. +..-..++++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 4789999999988754 3455788999999999999998888888999999999999985 55521 2222456889999
Q ss_pred Eecccc-cCCC-CCchhhhC-CCCCCEEeCCCC--cCCcc-CCCCCCCcccccccccccccCC-CC-----CcccCCCCC
Q 009972 147 INLQSN-GLTG-RLPAELGN-LISLEELHLDRN--RLQGA-VPAGSNSGYTANIHGMYASSAN-LT-----GLCHLSQLK 214 (521)
Q Consensus 147 L~Ls~N-~l~g-~~p~~~~~-l~~L~~L~Ls~N--~l~g~-~p~~~~~~~~~~l~~l~l~~n~-l~-----~~~~l~~L~ 214 (521)
|+|+++ .++. .++..+.. .++|+.|++++. .++.. +.. . ....+++..++++++. ++ .+..+++|+
T Consensus 126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~-l-~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~ 203 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLST-L-VRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 203 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHH-H-HHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred cccccccccccccchhhhcccccccchhhhcccccccccccccc-c-ccccccccccccccccCCCchhhhhhcccCcCC
Confidence 999985 4542 12233433 478999999864 33321 110 0 0012357777777653 43 356678999
Q ss_pred EEeccC-CccccCCccccc---cCCCcccCCC
Q 009972 215 VADFSY-NFFVGSIPKCLE---YLPSTSFQGN 242 (521)
Q Consensus 215 ~L~ls~-N~l~g~ip~~l~---~l~~l~~~~N 242 (521)
+|++++ +.++......+. +|+.+++.++
T Consensus 204 ~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 204 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 999998 567655544443 4555667665
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.74 E-value=4.4e-10 Score=109.88 Aligned_cols=177 Identities=18% Similarity=0.148 Sum_probs=106.8
Q ss_pred CCEEEEEecCCCCccc----CCccccCCCCCCEEEcCCCcccccCCc-------------ccCCCCCCcEEEccCCCCCC
Q 009972 70 DRVLKINISGSSLKGF----LAPELGLLTYLQELILHGNNLIGIIPK-------------ELGLLKRLKILDLGTNQLTG 132 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~-------------~~~~l~~L~~L~Ls~N~l~g 132 (521)
.+++.|+|++|.++.. +...+...++|++|++++|.+...-.. .....+.|+.|++++|+++.
T Consensus 93 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~ 172 (344)
T d2ca6a1 93 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 172 (344)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccc
Confidence 4677788888877653 333445677788888888776421100 11345677788887777652
Q ss_pred C----CCcccCCCcCCceEecccccCCCC-----CchhhhCCCCCCEEeCCCCcCCccCCCCCC--Cccccccccccccc
Q 009972 133 P----IPPEIGNLTGLVKINLQSNGLTGR-----LPAELGNLISLEELHLDRNRLQGAVPAGSN--SGYTANIHGMYASS 201 (521)
Q Consensus 133 ~----~p~~~~~l~~L~~L~Ls~N~l~g~-----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~~~~~l~~l~l~~ 201 (521)
. +...+...+.|+.|+|++|+++.. +...+..+++|+.|+|++|.++..-..... .....++..+++++
T Consensus 173 ~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~ 252 (344)
T d2ca6a1 173 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 252 (344)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred cccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhc
Confidence 1 222344567788888888887631 223456677888888888887532100000 00124566778888
Q ss_pred CCCCC---------c--ccCCCCCEEeccCCccccC----Cccc----cccCCCcccCCCccCC
Q 009972 202 ANLTG---------L--CHLSQLKVADFSYNFFVGS----IPKC----LEYLPSTSFQGNCLQN 246 (521)
Q Consensus 202 n~l~~---------~--~~l~~L~~L~ls~N~l~g~----ip~~----l~~l~~l~~~~N~l~~ 246 (521)
|.++. + .....|+.||+++|+++.. +... ...++.+++++|++..
T Consensus 253 n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 253 CLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 87763 1 1235688888888887532 2222 2457778888887755
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.67 E-value=1.7e-09 Score=102.65 Aligned_cols=167 Identities=20% Similarity=0.163 Sum_probs=110.8
Q ss_pred EEEecCCCCcccCCccccCCCCCCEEEcCCCccccc-CCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccc
Q 009972 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (521)
Q Consensus 74 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (521)
.+.++...+...+ ........|++|||+++.++.. ++..+..+++|++|+|+++.++...+..++.+++|++|+|+++
T Consensus 27 ~lrl~~~~~~~~~-~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c 105 (284)
T d2astb2 27 AFRCPRSFMDQPL-AEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 105 (284)
T ss_dssp EEECTTCEECSCC-CSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTC
T ss_pred Eeeccccccccch-hhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCcccccc
Confidence 3444444433322 2334567899999999988744 4556788999999999999998888888999999999999995
Q ss_pred -cCCCC-CchhhhCCCCCCEEeCCCC-cCCccCCCCCCCcccccccccccccC--CCCC------cccCCCCCEEeccCC
Q 009972 153 -GLTGR-LPAELGNLISLEELHLDRN-RLQGAVPAGSNSGYTANIHGMYASSA--NLTG------LCHLSQLKVADFSYN 221 (521)
Q Consensus 153 -~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~~~~~~l~~l~l~~n--~l~~------~~~l~~L~~L~ls~N 221 (521)
.++.. +..-+.++++|++|+++++ .++...-..........+..+++++. .++. ...+++|+.|++++|
T Consensus 106 ~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~ 185 (284)
T d2astb2 106 SGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDS 185 (284)
T ss_dssp BSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTC
T ss_pred ccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccc
Confidence 56632 2333467899999999985 45421100000001135666666643 3332 235789999999986
Q ss_pred -ccccCCccccc---cCCCcccCC
Q 009972 222 -FFVGSIPKCLE---YLPSTSFQG 241 (521)
Q Consensus 222 -~l~g~ip~~l~---~l~~l~~~~ 241 (521)
.+++..+..+. +|+.+++++
T Consensus 186 ~~itd~~~~~l~~~~~L~~L~L~~ 209 (284)
T d2astb2 186 VMLKNDCFQEFFQLNYLQHLSLSR 209 (284)
T ss_dssp TTCCGGGGGGGGGCTTCCEEECTT
T ss_pred cCCCchhhhhhcccCcCCEEECCC
Confidence 46766665554 455566766
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.62 E-value=1.8e-09 Score=105.32 Aligned_cols=156 Identities=15% Similarity=0.112 Sum_probs=113.0
Q ss_pred CCEEEEEecCCCCcccCCc-------------cccCCCCCCEEEcCCCccccc----CCcccCCCCCCcEEEccCCCCCC
Q 009972 70 DRVLKINISGSSLKGFLAP-------------ELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTG 132 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~-------------~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g 132 (521)
.+++.|++++|.+...-.. .....+.|+.|++++|++... +...+...+.|+.|+|++|+++.
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 200 (344)
T d2ca6a1 121 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 200 (344)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred ccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhcccccccccccc
Confidence 4799999999987532111 124577899999999988632 33445678899999999999863
Q ss_pred C-----CCcccCCCcCCceEecccccCCCC----CchhhhCCCCCCEEeCCCCcCCccCCCCCC----Cccccccccccc
Q 009972 133 P-----IPPEIGNLTGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQGAVPAGSN----SGYTANIHGMYA 199 (521)
Q Consensus 133 ~-----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~~~~~~l~~l~l 199 (521)
. +...+..+++|+.|+|++|.++.. +...+..+++|++|+|++|.+++.-..... ......+..+++
T Consensus 201 ~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~l 280 (344)
T d2ca6a1 201 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 280 (344)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEEC
T ss_pred cccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEEC
Confidence 2 334567889999999999998732 445677899999999999998743111000 001145788999
Q ss_pred ccCCCCC---------c-ccCCCCCEEeccCCcccc
Q 009972 200 SSANLTG---------L-CHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 200 ~~n~l~~---------~-~~l~~L~~L~ls~N~l~g 225 (521)
++|.++. + .+.++|+.|++++|+|..
T Consensus 281 s~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 281 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 9999863 2 247889999999999963
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=1.5e-08 Score=101.80 Aligned_cols=110 Identities=29% Similarity=0.306 Sum_probs=86.9
Q ss_pred CEEEEEecCCCCcccC-CccccCCCCCCEEEcCCCcccc----cCCcccCCCCCCcEEEccCCCCCC----CCCcccC-C
Q 009972 71 RVLKINISGSSLKGFL-APELGLLTYLQELILHGNNLIG----IIPKELGLLKRLKILDLGTNQLTG----PIPPEIG-N 140 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~-~ 140 (521)
+|+.||+++|++++.- ..-+..+++|+.|+|++|.++. .+...+..+++|++|||++|.|+. .+...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 6899999999998642 3446778999999999999873 345667889999999999999852 1222333 2
Q ss_pred CcCCceEecccccCCCC----CchhhhCCCCCCEEeCCCCcCCc
Q 009972 141 LTGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 141 l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
..+|+.|+|++|+++.. ++..+..+++|++|+|++|.++.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 35799999999999853 45677889999999999999863
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.35 E-value=1.2e-06 Score=81.18 Aligned_cols=147 Identities=16% Similarity=0.072 Sum_probs=94.1
Q ss_pred HHHHHHhhhh-hhhCcCC-CeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCccceeeeEeecC
Q 009972 354 ELEVACEDFS-NIIGSSP-DSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRES 430 (521)
Q Consensus 354 ~l~~~~~~f~-~~lg~G~-~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~ 430 (521)
|+.+..+.+. ....+|. .+.||+... +++.+.+|+....... ....+.+|...+..+. +--+.+++.++..+
T Consensus 8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~----~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~ 82 (263)
T d1j7la_ 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHD 82 (263)
T ss_dssp HHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEET
T ss_pred HHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCccc----chhhHHHHHHHHHHHhccCCCCcEEEEEecC
Confidence 3444444443 2223444 468999865 4456778876332211 1224677888877663 33356777777766
Q ss_pred CCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC----------------------------
Q 009972 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL---------------------------- 482 (521)
Q Consensus 431 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------- 482 (521)
+ ..++|||++++.++.+..... ....+++.++++.++.||+..
T Consensus 83 ~--~~~lv~~~l~G~~~~~~~~~~-------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (263)
T d1j7la_ 83 G--WSNLLMSEADGVLCSEEYEDE-------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADV 153 (263)
T ss_dssp T--EEEEEEECCSSEEHHHHTTTC-------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCC
T ss_pred C--ceEEEEEeccccccccccccc-------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhh
Confidence 5 789999999998876654211 123345666677777777532
Q ss_pred ----------------------------CCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 483 ----------------------------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 483 ----------------------------~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
.+.++|+|+.|.|||++++...-|.||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 154 DCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 02378999999999999877778999987764
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.28 E-value=6.5e-08 Score=83.25 Aligned_cols=86 Identities=21% Similarity=0.141 Sum_probs=53.9
Q ss_pred CccccCCCCCCEEEcCCCccccc--CCcccCCCCCCcEEEccCCCCCCCCCcccCCCcCCceEecccccCCCCCch----
Q 009972 87 APELGLLTYLQELILHGNNLIGI--IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA---- 160 (521)
Q Consensus 87 p~~l~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~---- 160 (521)
+..+..++.|++|+|++|+|+.. ++..+..+++|+.|||++|.++..-+-.+....+|+.|+|++|.++.....
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y 137 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTY 137 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHH
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhH
Confidence 33345677777888888877743 234456677777888888877732222333344677777777777754432
Q ss_pred ---hhhCCCCCCEEe
Q 009972 161 ---ELGNLISLEELH 172 (521)
Q Consensus 161 ---~~~~l~~L~~L~ 172 (521)
.+..+|+|+.||
T Consensus 138 ~~~i~~~~P~L~~LD 152 (162)
T d1koha1 138 ISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHTTSTTCCEET
T ss_pred HHHHHHHCCCCCEEC
Confidence 245677777775
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.28 E-value=1.3e-08 Score=87.85 Aligned_cols=104 Identities=21% Similarity=0.193 Sum_probs=71.7
Q ss_pred EEEecCCCCcccCCccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEEccCCCCCCC--CCcccCCCcCCceEeccc
Q 009972 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP--IPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 74 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~Ls~ 151 (521)
.||++++... +.+..+..+..|++.+|... .++..+..+++|++|+|++|+|+.. ++..+..+++|+.|+|++
T Consensus 26 ~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~ 100 (162)
T d1koha1 26 ALDLKGLRSD----PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSG 100 (162)
T ss_dssp CBCCCCCSSC----TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTT
T ss_pred eeecccCCCC----chhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCccccccccc
Confidence 3555544421 23444555555555555433 4555566789999999999999853 234567899999999999
Q ss_pred ccCCCCCchhhhCCCCCCEEeCCCCcCCccC
Q 009972 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAV 182 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 182 (521)
|.++...+-.+....+|+.|++++|.++...
T Consensus 101 N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~ 131 (162)
T d1koha1 101 NELKSERELDKIKGLKLEELWLDGNSLSDTF 131 (162)
T ss_dssp SCCCCGGGHHHHTTCCCSSCCCTTSTTSSSS
T ss_pred CccccchhhhhhhccccceeecCCCCcCcCc
Confidence 9999544434555668999999999997543
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.24 E-value=2.5e-08 Score=100.18 Aligned_cols=175 Identities=17% Similarity=0.122 Sum_probs=105.2
Q ss_pred CCEEEEEecCCCCcc-----cCCccccCCCCCCEEEcCCCccccc----CCcccCCCCCCcEEEccCCCCCCCCCcc---
Q 009972 70 DRVLKINISGSSLKG-----FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGPIPPE--- 137 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~-----~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~--- 137 (521)
..++.+++++|.+.. ..+........|+.|++++|.+... ....+...+.++.+++++|.++......
T Consensus 226 ~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~ 305 (460)
T d1z7xw1 226 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 305 (460)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred ccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhc
Confidence 456778888877642 2233445567788888888877633 2233456777888888888775321111
Q ss_pred -c-CCCcCCceEecccccCCCCCch----hhhCCCCCCEEeCCCCcCCcc----CCCCCCCcccccccccccccCCCCC-
Q 009972 138 -I-GNLTGLVKINLQSNGLTGRLPA----ELGNLISLEELHLDRNRLQGA----VPAGSNSGYTANIHGMYASSANLTG- 206 (521)
Q Consensus 138 -~-~~l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~~~~~~l~~l~l~~n~l~~- 206 (521)
+ .....|+.+++++|.++..-.. .+...++|++|+|++|++++. ++..... ....+..+++++|.++.
T Consensus 306 ~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~-~~~~L~~L~Ls~n~i~~~ 384 (460)
T d1z7xw1 306 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQ-PGSVLRVLWLADCDVSDS 384 (460)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTS-TTCCCCEEECTTSCCCHH
T ss_pred cccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhc-ccCCCCEEECCCCCCChH
Confidence 1 2345788888888887754333 334556788888888887632 1110000 01246667777777753
Q ss_pred --------cccCCCCCEEeccCCccccCCccc----c----ccCCCcccCCCccC
Q 009972 207 --------LCHLSQLKVADFSYNFFVGSIPKC----L----EYLPSTSFQGNCLQ 245 (521)
Q Consensus 207 --------~~~l~~L~~L~ls~N~l~g~ip~~----l----~~l~~l~~~~N~l~ 245 (521)
+...++|++|||++|+++...... + ..|+.+.+.+|.+.
T Consensus 385 ~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~ 439 (460)
T d1z7xw1 385 SCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439 (460)
T ss_dssp HHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred HHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCC
Confidence 334678999999999886432222 1 24566667666544
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.16 E-value=2.7e-06 Score=78.19 Aligned_cols=131 Identities=14% Similarity=0.073 Sum_probs=82.9
Q ss_pred hhCcCCC-eeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC--CccceeeeEeecCCCCceEEEEee
Q 009972 365 IIGSSPD-SLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~lg~G~~-g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+..|.. +.||+...+++..+.+|...... ...+.+|.+.++.+.. -.+.++++++.+.+ ..++||||
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~-------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~--~~~~v~~~ 87 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGE 87 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT-------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEEC
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC-------HhHHHHHHHHHHHHHhcCCCCCceeeeccccc--ceEEEEEe
Confidence 3445543 67999998888888888653221 1236677777776633 33556777777665 78999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 009972 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT----------------------------------------- 480 (521)
Q Consensus 442 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~----------------------------------------- 480 (521)
+++-++.+.. .. ...++.++++.|+-||+
T Consensus 88 i~G~~~~~~~-------~~---~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T d1nd4a_ 88 VPGQDLLSSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 157 (255)
T ss_dssp CSSEETTTSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred eecccccccc-------cc---HHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhH
Confidence 9876554311 00 11122233333333332
Q ss_pred ----------CC----CCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 481 ----------EL----GPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 481 ----------~~----~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
.. .+.++|+|+.|.|||++++..+.|.||+.+..
T Consensus 158 ~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~ 205 (255)
T d1nd4a_ 158 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 205 (255)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence 11 12479999999999999887788999998764
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.67 E-value=7.8e-06 Score=70.13 Aligned_cols=109 Identities=11% Similarity=0.091 Sum_probs=73.3
Q ss_pred CCEEEEEecCC-CCccc----CCccccCCCCCCEEEcCCCccccc----CCcccCCCCCCcEEEccCCCCCCC----CCc
Q 009972 70 DRVLKINISGS-SLKGF----LAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPP 136 (521)
Q Consensus 70 ~~l~~L~L~~n-~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 136 (521)
+.++.|+|+++ .++.. +-..+...+.|++|+|++|.+... +...+...+.|+.|+|++|.++.. +-.
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 56888999874 45432 333566778899999999888632 223345567889999999988632 123
Q ss_pred ccCCCcCCceEecccccCCCC-------CchhhhCCCCCCEEeCCCCcC
Q 009972 137 EIGNLTGLVKINLQSNGLTGR-------LPAELGNLISLEELHLDRNRL 178 (521)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g~-------~p~~~~~l~~L~~L~Ls~N~l 178 (521)
.+...+.|++|+|++|.+... +...+...++|+.|+++.+..
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 456667889999988876521 234455568888888876643
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.61 E-value=9.9e-05 Score=72.21 Aligned_cols=78 Identities=14% Similarity=0.063 Sum_probs=46.6
Q ss_pred hhhCcCCCeeEEEEEeCC-CCEEEEEEeeeec----cccchhhHHHHHHHHHHHhcc-CC--CccceeeeEeecCCCCce
Q 009972 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKE----EHWTGYLELYFQREVADLARI-NH--ENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~-~~~vavk~~~~~~----~~~~~~~~~~~~~E~~~l~~l-~H--~niv~l~g~~~~~~~~~~ 435 (521)
+.||.|....||+....+ ++.++||.-...- +.+.. ...+...|.+.+..+ .+ ..+.+++.+.. . ..
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~-~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~--~--~~ 106 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPL-TIDRARIESSALIRQGEHVPHLVPRVFYSDT--E--MA 106 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCC-CTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--T--TT
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCC-CHHHHHHHHHHHHHhhhhCCCCcceEEEEcC--C--CC
Confidence 568999999999998864 6788888643211 11111 112345677777655 22 33455555543 3 45
Q ss_pred EEEEeeCCCCC
Q 009972 436 MLVFDYASNGT 446 (521)
Q Consensus 436 ~lv~ey~~~g~ 446 (521)
++||||+++..
T Consensus 107 ~lvmE~L~~~~ 117 (392)
T d2pula1 107 VTVMEDLSHLK 117 (392)
T ss_dssp EEEECCCTTSE
T ss_pred EEEEeccCCcc
Confidence 89999998644
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.33 E-value=5.2e-05 Score=64.74 Aligned_cols=89 Identities=19% Similarity=0.114 Sum_probs=66.1
Q ss_pred cCCCCCCEEEcCCC-ccccc----CCcccCCCCCCcEEEccCCCCCC----CCCcccCCCcCCceEecccccCCCC----
Q 009972 91 GLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGR---- 157 (521)
Q Consensus 91 ~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~---- 157 (521)
.+.+.|++|+|+++ .++.. +-..+...++|++|+|++|.+.. .+...+...+.|+.|+|++|.++..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 45688999999974 46532 23356778899999999999862 2223455568899999999998842
Q ss_pred CchhhhCCCCCCEEeCCCCcCC
Q 009972 158 LPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 158 ~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
+-..+...++|++|+|++|++.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHHhCCcCCEEECCCCcCC
Confidence 2234667789999999999775
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.95 E-value=7.8e-05 Score=63.48 Aligned_cols=110 Identities=17% Similarity=0.241 Sum_probs=76.2
Q ss_pred CCCEEEEEecC-CCCccc----CCccccCCCCCCEEEcCCCccccc----CCcccCCCCCCcEEEccCCCCCCC----CC
Q 009972 69 RDRVLKINISG-SSLKGF----LAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (521)
Q Consensus 69 ~~~l~~L~L~~-n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 135 (521)
.+.++.|+|++ +.++.. +-..+...++|++|+|++|.++.. +-..+...++|+.|++++|.++.. +-
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~ 95 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 95 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHH
Confidence 35788899987 456532 334566788999999999988643 223455678899999999988632 22
Q ss_pred cccCCCcCCceEec--ccccCCC----CCchhhhCCCCCCEEeCCCCcC
Q 009972 136 PEIGNLTGLVKINL--QSNGLTG----RLPAELGNLISLEELHLDRNRL 178 (521)
Q Consensus 136 ~~~~~l~~L~~L~L--s~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l 178 (521)
..+...++|+.++| +.|.+.. .+...+...++|+.|+++.+..
T Consensus 96 ~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 96 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 45666788886554 5677753 3445566788999999987654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.89 E-value=0.0021 Score=60.62 Aligned_cols=134 Identities=7% Similarity=0.028 Sum_probs=74.5
Q ss_pred eeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccc--eeeeE-----eecCCCCceEEEEeeCCC
Q 009972 372 SLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG--KLLGY-----CRESSPFTRMLVFDYASN 444 (521)
Q Consensus 372 g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv--~l~g~-----~~~~~~~~~~lv~ey~~~ 444 (521)
-.||+++.++|..+++|...... ...+++..|.+.+..+....+. ..+.. ..... ..+.+++|+++
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~-----~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~--~~~~l~~~~~G 108 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPER-----WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYFAVFPSVGG 108 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEEEEEECCCC
T ss_pred ceeEEEEcCCCCEEEEEEeCCCC-----CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeee--EEEEEEeecCC
Confidence 47999999999999999863321 1235577888888777433321 11111 11122 57889999976
Q ss_pred CChhh-----h---------hhc----C---CCCCCCHH-------------------HHHHHHHHHHHHHHHHhc----
Q 009972 445 GTLYE-----H---------LHY----G---ERCQVSWT-------------------RRMKIVIGIARGLKYLHT---- 480 (521)
Q Consensus 445 g~L~~-----~---------l~~----~---~~~~l~~~-------------------~~~~i~~~ia~gL~yLH~---- 480 (521)
..+.. + +|. . .+..+++. .+..+...+.+.++.+..
T Consensus 109 ~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 188 (325)
T d1zyla1 109 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 188 (325)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCCCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccc
Confidence 43221 1 110 0 01112221 111122222333333322
Q ss_pred CCCCCeeecCCCCCCeeecCCCCeeeCCCchhhh
Q 009972 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 481 ~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~~ 514 (521)
....+++|+|+.+.|||++++ ..+.||+-+..
T Consensus 189 ~~p~~liHgDlh~~NvL~~~~--~~~IDFdd~~~ 220 (325)
T d1zyla1 189 DFTVLRLHGDCHAGNILWRDG--PMFVDLDDARN 220 (325)
T ss_dssp CSCCEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred cCCceeecCCCCcccEEEeCC--ceEEechhccc
Confidence 223478999999999999754 45899997653
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.20 E-value=0.0065 Score=56.69 Aligned_cols=157 Identities=8% Similarity=-0.001 Sum_probs=79.7
Q ss_pred cCHHHHHHHHhhhh-------hhhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCccc-
Q 009972 350 FSRQELEVACEDFS-------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG- 421 (521)
Q Consensus 350 ~~~~~l~~~~~~f~-------~~lg~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv- 421 (521)
++.+|+......|. +.|..|---+.|+.+..+|+ +++|+..... ..++...|++++..+...++.
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~------~~~~l~~~~~~l~~L~~~g~pv 75 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSC 75 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC------CHHHHHHHHHHHHhhhhccccc
Confidence 45567777777664 23556766789999887765 7888763221 112355577777776433322
Q ss_pred -eeeeEeecC----CCCceEEEEeeCCCCChhhh--------------hhc---C-----CCCCC-CH------------
Q 009972 422 -KLLGYCRES----SPFTRMLVFDYASNGTLYEH--------------LHY---G-----ERCQV-SW------------ 461 (521)
Q Consensus 422 -~l~g~~~~~----~~~~~~lv~ey~~~g~L~~~--------------l~~---~-----~~~~l-~~------------ 461 (521)
..+...... -......++.+..+...... ++. . ..... .|
T Consensus 76 p~pi~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
T d2ppqa1 76 PLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERA 155 (316)
T ss_dssp CCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGG
T ss_pred cccceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhh
Confidence 111110000 01145667777665333211 110 0 00000 00
Q ss_pred ----HHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeeeCCCchhh
Q 009972 462 ----TRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 462 ----~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dlk~~NILld~~~~~kl~DfGla~ 513 (521)
......+......+.-.+. ....++||+|+.+.||+++++...-|.||+.+.
T Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 156 DEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp GGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhcchhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence 0111122222222222222 123479999999999999998888899999864
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.84 E-value=0.016 Score=55.86 Aligned_cols=72 Identities=13% Similarity=0.136 Sum_probs=45.4
Q ss_pred hhhCcCCCeeEEEEEeCCC--------CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCcc-ceeeeEeecCCCCc
Q 009972 364 NIIGSSPDSLVYKGTMKGG--------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~lg~G~~g~Vy~~~~~~~--------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~ 434 (521)
+.|+.|-.-.+|++..+++ +.|.+++.. .... .....+|..+++.+.-.++ .++++++. +
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~-----~idr~~E~~i~~~ls~~gl~Pkll~~~~--~--- 116 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPET-----ESHLVAESVIFTLLSERHLGPKLYGIFS--G--- 116 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCC-----HHHHHHHHHHHHHHHHTTSSSCEEEEET--T---
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccch-----hhHHHHHHHHHHHHHhCCCCCeEEEEcC--C---
Confidence 5678888899999988643 345555432 2111 1234578888887743344 47777763 2
Q ss_pred eEEEEeeCCCCCh
Q 009972 435 RMLVFDYASNGTL 447 (521)
Q Consensus 435 ~~lv~ey~~~g~L 447 (521)
.+|+||+++-.+
T Consensus 117 -g~I~efi~g~~l 128 (395)
T d1nw1a_ 117 -GRLEEYIPSRPL 128 (395)
T ss_dssp -EEEECCCCEEEC
T ss_pred -ceEEEEeccccC
Confidence 589999987444
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.35 E-value=0.0027 Score=53.40 Aligned_cols=118 Identities=20% Similarity=0.164 Sum_probs=73.8
Q ss_pred cccCCCCCCEEEcCC-Cccccc----CCcccCCCCCCcEEEccCCCCCCCC----CcccCCCcCCceEecccccCCCC--
Q 009972 89 ELGLLTYLQELILHG-NNLIGI----IPKELGLLKRLKILDLGTNQLTGPI----PPEIGNLTGLVKINLQSNGLTGR-- 157 (521)
Q Consensus 89 ~l~~l~~L~~L~L~~-N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~----p~~~~~l~~L~~L~Ls~N~l~g~-- 157 (521)
...+.+.|++|+|++ +.++.. +-..+...++|+.|+|++|.++... -..+...+.|+.|++++|.++..
T Consensus 12 ~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~ 91 (166)
T d1io0a_ 12 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 91 (166)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhH
Confidence 345678899999987 456422 2344567888999999999886321 12345567899999999888632
Q ss_pred --CchhhhCCCCCCEEeCC--CCcCCccCCCCCCCcccccccccccccCCCCCcccCCCCCEEeccCCcc
Q 009972 158 --LPAELGNLISLEELHLD--RNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFF 223 (521)
Q Consensus 158 --~p~~~~~l~~L~~L~Ls--~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l 223 (521)
+-..+...++|+.++|+ .|.+....-. .+. ..+...++|+.|+++.|..
T Consensus 92 ~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~--------~La---------~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 92 LALVEALQSNTSLIELRIDNQSQPLGNNVEM--------EIA---------NMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHH--------HHH---------HHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHhCccccEEeeccCCCcCcHHHHH--------HHH---------HHHHhCCCcCEEeCcCCCC
Confidence 23455677888876664 4555311000 000 0123456789999887754
|