BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009973
(521 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/432 (85%), Positives = 397/432 (91%), Gaps = 8/432 (1%)
Query: 96 DIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI 155
D VPE+ Q QEK ++ + G EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI
Sbjct: 119 DQVPENYQAQEKG-HDADTVSGGIEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI 177
Query: 156 VEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAP 215
VEETRARIKILDGPPGTTERAVM+SAKEEP+S+LPPAMDGLLRVHKRIVDGLD DSSHA
Sbjct: 178 VEETRARIKILDGPPGTTERAVMVSAKEEPDSALPPAMDGLLRVHKRIVDGLDGDSSHAS 237
Query: 216 SGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVE 275
SGTG KVST+LLVPASQAGSLIGKQGGTVKSIQEAS+C+VRVLGAEDLPVFALQDDRVVE
Sbjct: 238 SGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVE 297
Query: 276 VVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPN-PQMDHIPPPQSWGPPQGLP 334
V+GDA+GVHKA+ELI SHLRKFLVDRSIIPLFEMHMQM N P M+H+PP QSWGPPQG+P
Sbjct: 298 VLGDAAGVHKAVELIASHLRKFLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIP 357
Query: 335 PS--GGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNA 392
P+ GGPGYG NPQYMPPPRQ E+YYPPADLPPPMEKQPHQGISAYGREAP+ VHGSSN+
Sbjct: 358 PNAGGGPGYG-NPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNS 416
Query: 393 QSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
Q+ PSMITQ+TQQMQIPLSYADAVIGTAG SISYIRR+SGATVTIQETRGVPGEMTVEIS
Sbjct: 417 QAAPSMITQITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEIS 476
Query: 453 GTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYA---SMYGSPPSNPGHAGHAG 509
GTASQVQTAQQLIQNFMAEA AP+QAQ G S DQGYNPYA S+Y SPPSNPGHAGH G
Sbjct: 477 GTASQVQTAQQLIQNFMAEAGAPTQAQTGGSTDQGYNPYAAHGSVYASPPSNPGHAGHTG 536
Query: 510 GYGSVYGSNYGY 521
GYGSVYG+NYGY
Sbjct: 537 GYGSVYGTNYGY 548
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 17/174 (9%)
Query: 8 FVEHDGNHDLEQIPENQEVENQVPGYEVP------EYEVPEVPQEQVPQEQVPESQVTKE 61
+EHD +H +Q+PEN + + + G++ E + P P E V + VP +V
Sbjct: 109 VIEHDIDHATDQVPENYQAQEK--GHDADTVSGGIEKKWPGWPGESVFRMLVPAQKVGSI 166
Query: 62 QVTEDQLTEDQVPE--------DHVPEDQVPEDHVPEDQVPEDIV-PEDSQLQEKQENEV 112
+ + + V E D P V + P+ + P L + V
Sbjct: 167 IGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSALPPAMDGLLRVHKRIV 226
Query: 113 NLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 166
+ G + G + R+LVPA + GS+IG++G +K I E + +++L
Sbjct: 227 DGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQEASSCVVRVL 280
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/392 (85%), Positives = 361/392 (92%), Gaps = 4/392 (1%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAM 193
MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM+SAKEEP+SSLPPAM
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 194 DGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNC 253
DGLLRVHKRI+DGLDSDSS+ P +G KVST+LLVPASQAGSLIGKQGGTVKSIQEAS C
Sbjct: 61 DGLLRVHKRIIDGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASTC 120
Query: 254 IVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQM 313
IVRVLGAEDLPVFALQDDRVVEV+G+A+GVHKA+ELI SHLRKFLVDRSIIPLFEM MQM
Sbjct: 121 IVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRSIIPLFEMQMQM 180
Query: 314 PNPQMDHIPPPQSWGPPQGLPPS--GGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQP 371
NP M+ +PP QSWGPPQ LPP+ GGPGYG NPQYMPPPRQ ++YYPPAD+PP MEKQP
Sbjct: 181 SNPSMEQMPPHQSWGPPQPLPPNHGGGPGYGQNPQYMPPPRQLDNYYPPADMPPLMEKQP 240
Query: 372 HQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSS 431
HQGISAYGREAP+ H SSNAQ+ PSMITQ+TQQMQIPLSYADAVIGTAGASISYIRR+S
Sbjct: 241 HQGISAYGREAPMGSHASSNAQAAPSMITQITQQMQIPLSYADAVIGTAGASISYIRRAS 300
Query: 432 GATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPY 491
GATVTIQETRGVPG MTVEISGTASQVQTAQQLIQNFMAEA AP+Q Q G +ADQGYNPY
Sbjct: 301 GATVTIQETRGVPGAMTVEISGTASQVQTAQQLIQNFMAEAGAPAQPQTGGAADQGYNPY 360
Query: 492 --ASMYGSPPSNPGHAGHAGGYGSVYGSNYGY 521
+S+Y SPPSNP H GHAGGYGS+YG+NYGY
Sbjct: 361 SHSSVYASPPSNPEHTGHAGGYGSMYGANYGY 392
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 333/418 (79%), Positives = 366/418 (87%), Gaps = 14/418 (3%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE 174
AV EKKWPGWPGESVFRMLVPAQKVG IIGRKGEFIKKIVEETRAR+KILDGPPGT +
Sbjct: 32 AVVVAEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQ 91
Query: 175 RAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
RAVMISAKEEP SS+PPA+DGLLRVHKRI+DGL+SD +HAPSG GKVSTKLLVPASQAG
Sbjct: 92 RAVMISAKEEPGSSVPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAG 151
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
SLIGKQGGTVKSIQEASNCIVRVLGAEDLP+FALQDDRVVEVVGD +GVHKA+ELI SHL
Sbjct: 152 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHL 211
Query: 295 RKFLVDRSIIPLFEMHMQMPNP-QMDHIPPPQSWGPPQGLPPS--GGPGYGHNPQYMPPP 351
RKFLVDR +IP+FEM+MQ N +H+PP QSWGPPQGLPP+ GG G+G QYMPPP
Sbjct: 212 RKFLVDRGVIPIFEMNMQTANTHHAEHMPPHQSWGPPQGLPPNVGGGSGFGPPSQYMPPP 271
Query: 352 RQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
RQ +SYYPPA++PPP+++QPHQGISAYGR+A + VH SSN QS PS++TQ+TQQMQIPLS
Sbjct: 272 RQLDSYYPPAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLS 331
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM-- 469
YADAVIGTAGASISYIRR+SGATVTIQE RGVPGEMTVEISGTASQVQTAQQLIQNFM
Sbjct: 332 YADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAE 391
Query: 470 --AEAAAPSQAQMGA-SADQGYNPY---ASMYGSPPSNPGHAGHAGGYGSVYGSNYGY 521
A AAAP+Q Q +ADQGYN Y S+Y SPPSNP GHAGGY SVYG+NYGY
Sbjct: 392 AAAAAAAPAQPQTTVPAADQGYNSYPAHGSLYASPPSNP---GHAGGYSSVYGANYGY 446
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 353/431 (81%), Positives = 382/431 (88%), Gaps = 7/431 (1%)
Query: 96 DIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI 155
D +PEDSQ Q+K+ + + A+G EK+WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI
Sbjct: 83 DQLPEDSQPQQKRGRDDDSAIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI 142
Query: 156 VEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAP 215
VEETRARIKILDGPPGT ERAVM+SAKEEP+SSLPPAMDGLL+VHKRIVDGL+ DSSH P
Sbjct: 143 VEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMP 202
Query: 216 SGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVE 275
GGKVST+LLV ASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP+FALQDDRVVE
Sbjct: 203 --PGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVE 260
Query: 276 VVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP 335
VVG+ GVHKA+ELI SHLRKFLVDRS+IPLFEM MQM NP ++H+PP Q WGPPQGLPP
Sbjct: 261 VVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIEHMPPHQPWGPPQGLPP 320
Query: 336 --SGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQ 393
SGGPG+G NP YMPPPRQ +SYYPP +LPPP+EKQPHQGISAYGRE P+ H S+AQ
Sbjct: 321 NASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQ 380
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
PSMITQVTQQMQIPLSYADAVIGTAGASISYIRR+SGATVTIQETRGVPGEMTVEI+G
Sbjct: 381 PAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEING 440
Query: 454 TASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYA---SMYGSPPSNPGHAGHAGG 510
TASQVQ AQQLIQNFMAEAAAP+QAQ G SADQGYN YA SMY SP SNP HA H GG
Sbjct: 441 TASQVQAAQQLIQNFMAEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHTGG 500
Query: 511 YGSVYGSNYGY 521
YG VYG+NYGY
Sbjct: 501 YGPVYGANYGY 511
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 353/431 (81%), Positives = 382/431 (88%), Gaps = 7/431 (1%)
Query: 96 DIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI 155
D +PEDSQ Q+K+ + + A+G EK+WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI
Sbjct: 14 DQLPEDSQPQQKRGRDDDSAIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI 73
Query: 156 VEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAP 215
VEETRARIKILDGPPGT ERAVM+SAKEEP+SSLPPAMDGLL+VHKRIVDGL+ DSSH P
Sbjct: 74 VEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMP 133
Query: 216 SGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVE 275
GGKVST+LLV ASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP+FALQDDRVVE
Sbjct: 134 --PGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVE 191
Query: 276 VVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP 335
VVG+ GVHKA+ELI SHLRKFLVDRS+IPLFEM MQM NP ++H+PP Q WGPPQGLPP
Sbjct: 192 VVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIEHMPPHQPWGPPQGLPP 251
Query: 336 --SGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQ 393
SGGPG+G NP YMPPPRQ +SYYPP +LPPP+EKQPHQGISAYGRE P+ H S+AQ
Sbjct: 252 NASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQ 311
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
PSMITQVTQQMQIPLSYADAVIGTAGASISYIRR+SGATVTIQETRGVPGEMTVEI+G
Sbjct: 312 PAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEING 371
Query: 454 TASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYA---SMYGSPPSNPGHAGHAGG 510
TASQVQ AQQLIQNFMAEAAAP+QAQ G SADQGYN YA SMY SP SNP HA H GG
Sbjct: 372 TASQVQAAQQLIQNFMAEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHTGG 431
Query: 511 YGSVYGSNYGY 521
YG VYG+NYGY
Sbjct: 432 YGPVYGANYGY 442
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 327/413 (79%), Positives = 360/413 (87%), Gaps = 14/413 (3%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
EKKWPGWPGESVFRMLVPAQKVG IIGRKGEFIKKIVEETRAR+KILDGPPGT +RAVMI
Sbjct: 34 EKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMI 93
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
SAKEEP SS+PPA+DGLLR+HKRI+DGL+SD +HAPSG GKVSTKLLVPASQAGSLIGK
Sbjct: 94 SAKEEPGSSVPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGK 153
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
QGGTVKSIQEASNCIVRVLGAEDLP+FALQDDRVVEVVGD +GVHKA+ELI SHLRKFLV
Sbjct: 154 QGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRKFLV 213
Query: 300 DRSIIPLFEMHMQMPNP-QMDHIPPPQSWGPPQ--GLPPSGGPGYGHNPQYMPPPRQAES 356
DR +IP+FEM+MQ NP +H+PP QSWGP Q GGPG+G QYMPPPRQ +S
Sbjct: 214 DRGVIPIFEMNMQTANPHHAEHMPPHQSWGPSQGLPPNVGGGPGFGPPSQYMPPPRQLDS 273
Query: 357 YYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416
YYP A++PPP+++QPHQGISAYGR+A + VH SSN QS PS++TQ+TQQMQIPLSYADAV
Sbjct: 274 YYPSAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLSYADAV 333
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM----AEA 472
IGTAGASISYIRR+SGATVTIQE RGVPGEMTVEISGTASQVQTAQQLIQNFM A A
Sbjct: 334 IGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAAA 393
Query: 473 AAPSQAQMGA-SADQGYNPY---ASMYGSPPSNPGHAGHAGGYGSVYGSNYGY 521
AAP+Q Q +ADQGYN Y S+Y SPPSNP GHAGGYGSVYG+NYGY
Sbjct: 394 AAPAQPQTTVPAADQGYNSYPAHGSVYASPPSNP---GHAGGYGSVYGANYGY 443
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/413 (76%), Positives = 347/413 (84%), Gaps = 13/413 (3%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
+EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT ERAVM
Sbjct: 74 SEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 133
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+SAK+EP+S+ PPA+DGLLRVHKRIVDGL+ D++HAP+ G KVST+LLV ASQAGSLIG
Sbjct: 134 VSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNA-GSKVSTRLLVAASQAGSLIG 192
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
KQGGTVKSIQE SNCIVRVLG+EDLPVFALQDDRVVEV+GD +GVHKA+ELI SHLRKFL
Sbjct: 193 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 252
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGL-------PPSGGPGYGHNPQYMPPP 351
VDRSIIP+FEM+MQM NPQMD PP P G G PPP
Sbjct: 253 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 312
Query: 352 RQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
RQ ++YYPPA++ MEKQPH GISAYGREAP+ VH +SNAQS PS++TQ TQQMQIPLS
Sbjct: 313 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 372
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
+ADAVIGTAGASISYIRR+SGATVTIQETRGVPGEMTVE+SGTASQVQ AQQLIQNFMA
Sbjct: 373 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 432
Query: 472 AAAPSQAQMGASADQGYNPYA---SMYGSPPSNPGHAGHAGGYGSVYGSNYGY 521
A AP+Q Q G S DQGYN YA S+Y SPP+NP A HAGGYGSVYG+NYGY
Sbjct: 433 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANP--AAHAGGYGSVYGTNYGY 483
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 332/407 (81%), Positives = 353/407 (86%), Gaps = 19/407 (4%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT ERAVM+SAKEEP+SSLPP
Sbjct: 130 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPP 189
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
AMDGLL+VHKRIVDGL+ DSSH P G GKVST+LLV ASQAGSLIGKQGGTVKSIQEAS
Sbjct: 190 AMDGLLKVHKRIVDGLEGDSSHMPPG--GKVSTRLLVAASQAGSLIGKQGGTVKSIQEAS 247
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
NCIVRVLGAEDLP+FALQDDRVVEVVG+ GVHKA+ELI SHLRKFLVDRS+IPLFEM M
Sbjct: 248 NCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQM 307
Query: 312 QMPNPQMDHIPPPQSWGPPQGLPP--SGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEK 369
QM NP ++H PP Q WGPPQGLPP SGGPG+G NP YMPPPRQ +SYYPP +LPPP+EK
Sbjct: 308 QMSNPPIEHRPPHQPWGPPQGLPPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEK 367
Query: 370 QPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRR 429
QPHQGISAYGRE P+ H S+AQ PSMITQVTQQMQIPLSYADAVIGTAGASISYIRR
Sbjct: 368 QPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRR 427
Query: 430 SSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ------------NFMAEAAAPSQ 477
+SGATVTIQETRGVPGEMTVEI+GTASQVQ AQQLIQ NFMAEAAAP+Q
Sbjct: 428 ASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQALFLPVFDTKLLNFMAEAAAPAQ 487
Query: 478 AQMGASADQGYNPYA---SMYGSPPSNPGHAGHAGGYGSVYGSNYGY 521
AQ G SADQGYN YA SMY SP SNP HA H GGYG VYG+NYGY
Sbjct: 488 AQAGGSADQGYNSYAAHGSMYASPASNPAHASHTGGYGPVYGANYGY 534
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/436 (72%), Positives = 355/436 (81%), Gaps = 19/436 (4%)
Query: 95 EDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKK 154
E+ +PE + +K E E + VG EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKK
Sbjct: 152 EEGIPEHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKK 211
Query: 155 IVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHA 214
IVEETRARIKILDGPPGTTERAVM+S KEEPESSLPP+MDGLLRVH RIVDGLD ++S A
Sbjct: 212 IVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQA 271
Query: 215 PSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVV 274
P + KVST+LLVPASQAGSLIGKQGGTVK+IQEAS CIVRVLG+EDLPVFALQDDRVV
Sbjct: 272 PPPS--KVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVV 329
Query: 275 EVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPP-QSWGPPQGL 333
EVVG+ + VH+A+ELI SHLRKFLVDRSIIP FE MQ P QMDH+PPP QSWGPPQG
Sbjct: 330 EVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGH 389
Query: 334 PPS-GGPGYGHN-PQYMPPPRQAESYYPPADL-PPPMEKQPHQGISAYGREAPVNVHGSS 390
PS GG GYGHN P YM PP + +SYYPP ++ PPMEKQPHQGISAYGRE P+NVH SS
Sbjct: 390 APSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS 449
Query: 391 NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVE 450
+ P + QVTQQMQIPLSYADAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE
Sbjct: 450 ---APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVE 506
Query: 451 ISGTASQVQTAQQLIQNFMAEAA--APSQAQMGASADQGYNPYA---SMYGSPPSNPGHA 505
+SGT SQVQTA QLIQNFMAEA AP+Q Q A QGYNPYA S+Y + P+NP
Sbjct: 507 VSGTGSQVQTAVQLIQNFMAEAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNP--- 563
Query: 506 GHAGGYGSVYGSNYGY 521
GGY + Y S YGY
Sbjct: 564 --PGGYATDYSSGYGY 577
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/436 (72%), Positives = 355/436 (81%), Gaps = 19/436 (4%)
Query: 95 EDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKK 154
E+ +PE + +K E E + VG EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKK
Sbjct: 152 EEGIPEHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKK 211
Query: 155 IVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHA 214
IVEETRARIKILDGPPGTTERAVM+S KEEPESSLPP+MDGLLRVH RIVDGLD ++S A
Sbjct: 212 IVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQA 271
Query: 215 PSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVV 274
P + KVST+LLVPASQAGSLIGKQGGTVK+IQEAS CIVRVLG+EDLPVFALQDDRVV
Sbjct: 272 PPPS--KVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVV 329
Query: 275 EVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPP-QSWGPPQGL 333
EVVG+ + VH+A+ELI SHLRKFLVDRSIIP FE MQ P QMDH+PPP QSWGPPQG
Sbjct: 330 EVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGH 389
Query: 334 PPS-GGPGYGHN-PQYMPPPRQAESYYPPADL-PPPMEKQPHQGISAYGREAPVNVHGSS 390
PS GG GYGHN P YM PP + +SYYPP ++ PPMEKQPHQGISAYGRE P+NVH SS
Sbjct: 390 APSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS 449
Query: 391 NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVE 450
+ P + QVTQQMQIPLSYADAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE
Sbjct: 450 ---APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVE 506
Query: 451 ISGTASQVQTAQQLIQNFMAEAA--APSQAQMGASADQGYNPYA---SMYGSPPSNPGHA 505
+SGT SQVQTA QLIQNFMAEA AP+Q Q A QGYNPYA S+Y + P+NP
Sbjct: 507 VSGTGSQVQTAVQLIQNFMAEAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNP--- 563
Query: 506 GHAGGYGSVYGSNYGY 521
GGY + Y S YGY
Sbjct: 564 --PGGYATDYSSGYGY 577
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 355/580 (61%), Positives = 412/580 (71%), Gaps = 75/580 (12%)
Query: 2 AEADQGFVEHDGNHDLEQIPEN--QEVENQVPG-----YEVPE-------YEVP------ 41
AE +Q FV H+G+ Q+P EV N +P YEV + YEVP
Sbjct: 4 AEDEQNFVAHNGD----QVPAQGLDEVHNGLPYQVHQPYEVSDPILEPQQYEVPDQTLEP 59
Query: 42 ---EVPQEQV-PQE-QVPESQVTKEQVTEDQLTED--QVPEDHV---PEDQVP------- 84
E+P + + PQ+ +V + ++ +DQ ED P+D + P+DQ P
Sbjct: 60 QQYELPDQTLEPQQYEVQDQLEYQQYQLQDQTHEDVQDQPQDDLKYQPQDQEPYQLQDEA 119
Query: 85 ------------EDHVPEDQVPEDIVPED--SQLQEKQENEVNLAVGSTEKKWPGWPGES 130
+DH +D V + + E+ S+ +K E+E VG EK+WPGWPGE+
Sbjct: 120 HDQAQYQAEGEAQDHNGDD-VQDKVEDEEGISESLQKSESEEGATVGGEEKRWPGWPGET 178
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VFRMLVPAQKVGSIIGRKG+ IKKIVEETRARIKILDGPPGTTERAVM+S KEEPESSLP
Sbjct: 179 VFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLP 238
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
P+MDGLLRVH RIVDGLD + S AP + KVST+LLVPASQAGSLIGKQGGTVK+IQEA
Sbjct: 239 PSMDGLLRVHMRIVDGLDGEPSQAPPAS--KVSTRLLVPASQAGSLIGKQGGTVKAIQEA 296
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S CIVRVLG+EDLPVFALQDDRVVEVVG+ + VHKA+ELI SHLRKFLVDRSIIP FE
Sbjct: 297 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFLVDRSIIPFFENQ 356
Query: 311 MQMPNPQMDHIPPP-QSWGPPQGLPPS-GGPGYGHN-PQYMPPPRQAESYYPPADL-PPP 366
MQ P QMDH+P P Q+WGPPQG PS GG GYGHN P YM PP + +SYYPP ++ PP
Sbjct: 357 MQKPTRQMDHMPAPHQAWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPP 416
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
MEKQPHQGISAYGRE P+NVH SS + P + QVTQQMQIPLSYADAVIGT+G++ISY
Sbjct: 417 MEKQPHQGISAYGREPPMNVHVSS---APPMVAQQVTQQMQIPLSYADAVIGTSGSNISY 473
Query: 427 IRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA--APSQAQMGASA 484
RR SGATVTIQETRGVPGEMTVE+SGT SQVQTA QLIQNFMAEA AP+Q Q A
Sbjct: 474 TRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAMQLIQNFMAEAGAPAPAQPQTVAPE 533
Query: 485 DQGYNPYA---SMYGSPPSNPGHAGHAGGYGSVYGSNYGY 521
QGYNPYA S+Y + P+NP GGY + Y S YGY
Sbjct: 534 QQGYNPYATHGSVYAAAPTNP-----PGGYATDYSSGYGY 568
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/348 (78%), Positives = 303/348 (87%), Gaps = 6/348 (1%)
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
M+SAKEEP+SSLPPAMDGLLRVHKRI+DGL+ DSSHAP +G KVST+LLVPASQAGSLI
Sbjct: 1 MVSAKEEPDSSLPPAMDGLLRVHKRIIDGLEGDSSHAPPSSGAKVSTRLLVPASQAGSLI 60
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
GKQGGTVKSIQEAS CIVRVLGAEDLPVF+LQDDRVVEV+G+A GVHKA+ELI S LRKF
Sbjct: 61 GKQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLRKF 120
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLP--PSGGPGYGHNPQYMPPPRQAE 355
LVDRSIIPLFEM MQM NP M+ +PP QSWG PQ LP P GGPGYG NPQYM PPRQ +
Sbjct: 121 LVDRSIIPLFEMQMQMANPPMEQMPPHQSWGGPQSLPLNPVGGPGYGQNPQYMQPPRQHD 180
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
+YYPP+D+PPPMEKQPHQGISAYGR+ P+ H SSNAQ+ PSMITQ+TQQMQIPLSYADA
Sbjct: 181 NYYPPSDMPPPMEKQPHQGISAYGRQTPMGGHASSNAQAAPSMITQITQQMQIPLSYADA 240
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAP 475
VIGTAGASISYIRR+SGATVTIQETRGVP MTVEISGTASQVQTAQQLIQ + AP
Sbjct: 241 VIGTAGASISYIRRASGATVTIQETRGVPEAMTVEISGTASQVQTAQQLIQAIF--SGAP 298
Query: 476 SQAQMGASADQGYNPY--ASMYGSPPSNPGHAGHAGGYGSVYGSNYGY 521
+Q Q G ADQGYNPY +S+Y SPPSNP H GH GGY S+YG+++GY
Sbjct: 299 AQPQTGGPADQGYNPYSHSSVYASPPSNPEHTGHTGGYSSMYGASFGY 346
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/358 (76%), Positives = 304/358 (84%), Gaps = 8/358 (2%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
+EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT ERAVM
Sbjct: 74 SEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 133
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+SAK+EP+S+ PPA+DGLLRVHKRIVDGL+ D++HAP+ G KVST+LLV ASQAGSLIG
Sbjct: 134 VSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNA-GSKVSTRLLVAASQAGSLIG 192
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
KQGGTVKSIQE SNCIVRVLG+EDLPVFALQDDRVVEV+GD +GVHKA+ELI SHLRKFL
Sbjct: 193 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 252
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGL-------PPSGGPGYGHNPQYMPPP 351
VDRSIIP+FEM+MQM NPQMD PP P G G PPP
Sbjct: 253 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 312
Query: 352 RQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
RQ ++YYPPA++ MEKQPH GISAYGREAP+ VH +SNAQS PS++TQ TQQMQIPLS
Sbjct: 313 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 372
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ADAVIGTAGASISYIRR+SGATVTIQETRGVPGEMTVE+SGTASQVQ AQQLIQ +
Sbjct: 373 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQAII 430
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/456 (60%), Positives = 345/456 (75%), Gaps = 20/456 (4%)
Query: 81 DQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQK 140
D PE+HV E D VPED KQ +E++ + G+ KKWPGWPGE+VFRMLVP QK
Sbjct: 78 DSPPEEHVEEVHGAGD-VPEDFDSLPKQGSEID-SKGNEIKKWPGWPGENVFRMLVPVQK 135
Query: 141 VGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVH 200
VGSIIGRKGEFIKKI EET+ARIKILDGPPG +ERAVM+SAKEEP+ +PPA+DGLLRVH
Sbjct: 136 VGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDCPIPPAVDGLLRVH 195
Query: 201 KRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGA 260
K++++ +D D + + G V T+LLV +QAGSLIGKQG T+KSIQ+ S C +RVLG+
Sbjct: 196 KQVIN-VDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGS 254
Query: 261 EDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMD- 319
E+LP+FAL+DD +VE+ G+++GVHKA+ELI HLRKFLVDRSI+ +FE MQM + +++
Sbjct: 255 ENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFETQMQMSDVRVNQ 314
Query: 320 HIPPPQSWGPP-------QGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPH 372
++PP Q+WGPP G GGP + N QYMPP +SYYPP +L PPM+K H
Sbjct: 315 NLPPHQNWGPPPQGFPAPAGGGGGGGPAFAPNHQYMPPSHHYDSYYPPTEL-PPMDKHLH 373
Query: 373 QG-ISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSS 431
QG AY R+A + +H SS+AQ S++T+VTQ MQIPL+YADAVIG +G +ISYIRR+S
Sbjct: 374 QGPPPAYARDASMGIH-SSSAQPQQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRAS 432
Query: 432 GATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPY 491
GA++TIQETRGVPGEMTVEISGT+SQ+Q AQQL+QNFMAEAA+ +Q MG S QGY+ Y
Sbjct: 433 GASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFMAEAASATQDPMGGSVSQGYSAY 492
Query: 492 ---ASMYGSPPSNP-GHAGHA--GGYGSVYGSNYGY 521
A +Y PP++ GH GHA YG VYG+NYGY
Sbjct: 493 PTTAPVYAPPPTSAGGHTGHAPSADYGPVYGTNYGY 528
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/452 (60%), Positives = 340/452 (75%), Gaps = 24/452 (5%)
Query: 85 EDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSI 144
++H E + D+ E+ +EK+ E +L G KKWPGWPGE+VFRMLVP QKVGSI
Sbjct: 119 QEHAEEQNIGGDVT-ENFGSEEKRGPEEDLKGGEV-KKWPGWPGENVFRMLVPVQKVGSI 176
Query: 145 IGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIV 204
IGRKGEFI+KI E+T+ARIKILDGPPGT+ERAVM+SAKEEP+ S+PPA+DGLLRVHK++V
Sbjct: 177 IGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKEEPDCSIPPAVDGLLRVHKQVV 236
Query: 205 DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP 264
+ +D + + SG V T+LLV +QAGSLIGKQG T+KS Q+A+ C +R+LG+E LP
Sbjct: 237 N-VDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLP 295
Query: 265 VFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHI--- 321
VFAL+DD +VE+ G++SGVHKA+EL+ HLRKFLVDRSI+ +FE MQ P+ + +
Sbjct: 296 VFALRDDSIVEIQGESSGVHKAVELVAIHLRKFLVDRSIVGVFETQMQRPDVRANQNVPP 355
Query: 322 -PPPQSWGPPQ-----GLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQG- 374
PP Q WGPPQ G GGP + N QYMPP ++YYPPADL PM+K HQG
Sbjct: 356 GPPHQPWGPPQGFPAPGPGSGGGPAFPPNTQYMPPSHNYDNYYPPADL-SPMDKHLHQGP 414
Query: 375 ISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGAT 434
AY R+ + +H SS+AQ+ S VTQ MQIPLSYADAVIG +GA+ISYIRR+SGA+
Sbjct: 415 PPAYVRDVSMGIH-SSSAQAQQS----VTQHMQIPLSYADAVIGASGANISYIRRASGAS 469
Query: 435 VTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYAS- 493
+TIQETRGVPGEMTVEISGTASQ+Q AQQL+QNFMAEAA+ +Q MG S +QGYN Y +
Sbjct: 470 ITIQETRGVPGEMTVEISGTASQIQAAQQLVQNFMAEAASAAQDHMGGSINQGYNSYPTN 529
Query: 494 -MYGSPPSN-PGHAGHA--GGYGSVYGSNYGY 521
+Y SPPS+ GHAGHA YGSVYG+NYGY
Sbjct: 530 PVYASPPSSAAGHAGHAPSADYGSVYGTNYGY 561
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/434 (60%), Positives = 317/434 (73%), Gaps = 15/434 (3%)
Query: 98 VPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVE 157
+ + L +K+ + + G T+KKWPGWPG++VFR+LVP Q VG IIGRKGEF+KK+ E
Sbjct: 53 MARSTNLSQKRGRDDEIGAGLTDKKWPGWPGDNVFRLLVPTQMVGGIIGRKGEFVKKMCE 112
Query: 158 ETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDG---LDSDSSHA 214
ETR+RIKIL+G GT ER VM+SAKEEPE+ + PAMDG+LRVHKRI++G + A
Sbjct: 113 ETRSRIKILEGLRGTPERTVMVSAKEEPEAPVSPAMDGILRVHKRIIEGGPDGRGELGRA 172
Query: 215 PSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVV 274
G G +ST+LLV +QAGSLIG+QG T+K+IQE S IVRVL AEDLP AL DDR+V
Sbjct: 173 QQGGSGTISTRLLVAGTQAGSLIGRQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLV 232
Query: 275 EVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPN-PQMDHIPPPQSWGPPQ-- 331
EV G+A VHKA+ELI SHLRKFLVDRS++PLFE + N PQ++ P QSWG Q
Sbjct: 233 EVQGEAGSVHKAVELIVSHLRKFLVDRSVLPLFEADRTIGNQPQIEENLPHQSWGHNQSS 292
Query: 332 GLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSN 391
+P SGG G G N QYM Q ++YYPP+DL P+E Q H G+S YGR+ + H +N
Sbjct: 293 SVPSSGGAGLG-NTQYMSSAFQHDNYYPPSDL--PLESQGHHGLSVYGRDPSLAGHSVAN 349
Query: 392 AQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEI 451
P +ITQVTQ MQIPLSYADA+IGTAGA+ISY+RR+SGAT+ +QETRGVPGEMTVEI
Sbjct: 350 PPPAP-VITQVTQHMQIPLSYADAIIGTAGANISYMRRNSGATIAVQETRGVPGEMTVEI 408
Query: 452 SGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPY---ASMYGSPPSNPGHAGHA 508
GTA+QVQTAQQLIQNFMA A+ P A +S D GYN Y SMY SP N GHAGH+
Sbjct: 409 RGTATQVQTAQQLIQNFMAGASGPP-ANTYSSVDSGYNSYPTQNSMYSSPQPNTGHAGHS 467
Query: 509 -GGYGSVYGSNYGY 521
GGY S Y SNYGY
Sbjct: 468 TGGYVSHYNSNYGY 481
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/452 (58%), Positives = 336/452 (74%), Gaps = 20/452 (4%)
Query: 85 EDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSI 144
E+HV E D VPED KQE+E++ + G+ KKWPGWPGE+VFRMLVP QKVGSI
Sbjct: 83 EEHVEEGHGAGD-VPEDFDSLLKQESEID-SKGNEIKKWPGWPGENVFRMLVPVQKVGSI 140
Query: 145 IGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIV 204
IGRKGEFIKKI EET+ARIKILDGPPG +ERAVM+SAKEEP+ +PPA+DGLLRVHK+++
Sbjct: 141 IGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRPIPPAIDGLLRVHKQVI 200
Query: 205 DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP 264
+ +D D + G V T+LLV +QAGSLIGKQG T+KSIQ+ S C +RVLG+E+LP
Sbjct: 201 N-VDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLP 259
Query: 265 VFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMD-HIPP 323
VFAL+DD +VE+ G+++GVHKA+ELI HLRKFLVDRSI+ +FE MQ P+ +++ ++PP
Sbjct: 260 VFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFETQMQRPDVRVNQNVPP 319
Query: 324 PQSWGPP------QGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQG-IS 376
Q+WGPP GGP + N QYMPP +SYYPP +L PPM+K HQG
Sbjct: 320 HQNWGPPPQGFPAPAGGGGGGPAFAPNHQYMPPSHHYDSYYPPTEL-PPMDKHLHQGPPP 378
Query: 377 AYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVT 436
AY ++A + +H SS+A S++T+VTQ MQIPL+YADAVIG +G +ISYIRR+SGA++T
Sbjct: 379 AYAKDASMGIH-SSSAPPQQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASIT 437
Query: 437 IQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPY---AS 493
IQETRGVPGEMTVEISGT+SQ+Q AQQL+QNFMAEAA+ +Q MG S QGY+ Y A
Sbjct: 438 IQETRGVPGEMTVEISGTSSQIQAAQQLVQNFMAEAASATQDPMGGSVSQGYSAYPTTAP 497
Query: 494 MYGSPPSNPGHAGH----AGGYGSVYGSNYGY 521
+Y P S G + YG +YG+NYGY
Sbjct: 498 VYAPPTSAGGGGHTGHAPSADYGPLYGTNYGY 529
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/412 (61%), Positives = 312/412 (75%), Gaps = 20/412 (4%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
+KWPGWPGE+VFRML+P QKVG IIGRKGE IKK+ EET+ARIKILDGPPGT+ERAVM+S
Sbjct: 31 EKWPGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVS 90
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQ 240
AKEEP++ + PA+DGLLRVHK I+D ++SD PS G VST+LLV A+QAGSLIGKQ
Sbjct: 91 AKEEPDAPIAPAIDGLLRVHKCIMD-VESD---VPSAAGVMVSTRLLVVAAQAGSLIGKQ 146
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
G T+KSIQEASNCIVRVLG E+LP+FALQ+D VVE+ G+ + VHKA+ELI S+LRKFLVD
Sbjct: 147 GATIKSIQEASNCIVRVLG-ENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVD 205
Query: 301 RSIIPLFEMHMQMPNPQ-MDHIPPPQSWGPPQGLPPSGG--PGYGHNPQYMPPPRQAESY 357
RS+I +FEM MQ PN Q +++PP QSW P Q P + G PG+ N QYM PP Q ++Y
Sbjct: 206 RSVIKVFEMEMQKPNTQGNENMPPQQSWDPSQVFPINTGGEPGFVPNLQYMQPPYQLDNY 265
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTP--SMITQVTQQMQIPLSYADA 415
YPP P + HQG YGRE G S+ TP S++ ++TQ MQ+PLSYADA
Sbjct: 266 YPPPAQTPLDQHHHHQG-PPYGRETGA---GVSSPSLTPQQSIVNKITQYMQVPLSYADA 321
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAP 475
VIG +G +ISY+RR+SGAT+ I+ET+GVPGEMTVEI+G+ SQVQTAQQLIQNFMAEAA+
Sbjct: 322 VIGASGVNISYVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTAQQLIQNFMAEAASS 381
Query: 476 SQAQMGASADQGYNPY---ASMYGSPPSNP-GHAG--HAGGYGSVYGSNYGY 521
+ G + QGYNP+ ++ S PSN H G G YGSVYGS+ GY
Sbjct: 382 TLNLAGGAISQGYNPFPTHGAVSTSQPSNVIEHLGPSAGGSYGSVYGSHSGY 433
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/440 (58%), Positives = 307/440 (69%), Gaps = 23/440 (5%)
Query: 100 EDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 159
E++ + + + NL V + +K+WPGWPG+SVFR+LVP KVG+IIGRKGEFIK++ EE+
Sbjct: 84 EENAFNGEVKQQDNLQVEANDKRWPGWPGDSVFRILVPVHKVGAIIGRKGEFIKRMCEES 143
Query: 160 RARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG 219
+ARIKILDGPPG ERAVMISAK+EP+ + PAMDGLLR+HKRI DG D + GTG
Sbjct: 144 KARIKILDGPPGVPERAVMISAKDEPDEQISPAMDGLLRIHKRIADGSDGEFGQTQRGTG 203
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGD 279
T+LLVPASQAGSLIGKQG T+KSIQ++S +VR++ E++P AL DDRVVE+ G+
Sbjct: 204 TMGPTRLLVPASQAGSLIGKQGATIKSIQDSSKAVVRIV--ENVPPVALNDDRVVEIQGE 261
Query: 280 ASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPN-PQMDHIPP-----PQSWGPPQGL 333
V KA+ELI SHLRKFLVD S++PLFE M+M + P+ +P P P
Sbjct: 262 PLSVQKAVELIASHLRKFLVDHSVLPLFEQQMKMHSMPREQPMPAPQQWGPPQPWGPPPN 321
Query: 334 PPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQ 393
P GGPGY NPQ+M PPR ++YYPP D+ PPMEKQPH GISAYGREAP V S N Q
Sbjct: 322 HPPGGPGYAGNPQFM-PPRPQDNYYPPPDV-PPMEKQPHYGISAYGREAPSGVSASGN-Q 378
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
+ +QVT MQIPLSYADAVIG AGASISYIRR SGA VTIQE+RG PGEM VEI G
Sbjct: 379 PPSHVASQVTHNMQIPLSYADAVIGAAGASISYIRRHSGAAVTIQESRGAPGEMNVEIIG 438
Query: 454 TASQVQTAQQLIQNFMAEAA-----APSQAQMGASADQGYN-----PYASMYGSPPSNPG 503
+ASQVQTAQQLIQNFMAEAA P+ D Y PY + YGSPP+ G
Sbjct: 439 SASQVQTAQQLIQNFMAEAAPQGRPPPASNPPAPPVDPSYGSYPPAPYGASYGSPPTGAG 498
Query: 504 HAGH--AGGYGSVYGSNYGY 521
A H G G Y NYGY
Sbjct: 499 PAPHNGGGYGGGSYHPNYGY 518
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/422 (58%), Positives = 305/422 (72%), Gaps = 23/422 (5%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTER 175
V + + KWPGWPGESVFR+LV QKVG++IGRKGEFIK++ +E++ARIKILDGPPG ER
Sbjct: 106 VVAEDTKWPGWPGESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPER 165
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
AVMISAK+EP++ +PPA+D LLRVH RI DGLDS++ A G T+LLVPASQAGS
Sbjct: 166 AVMISAKDEPDALVPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGS 225
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGKQG T+KSIQ+AS C +R+L E++P AL DDRVVE+ G+ VHKA+ELI +HLR
Sbjct: 226 LIGKQGTTIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLR 283
Query: 296 KFLVDRSIIPLFEMHMQM-------PNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYM 348
KFLVDRS++PLFEM M++ P P PP W P +PPS GPGYG NP +M
Sbjct: 284 KFLVDRSVLPLFEMQMKVHSAPREQPMPAPQQWGPPPPWSHPPNIPPS-GPGYGGNPHFM 342
Query: 349 PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQI 408
PPR +SYYPP ++ +EKQPH GIS+YGR+A +S Q +Q++Q+MQ+
Sbjct: 343 -PPRPQDSYYPPPNV-HHVEKQPHYGISSYGRDANPTAAPTSGNQHLSHGSSQLSQKMQV 400
Query: 409 PLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF 468
PLSYADAVIG+AGA+ISYIR+ SGAT++IQE GVPGEMTVEI+G+ASQVQTAQQLI+NF
Sbjct: 401 PLSYADAVIGSAGANISYIRKHSGATISIQE--GVPGEMTVEIAGSASQVQTAQQLIKNF 458
Query: 469 MAEAA----APSQAQMGASADQGYNPYASM----YGSPPSNPGHAGH-AGGYGSVYGSNY 519
MAEA+ P A D GYN YA Y +PP G H GGYG+ Y NY
Sbjct: 459 MAEASPQVPPPGPAPPSQPVDSGYNSYAPYGGPSYATPPGGAGPTPHNGGGYGAHYPPNY 518
Query: 520 GY 521
GY
Sbjct: 519 GY 520
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/479 (51%), Positives = 312/479 (65%), Gaps = 60/479 (12%)
Query: 98 VPEDSQLQEKQENEVNLAVGS-TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIV 156
+P ++ +K+ E + G+ EKKWPGWPGE+VFRMLVP+QKVG IIGRKGEF+KK+
Sbjct: 17 IPRNANPGQKRGREEEIGTGTGAEKKWPGWPGENVFRMLVPSQKVGGIIGRKGEFVKKMC 76
Query: 157 EETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS 216
EETR+RIKILDG GT ER VM+SAKEEP++++ PAMDG+L+VHKRI++G+D +
Sbjct: 77 EETRSRIKILDGLSGTPERVVMVSAKEEPDATISPAMDGILKVHKRIIEGID-EVGRTQQ 135
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
GG T+LL+ Q+GSLIGKQG T+KSIQE S +V+G+ED+P AL DD+V+E+
Sbjct: 136 AAGGPTITRLLLAGIQSGSLIGKQGATIKSIQENSGVAAKVVGSEDIPYCALADDKVLEI 195
Query: 277 VGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPN-PQMDHIPPPQSWGPPQGLP- 334
G+ + VHKA+EL+ SHLRKFLVDRS++P++EM+M N QM+ Q W Q
Sbjct: 196 QGEPANVHKALELVVSHLRKFLVDRSVLPMYEMNMSKTNQSQMEQNLSHQPWSHNQTSSL 255
Query: 335 PSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQS 394
P+ G G+G+N +Y P ++YY P+DLPP E H G++ YGR+ P+ H NA
Sbjct: 256 PNSGSGFGNNSKYTPTAPPHDNYYAPSDLPP--ETHSHHGLNMYGRD-PLGGHSVPNAAP 312
Query: 395 TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
P +ITQV+Q+MQIPLSYADAVIGT GA+ISY RR+SGA +TI+ETRGVPGEMTVEI GT
Sbjct: 313 AP-VITQVSQRMQIPLSYADAVIGTNGANISYCRRNSGAIITIEETRGVPGEMTVEIHGT 371
Query: 455 ASQVQTAQQLIQNFMAEAAAPSQAQMGASA------------------------------ 484
ASQVQTAQQLIQNFMA A+ P AS
Sbjct: 372 ASQVQTAQQLIQNFMAGASGPPADVYRASGPPADVYRTSGPPADVYRASGPPADVYRASG 431
Query: 485 ------------------DQGYNPYA---SMYGSPPSNPGHAGH-AGGYGSVYGSNYGY 521
D GYN Y+ +MY SP SN G AGH AGGY S Y ++Y Y
Sbjct: 432 PPADVYRASGPPDVYNSIDSGYNSYSGHNTMYTSPRSNTGFAGHSAGGYESNYNNSYRY 490
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 266/451 (58%), Positives = 311/451 (68%), Gaps = 33/451 (7%)
Query: 99 PEDSQLQEKQENEV--------NLAVGSTE-KKWPGWPGESVFRMLVPAQKVGSIIGRKG 149
P DS QE+QEN NL V + + KWPGWPGESVFR+LVPAQKVG+IIGRKG
Sbjct: 192 PADS-YQEEQENAFSGGINQQDNLQVNNVDDNKWPGWPGESVFRILVPAQKVGAIIGRKG 250
Query: 150 EFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
EFIKK+ EET+ARIKILDGPPG ERAVMISAK+EP++ L PAMDGLLRVHKRI D D
Sbjct: 251 EFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSPAMDGLLRVHKRITDSSDG 310
Query: 210 DSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQ 269
+SS G T+LLVP+SQAGSLIGKQG T+KSIQ++S IVR++ E++P AL
Sbjct: 311 ESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSIVRIV--ENVPPVALN 368
Query: 270 DDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPN-PQMDHIPPPQSWG 328
DDRVVE+ G+ GV +A+ELI SHLRKFLVDRS++PLFE HM+M P+ +PPPQ WG
Sbjct: 369 DDRVVEIQGEPLGVQEAVELISSHLRKFLVDRSVLPLFEAHMKMHGMPREQPVPPPQHWG 428
Query: 329 PPQGL-----PPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAP 383
PPQ P GGPG+G NPQ+M PR +SYYP D+ P MEKQPH GISAYGREAP
Sbjct: 429 PPQTWIRPPNIPPGGPGFGGNPQFM-HPRPQDSYYPSPDV-PHMEKQPHYGISAYGREAP 486
Query: 384 VNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGV 443
+ ++ Q +QV M IPL+YADAVIG AGASISYIRR SGATVTIQE+RG
Sbjct: 487 PSGASATGNQPPSHAGSQVAHDMHIPLAYADAVIGAAGASISYIRRHSGATVTIQESRGA 546
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFM------AEAAAPSQAQMGASADQGYNPYASMYGS 497
PGEMTVEI+GTA+QVQTAQQLIQNFM AP+ D Y Y YG+
Sbjct: 547 PGEMTVEITGTAAQVQTAQQLIQNFMAEAAPPPPGPAPASNPPAPPVDPSYGSYPPPYGA 606
Query: 498 PPSNPGHAG------HAGGYGS-VYGSNYGY 521
PS A + G YG Y +YGY
Sbjct: 607 APSYGSSAAAGPPQYNGGNYGGPTYPPSYGY 637
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 279/534 (52%), Positives = 341/534 (63%), Gaps = 45/534 (8%)
Query: 7 GFVEHDGNHDLEQIPENQEVENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTKEQVTED 66
G VE+ DL ++P+N E Q+ Y + E P + V E +QV+
Sbjct: 3 GLVENFDADDLGEMPQNHYNEEQLIPYSDVSHPYNEEPDNM---DNVEEGNPYIQQVS-- 57
Query: 67 QLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGW 126
L ++ PE+Q E+ P + E++ D+ + + + +L V +KKWPGW
Sbjct: 58 -LYSEE------PENQYNEE--PSNPYQEEL---DNAYNGEVKQQDSLPV-EADKKWPGW 104
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
PGESVFR+L+PAQKVG+IIGRKGEFIKK+ EE++ARIKILDGPPG ER VMISAK+EP+
Sbjct: 105 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPD 164
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ + PAMDGL RV+KRI DG D DS T+LLVPASQAGSLIGKQG T+KS
Sbjct: 165 APISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKS 224
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
IQ++S IVR++ E LP+ AL DDRVVE+ G+ GV KA+E I SHLRKFLVDRS++PL
Sbjct: 225 IQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPL 282
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGH----------NPQYMPPPRQAES 356
FE M+M N Q + + P G P GP H +PQ+M PPR ++
Sbjct: 283 FEGQMKMHNAQREQA---MAAPQPWGPPQPWGPPPSHLPPGGPGYGGHPQFM-PPRPQDN 338
Query: 357 YYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416
YYPP D+ P MEKQPH GISAYGREAP V S N Q + +QVT MQIPLSYADAV
Sbjct: 339 YYPPPDV-PSMEKQPHYGISAYGREAPTGVSASGN-QPPSHVASQVTHNMQIPLSYADAV 396
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEA---- 472
IG AGASISYIRR SGATVTIQE+RG PGEMTVEI G+ASQVQTAQQL+QNFMAEA
Sbjct: 397 IGAAGASISYIRRHSGATVTIQESRGAPGEMTVEIIGSASQVQTAQQLVQNFMAEAPQGP 456
Query: 473 AAPSQAQMGASADQGYN----PYASMYGSPPSNPGHAGHAGG-YGSVYGSNYGY 521
P+ + D Y PY + YGS S G A H GG YG +YGY
Sbjct: 457 PPPASNPPAPAVDPSYGSYPPPYGASYGSAASGAGPAPHNGGSYGGTTYPSYGY 510
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 267/459 (58%), Positives = 313/459 (68%), Gaps = 38/459 (8%)
Query: 91 DQVPEDIVPEDSQLQEKQENEV--------NLAVGSTEKK-WPGWPGESVFRMLVPAQKV 141
+Q ED P DS QE+ EN NL V + + WPGWPGESVFR+LVPAQKV
Sbjct: 76 NQYNED--PADS-YQEEHENAFSGGINQQGNLQVNNVDDNIWPGWPGESVFRILVPAQKV 132
Query: 142 GSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHK 201
G+IIGRKGEFIKK+ EET+ARIKILDGPPG ERAVMISAK+EP++ L PAMDGLLRVHK
Sbjct: 133 GAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSPAMDGLLRVHK 192
Query: 202 RIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE 261
RI D D +SS G T+LLVP+SQAGSLIGKQG T+KSIQ++S IVR++ E
Sbjct: 193 RITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSIVRIV--E 250
Query: 262 DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPN-PQMDH 320
++P AL DDRVVE+ G+ GV KA+ELI SHLRKFLVDRS++PLFE HM+M P+
Sbjct: 251 NVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRKFLVDRSVLPLFEAHMKMHGMPREQP 310
Query: 321 IPPPQSWGPPQGL-----PPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGI 375
+PPPQ WGPPQ P GGPG+G NPQ+M PPR +SYYPP D+ EKQPH GI
Sbjct: 311 VPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFM-PPRPQDSYYPPPDV----EKQPHYGI 365
Query: 376 SAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATV 435
SAYGREAP + ++ Q +QV M IPL+YADAVIG AGASISYIRR SGATV
Sbjct: 366 SAYGREAPPSGASATGNQPPSHAGSQVAHDMHIPLAYADAVIGAAGASISYIRRHSGATV 425
Query: 436 TIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM------AEAAAPSQAQMGASADQGYN 489
TIQE+RG PG+MTVEI+GTA+QVQTAQQLIQNFM A P+ D Y
Sbjct: 426 TIQESRGAPGDMTVEITGTAAQVQTAQQLIQNFMAEAAPPAPGPPPASNPPAPPVDPSYG 485
Query: 490 PYASMYGSPPSNPGHAG------HAGGYGS-VYGSNYGY 521
Y YG+ PS A + G YG Y +YGY
Sbjct: 486 SYPPPYGAAPSYGSSAAAGPPQYNGGSYGGPTYPPSYGY 524
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 276/508 (54%), Positives = 328/508 (64%), Gaps = 40/508 (7%)
Query: 42 EVPQEQVPQEQ-VPESQVTKEQVTEDQLTEDQVPEDHVPEDQVP-EDHVPEDQVPEDIVP 99
E+PQ +EQ +P S V+ E+ D V E + QV PE+Q E+
Sbjct: 17 EMPQNHYNEEQLIPYSDVSHP-YNEEPDNMDNVEEGNPYIQQVSLYSEEPENQYNEE--- 72
Query: 100 EDSQLQEKQENEVNLAVG-------STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
+ QE+ +N N V +KKWPGWPGESVFR+L+PAQKVG+IIGRKGEFI
Sbjct: 73 PSNPYQEESDNAYNGEVKQQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFI 132
Query: 153 KKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSS 212
KK+ EE++ARIKILDGPPG ER VMISAK+EP++ + PAMDGL RV+KRI DG D DS
Sbjct: 133 KKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGLFRVYKRITDGSDGDSG 192
Query: 213 HAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDR 272
T+LLVPASQAGSLIGKQG T+KSIQ++S IVR++ E LP+ AL DDR
Sbjct: 193 QPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDR 250
Query: 273 VVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQG 332
VVE+ G+ GV KA+E I SHLRKFLVDRS++PLFE M+M N Q + + P G
Sbjct: 251 VVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFEGQMKMHNAQREQA---MAAPQPWG 307
Query: 333 LPPSGGPGYGH----------NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREA 382
P GP H +PQ+M PPR ++YYPP D+ P MEKQPH GISAYGREA
Sbjct: 308 PPQPWGPPPSHLPPGGPGYGGHPQFM-PPRPQDNYYPPPDV-PSMEKQPHYGISAYGREA 365
Query: 383 PVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRG 442
P V S N Q + +QVT MQIPLSYADAVIG AGASISYIRR SGATVTIQE+RG
Sbjct: 366 PTGVSASGN-QPPSHVASQVTHNMQIPLSYADAVIGAAGASISYIRRHSGATVTIQESRG 424
Query: 443 VPGEMTVEISGTASQVQTAQQLIQNFMAEA----AAPSQAQMGASADQGYN----PYASM 494
PGEMTVEI G+ASQVQTAQQL+QNFMAEA P+ + D Y PY +
Sbjct: 425 APGEMTVEIIGSASQVQTAQQLVQNFMAEAPQGPPPPASNPPAPAVDLSYGSYPPPYGAS 484
Query: 495 YGSPPSNPGHAGHAGG-YGSVYGSNYGY 521
YGS S G A H GG YG +YGY
Sbjct: 485 YGSAASGAGPAPHNGGSYGGTTYPSYGY 512
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/367 (64%), Positives = 282/367 (76%), Gaps = 13/367 (3%)
Query: 113 NLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+L V +K+WPGWPG+SVFR+LVPAQKVG+IIGRKGEFIKK+ E+++ARIKILDGPPG
Sbjct: 97 SLQVEGEDKRWPGWPGDSVFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGV 156
Query: 173 TERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQ 232
TERAV+ISAK+EP+ + PAMDGLLR+HKRI DG D + G T+LLVPASQ
Sbjct: 157 TERAVIISAKDEPDEPISPAMDGLLRIHKRITDGSDGEFGQPQRGASNVGPTRLLVPASQ 216
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
AGSLIGKQG T+KSIQ++S +VR++ E++P AL DDRVVE+ G+ GVHKA+ELI +
Sbjct: 217 AGSLIGKQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVHKAVELIAN 274
Query: 293 HLRKFLVDRSIIPLFEMHMQMPNPQMDH-IPPPQSWGPPQ-----GLPPSGGPGYGHNPQ 346
HLRKFLVD S++PLFE M+M + Q + + PQ W P Q P GPGYG NPQ
Sbjct: 275 HLRKFLVDHSVLPLFEQQMKMHSVQREQPMTAPQHWTPTQPWLPPPNLPPVGPGYGGNPQ 334
Query: 347 YMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
+M PPR ++YYP D+ PPMEKQPH GISAYGREAP + G+S Q + +QV M
Sbjct: 335 FM-PPRPQDNYYPRPDV-PPMEKQPHYGISAYGREAPPS--GTSGNQPPLHVASQV-HNM 389
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
QIPLSYADAVIG AGASISYIRR SGA VTIQE+RG PGEMTVEI G+ASQVQTAQQLIQ
Sbjct: 390 QIPLSYADAVIGAAGASISYIRRQSGAAVTIQESRGAPGEMTVEIIGSASQVQTAQQLIQ 449
Query: 467 NFMAEAA 473
NFMAEAA
Sbjct: 450 NFMAEAA 456
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 276/508 (54%), Positives = 328/508 (64%), Gaps = 40/508 (7%)
Query: 42 EVPQEQVPQEQ-VPESQVTKEQVTEDQLTEDQVPEDHVPEDQVP-EDHVPEDQVPEDIVP 99
E+PQ +EQ +P S V+ E+ D V E + QV PE+Q E+
Sbjct: 15 EMPQNHYNEEQLIPYSDVS-HPYNEEPDNMDNVEEGNPYIQQVSLYSEEPENQYNEE--- 70
Query: 100 EDSQLQEKQENEVNLAVG-------STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
+ QE+ +N N V +KKWPGWPGESVFR+L+PAQKVG+IIGRKGEFI
Sbjct: 71 PSNPYQEESDNAYNGEVKQQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFI 130
Query: 153 KKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSS 212
KK+ EE++ARIKILDGPPG ER VMISAK+EP++ + PAMDGL RV+KRI DG D DS
Sbjct: 131 KKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGLFRVYKRITDGSDGDSG 190
Query: 213 HAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDR 272
T+LLVPASQAGSLIGKQG T+KSIQ++S IVR++ E LP+ AL DDR
Sbjct: 191 QPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDR 248
Query: 273 VVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQG 332
VVE+ G+ GV KA+E I SHLRKFLVDRS++PLFE M+M N Q + + P G
Sbjct: 249 VVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFEGQMKMHNAQREQA---MAAPQPWG 305
Query: 333 LPPSGGPGYGH----------NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREA 382
P GP H +PQ+M PPR ++YYPP D+ P MEKQPH GISAYGREA
Sbjct: 306 PPQPWGPPPSHLPPGGPGYGGHPQFM-PPRPQDNYYPPPDV-PSMEKQPHYGISAYGREA 363
Query: 383 PVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRG 442
P V S N Q + +QVT MQIPLSYADAVIG AGASISYIRR SGATVTIQE+RG
Sbjct: 364 PTGVSASGN-QPPSHVASQVTHNMQIPLSYADAVIGAAGASISYIRRHSGATVTIQESRG 422
Query: 443 VPGEMTVEISGTASQVQTAQQLIQNFMAEA----AAPSQAQMGASADQGYN----PYASM 494
PGEMTVEI G+ASQVQTAQQL+QNFMAEA P+ + D Y PY +
Sbjct: 423 APGEMTVEIIGSASQVQTAQQLVQNFMAEAPQGPPPPASNPPAPAVDLSYGSYPPPYGAS 482
Query: 495 YGSPPSNPGHAGHAGG-YGSVYGSNYGY 521
YGS S G A H GG YG +YGY
Sbjct: 483 YGSAASGAGPAPHNGGSYGGTTYPSYGY 510
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 250/426 (58%), Positives = 299/426 (70%), Gaps = 40/426 (9%)
Query: 106 EKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 165
E+Q N V + EKKWPGWPGESVFR+LVPAQKVG++IGRKGEFIKK+ EE+RARIK+
Sbjct: 96 EQQANAV-----TDEKKWPGWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKV 150
Query: 166 LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTK 225
LDGPPG +RAVMISAK+EP++ LPPA+DGLLRVHKRI DGLD +S G T+
Sbjct: 151 LDGPPGVPDRAVMISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTR 210
Query: 226 LLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHK 285
LLVPASQAGSLIGKQG T+KSIQ+AS C++R+L E +P AL DDRVVE+ G+ VHK
Sbjct: 211 LLVPASQAGSLIGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHK 268
Query: 286 AMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN- 344
A+ELI SHLRKFLVDRS++PLFEM M++ N + Q PPQ P G+ N
Sbjct: 269 AVELIASHLRKFLVDRSVLPLFEMQMKVHNAHRE-----QPMPPPQTWGPPPPWGHPSNV 323
Query: 345 ----------PQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREA-PVNVHGSSNAQ 393
PQ+MPP + + +Y P PP+EKQPH GIS+YGR+A P +S Q
Sbjct: 324 PPGGPGYGGNPQFMPP--RPQDHYYPPPDVPPVEKQPHYGISSYGRDAPPTGAPPASGNQ 381
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
P +Q+T MQ+PLSYADAVIG AGASISYIRR SGAT++IQE GVPGEMTVEISG
Sbjct: 382 HPPHGSSQITHSMQVPLSYADAVIGAAGASISYIRRHSGATISIQE--GVPGEMTVEISG 439
Query: 454 TASQVQTAQQLIQNFMAEAA----APSQAQMGASADQGYNPY----ASMYGSPPSNPGHA 505
+ASQVQTAQQLI+NFMAEA+ + A D GY+ Y + YGSP PG A
Sbjct: 440 SASQVQTAQQLIKNFMAEASPQGPPQAPAPPAQPVDTGYSSYPPYGGTSYGSP---PGGA 496
Query: 506 G-HAGG 510
G H GG
Sbjct: 497 GPHNGG 502
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/362 (59%), Positives = 264/362 (72%), Gaps = 11/362 (3%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTER 175
V + +KKWPGWPGESVFR+LVP QKVG++IGRKGEFIKK+ EE+RARIKILDGPPG ER
Sbjct: 112 VETEDKKWPGWPGESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPER 171
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
AVMISAK+EP++ + PA+DGLLRVHKRI DGLDS++ G G T+LLVPASQAGS
Sbjct: 172 AVMISAKDEPDALVSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGS 231
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGKQG T+KSIQ+AS C +R+L E++P AL DDRVVE+ G+ VHKA+ELI SHLR
Sbjct: 232 LIGKQGATIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHLR 289
Query: 296 KFLVDRSIIPLFEMHMQMPN-----PQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPP 350
KFLVDRS++PLFE M++ N P P + P
Sbjct: 290 KFLVDRSVLPLFEAQMKVHNVPREQPMPAPQPWGPPPQWSHPPNIPPPGPGYGGNPHFMP 349
Query: 351 PRQAESYYPPADLPPPMEKQPHQGISAYGREA-PVNVHGSSNAQSTPSMITQVTQQMQIP 409
PR ++YYPP D+ P+EKQP GIS+YGR+A P S Q P +Q+TQ +Q+P
Sbjct: 350 PRPQDNYYPPPDV-HPVEKQPQYGISSYGRDAPPSGAPPVSGNQHLPPGSSQITQTLQVP 408
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
LSYADAVIG AGASISYIR+ SGAT++IQE GVPGEM +E++G+ASQVQTAQQLI+NFM
Sbjct: 409 LSYADAVIGAAGASISYIRKHSGATISIQE--GVPGEMNLEMTGSASQVQTAQQLIKNFM 466
Query: 470 AE 471
AE
Sbjct: 467 AE 468
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 245/420 (58%), Positives = 298/420 (70%), Gaps = 26/420 (6%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
+KKWPGWPGESVFR+LVP KVG++IGRKG+FIKK+ EE+RARIK+L+GPP ERAVMI
Sbjct: 97 DKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMI 156
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
SAK+EP++ LPPA+DGLLRVH+RI DGL++++ T T+LLVPASQAGSLIGK
Sbjct: 157 SAKDEPDTELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGK 216
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
QG T+KSIQ+AS C++R++ E++P AL DDRVVE+ G+ HKA+ELI SHLRKFLV
Sbjct: 217 QGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLV 274
Query: 300 DRSIIPLFEMHMQMPNPQMDH---------IPPPQSWGPPQGLPPSGGPGYGHNPQYMPP 350
DRS++PLFE ++ N + PPP WG P P GGPGY NP YMPP
Sbjct: 275 DRSVLPLFETQIKAHNMHREQPMPPPQAWGPPPPSPWGHPPPNLPPGGPGYVGNPHYMPP 334
Query: 351 PRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
Q Y PP+EKQPH GIS+YGR+AP + + Q+ S +QVT MQ+PL
Sbjct: 335 RPQENYYP--PPDVPPVEKQPHYGISSYGRDAPPSAPPGNQNQAHGS--SQVTHSMQVPL 390
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
SYADAVIG AGASISYIRR SGAT++IQE G PGEMTVEI+G+ASQVQTAQQLI+NFMA
Sbjct: 391 SYADAVIGAAGASISYIRRHSGATISIQE--GAPGEMTVEITGSASQVQTAQQLIKNFMA 448
Query: 471 EAA---APSQAQMGASADQGYNPY----ASMYGSPPSNPGHAGHAGG-YGSV-YGSNYGY 521
EA+ P+ G D GY Y + YGSPP P A H GG YG+ Y S+YGY
Sbjct: 449 EASPQGPPAPGPHGQPVDTGYGSYPPYGGASYGSPPGAPAPAPHNGGSYGAAPYSSSYGY 508
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/384 (59%), Positives = 278/384 (72%), Gaps = 20/384 (5%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
+KKWPGWPGESVFR+LVP KVG++IGRKG+FIKK+ EE+RARIK+L+GPP ERAVMI
Sbjct: 97 DKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMI 156
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
SAK+EP++ LPPA+DGLLRVH+RI DGL++++ T T+LLVPASQAGSLIGK
Sbjct: 157 SAKDEPDTELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGK 216
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
QG T+KSIQ+AS C++R++ E++P AL DDRVVE+ G+ HKA+ELI SHLRKFLV
Sbjct: 217 QGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLV 274
Query: 300 DRSIIPLFEMHMQMPNPQMDH---------IPPPQSWGPPQGLPPSGGPGYGHNPQYMPP 350
DRS++PLFE ++ N + PPP WG P P GGPGY NP YMPP
Sbjct: 275 DRSVLPLFETQIKAHNMHREQPMPPPQAWGPPPPSPWGHPPPNLPPGGPGYVGNPHYMPP 334
Query: 351 PRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
Q Y PP+EKQPH GIS+YGR+AP + + Q+ S +QVT MQ+PL
Sbjct: 335 RPQENYYP--PPDVPPVEKQPHYGISSYGRDAPPSAPPGNQNQAHGS--SQVTHSMQVPL 390
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
SYADAVIG AGASISYIRR SGAT++IQE G PGEMTVEI+G+ASQVQTAQQLI+NFMA
Sbjct: 391 SYADAVIGAAGASISYIRRHSGATISIQE--GAPGEMTVEITGSASQVQTAQQLIKNFMA 448
Query: 471 EAA---APSQAQMGASADQGYNPY 491
EA+ P+ G D GY Y
Sbjct: 449 EASPQGPPAPGPHGQPVDTGYGSY 472
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/417 (57%), Positives = 291/417 (69%), Gaps = 29/417 (6%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
+KKWPGWPGESVFR+LVP KVG++IGRKG+FIKK+ EE+RARIK+L+GPP ERAVMI
Sbjct: 97 DKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMI 156
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
SAK+EP++ LPPA+DGLLRVH+RI DGL++++ T T+LLVPASQAGSLIGK
Sbjct: 157 SAKDEPDTELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGK 216
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
QG T+KSIQ+AS C++R++ E++P AL DDRVVE+ G+ HKA+ELI SHLRKFLV
Sbjct: 217 QGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLV 274
Query: 300 DRSIIPLFEMHMQMPNPQMDH---------IPPPQSWGPPQGLPPSGGPGYGHNPQYMPP 350
DRS++PLFE ++ N + PPP WG P P GGPGY NP YMPP
Sbjct: 275 DRSVLPLFETQIKAHNMHREQPMPPPQAWGPPPPSPWGHPPPNLPPGGPGYVGNPHYMPP 334
Query: 351 PRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
Q Y PP+EKQPH GIS+YGR+AP + + Q+ S +QVT MQ+PL
Sbjct: 335 RPQENYYP--PPDVPPVEKQPHYGISSYGRDAPPSAPPGNQNQAHGS--SQVTHSMQVPL 390
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
SYADAVIG AGASISYIRR SGAT++IQE G PGEMTVEI+G+ASQVQTAQQLI+
Sbjct: 391 SYADAVIGAAGASISYIRRHSGATISIQE--GAPGEMTVEITGSASQVQTAQQLIK---- 444
Query: 471 EAAAPSQAQMGASADQGYNPY----ASMYGSPPSNPGHAGHAGG-YGSV-YGSNYGY 521
P+ G D GY Y + YGSPP P A H GG YG+ Y S+YGY
Sbjct: 445 --GPPAPGPHGQPVDTGYGSYPPYGGASYGSPPGAPAPAPHNGGSYGAAPYSSSYGY 499
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/385 (54%), Positives = 268/385 (69%), Gaps = 26/385 (6%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
EKKW GWPG++VFR++VP QKVG IIGRKGEF+K++ EETR+RIKIL+G PGT ER VM+
Sbjct: 3 EKKWAGWPGDNVFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMV 62
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIG 238
SA+E+PE+++ PAM+GLLRVH+R+++G + +S A GG VS++LLV A+QAGSLIG
Sbjct: 63 SAREDPEAAISPAMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIG 122
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
+QG T+KSIQ+ S VRVL AE+LP+ AL DDRVVEV GD V +AMEL+ SHLRKFL
Sbjct: 123 RQGATIKSIQDTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFL 182
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY 358
VDRS++PLFE+++ M N Q + W P P Y N +YY
Sbjct: 183 VDRSVLPLFELNV-MAN-QNNQQSTGSQWQQPSSTQQQQPPSYSSND---------STYY 231
Query: 359 PPADL---------PPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
AD+ + Q H G+S YGR+ + GS +ITQVTQ MQIP
Sbjct: 232 GGADISHHSQTQQQSHDLANQHHHGVSMYGRDPTLG--GSIAPPPPAPVITQVTQHMQIP 289
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
LSYADA+IG+AGA+ISY+RR+SGAT+TIQETR VPGEMTVEI G+ASQVQTAQQLIQNFM
Sbjct: 290 LSYADAIIGSAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQVQTAQQLIQNFM 349
Query: 470 AEAAA---PSQAQMGASADQGYNPY 491
A++ P + ++ D Y+ Y
Sbjct: 350 TGASSGPPPYTSTYSSTVDTNYSSY 374
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/349 (61%), Positives = 256/349 (73%), Gaps = 13/349 (3%)
Query: 95 EDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKK 154
E+ D + +K ++VN + KWPGWPGESVFR+LVPAQKVG+IIGRKGEFIKK
Sbjct: 89 ENAFSGDPDMAQKDNSQVN---NVDDDKWPGWPGESVFRILVPAQKVGAIIGRKGEFIKK 145
Query: 155 IVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHA 214
+ EET+ARIKILDGPPG ERAVMISAK+EP++ L PA+DGLLRVHKRI D + +S
Sbjct: 146 MCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSPAVDGLLRVHKRITDSSNGESGQL 205
Query: 215 PSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVV 274
G T+LLVP+SQAGSLIGKQG T+KSIQ++S +VR++ E++P AL DDRVV
Sbjct: 206 QRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVV 263
Query: 275 EVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPN-PQMDHIPPPQSWGPPQGL 333
E+ G+ GV KA+ELI SHLRKFLVDRS++PLFE HM+M P+ +PPPQ WGPPQ
Sbjct: 264 EIQGEPLGVQKAVELIASHLRKFLVDRSVLPLFETHMKMHGMPREQPVPPPQHWGPPQTW 323
Query: 334 -----PPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHG 388
P GGPG+G NPQ++ PPR +SYYP D P MEKQPH GISAYGREAP +
Sbjct: 324 GPPPNIPPGGPGFGGNPQFI-PPRPQDSYYPTPDA-PAMEKQPHYGISAYGREAPPSGAS 381
Query: 389 SSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI 437
++ Q +QVT M IPL+YADAVIG AGASISYIRR SGATVTI
Sbjct: 382 ATGNQPLSHAGSQVTHNMHIPLNYADAVIGAAGASISYIRRHSGATVTI 430
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/357 (56%), Positives = 256/357 (71%), Gaps = 24/357 (6%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
KKW GWPG++VFR++VP QKVG IIGRKGEF+K++ EETR+RIKIL+G PGT ER VM+S
Sbjct: 1 KKWAGWPGDNVFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVS 60
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGK 239
A+E+PE+++ PAM+GLLRVH+R+++G + +S+ A GG VS++LLV A+QAGSLIG+
Sbjct: 61 AREDPEAAISPAMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGR 120
Query: 240 QGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
QG T+KSIQ++S VRVL AE+LP+ AL DDRVVEV G+ V +A EL+ +HLRKFL
Sbjct: 121 QGATIKSIQDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFL 180
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY 358
VDRS++PLFE++ + N Q + W P P Y N SYY
Sbjct: 181 VDRSVLPLFELNRAVAN-QSNQQSTASQWQQPSSTQQQQPPNYSSND---------SSYY 230
Query: 359 PPADLPPPMEKQP--------HQGISAYGREAPVNVHGSSNAQSTPS-MITQVTQQMQIP 409
A+LP + Q H G+S YGR+ + G + TP+ +ITQVTQ MQIP
Sbjct: 231 GAAELPHHSQPQQQSHDLANHHHGLSLYGRDPTL---GGTIVPPTPAPVITQVTQHMQIP 287
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
LSYADA+IG AGA+ISY+RR+SGAT+TIQETR VPGEMTVEI G+ASQVQTAQQLIQ
Sbjct: 288 LSYADAIIGGAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQVQTAQQLIQ 344
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 184/301 (61%), Positives = 233/301 (77%), Gaps = 13/301 (4%)
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
M+SAKEEP+ S+PPA+D LLRVHK++V+ +D + + SG G V T+LLV +QAGSLI
Sbjct: 1 MVSAKEEPDCSIPPAVDVLLRVHKQVVN-VDPHPADSASGAGRPVVTRLLVADTQAGSLI 59
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
GKQG T+KS Q+A+ C +R+LG+E LPVFAL+DD VVE+ G++SGVHKA+EL+ HLRKF
Sbjct: 60 GKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHLRKF 119
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPP----QSWGPPQGL-----PPSGGPGYGHNPQYM 348
LVDRSI+ +FE MQ P+ +++ PP Q WGPPQG GGP + NPQYM
Sbjct: 120 LVDRSIVVVFETQMQRPDVRVNQNVPPGPPHQPWGPPQGFQAPGPGSGGGPVFPPNPQYM 179
Query: 349 PPPRQAESYYPPADLPPPMEKQPHQGIS-AYGREAPVNVHGSSNAQSTPSMITQVTQQMQ 407
PP ++YYPPADL PPM+K HQG + AY R+A + +H SS+AQ S++T+VTQ MQ
Sbjct: 180 PPSHNYDNYYPPADL-PPMDKHLHQGPAPAYVRDASMGIH-SSSAQPQQSVVTKVTQHMQ 237
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQN 467
IPLSYADAVIG +GA+ISYIRR+SGA++TIQETRGVPGEMTVEISGTASQ+Q AQQL+Q
Sbjct: 238 IPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQAAQQLVQV 297
Query: 468 F 468
F
Sbjct: 298 F 298
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 173/269 (64%), Positives = 208/269 (77%), Gaps = 9/269 (3%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
+KWPGWPGE+VFRML+P QKVG IIGRKGE IKK+ EET+ARIKILDGPPGT+ERAVM+S
Sbjct: 31 EKWPGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVS 90
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQ 240
AKEEP++ + PA+DGLLRVHK I+D ++SD PS G VST+LLV A+QAGSLIGKQ
Sbjct: 91 AKEEPDAPIAPAIDGLLRVHKCIMD-VESD---VPSAAGVMVSTRLLVVAAQAGSLIGKQ 146
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
G T+KSIQEASNCIVRVLG E+LP+FALQ+D VVE+ G+ + VHKA+ELI S+LRKFLVD
Sbjct: 147 GATIKSIQEASNCIVRVLG-ENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVD 205
Query: 301 RSIIPLFEMHMQMPNPQ-MDHIPPPQSWGPPQGLPPSGG--PGYGHNPQYMPPPRQAESY 357
RS+I +FEM MQ PN Q +++PP QSW P Q P + G PG+ N QYM PP Q ++Y
Sbjct: 206 RSVIKVFEMEMQKPNTQGNENMPPQQSWDPSQVFPINTGGEPGFVPNLQYMQPPYQLDNY 265
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNV 386
YPP P + HQG YGRE V
Sbjct: 266 YPPPAQTPLDQHHHHQG-PPYGRETDVTF 293
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 98/126 (77%), Gaps = 6/126 (4%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+TQ MQ+PLSYADAVIG +G +ISY+RR+SGAT+ I+ET+GVPGEMTVEI+G+ SQVQTA
Sbjct: 733 ITQYMQVPLSYADAVIGASGVNISYVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTA 792
Query: 462 QQLIQNFMAEAAAPSQAQMGASADQGYNPY---ASMYGSPPSNP-GHAG-HAGG-YGSVY 515
QQLIQNFMAEAA+ + G + QGYNP+ ++ S PSN H G AGG YGSVY
Sbjct: 793 QQLIQNFMAEAASSTLNLAGGAISQGYNPFPTHGAVSTSQPSNVIEHLGPSAGGSYGSVY 852
Query: 516 GSNYGY 521
GS+ GY
Sbjct: 853 GSHSGY 858
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 177/284 (62%), Positives = 214/284 (75%), Gaps = 16/284 (5%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
+KWPGWPGE+VFRML+P QKVG IIGRKGE IKK+ EET+ARIKILDGPPGT+ERAVM+S
Sbjct: 31 EKWPGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVS 90
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQ 240
AKEEP++ + PA+DGLLRVHK I+D ++SD PS G VST+LLV A+QAGSLIGKQ
Sbjct: 91 AKEEPDAPIAPAIDGLLRVHKCIMD-VESD---VPSAAGVMVSTRLLVVAAQAGSLIGKQ 146
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
G T+KSIQEASNCIVRVLG E+LP+FALQ+D VVE+ G+ + VHKA+ELI S+LRKFLVD
Sbjct: 147 GATIKSIQEASNCIVRVLG-ENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVD 205
Query: 301 RSIIPLFEMHMQMPNPQ-MDHIPPPQSWGPPQGLPPSGG--PGYGHNPQYMPPPRQAESY 357
RS+I +FEM MQ PN Q +++PP QSW P Q P + G PG+ N QYM PP Q ++Y
Sbjct: 206 RSVIKVFEMEMQKPNTQGNENMPPQQSWDPSQVFPINTGGEPGFVPNLQYMQPPYQLDNY 265
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ 401
YPP P + HQG YGRE V S+PS+ Q
Sbjct: 266 YPPPAQTPLDQHHHHQG-PPYGRETAAGV-------SSPSLTPQ 301
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/383 (46%), Positives = 248/383 (64%), Gaps = 15/383 (3%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
++EKKWPGWPG+ VFR++VP KVGSIIGRKGE IKK+ EETRARI++LDG GT++R V
Sbjct: 66 ASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIV 125
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK--VSTKLLVPASQAGS 235
+IS +EEPE+ L PAMD ++RV KR+ +S+ G G S +LLV ++QA +
Sbjct: 126 LISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAIN 185
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGKQG +KSIQE++ VRVL +++P +A D+R+VE+ G+A V KA+E + HLR
Sbjct: 186 LIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLR 245
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
KFLVD S++PLFE + N + +W L + G G + Y P ++ E
Sbjct: 246 KFLVDHSVLPLFE---RTYNATISQDRQSDTWADKSLLHGTSQTGMGSD--YSLPAKR-E 299
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVN-VHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
S Y D ME H G+ YG+E ++ + S ++ ++TQ+ Q MQIPLSYA+
Sbjct: 300 SLY--LDRETQME---HSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAE 354
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAA 474
+IG GA+I+YIRR+SGA +T+QE+RG+P E+TVEI GT+SQVQTAQQLIQ F++
Sbjct: 355 DIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNHKE 414
Query: 475 PSQAQMGASADQGYNPYASMYGS 497
P + G D G S G+
Sbjct: 415 PVPSSYG-KMDSGLRSSYSQLGN 436
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/388 (45%), Positives = 246/388 (63%), Gaps = 28/388 (7%)
Query: 122 KWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA 181
KWPGWPG++VFR++VP KVGSIIGRKGE +KK+ +ETRARI+IL+GP G T+R V+IS
Sbjct: 45 KWPGWPGDNVFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISG 104
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGL---DSDSSHAPSGTGGK----VSTKLLVPASQAG 234
KEEPE+ L PAMD +LRV KR V GL + D++ + + S +LLV +SQA
Sbjct: 105 KEEPEAPLSPAMDAVLRVFKR-VSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAI 163
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+LIGKQG +KSIQE + +VRV+ +D+P +A D+R+VE+ G+A V KA+E + HL
Sbjct: 164 NLIGKQGSIIKSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHL 223
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWG----PPQGLPPSGGPG----YGHNPQ 346
RKFLVD S+IP+FE + N + P + P P+ G Y + +
Sbjct: 224 RKFLVDHSVIPIFE---KTYNATISLERPADACADNAQPSLHSAPAFSSGIISDYSLSLK 280
Query: 347 YMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
P + E+++ K G S YG V + + ++T ++TQVTQ M
Sbjct: 281 RDPSIYEHETHFE--------HKISQPGFSLYGDPGLVGLRSTGLGRATAPIVTQVTQTM 332
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
Q+PLSYA+ +IG AG++I+YIRR+SGA ++IQE+RG+P E+TVEI GT+SQVQ AQQLIQ
Sbjct: 333 QVPLSYAEDIIGVAGSNIAYIRRTSGAILSIQESRGLPDEITVEIKGTSSQVQMAQQLIQ 392
Query: 467 NFMAEAAAPSQAQMGASADQGYNPYASM 494
F++ P+ M D G N Y+ +
Sbjct: 393 EFISNHKEPT-PNMYGKIDVGLNAYSQI 419
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 185/408 (45%), Positives = 258/408 (63%), Gaps = 20/408 (4%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
TE KWPGWPG++V+R++VP KVGSIIGRKGE IKK+ ETRARI+ILDGPP ++R V+
Sbjct: 16 TEGKWPGWPGDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVL 75
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGL---DSDSSHAPSGTGGKVSTKLLVPASQAGS 235
IS KEEPE++L PAMD +LRV KR V GL ++D+ + S KLLV +SQA +
Sbjct: 76 ISGKEEPEAALSPAMDAVLRVFKR-VSGLSAGEADAMGSAVAGAAFSSVKLLVASSQAIN 134
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGKQG T+KSIQE++ VRVL E+ P +A D+R+VE+ G+AS V KA+E + LR
Sbjct: 135 LIGKQGSTIKSIQESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQLR 194
Query: 296 KFLVDRSIIPLFE-MHMQM------PNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYM 348
KFLVD +++P+FE H + + + D P S L + P G +Y
Sbjct: 195 KFLVDHTVVPIFEKTHNAIISQDRSADARADKTQP--SIPSLTALHSAPAPQVGIGSEYS 252
Query: 349 PPPRQAESYYPPADLPPPME-KQPHQGISAYGREAPV-NVHGSSNAQSTPSMITQVTQQM 406
++ S Y D ++ K P G+ +G+++ + + + ++ ++TQ+TQ M
Sbjct: 253 LSLKRDPSIY---DRESHLDQKIPQSGLLLFGQDSSLGGLRPTGLGRAAAPIVTQMTQTM 309
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
Q+PLSYA+ +IG G++I+YIRR+SGA +TIQE+R P E+TVEI GTASQVQ AQQLIQ
Sbjct: 310 QVPLSYAEDIIGVGGSNIAYIRRTSGAILTIQESR-TPDEITVEIKGTASQVQMAQQLIQ 368
Query: 467 NFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNPGHAGHAGGYGSV 514
F++ + G D GY+ Y + S + A H GGYGS+
Sbjct: 369 EFISNQKESTPGIYG-KMDTGYSSYTQVAESSYPSSSFASHIGGYGSL 415
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 174/387 (44%), Positives = 247/387 (63%), Gaps = 19/387 (4%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K+WPGWPG+SVFR++VP KVGSIIGRKGE IK++VEET+AR++IL+GP G TER V++S
Sbjct: 41 KRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVS 100
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHA-PSGTGGKVSTKLLVPASQAGSLIGK 239
KE+P LPPAMD L+RV KR++ D + + T G + +LLVP +QA +LIGK
Sbjct: 101 GKEDPGLELPPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGK 160
Query: 240 QGGTVKSIQEASNCIVRVLGAE--DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
QG T+K+IQE++ +RV+ + + P + D+R++E+ GD V KA++ + +HLRKF
Sbjct: 161 QGATIKAIQESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLRKF 220
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNP-----QYMPPPR 352
LVD S++PLFE N + W PS G + P +Y+ P +
Sbjct: 221 LVDHSVLPLFE----KTNTTVSQDRNGDGWSDMS--HPSIGSAQVNQPPSVVDEYILPVK 274
Query: 353 QAESYYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
+ ES Y + P ++ H+ G+S YGR+ ++ S ++TQ+TQ MQIPL+
Sbjct: 275 R-ESLY--LEREPLVDHNIHRSGVSLYGRDPALSTLRPSGIHGAGPLLTQITQTMQIPLT 331
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
YA+ +IG GA+I+YIR +SGA VTIQE+ G P ++TVEI GT+SQVQ AQQLIQ+ +A
Sbjct: 332 YAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQDSLAA 391
Query: 472 AAAPSQAQ-MGASADQGYNPYASMYGS 497
P ++ +GA D Y S YGS
Sbjct: 392 HREPVRSSYVGAGLDSVYRSSYSQYGS 418
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/388 (44%), Positives = 242/388 (62%), Gaps = 21/388 (5%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K+WPGWPG+SVFR++VP KVGSIIGRKGE IK++VEET+AR++IL+GP G TER V++S
Sbjct: 37 KRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVS 96
Query: 181 AKEEPESSLPPAMDGLLRVHKR---IVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
KE+P+ LPPAMD L+RV KR I DG + A T + +LLVP +QA +LI
Sbjct: 97 GKEDPDLELPPAMDALMRVFKRVTGITDGAAEGTQAA--ATPDVCAARLLVPGAQAINLI 154
Query: 238 GKQGGTVKSIQEASNCIVRVLGAE--DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
GKQG T+K+IQE+++ +RV+ + + P + D+R+VE+ GD V KA++ + +HLR
Sbjct: 155 GKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 214
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ----YMPPP 351
KFLVD S++PLFE N + W P G P Y+
Sbjct: 215 KFLVDHSVLPLFE----KTNTTVSQDRNGDGWS-DMSRPSIGSAQVNQLPSVLDDYILQV 269
Query: 352 RQAESYYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
++ Y L ++ H+ G+S YGR+ ++ S S++TQ+TQ MQIPL
Sbjct: 270 KRDPLYLERESL---VDHNIHRSGVSLYGRDPALSTLRPSAVHGAGSLLTQITQTMQIPL 326
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
+YA+ +IG GA+I+YIR +SGA VTIQE+ G P ++TVEI GT+SQVQ AQQLIQ+ +A
Sbjct: 327 TYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQDSLA 386
Query: 471 EAAAPSQAQ-MGASADQGYNPYASMYGS 497
P ++ +GA D Y S YGS
Sbjct: 387 AHREPVRSSYVGAGLDSVYRSSYSQYGS 414
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/388 (44%), Positives = 242/388 (62%), Gaps = 21/388 (5%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K+WPGWPG+SVFR++VP KVGSIIGRKGE IK++VEET+AR++IL+GP G TER V++S
Sbjct: 37 KRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVS 96
Query: 181 AKEEPESSLPPAMDGLLRVHKR---IVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
KE+P+ LPPAMD L+RV KR I DG + A T + +LLVP +QA +LI
Sbjct: 97 GKEDPDLELPPAMDALMRVFKRVTGITDGAAEGTQAA--ATPDVCAARLLVPGAQAINLI 154
Query: 238 GKQGGTVKSIQEASNCIVRVLGAE--DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
GKQG T+K+IQE+++ +RV+ + + P + D+R+VE+ GD V KA++ + +HLR
Sbjct: 155 GKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 214
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ----YMPPP 351
KFLVD S++PLFE N + W P G P Y+
Sbjct: 215 KFLVDHSVLPLFE----KTNTTVSQDRNGDGWS-DMSRPSIGSAQVNQLPSVLDDYILQV 269
Query: 352 RQAESYYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
++ Y L ++ H+ G+S YGR+ ++ S S++TQ+TQ MQIPL
Sbjct: 270 KRDPLYLERESL---VDHNIHRSGVSLYGRDPALSTLRPSAVHGAGSLLTQITQTMQIPL 326
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
+YA+ +IG GA+I+YIR +SGA VTIQE+ G P ++TVEI GT+SQVQ AQQLIQ+ +A
Sbjct: 327 TYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQDSLA 386
Query: 471 EAAAPSQAQ-MGASADQGYNPYASMYGS 497
P ++ +GA D Y S YGS
Sbjct: 387 AHREPVRSSYVGAGLDSVYRSSYSQYGS 414
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/386 (45%), Positives = 243/386 (62%), Gaps = 31/386 (8%)
Query: 89 PEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRK 148
P +Q + P DS E + G ++KKWPGWPG+ VFR++VP KVGSIIGRK
Sbjct: 45 PSNQDYSSVPPSDSAAHEPSNH-----TGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRK 99
Query: 149 GEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLD 208
G+ IKK+ EETRARI++LDG GT +R V+IS KEE ES L PAMD ++RV KR V GL
Sbjct: 100 GDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKR-VSGLS 158
Query: 209 SDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFAL 268
+ A + S +LLV ++QA +LIGKQG +KSIQE++ VRVL +++P +A
Sbjct: 159 ENEDEAKASF---CSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG 215
Query: 269 QDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWG 328
D+R+VE+ G++ V KA+E + HLRKFLVD S++PLFE P Q ++W
Sbjct: 216 ADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQ---TETWA 272
Query: 329 PPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPH-------QGISAYGRE 381
L + + +Y P ++ ES + ++++ H GIS YG++
Sbjct: 273 DKSSLLTASQSII--SAEYAPSTKR-ESLF--------LDREAHFDSHISSSGISLYGQD 321
Query: 382 APV-NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQET 440
+ + S +S ++TQVTQ MQIPLSYA+ +IG G +I++IRR+SGA +TIQE+
Sbjct: 322 RVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQES 381
Query: 441 RGVPGEMTVEISGTASQVQTAQQLIQ 466
RG+P E+TVEI GT+SQVQ AQQLIQ
Sbjct: 382 RGLPDEITVEIKGTSSQVQMAQQLIQ 407
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 202/283 (71%), Gaps = 17/283 (6%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
+KKWPGWPGESVFR+L+PAQKVG+IIGRKGEFIKK+ EE++ARIKILDGPPG ER VM
Sbjct: 97 ADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVM 156
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
ISAK+EP++ + PAMDGL RV+KRI DG D DS T+LLVPASQAGSLIG
Sbjct: 157 ISAKDEPDAPISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIG 216
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
KQG T+KSIQ++S IVR++ E LP+ AL DDRVVE+ G+ GV KA+E I SHLRKFL
Sbjct: 217 KQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFL 274
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGH----------NPQYM 348
VDRS++PLFE M+M N Q + + P G P GP H +PQ+M
Sbjct: 275 VDRSVLPLFEGQMKMHNAQREQA---MAAPQPWGPPQPWGPPPSHLPPGGPGYGGHPQFM 331
Query: 349 PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSN 391
PPR ++YYPP D+ P MEKQPH GISAYGREAP V S N
Sbjct: 332 -PPRPQDNYYPPPDV-PSMEKQPHYGISAYGREAPTGVSASGN 372
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/387 (44%), Positives = 244/387 (63%), Gaps = 20/387 (5%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K+WPGWPG+SVFR++VP KVGSIIGRKGE IK++VE T+AR++IL+GP G TER V++S
Sbjct: 31 KRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVS 90
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHA-PSGTGGKVSTKLLVPASQAGSLIGK 239
KE+P L PAMD L+RV KR++ D + + T G + +LLVP +QA +LIGK
Sbjct: 91 GKEDPGLELSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGK 150
Query: 240 QGGTVKSIQEASNCIVRVLGAE--DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
QG T+K+IQE++ +RV+ + + P + D+R+VE+ GD V KA++ + +HLRKF
Sbjct: 151 QGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKF 210
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNP-----QYMPPPR 352
LVD S++PLFE + DH + G PS G + P +Y+ P +
Sbjct: 211 LVDHSVLPLFEKTNTAVS--QDH-----NVGWSDMSHPSIGSAQVNQPPSVVDEYILPVK 263
Query: 353 QAESYYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
+ Y + P ++ H+ G+S YGR+ ++ ++TQ+TQ MQIPL+
Sbjct: 264 RDTLYL---EREPLLDHNIHRSGVSLYGRDPALSTLRPPGIHGAGPLLTQITQTMQIPLT 320
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
YA+ +IG GA+I+YIR +SGA VTIQE+ G P ++TVEI GT+SQVQ AQQLIQ+ +A
Sbjct: 321 YAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQDSLAA 380
Query: 472 AAAPSQAQ-MGASADQGYNPYASMYGS 497
P ++ +GA D Y S YGS
Sbjct: 381 HREPVRSSYVGAGLDSLYRSSYSQYGS 407
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/386 (44%), Positives = 240/386 (62%), Gaps = 17/386 (4%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K+WPGWPG+SVFR++VP KVGSIIGRKGE IK++VEET+AR++IL+GP G TER V++S
Sbjct: 37 KRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVS 96
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKV-STKLLVPASQAGSLIGK 239
KE+P+ LPPAMD L+RV K + D + + V + +LLVP +QA +LIGK
Sbjct: 97 GKEDPDLELPPAMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGK 156
Query: 240 QGGTVKSIQEASNCIVRVLGAE--DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
QG T+K+IQE+++ +RV+ + + P + D+R+VE+ GD V KA++ + +HLRKF
Sbjct: 157 QGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKF 216
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ----YMPPPRQ 353
LVD S++PLFE N + W P G P Y+ ++
Sbjct: 217 LVDHSVLPLFE----KTNTTVSQDRNGDGWS-DMSRPSIGSAQVNQLPSVLDDYILQVKR 271
Query: 354 AESYYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
Y L ++ H+ G+S YGR+ ++ S S++TQ+TQ MQIPL+Y
Sbjct: 272 DPLYLERESL---VDHNIHRSGVSLYGRDPALSTLRPSAVHGAGSLLTQITQTMQIPLTY 328
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEA 472
A+ +IG GA+I+YIR +SGA VTIQE+ G P ++TVEI GT+SQVQ AQQLIQ+ +A
Sbjct: 329 AEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQDSLAAH 388
Query: 473 AAPSQAQ-MGASADQGYNPYASMYGS 497
P ++ +GA D Y S YGS
Sbjct: 389 REPVRSSYVGAGLDSVYRSSYSQYGS 414
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/369 (44%), Positives = 237/369 (64%), Gaps = 21/369 (5%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K+WPGWPG+SVFRM+VP KVGSIIGRKGE IK++VEET+AR+++LDGP G TER V++S
Sbjct: 38 KRWPGWPGDSVFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVS 97
Query: 181 AKEEPESSLPPAMDGLLRVHKRI--VDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
KEEP LPPAMD L+RV KR+ + + +DS+ + G + +LLVP +QA +LIG
Sbjct: 98 GKEEPGLDLPPAMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIG 157
Query: 239 KQGGTVKSIQEASNCIVRVLGAE--DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
KQG ++K+IQE + +RV+ + + P + D+R+VE+ G+ V KA++ + +HLRK
Sbjct: 158 KQGASIKAIQEGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLRK 217
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ------YMPP 350
FLVD S++PLFE N + +W +P N Q Y+ P
Sbjct: 218 FLVDHSVLPLFE----KTNAPVSQDRSADTWA---DMPHHSIVSTQVNQQPEVRDEYILP 270
Query: 351 PRQAESYYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
++ Y + P ++ H+ G+S YGR+ ++ S S ++TQ+TQ MQIP
Sbjct: 271 MKREHLYL---EREPLVDHNIHRSGVSLYGRDPALSALRPSGMHSVGPLLTQITQTMQIP 327
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
L+YA+ +IG GA+I+YIR +SGA VTIQE+ G P ++TVEI GT+SQVQ AQQLIQ+ +
Sbjct: 328 LTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQDSL 387
Query: 470 AEAAAPSQA 478
A P ++
Sbjct: 388 AAHREPVRS 396
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 171/387 (44%), Positives = 243/387 (62%), Gaps = 20/387 (5%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K+WPGWPG+SVFR++VP KVGSIIGRKGE IK++VE T+AR++IL+GP G TER V++S
Sbjct: 31 KRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVS 90
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHA-PSGTGGKVSTKLLVPASQAGSLIGK 239
KE+P L PAMD L+RV KR++ D + + T G + +LLVP +QA +LIGK
Sbjct: 91 GKEDPGLELSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGK 150
Query: 240 QGGTVKSIQEASNCIVRVLGAE--DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
QG T+K+IQE++ +RV+ + + P + D+R+VE+ GD V KA++ + +HLRKF
Sbjct: 151 QGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKF 210
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNP-----QYMPPPR 352
LVD S++PLFE + DH + G PS G + P +Y+ P +
Sbjct: 211 LVDHSVLPLFEKTNTAVS--QDH-----NVGWSDMSHPSIGSAQVNQPPSVVDEYILPVK 263
Query: 353 QAESYYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
+ Y L ++ H+ G+S YGR+ ++ ++TQ+TQ MQIPL+
Sbjct: 264 RDTLYLERETL---LDHNIHRSGVSLYGRDPALSTLRPPGIHGAGPLLTQITQTMQIPLT 320
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
YA+ +IG GA+I+YIR +SGA VTIQE+ G P ++TVEI GT+SQVQ AQQLIQ+ +A
Sbjct: 321 YAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQDSLAA 380
Query: 472 AAAPSQAQ-MGASADQGYNPYASMYGS 497
P ++ +GA D Y S YGS
Sbjct: 381 HREPVRSSYVGAGLDSLYRSSYSQYGS 407
>gi|115489418|ref|NP_001067196.1| Os12g0597600 [Oryza sativa Japonica Group]
gi|113649703|dbj|BAF30215.1| Os12g0597600, partial [Oryza sativa Japonica Group]
Length = 367
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 239/355 (67%), Gaps = 35/355 (9%)
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
VMISAK+EP++ LPPA+DGLLRVHKRI DGLD +S G T+LLVPASQAGSL
Sbjct: 12 VMISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSL 71
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGKQG T+KSIQ+AS C++R+L E +P AL DDRVVE+ G+ VHKA+ELI SHLRK
Sbjct: 72 IGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRK 129
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN-----------P 345
FLVDRS++PLFEM M++ N + Q PPQ P G+ N P
Sbjct: 130 FLVDRSVLPLFEMQMKVHNAHRE-----QPMPPPQTWGPPPPWGHPSNVPPGGPGYGGNP 184
Query: 346 QYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREA-PVNVHGSSNAQSTPSMITQVTQ 404
Q+MPP + + +Y P PP+EKQPH GIS+YGR+A P +S Q P +Q+T
Sbjct: 185 QFMPP--RPQDHYYPPPDVPPVEKQPHYGISSYGRDAPPTGAPPASGNQHPPHGSSQITH 242
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
MQ+PLSYADAVIG AGASISYIRR SGAT++IQE GVPGEMTVEISG+ASQVQTAQQL
Sbjct: 243 SMQVPLSYADAVIGAAGASISYIRRHSGATISIQE--GVPGEMTVEISGSASQVQTAQQL 300
Query: 465 IQNFMAEAA----APSQAQMGASADQGYNPY----ASMYGSPPSNPGHAG-HAGG 510
I+NFMAEA+ + A D GY+ Y + YGSP PG AG H GG
Sbjct: 301 IKNFMAEASPQGPPQAPAPPAQPVDTGYSSYPPYGGTSYGSP---PGGAGPHNGG 352
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/388 (43%), Positives = 244/388 (62%), Gaps = 23/388 (5%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K+WPGWPG++VFRM+VP KVGSIIGRKGE IK++VEET+AR+++L+GP G TER V++S
Sbjct: 42 KRWPGWPGDNVFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVS 101
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHA--PSGTGGKVSTKLLVPASQAGSLIG 238
AKE+P LPPAMD L+RV KR V+G+ ++ S G + +L+VP +QA +LIG
Sbjct: 102 AKEDPGLELPPAMDALIRVFKR-VNGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIG 160
Query: 239 KQGGTVKSIQEASNCIVRVLGAE--DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
KQG ++K+IQE + +RV+ + D P + D+R+VE+ G+ V KA++ + +HLRK
Sbjct: 161 KQGASIKAIQEGTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLRK 220
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ------YMPP 350
FLVD S++PLFE N + ++W +P N Q Y+ P
Sbjct: 221 FLVDHSVLPLFE----KTNAPVSQDRSAETW---NDMPHHSIVSTQVNQQPEVRDEYVLP 273
Query: 351 PRQAESYYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
++ Y + P +E H+ G+S YGR+ ++ S ++TQ+TQ MQIP
Sbjct: 274 MKRDHLYL---EREPLVEHNIHRSGVSLYGRDPALSALRPSGMHGAGPLLTQITQTMQIP 330
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
L+YA+ +IG GA+I+YIR +SGA VTIQE+ G P ++TVEI GT+SQVQ+AQQLIQ+ +
Sbjct: 331 LTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQSAQQLIQDSL 390
Query: 470 AEAAAPSQAQMGASADQGYNPYASMYGS 497
A P ++ A D Y YGS
Sbjct: 391 AAHREPVRSSY-AGLDPLYRSSYPQYGS 417
>gi|108862918|gb|ABG22073.1| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|215694782|dbj|BAG89973.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 355
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 198/354 (55%), Positives = 238/354 (67%), Gaps = 35/354 (9%)
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
MISAK+EP++ LPPA+DGLLRVHKRI DGLD +S G T+LLVPASQAGSLI
Sbjct: 1 MISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLI 60
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
GKQG T+KSIQ+AS C++R+L E +P AL DDRVVE+ G+ VHKA+ELI SHLRKF
Sbjct: 61 GKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRKF 118
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN-----------PQ 346
LVDRS++PLFEM M++ N + Q PPQ P G+ N PQ
Sbjct: 119 LVDRSVLPLFEMQMKVHNAHRE-----QPMPPPQTWGPPPPWGHPSNVPPGGPGYGGNPQ 173
Query: 347 YMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREA-PVNVHGSSNAQSTPSMITQVTQQ 405
+MPP + + +Y P PP+EKQPH GIS+YGR+A P +S Q P +Q+T
Sbjct: 174 FMPP--RPQDHYYPPPDVPPVEKQPHYGISSYGRDAPPTGAPPASGNQHPPHGSSQITHS 231
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
MQ+PLSYADAVIG AGASISYIRR SGAT++IQE GVPGEMTVEISG+ASQVQTAQQLI
Sbjct: 232 MQVPLSYADAVIGAAGASISYIRRHSGATISIQE--GVPGEMTVEISGSASQVQTAQQLI 289
Query: 466 QNFMAEAA----APSQAQMGASADQGYNPY----ASMYGSPPSNPGHAG-HAGG 510
+NFMAEA+ + A D GY+ Y + YGSP PG AG H GG
Sbjct: 290 KNFMAEASPQGPPQAPAPPAQPVDTGYSSYPPYGGTSYGSP---PGGAGPHNGG 340
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/378 (43%), Positives = 233/378 (61%), Gaps = 21/378 (5%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
++WPGWPG+ VFRM+VP KVG+IIGRKG+FIKK+ EETRARIK+LDGP T +R V+IS
Sbjct: 65 ERWPGWPGDCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLIS 124
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQ 240
KEEPE+ + PAMD +LRV +R+ D+D + S +LLV ++QA +LIGKQ
Sbjct: 125 GKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQ 184
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
G +KSI E S VR+L E+ P +A QD+R+V++ G+A + KA+E I HLRKFLVD
Sbjct: 185 GSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRKFLVD 244
Query: 301 RSIIPLFE-MHMQMPNPQMDHIPPPQSWGPPQGLP-----PSGGPGYGHNPQYMPPPRQA 354
+++PLFE ++ + P +S + P +P ++ +
Sbjct: 245 HTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNVIEPDFSLLARRDPLFLDRDARV 304
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNV-HGSSNAQSTPSMITQVTQQMQIPLSYA 413
ES P G+S Y ++ ++ H A+ + + +TQV+Q MQIP SYA
Sbjct: 305 ESRVQPT------------GVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYA 352
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
+ +IG GA+I+YIRR SGAT+TI+E+ P ++TVEI GT+SQVQTA+QLIQ F++
Sbjct: 353 EDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTSSQVQTAEQLIQEFISNHK 411
Query: 474 APSQAQMG-ASADQGYNP 490
P G A D GY P
Sbjct: 412 EPVSVSGGYARIDTGYVP 429
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/365 (44%), Positives = 234/365 (64%), Gaps = 12/365 (3%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
EK+WPGWPG+ VFR++VP KVGSIIGRKGE IKK+ EETR+RI++LD P GT +R V++
Sbjct: 43 EKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLV 102
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST-KLLVPASQAGSLIG 238
S KE+PE++L PAMD ++R+ KR+ ++D+ + S G S+ +LLV ++QA +LIG
Sbjct: 103 SGKEDPEAALSPAMDAVVRIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIG 162
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
KQG +KSIQE ++ VRVL +++ +A ++R+VE+ G+A V KA+E + HLRKFL
Sbjct: 163 KQGSLIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFL 222
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY 358
VD S++PLFE P Q ++W L S + P +
Sbjct: 223 VDHSVLPLFEKTYNAPTSQDRQ---AETWSDKSLLHTS-----SRTSIFADIPLSTKRDS 274
Query: 359 PPADLPPPMEK-QPHQGISAYGREAPVN-VHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416
AD ++ P +S YG+++ ++ VH S+ + ++T V Q MQIPLSYA+ +
Sbjct: 275 VLADRESQLDLFLPSSTMSLYGQDSSLSGVHSSALGRVGAPIVTTVIQTMQIPLSYAEDI 334
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
IG G +I YIRR+SGA +T+QE+R VP E+ VEI GT+S+VQTAQQLIQ+ ++ P
Sbjct: 335 IGIQGTNIEYIRRTSGAILTVQESR-VPDEIVVEIKGTSSEVQTAQQLIQDVISSHKEPV 393
Query: 477 QAQMG 481
+ G
Sbjct: 394 TSSYG 398
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/390 (42%), Positives = 237/390 (60%), Gaps = 24/390 (6%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K+WPGWPG+SVFR++VP KVGSIIGRKGE IK++VEET+A++++L+GP G TER V++S
Sbjct: 47 KRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVS 106
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG-GKVSTKLLVPASQAGSLIGK 239
KE+P LPPAMD L+RV KR+ D + + T G + +LLVP +QA +LIGK
Sbjct: 107 GKEDPALELPPAMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGK 166
Query: 240 QGGTVKSIQEASNCIVRVLGAE--DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
QG ++K+IQE + +RV+ + + P + ++D+R+VE+ G+ V KA++ + +HLRKF
Sbjct: 167 QGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLRKF 226
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY 357
LVD S++PLFE N + +W P PPP E
Sbjct: 227 LVDHSVLPLFE----KTNATVTQDRSTDAW------TDISHPSIVSAQINQPPPVVDEYI 276
Query: 358 YPPADLPPPMEKQP-------HQGISAYGRE---APVNVHGSSNAQSTPSMITQVTQQMQ 407
P P +E++P G+S YGR+ + + G +++Q+TQ MQ
Sbjct: 277 LPMKRDPLFLEREPLIDHNIHRSGVSLYGRDPALSTLRTSGIHGGGPGGPLLSQITQTMQ 336
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQN 467
IPL+YA+ +IG GA+I+YIR +SGA VTIQE+ G P ++TVE+ GT+SQVQ A QLIQ+
Sbjct: 337 IPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEMKGTSSQVQAAYQLIQD 396
Query: 468 FMAEAAAPSQAQMGASADQGYNPYASMYGS 497
+A A S A D Y P S YGS
Sbjct: 397 SLA-AHRDSVRSSYAGLDPVYRPSYSQYGS 425
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 170/379 (44%), Positives = 231/379 (60%), Gaps = 17/379 (4%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
S E++WPGWPG+ VFRM+VP KVG+IIGRKG+FIKK+ EETRARIK+LDGP T +R V
Sbjct: 62 SAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIV 121
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
+IS KEEPE+ + PAMD +LRV +R+ D+D + S +LLV ++QA +LI
Sbjct: 122 LISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLI 181
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
GKQG +KSI E S VR+L E+ P +A QD+R+V++ G+A + KA+E I HLR+F
Sbjct: 182 GKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRF 241
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPP----RQ 353
LVD +++PLFE Q P L S + + M P +
Sbjct: 242 LVDHTVVPLFEKQYLARVSQTRQEEP---------LAESKSSLHTISSNLMEPDFSLLAR 292
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGREAPVNV-HGSSNAQSTPSMITQVTQQMQIPLSY 412
E + D QP G+S Y ++ ++ H A+ + + +TQV+Q MQIP SY
Sbjct: 293 REPLFLERDSRVDSRVQP-SGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSY 351
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEA 472
A+ +IG GA+I+YIRR SGAT+TI+E+ P ++TVEI GT SQVQTA+QLIQ F+
Sbjct: 352 AEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIINH 410
Query: 473 AAPSQAQMG-ASADQGYNP 490
P G A D GY P
Sbjct: 411 KEPVSVSGGYARIDSGYVP 429
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 246/394 (62%), Gaps = 16/394 (4%)
Query: 95 EDIVPED-SQLQEKQENEVNLAVGST---EKKWPGWPGESVFRMLVPAQKVGSIIGRKGE 150
E ++P++ S Q E E N A ++ EK+WPGWPG+ VFR++VP KVGSIIGRKGE
Sbjct: 13 EPLLPDNVSAAQPPTETESNAAAAASTPPEKRWPGWPGDCVFRLIVPVGKVGSIIGRKGE 72
Query: 151 FIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSD 210
IKK+ EETR+RI++LD P GT +R V++S KEEPE++L PAMD ++R+ KR+ ++D
Sbjct: 73 LIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAALSPAMDAVVRIFKRVSGLSETD 132
Query: 211 SSHAPSGTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQ 269
+ + S G S +LLV ++QA +LIGKQG +KSIQE ++ VRVL +++ +A
Sbjct: 133 AENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATV 192
Query: 270 DDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGP 329
D+R+VE+ G+A V KA+E + HLRKFLVD S++PLFE + N ++W
Sbjct: 193 DERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLFE---KTYNASTSQDRQAETWSD 249
Query: 330 PQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEK-QPHQGISAYGREAPVN-VH 387
L + + P + AD ++ P +S YG+++ ++ V
Sbjct: 250 KSLLHTT-----SRTSIFADIPYSTKRDSVLADRESQLDSFLPSSTMSLYGQDSSLSGVR 304
Query: 388 GSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEM 447
S+ + ++T V Q MQIPLSYA+ +IG G +I YIRR+SGA +T+QE+R VP E+
Sbjct: 305 SSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQESR-VPDEI 363
Query: 448 TVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMG 481
VEI GT+S+VQTAQQLIQ+ ++ P + G
Sbjct: 364 VVEIKGTSSEVQTAQQLIQDVISSHKEPITSSYG 397
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 239/391 (61%), Gaps = 31/391 (7%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
+KWPGWPG++VFR++VP KVGSIIGR+GE +KK+ +ETRARI+IL+GP G ++R V+IS
Sbjct: 2 EKWPGWPGDNVFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLIS 61
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGL-----DSDSSHAPSGTGGKVSTKLLVPASQAGS 235
KEEPE+ PAMD ++RV KR V GL D+ S A + S +LLV +SQA +
Sbjct: 62 GKEEPEAPQSPAMDAVMRVFKR-VSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAIN 120
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGKQG +KSIQE + V V+ ++LP +A D+R+VE+ G+A V KA+E + LR
Sbjct: 121 LIGKQGSIIKSIQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLR 180
Query: 296 KFLVDRSIIPLFE------MHMQMPNPQMDHIPPP---QSWGP--PQGLPPSGGPGYGHN 344
KFLVD S+IP+FE + + P I P ++ P P G+ + +
Sbjct: 181 KFLVDHSVIPIFEKTYNATISQECPADARPDIAQPSLHSAYVPTIPSGIASDYSLSFKRD 240
Query: 345 PQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGRE-APVNVHGSSNAQSTPSMITQVT 403
P Q E K G+S YG++ V + ++ ++TQVT
Sbjct: 241 PSIYEHETQFE------------HKISQPGLSIYGQDPGIVGFRSTGLGRAAAPIVTQVT 288
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
Q MQ+PLSYA+ +IG AG++I+YIRR+S A ++IQE+RG+P E+TVEI GT +QVQ AQQ
Sbjct: 289 QTMQVPLSYAEDIIGVAGSNIAYIRRTSRAILSIQESRGLPDEITVEIKGTGAQVQMAQQ 348
Query: 464 LIQNFMAEAAAPSQAQMGASADQGYNPYASM 494
LIQ F+ P+ + G D G + Y+ M
Sbjct: 349 LIQEFITNHKEPASSMYG-KIDAGLSAYSHM 378
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/350 (47%), Positives = 221/350 (63%), Gaps = 36/350 (10%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
E+KWPGWPG++VFR++VP KVG+IIGRKGEF+K++ EETR+RIKILDG PGT ER V++
Sbjct: 39 ERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLV 98
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSS-----HAPSGTGGKVSTKLLVPASQAG 234
SAKE+PE+++ PAMDGLLRVH+R+ +G D PSG V ++LLV A+QAG
Sbjct: 99 SAKEDPEATISPAMDGLLRVHRRVTEGSSGDGEPVEHIILPSGL---VQSRLLVTATQAG 155
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
SLIG+Q E+LP+ AL DDR+VEV G+ V KAMEL+ SHL
Sbjct: 156 SLIGRQ--------------------EELPLCALADDRMVEVQGEILKVQKAMELVVSHL 195
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPS---GGPGYGHNPQYMPPP 351
RKFLVDRS++ LFE ++ + I G Q S G + P
Sbjct: 196 RKFLVDRSVLQLFEFNVSFAGSR--SIGYKVHNGELQRAMSSQVQGQQAAAIATSWATPT 253
Query: 352 RQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
A + Y D + H +S YG + P V +S + P+ V+QQ+Q+PL
Sbjct: 254 VAATTPYSSTDYYADQAQSQHYAVSVYGGD-PGRVDVTSTTPAAPA--ETVSQQLQVPLL 310
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
YADA+IGTAGA+I+Y+RR+SGAT++IQET PGEMT+E+ G ++QVQTA
Sbjct: 311 YADAIIGTAGANINYMRRTSGATISIQETPNAPGEMTIEVHGQSTQVQTA 360
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/362 (45%), Positives = 228/362 (62%), Gaps = 12/362 (3%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERA 176
+ EK+WPGWPG VFR++VP KVGSIIGRKGE IKK EET+ARI++LDG GT++R
Sbjct: 33 AAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRI 92
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
V+IS KE+ E+ L PAMD ++RV KR+ + D+ + S S +LLV ++QA +L
Sbjct: 93 VLISGKEDLEAPLSPAMDAVIRVFKRVSGFSEIDAKNKASAVAF-CSVRLLVASTQAINL 151
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGKQG +KSIQE + VRVL +++P +A D+R+VE+ G+A V KA+E + HLRK
Sbjct: 152 IGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRK 211
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
FLVD S++PLFE Q +W L + P + +P + +S
Sbjct: 212 FLVDNSVLPLFEKTYNATISQERQ--ADTTWVDKPSLHSASQPSIVTD---IPLSTKRDS 266
Query: 357 YYPPADLPPPMEK-QPHQGISAYGREAPVNVHGSSNAQ--STPSMITQVTQQMQIPLSYA 413
+ AD ++ P +S YG+++ ++ SS S P ++T V Q MQIPLSYA
Sbjct: 267 LF--ADRESQLDSLLPPSTMSMYGQDSSLSGLRSSALSRPSAPPIVTTVIQTMQIPLSYA 324
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
+ +IG G +I YIRR+SGA +T+QE+R VP E+ VEI GT+SQVQTAQQLIQ ++
Sbjct: 325 EDIIGIQGTNIEYIRRTSGAILTVQESR-VPDEIIVEIKGTSSQVQTAQQLIQEVISNHT 383
Query: 474 AP 475
P
Sbjct: 384 EP 385
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 227/357 (63%), Gaps = 12/357 (3%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERA 176
ST WPGWPG+ VFR++VP KVGSIIGRKG+ IKK+ +ETRARI++LD P GT +R
Sbjct: 48 ASTSANWPGWPGDCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRV 107
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST-KLLVPASQAGS 235
V+IS KE+ E+ L PAMD ++RV KR V GL ++ G S+ +LLV ++QA +
Sbjct: 108 VLISGKEDVEAPLSPAMDAVIRVFKR-VSGLPEGNAQELGAAGIAFSSIRLLVASTQAIN 166
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGKQG +KSIQE++ VRVL ++P + D+R+V++ G+A V +A+E I HLR
Sbjct: 167 LIGKQGSIIKSIQESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLR 226
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
KFLVD S++PLFE + N + ++W + G P + +
Sbjct: 227 KFLVDHSVLPLFEKNY---NALISLDRQAETWSDRSSFHTT---SQGRIDIDYPLSGKRD 280
Query: 356 SYYPPADLPPPMEKQ-PHQGISAYGRE-APVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+ + P E Q P IS YG++ A +V S +S+ ++TQVTQ MQ+P+SYA
Sbjct: 281 ALL--LERETPFESQVPLSRISLYGQDPAISSVRSSVFNRSSVPIVTQVTQTMQVPISYA 338
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
+ +IG G +I YIRR+SGA +T+ E+RG+P E+ VEI GTAS+VQ AQQLIQ F++
Sbjct: 339 EEIIGIRGNNIEYIRRTSGAIITVNESRGLPDEIIVEIKGTASEVQMAQQLIQEFLS 395
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 166/350 (47%), Positives = 221/350 (63%), Gaps = 36/350 (10%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
E+KWPGWPG++VFR++VP KVG+IIGRKGEF+K++ EETR+RIKILDG PGT ER V++
Sbjct: 39 ERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLV 98
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSS-----HAPSGTGGKVSTKLLVPASQAG 234
SAKE+PE+++ PAMDGLLRVH+R+ +G D PSG V ++LLV A+QAG
Sbjct: 99 SAKEDPEATISPAMDGLLRVHRRVTEGSSGDGEPVEHIILPSGL---VQSRLLVTATQAG 155
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
SLIG+Q E+LP+ AL DDR+VEV G+ V KAMEL+ SHL
Sbjct: 156 SLIGRQ--------------------EELPLCALADDRMVEVQGEILKVQKAMELVVSHL 195
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPS---GGPGYGHNPQYMPPP 351
RKFLVDRS++ LFE ++ + I G Q S G + P
Sbjct: 196 RKFLVDRSVLQLFEFNVSFAGSR--SIGYKVHNGELQRAMSSQVQGQQAAAIATSWATPT 253
Query: 352 RQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
A + Y D + H +S YG + P V +S + P+ V+QQ+Q+PL
Sbjct: 254 VAATTPYSSTDYYADQAQSQHYAVSMYGGD-PGRVDVTSTTPAPPA--ESVSQQLQVPLL 310
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
YADA+IGTAGA+I+Y+RR+SGAT++IQET PGEMT+E+ G ++QVQTA
Sbjct: 311 YADAIIGTAGANINYMRRTSGATISIQETPNAPGEMTIEVHGQSTQVQTA 360
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 164/362 (45%), Positives = 229/362 (63%), Gaps = 12/362 (3%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERA 176
+ EK+WPGWPG VFR++VP KVGSIIGRKGE IKK EET+ARI++LDG GT++R
Sbjct: 33 AAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRI 92
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
V+IS KEEPE+ L PAM+ ++RV KR+ + D+ + S S +LLV ++QA +L
Sbjct: 93 VLISGKEEPEAPLSPAMNAVIRVFKRVSGFSEIDAENKASAVAF-CSVRLLVASTQAINL 151
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGKQG +KSIQE + VRVL +++P +A D+R+VE+ G+A V KA+E + HLRK
Sbjct: 152 IGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRK 211
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
FLVD S++PLFE Q +H +W L + P + +P + +S
Sbjct: 212 FLVDNSVLPLFEKTYNATISQ-EH-QADTTWVDKPSLHSASQPSIVTD---LPLSTKRDS 266
Query: 357 YYPPADLPPPMEK-QPHQGISAYGREAPVNVHGSSNAQ--STPSMITQVTQQMQIPLSYA 413
+ AD ++ P +S YG+++ ++ SS S P ++T V Q MQIPLSYA
Sbjct: 267 LF--ADRESQLDSLLPPSTMSIYGQDSSLSGLRSSALSRPSAPPIVTTVIQTMQIPLSYA 324
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
+ +IG G +I YIR +SGA +T+QE+ VP E+ VEI GT+SQVQTAQQLIQ ++
Sbjct: 325 EDIIGIQGTNIEYIRCTSGAILTVQES-PVPDEIIVEIKGTSSQVQTAQQLIQEVISNHK 383
Query: 474 AP 475
P
Sbjct: 384 EP 385
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 156/367 (42%), Positives = 230/367 (62%), Gaps = 15/367 (4%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
+EK+WPGWPG VFR++VP KVG IIGRKGE IKK EET ARI++LD P GT +R V+
Sbjct: 33 SEKRWPGWPGHCVFRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVL 92
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
IS KE+ E+ L PAMD +LR+ KR+ ++D+++ + S +LLV ++QA +LIG
Sbjct: 93 ISGKEDLEAPLSPAMDAILRIFKRVSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIG 152
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
KQG ++K+IQE + ++RVL ++LP +A D+R++++ G+ V KA+E + HLRKFL
Sbjct: 153 KQGSSIKAIQENTGAVIRVLSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLRKFL 212
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY 358
VD S+IPLFE + N + +W L + P + P + +S++
Sbjct: 213 VDSSVIPLFE---KTCNATISQDRQTDAWADKPSLYSASQPSIVAD-----IPTKRDSFF 264
Query: 359 PPADLPPPMEKQPHQGISAYGREAPVNVHGSSNA--QSTPSMITQVTQQMQIPLSYADAV 416
+ S YG+++ S+A +++ S++T V Q MQIPLSYA+ +
Sbjct: 265 ADRESQLDSLLSSSTM-SLYGQDSSSISGLRSSAFNRASASIVTTVIQTMQIPLSYAEDI 323
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA---EAA 473
IG G +I YIRR+SGA +T+QE+R VP E+ VEI GT++QVQTAQQLIQ + E
Sbjct: 324 IGIQGTNIDYIRRTSGAILTVQESR-VPDEIIVEIKGTSTQVQTAQQLIQEVITNHNETI 382
Query: 474 APSQAQM 480
A + A++
Sbjct: 383 ASNYARL 389
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 227/364 (62%), Gaps = 10/364 (2%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
E++WPGWPG+ VFR++VP KVG IIGRKG+ IKK+ +ET+AR+++LD G +R ++I
Sbjct: 60 EQRWPGWPGDCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILI 119
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDS-SHAPSGTGGKVSTKLLVPASQAGSLIG 238
S KEE E+++ PAMD ++R+ KR+ ++DS + P+G S +LLV ++QA SLIG
Sbjct: 120 SGKEELEAAISPAMDAVIRIFKRVSGLSETDSENKGPAGV-TLCSIRLLVASTQAISLIG 178
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
KQG ++SIQE+S VRVL +++ FA ++R+V++ G+A V KA+E + HLRKFL
Sbjct: 179 KQGTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFL 238
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY 358
VD SI+P++E PQ D ++W L + + +P P + +S +
Sbjct: 239 VDHSILPVYEKTYNASLPQQDR--QAETWSDKPLLHTTSQTSMFSD---IPFPTKRDSVF 293
Query: 359 PPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPS-MITQVTQQMQIPLSYADAVI 417
+ S YG+++ ++ SS+ + ++T V Q MQIPLSYA+ +I
Sbjct: 294 ADRESHLDSLLSSSTM-SLYGQDSSLSGVRSSSLSRVGAPIVTTVIQTMQIPLSYAEDII 352
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQ 477
G G +I YIRR+SGA +T+QE+R VP E+ VEI GT SQVQTAQQLIQ ++ P
Sbjct: 353 GIQGTNIDYIRRTSGAILTVQESR-VPDEIVVEIKGTTSQVQTAQQLIQEVISSHREPVT 411
Query: 478 AQMG 481
G
Sbjct: 412 NSYG 415
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 215/361 (59%), Gaps = 16/361 (4%)
Query: 122 KWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA 181
KWPGWPG++V+R++VP KVGSIIGRKGE +KK+ E+T ARI++L+GP G +R V+IS
Sbjct: 46 KWPGWPGDNVYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISG 105
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
+E+P++ + PAMD + RV KR+ GL+ A + S KLL+ +SQA LIG+ G
Sbjct: 106 REDPDAQVSPAMDAVFRVFKRVA-GLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHG 164
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
T+K IQE S +RVL +D+ +A D+R+VE+ G+ V A E + LRKFLVD
Sbjct: 165 STIKEIQERSGASLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLRKFLVDH 224
Query: 302 SIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPA 361
S+IP+FE P QS G + + +S P +
Sbjct: 225 SMIPIFEKTCSQDRPLESWAEKSQSLNSEAGAVSDYSFSMNRDTYLLDCEAAMDSKLPRS 284
Query: 362 DLPPPMEKQPHQGI-SAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTA 420
L + H GI ++ GR PV +TQ+T+ MQ+PL YA+ +IG
Sbjct: 285 TLSLYGQDPGHGGIRTSAGRIGPV--------------VTQMTKVMQVPLLYAEDIIGIG 330
Query: 421 GASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQM 480
G +I+YIRR+S A +T+QE+RG+P E+T+EI G++S+VQTA+QLIQ F++ P+ +
Sbjct: 331 GTNIAYIRRTSKAVLTVQESRGLPEEITIEIKGSSSEVQTAEQLIQEFISNHKEPAPSMY 390
Query: 481 G 481
G
Sbjct: 391 G 391
>gi|297735477|emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 151/346 (43%), Positives = 215/346 (62%), Gaps = 15/346 (4%)
Query: 155 IVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHA 214
+ EETRARI++LDG GT++R V+IS +EEPE+ L PAMD ++RV KR+ +S+
Sbjct: 1 MCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGK 60
Query: 215 PSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDR 272
G G S +LLV ++QA +LIGKQG +KSIQE++ VRVL +++P +A D+R
Sbjct: 61 AYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADER 120
Query: 273 VVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQG 332
+VE+ G+A V KA+E + HLRKFLVD S++PLFE + N + +W
Sbjct: 121 IVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFE---RTYNATISQDRQSDTWADKSL 177
Query: 333 LPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVN-VHGSSN 391
L + G G + Y P ++ ES Y D ME H G+ YG+E ++ + S
Sbjct: 178 LHGTSQTGMGSD--YSLPAKR-ESLY--LDRETQME---HSGLPMYGQEHGLSGIRSSGL 229
Query: 392 AQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEI 451
++ ++TQ+ Q MQIPLSYA+ +IG GA+I+YIRR+SGA +T+QE+RG+P E+TVEI
Sbjct: 230 GRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEI 289
Query: 452 SGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGS 497
GT+SQVQTAQQLIQ F++ P + G D G S G+
Sbjct: 290 KGTSSQVQTAQQLIQEFISNHKEPVPSSYG-KMDSGLRSSYSQLGN 334
>gi|255645221|gb|ACU23108.1| unknown [Glycine max]
Length = 208
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/211 (73%), Positives = 174/211 (82%), Gaps = 13/211 (6%)
Query: 321 IPPPQSWGPPQGLPPSGGPGYGHN--PQYMPPPRQAESYYPPADLPPPMEKQPHQGISAY 378
+PP QSWGP QGLPP+ G G G QYMPPPRQ +SYYP A++PPP+++QPHQGISAY
Sbjct: 1 MPPHQSWGPSQGLPPNVGGGPGFGPPSQYMPPPRQLDSYYPSAEMPPPVDRQPHQGISAY 60
Query: 379 GREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQ 438
GR+A + VH SSN QS PS++TQ+TQQMQIPLSYADAVIGTAGASISYIRR+SGATVTIQ
Sbjct: 61 GRDASIGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQ 120
Query: 439 ETRGVPGEMTVEISGTASQVQTAQQLIQNFM----AEAAAPSQAQMGA-SADQGYNPY-- 491
E RGVPGEMTVEISGTASQVQTAQQLIQNFM A AAAP+Q Q +ADQGYN Y
Sbjct: 121 EARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAAAAAPAQPQTTVPAADQGYNSYPA 180
Query: 492 -ASMYGSPPSNPGHAGHAGGYGSVYGSNYGY 521
S+Y SPPSNP GHAGGYGSVYG+NYGY
Sbjct: 181 HGSVYASPPSNP---GHAGGYGSVYGANYGY 208
>gi|147844462|emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
Length = 473
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 215/364 (59%), Gaps = 40/364 (10%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTER-- 175
++EKKWPGWPG+ VFR++VP KVGSIIGRKGE IKK+ EETRARI++LDG GT++R
Sbjct: 66 ASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIG 125
Query: 176 -------------------AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS 216
V+IS +EEPE+ L PAMD ++RV KR V GL S
Sbjct: 126 XMEKKMLSVLLKVVDNLLEKVLISGREEPEAPLSPAMDAVIRVFKR-VTGL---SESEGD 181
Query: 217 GTGGKVST--KLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVV 274
G +V+T + AS S G +++ A + V +L ++P +A D+R+V
Sbjct: 182 GLFDQVNTGEHWCICASTVRSWFAHFGSKFQNLX-AFSXEVYLLXQNEVPFYAAADERIV 240
Query: 275 EVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLP 334
E+ G+A V KA+E + HLRKFLVD S++PLFE + N + +W L
Sbjct: 241 ELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFE---RTYNATISQDRQSDTWADKSLLH 297
Query: 335 PSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVN-VHGSSNAQ 393
+ G G + Y P ++ ES Y D ME H G+ YG+E ++ + S +
Sbjct: 298 GTSQTGMGSD--YSLPAKR-ESLY--LDRETQME---HSGLPMYGQEHGLSGIRSSGLGR 349
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
+ ++TQ+ Q MQIPLSYA+ +IG GA+I+YIRR+SGA +T+QE+RG+P E+TVEI G
Sbjct: 350 AGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKG 409
Query: 454 TASQ 457
T+SQ
Sbjct: 410 TSSQ 413
>gi|413935392|gb|AFW69943.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 397
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 201/355 (56%), Gaps = 58/355 (16%)
Query: 122 KWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP--PGTTERAVMI 179
+WPGWPG SVFR++VPA KVG IIGR+G+ IK++ +ETRAR+++LD P G R V++
Sbjct: 90 RWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLV 149
Query: 180 SAKEEPESSLPPAMDGLLRVHKRI--VDGLDSDSSH---APSGTGGKVSTKLLVPASQAG 234
SA+EE E+ L PAM+ +++ K I ++ ++SD + AP + S +LLVP +QA
Sbjct: 150 SAREEVEAELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEIS----SVRLLVPFAQAL 205
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+IGKQG T+KSIQE++ VR++ ++L +R+VE+ G + V A++L+ L
Sbjct: 206 HVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLL 265
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQA 354
RKFLVD ++ LFE NP++ P QS G P+G YGH+P + P
Sbjct: 266 RKFLVDHGVLHLFERK----NPEVAQ--PQQSRGNPKG----SRFLYGHDPSFHAP---- 311
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
Y R+ +Q S+IT++T+ MQIPL+
Sbjct: 312 -----------------------YSRDL---------SQPADSLITKITRTMQIPLADVG 339
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+IG G ++ IR SGA V +++ G E+ V I GT SQVQTA QL+Q +
Sbjct: 340 EIIGVRGENVELIRSVSGAVVVLEKI-GNGQEVRVMIEGTPSQVQTAHQLVQVLV 393
>gi|212723546|ref|NP_001131366.1| uncharacterized protein LOC100192689 [Zea mays]
gi|194691330|gb|ACF79749.1| unknown [Zea mays]
gi|413935393|gb|AFW69944.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 467
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 202/356 (56%), Gaps = 59/356 (16%)
Query: 122 KWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP--PGTTERAVMI 179
+WPGWPG SVFR++VPA KVG IIGR+G+ IK++ +ETRAR+++LD P G R V++
Sbjct: 90 RWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLV 149
Query: 180 SAKEEPESSLPPAMDGLLRVHKRI--VDGLDSDSSH---APSGTGGKVSTKLLVPASQAG 234
SA+EE E+ L PAM+ +++ K I ++ ++SD + AP + S +LLVP +QA
Sbjct: 150 SAREEVEAELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEIS----SVRLLVPFAQAL 205
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+IGKQG T+KSIQE++ VR++ ++L +R+VE+ G + V A++L+ L
Sbjct: 206 HVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLL 265
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQA 354
RKFLVD ++ LFE NP+ + PQS G P+G YGH+P + P
Sbjct: 266 RKFLVDHGVLHLFERK----NPE---VAQPQSRGNPKG----SRFLYGHDPSFHAP---- 310
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
Y R+ +Q S+IT++T+ MQIPL+
Sbjct: 311 -----------------------YSRDL---------SQPADSLITKITRTMQIPLADVG 338
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
+IG G ++ IR SGA V +++ G E+ V I GT SQVQTA QL+Q ++
Sbjct: 339 EIIGVRGENVELIRSVSGAVVVLEKI-GNGQEVRVMIEGTPSQVQTAHQLVQEALS 393
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 228/427 (53%), Gaps = 38/427 (8%)
Query: 69 TEDQVPEDHVP--EDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGW 126
+ D PE+H P E VP +Q P P +S E++ G +WPG+
Sbjct: 32 SSDSEPEEHPPALEPWVPSPETEPEQHPPVPAPTNSASTEEE--------GEFRPRWPGF 83
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTT-ERAVMISAKEEP 185
PG SVFR++V KVG +IGR+GE I+++ EETRAR+++LD G ++ V+ISA EE
Sbjct: 84 PGASVFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLISATEET 143
Query: 186 ESSLPPAMDGLLRVHKRI--VDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
++ L PAMD +++ K + ++G+++ + + S S +LLVP QA LIGKQG
Sbjct: 144 QAELAPAMDAAIKIFKHVNEIEGINASVTFSASAPE-ICSARLLVPKEQAAHLIGKQGIM 202
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+KSIQE + +R++ +DL + + D+R+VE++G + A++ + LRKFLVD S+
Sbjct: 203 IKSIQETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKFLVDHSV 262
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
+ LFE Q D Q N +P R +D
Sbjct: 263 LHLFERKNQAIAHAQDISKENQV----------------SNDYALPVSRD----LLLSDG 302
Query: 364 PPPMEKQPHQGISAYGREAPV-NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
P+ + ++ +S YGR+ V + + S T S+I ++TQ M+IPL AD +IG G
Sbjct: 303 QSPLSPKGNRYLS-YGRDPSVCDPYSSQIRHPTESLIKKITQTMKIPLPQADEIIGVGGR 361
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA--EAAAPSQAQM 480
+I++IR SGA V ++ET E+ V I G++SQV TA QL+Q + A P+++
Sbjct: 362 NIAHIRSVSGAIVVLEETGDYLNEVLVTIQGSSSQVHTAHQLVQVILLGDREAPPTRSSY 421
Query: 481 GASADQG 487
D G
Sbjct: 422 NNDLDTG 428
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 202/356 (56%), Gaps = 58/356 (16%)
Query: 122 KWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP--PGTTERAVMI 179
+WPGWPG SVFR++VPA KVG IIGR+G+ IK++ +ETRAR+++LD P G R V++
Sbjct: 90 RWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLV 149
Query: 180 SAKEEPESSLPPAMDGLLRVHKRI--VDGLDSDSSH---APSGTGGKVSTKLLVPASQAG 234
SA+EE E+ L PAM+ +++ K I ++ ++SD + AP + S +LLVP +QA
Sbjct: 150 SAREEVEAELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEIS----SVRLLVPFAQAL 205
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+IGKQG T+KSIQE++ VR++ ++L +R+VE+ G + V A++L+ L
Sbjct: 206 HVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLL 265
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQA 354
RKFLVD ++ LFE NP++ P QS G P+G YGH+P + P
Sbjct: 266 RKFLVDHGVLHLFERK----NPEVAQ--PQQSRGNPKG----SRFLYGHDPSFHAP---- 311
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
Y R+ +Q S+IT++T+ MQIPL+
Sbjct: 312 -----------------------YSRDL---------SQPADSLITKITRTMQIPLADVG 339
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
+IG G ++ IR SGA V +++ G E+ V I GT SQVQTA QL+Q ++
Sbjct: 340 EIIGVRGENVELIRSVSGAVVVLEKI-GNGQEVRVMIEGTPSQVQTAHQLVQEALS 394
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 155/233 (66%), Gaps = 7/233 (3%)
Query: 109 ENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG 168
E+ N + E K+PGWPG SVFRML+PAQKVG IIG KGE ++++ EETRA ++I+ G
Sbjct: 34 EDSGNTTSSAGESKYPGWPGTSVFRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGG 93
Query: 169 PPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLV 228
E+AV+I +E+PE LPPAMD LLRV+++ ++ D G+ G + ++LV
Sbjct: 94 HLCAAEQAVIIFGREQPEEPLPPAMDALLRVYQQTINDESLD-----VGSDGVIVRRILV 148
Query: 229 PASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAME 288
P+ QA SLIG+ G + SI EAS +RVL DLP AL++DRVVE+ G + VHKA+E
Sbjct: 149 PSEQAESLIGEHGVMINSIMEASQTDIRVLDG-DLPPVALEEDRVVEIWGLPARVHKALE 207
Query: 289 LIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGY 341
L+ SHLRK+LVDRS+IPLF+ H+ MP +D +PP P+G PGY
Sbjct: 208 LVASHLRKYLVDRSVIPLFDRHVPMPILHVD-VPPCHYIDYPEGPVHPVSPGY 259
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Query: 364 PPPMEKQPHQGISAYGREAPVNVH-GSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
P +E H +SA G E P+ +H ++++ S + +QV ++MQ+P+ YA+AVIG AG
Sbjct: 434 PTTVENLLHCRVSACGPETPLPLHLAATSSTSRSTAASQVKKKMQVPIFYAEAVIGPAGE 493
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGT-ASQVQTAQQLIQNFMAEAAAPS 476
I YIRR+S + + I + G M++EI+G A+ V TA+QLI+NFMAEAAA S
Sbjct: 494 RIEYIRRTSRSNILISNSDGA---MSIEITGNAATDVLTAEQLIKNFMAEAAAAS 545
>gi|110349919|emb|CAJ19273.1| putative RNA binding protein [Solanum commersonii]
Length = 184
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/185 (62%), Positives = 141/185 (76%), Gaps = 10/185 (5%)
Query: 289 LIGSHLRKFLVDRSIIPLFEMHMQMPNPQM-DHIPPP---QSWGPPQGLPP--SGGPGYG 342
+I HLRKFLVDRS+I LFE MQMPN ++PPP Q WGPP P +GGPGYG
Sbjct: 1 MIAGHLRKFLVDRSVIGLFEKLMQMPNAHAHQNMPPPGPTQPWGPPPSSFPMSAGGPGYG 60
Query: 343 HNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQV 402
N QYM PPRQ ++Y+P D+ +KQPHQG YGR+A V HG NAQ S++++V
Sbjct: 61 ANHQYMLPPRQFDNYFPRVDMH--QDKQPHQGPPVYGRDASVGAHG--NAQPQQSIVSKV 116
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
TQ +QIPLSYADAVIG +G++ISYIRR+SGAT+ +QETRGVPGEMTVEI+G+ASQVQTAQ
Sbjct: 117 TQNIQIPLSYADAVIGASGSNISYIRRASGATIAVQETRGVPGEMTVEINGSASQVQTAQ 176
Query: 463 QLIQN 467
QL+Q+
Sbjct: 177 QLVQD 181
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 173/290 (59%), Gaps = 38/290 (13%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
E K+PGWPG +VFRML+PAQKVG+IIG KGE ++++ EETRA ++I+ G E+AV+I
Sbjct: 45 ESKYPGWPGTTVFRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVII 104
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
+E+ + LPPAMD LLRV+++ + D LD G + ++L P+ QA SLI
Sbjct: 105 FGREQLDEPLPPAMDALLRVYQQTINNDSLD-------VGPDNVIVRRILAPSEQAASLI 157
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
G+ G + SI EAS +RVL +DLP AL++DRV+E+ G +GV+KA+EL+ SHLRK+
Sbjct: 158 GEHGVMINSIMEASQTDIRVLD-DDLPPVALEEDRVIEIWGSPAGVYKALELVASHLRKY 216
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGY---------------- 341
LVDRS+IPLF+ ++ MP MD +PP P+G PGY
Sbjct: 217 LVDRSVIPLFDRYVPMPILHMD-MPPCHYIDYPEGPVHPVSPGYHSVSTENLQHERWIGT 275
Query: 342 ----GHNPQYMPPPRQAESYYPPADLPPPMEKQ-----PHQGISAYGREA 382
G +P M R A+++ + P P + P+ ISAYG EA
Sbjct: 276 SYLRGRHP--MGNLRHADTFEYRWEAPTPFRRYRSVTPPNHAISAYGPEA 323
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Query: 364 PPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI--TQVTQQMQIPLSYADAVIGTAG 421
P +E H +SA G EA + +H + + ++ S + +QV ++MQ+P+ YA+AVIG G
Sbjct: 425 PTTVENLLHCRVSACGPEASLPLHLAVTSSTSRSTVVASQVKKKMQVPIFYAEAVIGPTG 484
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGT-ASQVQTAQQLIQNFMAEAAAPS 476
I YIRR+S +++ I + G M +EI+G+ A+ V TA+QLI+NFMAEAAA S
Sbjct: 485 ERIEYIRRTSRSSILISNSEGT---MYIEITGSAATDVLTAEQLIKNFMAEAAAAS 537
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/404 (33%), Positives = 210/404 (51%), Gaps = 67/404 (16%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERA 176
G WPG+PG SVFR++V KVG +IGR+GE IK++ E TRAR+++LD G + R
Sbjct: 81 GKKATPWPGFPGASVFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRI 140
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRI--VDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
V+ISA EE ++ L PAMD +R+ K + ++G++ D + SG S +LLVP +Q
Sbjct: 141 VLISATEETQAELAPAMDAAVRIFKHVNDIEGINPDFTLPVSGP-EICSARLLVPKAQGR 199
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
LIGKQG T++ +QE++ +R++ ++L + ++R+VE+ G + V A++ + L
Sbjct: 200 HLIGKQGTTIQLMQESTGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLL 259
Query: 295 RKFLVDRSIIPLFEMHMQ-----MPNPQMDHIPPPQSWGPPQGL---------PPSGGP- 339
R+FLVD S++ LFE + + + + + + Q L P+GG
Sbjct: 260 RRFLVDHSVLHLFERKNEEVAEVQNSSKENQVTNDYALVVNQDLLLSDSRSHHNPNGGRY 319
Query: 340 -GYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSM 398
YGH+P P Y R+ + T S+
Sbjct: 320 LSYGHDPSVCDP---------------------------YSRDI---------RRPTVSL 343
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
I+++TQ M+IPL A+ +IG G +I++IR SGA V ++ET E+ V I GT+SQV
Sbjct: 344 ISKITQTMRIPLPQAEEIIGVRGQTIAHIRSVSGAMVVLEETGNYLDEVLVSIEGTSSQV 403
Query: 459 QTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
QTA QLIQ + P P++ YG+P + P
Sbjct: 404 QTAHQLIQEVLLGNGEP------------LPPWSRRYGNPDAGP 435
>gi|225429818|ref|XP_002280789.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 420
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 199/360 (55%), Gaps = 39/360 (10%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
+KWPGWPG++ FR++VP VGSIIGR+G+ IK+I E T ARI ++ P GTT+ V+IS
Sbjct: 18 EKWPGWPGQNAFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLIS 77
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGL---DSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
AKE+P L PAM+ ++ V KR V GL D + + + S LV SQA S+I
Sbjct: 78 AKEQPHLRLSPAMEAVIEVFKR-VTGLYPIDGNGMCSKASEVKLSSVTFLVGYSQALSII 136
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
GK+G V++I+E+S V +L +P + D+R++++ G V AME + HLR +
Sbjct: 137 GKEGSRVRAIEESSGTTVGIL--SRVPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLRLY 194
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY 357
LVD S+IP F + Q D QS P H P A+S
Sbjct: 195 LVDSSVIPAFSEKCKTGISQAD-----QSLSLHHSTP-------AHQP-------GADSM 235
Query: 358 Y--PPADLPPPME-KQPHQGISAYGRE-----APVNVHGSSNAQSTPSMITQVTQQMQIP 409
Y P +E K P S Y +E P+ S+ + P+ Q T++++IP
Sbjct: 236 YSLPLLGHEAKVEAKIPSSYSSLYAQEPVLGGLPLR---RSDRAAAPA---QRTERIKIP 289
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
S A +IG AG +I +IRR+SG+ +TI+E R +P E +E+ GT SQ+QTAQQLI+ +
Sbjct: 290 FSAAKDIIGIAGETIDHIRRTSGSIITIEEDRSLPDEYILEVRGTTSQLQTAQQLIEELL 349
>gi|218187184|gb|EEC69611.1| hypothetical protein OsI_38985 [Oryza sativa Indica Group]
Length = 453
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/287 (47%), Positives = 175/287 (60%), Gaps = 46/287 (16%)
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLG----------------- 259
G G+ ++LVPA + G++IG++G +K + E S ++VL
Sbjct: 110 GWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRASFDYRMKI 169
Query: 260 --------AEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
+E +P AL DDRVVE+ G+ VHKA+ELI SHLRKFLVDRS++PLFEM M
Sbjct: 170 PVKKLHMLSESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRKFLVDRSVLPLFEMQM 229
Query: 312 QMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN-----------PQYMPPPRQAESYYPP 360
++ N + Q PPQ P G+ N PQ+MPP + + +Y P
Sbjct: 230 KVHNAHRE-----QPMPPPQTWGPPPPWGHPSNVPPGGPGYGGNPQFMPP--RPQDHYYP 282
Query: 361 ADLPPPMEKQPHQGISAYGREA-PVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGT 419
PP+EKQPH GIS+YGR+A P +S Q P +Q+T MQ+PLSYADAVIG
Sbjct: 283 PPDVPPVEKQPHYGISSYGRDAPPTGAPPASGNQHPPHGSSQITHSMQVPLSYADAVIGA 342
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
AGASISYIRR SGAT++IQE GVPGEMTVEISG+ASQVQTAQQLI+
Sbjct: 343 AGASISYIRRHSGATISIQE--GVPGEMTVEISGSASQVQTAQQLIK 387
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 60/71 (84%), Gaps = 5/71 (7%)
Query: 106 EKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 165
E+Q N V + EKKWPGWPGESVFR+LVPAQKVG++IGRKGEFIKK+ EE+RARIK+
Sbjct: 96 EQQANAV-----TDEKKWPGWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKV 150
Query: 166 LDGPPGTTERA 176
LDGPPG +RA
Sbjct: 151 LDGPPGVPDRA 161
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 148/217 (68%), Gaps = 16/217 (7%)
Query: 110 NEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP 169
++ N + G E ++PGWPG +VFRML+ + KVG+IIG+KGE ++++ EET+A ++++ G
Sbjct: 44 DDTNCSAG--ENRYPGWPGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGH 101
Query: 170 PGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVD----GLDSDSSHAPSGTGGKVSTK 225
ER V+I AKE+P+ +PPAMD LLRV++ IV+ G+ SDS+ V T+
Sbjct: 102 FAAAERVVLIFAKEQPDEPIPPAMDALLRVYQNIVNDDGLGMGSDSA---------VVTR 152
Query: 226 LLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHK 285
+L+P+ QA +LIG+QG + I+EAS +RVL +LP AL +DR+VE+ G + V K
Sbjct: 153 ILIPSEQALNLIGEQGSMINLIEEASQTDIRVLDC-NLPPAALDEDRIVEIWGQPTRVRK 211
Query: 286 AMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIP 322
A+EL+ HLRK+LVDRS+IPLF+ H+ M +D P
Sbjct: 212 ALELVARHLRKYLVDRSVIPLFDPHVPMTTSHVDTSP 248
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 364 PPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGAS 423
P +E H +SA G + + V S +P++ +QV ++MQ+P+ YA+A+IG GA
Sbjct: 434 PATVENLLHCRVSACGPDVLLPVVVPSLTSKSPAITSQVKEKMQVPIFYAEAIIGPTGAR 493
Query: 424 ISYIRRSSGATVTIQETRGVPGEMTVEISG-TASQVQTAQQLIQ 466
I YIRR+S +++ I + M+++I+G +A+ VQTA+ LI+
Sbjct: 494 IEYIRRASRSSILINDLDD--SLMSIDITGSSATDVQTAEHLIK 535
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 174/300 (58%), Gaps = 22/300 (7%)
Query: 90 EDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKG 149
ED+V +V E +++ N + G E + PGWPG SVFRML+PA KVG++IG G
Sbjct: 22 EDEVIWRMV-EQGATDDEECGGTNCSAG--ENRDPGWPGTSVFRMLIPATKVGAVIGHSG 78
Query: 150 EFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIV--DGL 207
E ++++ EET+A ++++ G ERAV+I AKE+P+ PPA+D LLRV++ I+ DGL
Sbjct: 79 ERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPPAIDALLRVYECIINDDGL 138
Query: 208 DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFA 267
D ++ V ++L P+ QA SLIG QG + I++AS + V+ DLP A
Sbjct: 139 DVRYNNI-------VVARILTPSEQAASLIGDQGSVINYIKKASKTNIHVIDG-DLPPVA 190
Query: 268 LQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSW 327
L+DD ++E+ G + VH+A+EL+ HLRK+LV RS+IPLF+ H+ +P +D +PP
Sbjct: 191 LEDDMIIEIWGLPARVHQALELVACHLRKYLVHRSVIPLFDPHVSIPISPVD-MPPFHYS 249
Query: 328 GPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP---PPMEKQPHQGISAYGREAPV 384
+GL PGY Y + +P D PME H I Y +EAPV
Sbjct: 250 DHHEGLLHEASPGY-----YSLYAEAFQLEHPWTDTSYSRYPMENFTHADIFEYRQEAPV 304
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 10/124 (8%)
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
+E H +SA E NV S +P++ +QV +MQ+P+ YA+AVIG GA I Y
Sbjct: 435 VENLQHCRVSACAPEELPNVVVPSLTSQSPAVTSQVIMKMQVPIFYAEAVIGPTGARIDY 494
Query: 427 IRRSSGATVTIQETRGVPGEMTVEISGT-ASQVQTAQQLIQNFMAEAAAPSQAQMGASAD 485
IR++SG++V I++ M++EI+G+ A+ VQ A+QLI+NFMAEAAA AS D
Sbjct: 495 IRQASGSSVVIKDLDD--SAMSIEITGSAATDVQIAEQLIKNFMAEAAA-------ASPD 545
Query: 486 QGYN 489
Y+
Sbjct: 546 HSYD 549
>gi|218189965|gb|EEC72392.1| hypothetical protein OsI_05673 [Oryza sativa Indica Group]
gi|222622089|gb|EEE56221.1| hypothetical protein OsJ_05205 [Oryza sativa Japonica Group]
Length = 442
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 178/338 (52%), Gaps = 50/338 (14%)
Query: 122 KWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTT-ERAVMIS 180
+WPGWPG SVFR++V KVG +IGR+G+ IK++ E+TRAR+++L+ R V+IS
Sbjct: 89 RWPGWPGASVFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLIS 148
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG-GKVSTKLLVPASQAGSLIGK 239
A EE ++ LPPAMD +++ I D + SG+ K S KLLVP++QA LIGK
Sbjct: 149 ATEESQAELPPAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQATHLIGK 208
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
QG +KSIQE + V+++ +L + + D+R+V++ G V A++ + LRKFLV
Sbjct: 209 QGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLGVLRKFLV 268
Query: 300 DRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYP 359
D ++ LFE Q G H+
Sbjct: 269 DHGVLHLFERKNQ-------------------------AVGEAHDNS------------- 290
Query: 360 PADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGT 419
E Q +Q S Y PVN TP + ++TQ MQIPL +A+ +IG
Sbjct: 291 -------KENQVNQVASDY--RLPVNKDILLPDHRTP-LNPKITQTMQIPLPFAEEIIGA 340
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQ 457
G +ISYIR SGA V ++E+R P E+ V I G++SQ
Sbjct: 341 RGQNISYIRSVSGAVVDLEESRDYPNEVLVMIKGSSSQ 378
>gi|41053065|dbj|BAD08009.1| putative KH domain protein [Oryza sativa Japonica Group]
Length = 458
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 178/354 (50%), Gaps = 66/354 (18%)
Query: 122 KWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL--------------- 166
+WPGWPG SVFR++V KVG +IGR+G+ IK++ E+TRAR+++L
Sbjct: 89 RWPGWPGASVFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVDSD 148
Query: 167 --DGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG-GKVS 223
D T V+ISA EE ++ LPPAMD +++ I D + SG+ K S
Sbjct: 149 SNDFIAKVTFEMVLISATEESQAELPPAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCS 208
Query: 224 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGV 283
KLLVP++QA LIGKQG +KSIQE + V+++ +L + + D+R+V++ G V
Sbjct: 209 AKLLVPSAQATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKV 268
Query: 284 HKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGH 343
A++ + LRKFLVD ++ LFE Q G H
Sbjct: 269 LHALKSVLGVLRKFLVDHGVLHLFERKNQ-------------------------AVGEAH 303
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT 403
+ E Q +Q S Y PVN TP + ++T
Sbjct: 304 DNS--------------------KENQVNQVASDY--RLPVNKDILLPDHRTP-LNPKIT 340
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQ 457
Q MQIPL +A+ +IG G +ISYIR SGA V ++E+R P E+ V I G++SQ
Sbjct: 341 QTMQIPLPFAEEIIGARGQNISYIRSVSGAVVDLEESRDYPNEVLVMIKGSSSQ 394
>gi|218184511|gb|EEC66938.1| hypothetical protein OsI_33565 [Oryza sativa Indica Group]
Length = 800
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 174/332 (52%), Gaps = 53/332 (15%)
Query: 90 EDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKG 149
ED+V +V E +++ N + G E + PGWPG SVFRML+PA KVG++IG G
Sbjct: 203 EDEVIWRMV-EQGATDDEECGGTNCSAG--ENRDPGWPGTSVFRMLIPATKVGAVIGHSG 259
Query: 150 EFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIV--DGL 207
E ++++ EET+A ++++ G ERAV+I AKE+P+ PPA+D LLRV++ + DGL
Sbjct: 260 ERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPPAIDALLRVYECTINDDGL 319
Query: 208 DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE------ 261
D ++ V ++L P+ QA SLIG QG + I++AS + V+G
Sbjct: 320 DVRYNNI-------VVARILTPSEQAASLIGDQGSVINYIKKASKTNIHVIGNFLTLMHL 372
Query: 262 --------------------------DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
DLP AL+DD ++E+ G + VH+A+EL+ HLR
Sbjct: 373 LEPLVPSIDKFDISGLQLSIYTDADGDLPPVALEDDMIIEIWGLPARVHQALELVACHLR 432
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
K+LV RS+IPLF+ H+ +P +D +PP +GL PGY Y +
Sbjct: 433 KYLVHRSVIPLFDPHVSIPISPVD-MPPFHYSDHHEGLLHEASPGY-----YSLYSEAFQ 486
Query: 356 SYYPPADLP---PPMEKQPHQGISAYGREAPV 384
+P D PME H I Y +EAPV
Sbjct: 487 LEHPWTDTSYSRYPMENFTHADIFEYRQEAPV 518
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
+E H +SA E NV S +P++ +QV +MQ+P+ YA+AVIG GA I Y
Sbjct: 649 VENLQHCRVSACAPEELPNVVVPSLTSQSPAVTSQVIMKMQVPIFYAEAVIGPTGARIDY 708
Query: 427 IRRSSGATVTIQETRGVPGEMTVEISGT-ASQVQTAQQLIQNFMAEAAAPS 476
IR++SG++V I++ M++EI+G+ A+ VQ A+QLI+NFMAEAAA S
Sbjct: 709 IRQASGSSVVIKDLDD--SAMSIEITGSAATDVQIAEQLIKNFMAEAAAAS 757
>gi|242060324|ref|XP_002451451.1| hypothetical protein SORBIDRAFT_04g002170 [Sorghum bicolor]
gi|241931282|gb|EES04427.1| hypothetical protein SORBIDRAFT_04g002170 [Sorghum bicolor]
Length = 508
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 196/410 (47%), Gaps = 74/410 (18%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P WPG +VFR++VP KV ++SAKE
Sbjct: 96 PRWPGTNVFRLVVPTDKV------------------------------------LVSAKE 119
Query: 184 EPESSLPPAMDGLLRVHKRI--VDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
E E+ + PAM+ +++ K I ++ ++SD + + S + S +LLVP QA LIGKQG
Sbjct: 120 EVEAEMSPAMNAAIKIFKHINEIEEINSDGTLSASASD-ICSVRLLVPFEQAVHLIGKQG 178
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
T+KSI+E++ VR+ ++L D+R+VE+ G + V A++ + LRKFLVD
Sbjct: 179 VTIKSIEESTGTTVRIRDEDELLSHETVDERIVEIRGASLKVLNALKSVLELLRKFLVDH 238
Query: 302 SIIPLFEMHMQ-MPNPQ----------MDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPP 350
++ LFE Q + PQ D + Q G P S YGH+P + P
Sbjct: 239 GVLHLFERKNQEVVQPQDASNYPLAVNQDFLLSDQR---SHGDPISSRLLYGHDPSFCGP 295
Query: 351 PRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNV-HGSSNAQSTPSMITQVTQQMQIP 409
+S + P YGR+ + + +Q T S+IT++T+ MQ+P
Sbjct: 296 HHATDSL-----MIQQSRANPKGSRFLYGRDPSFHDPYSRDLSQPTDSLITKITRTMQVP 350
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQN-- 467
L+YA+ VIG G +I YIR SGA V ++E G E+ V I GT SQVQTA QL+Q+
Sbjct: 351 LAYAEDVIGVRGENIEYIRSVSGAVVALEEI-GDYQEVQVMIEGTPSQVQTAHQLVQHHW 409
Query: 468 -------FMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNPGHAGHAGG 510
+M + AP + S + GY S +PPS + G
Sbjct: 410 SPRTQVIYMDDNVAPLE-----SKNSGYLEVISGDRAPPSRSSYYNSEGA 454
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 116/182 (63%), Gaps = 11/182 (6%)
Query: 89 PEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRK 148
P +Q + P DS E + G ++KKWPGWPG+ VFR++VP KVGSIIGRK
Sbjct: 45 PSNQDYSSVPPSDSAAHEPSNH-----TGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRK 99
Query: 149 GEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLD 208
G+ IKK+ EETRARI++LDG GT +R V+IS KEE ES L PAMD ++RV KR V GL
Sbjct: 100 GDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKR-VSGLS 158
Query: 209 SDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVL--GAEDLPVF 266
+ A + S +LLV ++QA +LIGKQG +KSIQE++ VRVL G V
Sbjct: 159 ENEDEAKASF---CSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGGMLSFSVL 215
Query: 267 AL 268
L
Sbjct: 216 CL 217
>gi|255559157|ref|XP_002520600.1| conserved hypothetical protein [Ricinus communis]
gi|223540199|gb|EEF41773.1| conserved hypothetical protein [Ricinus communis]
Length = 161
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 101/137 (73%), Gaps = 2/137 (1%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
TE KWPGWPG++V+R++VP KVGSIIGRKGE IK++ ETRARI+ILDGPP ++R V+
Sbjct: 16 TEGKWPGWPGDNVYRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVL 75
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
IS KEEPE++L PA+D +LRV KR+ + D++ + S +LLV +SQA +L
Sbjct: 76 ISGKEEPEAALSPAIDAVLRVFKRVSGPSAGEGDATGSAVAGAAFSSVRLLVASSQAINL 135
Query: 237 IGKQGGTVKSIQEASNC 253
IGKQG T+KSI E+ C
Sbjct: 136 IGKQGSTIKSILESRRC 152
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 178/357 (49%), Gaps = 46/357 (12%)
Query: 124 PGWPGES-VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK 182
P + GE VFR+L P +K+GS+IGR G IK + ++ A+IKI D PG+ ER ++ISA
Sbjct: 15 PSFSGEELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISAN 74
Query: 183 EEPESSLPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
E E +L PA + LL + +IVD G D D G ++TKLL+P++Q G L+GK G
Sbjct: 75 EVLEDNLSPAQEALLHIQSQIVDLGPDKD---------GVITTKLLIPSNQTGCLLGKGG 125
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL--- 298
+ +++ + +R+L EDLP AL D +V++VGD A+ + S LR F+
Sbjct: 126 AIISEMRKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLRSFIHRE 185
Query: 299 --VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMP---PPRQ 353
+ + +++ P +S+ P G G+ + +P P ++
Sbjct: 186 IGISGPFLSSSSAPDPSSKRRLEPSSPGRSYSP--------GLGFQAGSRSLPDAWPSKE 237
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+LP E+ QG P + ST ++T+ T ++ IP
Sbjct: 238 ISGR----NLPEYDERATKQG-------GP-----KGSGISTAGLVTKTTVEVVIPEHAI 281
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPG-EMTVEISGTASQVQTAQQLIQNFM 469
+I +G ++ I + SGA V + E R PG + +EISGT Q AQ L+Q F+
Sbjct: 282 APLIANSGKGVAQIAQISGAKVNLLEVR--PGSDKVIEISGTPEQTHAAQGLLQAFI 336
>gi|449523878|ref|XP_004168950.1| PREDICTED: uncharacterized protein LOC101231198, partial [Cucumis
sativus]
Length = 323
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 129/213 (60%), Gaps = 22/213 (10%)
Query: 262 DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHI 321
++P +A D+R+VE+ G++ V KA+E + HLRKFLVD S++PLFE P Q
Sbjct: 62 EMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQ- 120
Query: 322 PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPH-------QG 374
++W L + + +Y P ++ ES + ++++ H G
Sbjct: 121 --TETWADKSSLLTASQSII--SAEYAPSTKR-ESLF--------LDREAHFDSHISSSG 167
Query: 375 ISAYGREAPV-NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGA 433
IS YG++ + + S +S ++TQVTQ MQIPLSYA+ +IG G +I++IRR+SGA
Sbjct: 168 ISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGA 227
Query: 434 TVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+TIQE+RG+P E+TVEI GT+SQVQ AQQLIQ
Sbjct: 228 ILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ 260
>gi|219887089|gb|ACL53919.1| unknown [Zea mays]
gi|414868823|tpg|DAA47380.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 217
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 125/187 (66%), Gaps = 15/187 (8%)
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT 403
NP YMPP Q P PP+EKQPH GIS+YGR+AP + + Q+ S +QVT
Sbjct: 37 NPHYMPPRPQENY--YPPPDVPPVEKQPHYGISSYGRDAPPSAPPGNQNQAHGS--SQVT 92
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
MQ+PLSYADAVIG AGASISYIRR SGAT++IQE G PGEMTVEI+G+ASQVQTAQQ
Sbjct: 93 HSMQVPLSYADAVIGAAGASISYIRRHSGATISIQE--GAPGEMTVEITGSASQVQTAQQ 150
Query: 464 LIQNFMAEAA---APSQAQMGASADQGYNPY----ASMYGSPPSNPGHAGHAGG-YGSV- 514
LI+NFMAEA+ P+ G D GY Y + YGSPP P A H GG YG+
Sbjct: 151 LIKNFMAEASPQGPPAPGPHGQPVDTGYGSYPPYGGASYGSPPGAPAPAPHNGGSYGAAP 210
Query: 515 YGSNYGY 521
Y S+YGY
Sbjct: 211 YSSSYGY 217
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 172/358 (48%), Gaps = 30/358 (8%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFR+L P++K+G+IIG+ FI+ + EET A+I + D PG ER +++SA E P+
Sbjct: 286 ELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDD 342
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
L PA + + + D L D T +V T+LLVP++ G L+GK G + ++
Sbjct: 343 LSPAQEAVFHIQ----DKLRDDGGE----TSERVVTRLLVPSNHVGCLLGKGGNIISEMR 394
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV--------- 299
++ I+RVL E LP+ AL +D VV+V+G+ A+ I S LR L
Sbjct: 395 NSTRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANLYREKTDRSDD 454
Query: 300 ---DRSIIPLFEMHMQMPNPQMDHIP-PPQSWGPPQGL--PPSGGPGYGHNPQYMPPPRQ 353
RS PL +Q P P P SW Q L PPS + R
Sbjct: 455 YGYQRSTSPLSNFGLQASQPPGIQAPRSPPSWLLQQVLIPPPSFKSRLTSFLPCLDRKRS 514
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGR-EAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
+ + L EK G ++G + P V S + Q S++T + IP
Sbjct: 515 LQWFATAYKLCWNREKL-WLGRRSFGLADWPYQV--SHSIQRHLSVVTSTKIDVLIPEVT 571
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
AV+G G +++ I + SGA VT+ + G+ +EISGT Q A+ +++ F A
Sbjct: 572 FSAVLGQNGDNLTQISKMSGAKVTLADGCTATGDRLIEISGTPDQTNIAKTVVEAFAA 629
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 39/202 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEP----- 185
+FR+L PA ++GS+IG+ G IK + ++T A+IKI D PG+ ER ++I A +
Sbjct: 1 LFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDE 60
Query: 186 ---------------------------ESSLPPAMDGLLRVHKRIVDG------LDSDSS 212
PA L +VH RI+D LD DS
Sbjct: 61 DYPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLD-DSD 119
Query: 213 HAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDR 272
KV T++LVP +Q G L+GK+G ++ ++E + +R+L E LPV AL D
Sbjct: 120 SVEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDE 179
Query: 273 VVEVVGDASGVHKAMELIGSHL 294
VV+VVGD V +A+ I + L
Sbjct: 180 VVQVVGDRPSVKRALNAISTRL 201
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 168/350 (48%), Gaps = 41/350 (11%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFR+L P++K+G+IIG+ FI+ + EET A+I + D PG ER +++SA E P+
Sbjct: 346 ELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDD 402
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
L PA + + + ++ D D T +V T+LLVP++ G L+GK G + ++
Sbjct: 403 LSPAQEAVFHIQDKLRD----DGGE----TSERVVTRLLVPSNHVGCLLGKGGNIISEMR 454
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
++ I+RVL E LP+ AL +D VV+V+G+ A+ I S LR
Sbjct: 455 NSTRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRA-----------N 503
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
++ + + D+ G S P Q PP PP+ L E
Sbjct: 504 LYREKTDRSDDY-----------GYQRSTSPLSNFGLQASQPPGIQAPRSPPSWLLQQTE 552
Query: 369 KQPHQGI----SAYGREAPVNVHGSSNAQST----PSMITQVTQQMQIPLSYADAVIGTA 420
+ + G+ S G E + G +A T S++T + IP AV+G
Sbjct: 553 RGAYNGLPRLTSYAGIERSYGLAGDRSALPTGLTNLSVVTSTKIDVLIPEVTFSAVLGQN 612
Query: 421 GASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
G +++ I + SGA VT+ + G+ +EISGT Q A+ +++ F A
Sbjct: 613 GDNLTQISKMSGAKVTLADGCTATGDRLIEISGTPDQTNIAKTVVEAFAA 662
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 39/201 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE-------- 183
FR+L PA ++GS+IG+ G IK + ++T A+IKI D PG+ ER ++I A +
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 184 ------------------------EPESSLPPAMDGLLRVHKRIVDG------LDSDSSH 213
PA L +VH RI+D LD DS
Sbjct: 122 YPAGSGGGSAAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLD-DSDS 180
Query: 214 APSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRV 273
KV T++LVP +Q G L+GK+G ++ ++E + +R+L E LPV AL D V
Sbjct: 181 VEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEV 240
Query: 274 VEVVGDASGVHKAMELIGSHL 294
V+VVGD V +A+ I + L
Sbjct: 241 VQVVGDRPSVKRALNAISTRL 261
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 166
V RMLVP +VG ++G+KG I+++ EET ++I+IL
Sbjct: 190 VTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRIL 225
>gi|147807333|emb|CAN73004.1| hypothetical protein VITISV_044058 [Vitis vinifera]
Length = 122
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 95/122 (77%), Gaps = 6/122 (4%)
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
MQ+PLSYADAVIG +G +ISY+RR+SGAT+ I+ET+GVPGEMTVEI+G+ SQVQTAQQLI
Sbjct: 1 MQVPLSYADAVIGASGVNISYVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTAQQLI 60
Query: 466 QNFMAEAAAPSQAQMGASADQGYNPY---ASMYGSPPSNP-GHAG-HAGG-YGSVYGSNY 519
QNFMAEAA+ + G + QGYNP+ ++ S PSN H G AGG YGSVYGS+
Sbjct: 61 QNFMAEAASSTLNLAGGAISQGYNPFPTHGAVSTSQPSNVIEHLGPSAGGSYGSVYGSHS 120
Query: 520 GY 521
GY
Sbjct: 121 GY 122
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 172/385 (44%), Gaps = 58/385 (15%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VF++L +KVGS+IG+ G I+ + ET A IKI D P + ER V+ISA+E E
Sbjct: 327 EVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVISARENLEQK 386
Query: 189 LPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
PA D ++RVH RI + G + G V +LLV + Q G L+GK G + +
Sbjct: 387 HSPAQDAVIRVHCRIAEIGFE---------PGAAVVARLLVHSQQIGCLLGKGGIIISEM 437
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+ A+ +R+ E +P Q+D +V+V+G V A+ I S +R+ +I PL
Sbjct: 438 RRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFRITSRIRE-----TIFPLK 492
Query: 308 EMHMQMPNP----QMDHIPPPQSW---------------GPPQGLPPSGGPG-------- 340
+ P IPPP G P G+ S PG
Sbjct: 493 PSISNVNGPPYMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPHGIDRSAVPGHPLDHQSS 552
Query: 341 YGHNPQYMPPPRQAESYY----------PPADLPPPMEKQPHQGISAYGREAPV------ 384
+ H + P + Y PP D P + QG+S R V
Sbjct: 553 FSHGVDRIGPSNLDRAPYPYGGDRPGHGPPFDRPSSSPRMWTQGVSGNLRGTDVGSGSLA 612
Query: 385 NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
+ +G + S IT T ++ +P + V G ++++ IR+ SGA V IQ+ R
Sbjct: 613 SRNGPPGSGSQAPNITTTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVIQDPRTGS 672
Query: 445 GEMTVEISGTASQVQTAQQLIQNFM 469
E V +SGT Q + AQ L+Q F+
Sbjct: 673 SEGVVVVSGTPDQTRAAQSLVQAFI 697
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 35/199 (17%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA---KEEPES 187
+FR+L PA K G +IG+ G I++ E+T A+I+I D G ER ++I A K + E+
Sbjct: 57 LFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREA 116
Query: 188 SL------------------------------PPAMDGLLRVHKRI--VDGLDSDSSHAP 215
S PA L+RV +RI VD +
Sbjct: 117 SAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKE 176
Query: 216 SGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVE 275
V +LL P++Q G ++G+ G V+ I++ S +RVL + +P A D +++
Sbjct: 177 DLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQ 236
Query: 276 VVGDASGVHKAMELIGSHL 294
+ G V KA+ L+ S L
Sbjct: 237 ITGTFPAVRKALLLVSSCL 255
>gi|224131214|ref|XP_002328483.1| predicted protein [Populus trichocarpa]
gi|222838198|gb|EEE76563.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 114/192 (59%), Gaps = 20/192 (10%)
Query: 1 MAEADQGFVEHDGNHDLEQIPENQEVENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTK 60
MAE DQGF EH+ +H ++ + +Q V + V ++++ + V S
Sbjct: 1 MAEVDQGFGEHEIDHGVD-LSADQGVGHPV------DHDLDNAADHGL-DHAVDHSLGHS 52
Query: 61 EQVTEDQLTEDQVPEDHVPEDQVPE------DHVPEDQVPEDI------VPEDSQLQEKQ 108
D T+ + +H + + DH + V DI VPE+ + ++
Sbjct: 53 VDHGLDHATDPGLAVEHDIDHPIDHHVDPSIDHDVDHPVNHDIDHAIDQVPENFEASKQG 112
Query: 109 ENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG 168
++E ++ G +EK+WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG
Sbjct: 113 QDEDTVSGGGSEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG 172
Query: 169 PPGTTERAVMIS 180
PPGTTERAV S
Sbjct: 173 PPGTTERAVSFS 184
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 174/391 (44%), Gaps = 64/391 (16%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE----- 183
E VF++L +KVGS+IG+ G I+ + ET A IKI D P + ER V+ISA+E
Sbjct: 423 EVVFKLLCHFEKVGSLIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISAREACTLT 482
Query: 184 EPESSLPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGG 242
E PA D ++RVH RI + G + G V +LLV + Q G L+GK G
Sbjct: 483 NXEQKHSPAQDAVIRVHCRIAEIGFE---------PGAAVVARLLVHSQQIGCLLGKGGI 533
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRS 302
+ ++ A+ +R+ E +P Q+D +V+V+G V A+ I S +R+ +
Sbjct: 534 IISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFCITSRIRE-----T 588
Query: 303 IIPLFEMHMQMPNP----QMDHIPPPQSW---------------GPPQGLPPSGGPG--- 340
I PL + P IPPP G P G+ S PG
Sbjct: 589 IFPLKPSISNVNGPPYMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPHGIDRSAVPGHPL 648
Query: 341 -----YGHNPQYMPPPRQAESYYP-PADLP---PPMEK---QPH----QGISAYGREAPV 384
+ H + P + YP D P PP ++ P QG+S R V
Sbjct: 649 DHQSSFSHGVDRIGPSNLDRAPYPYGGDRPGHGPPFDRPSSSPRMWTPQGVSGNLRGTDV 708
Query: 385 NVHGSSNAQSTPSM------ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQ 438
G ++ P IT T ++ +P + V G ++++ IR+ SGA V IQ
Sbjct: 709 GSGGLASRSGPPGSGSQAPNITXTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVIQ 768
Query: 439 ETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ R E V +SGT Q + AQ L+Q F+
Sbjct: 769 DPRTGSSEGVVVVSGTPDQTRAAQSLVQAFI 799
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 35/180 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA---KEEPES 187
+FR+L PA K G +IG+ G I++ E+T A+I+I D G ER ++I A K + E+
Sbjct: 57 LFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREA 116
Query: 188 SL------------------------------PPAMDGLLRVHKRI--VDGLDSDSSHAP 215
S PA L+RV +RI VD +
Sbjct: 117 SAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKE 176
Query: 216 SGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVE 275
V +LL P++Q G ++G+ G V+ I++ S +RVL + +P A D +++
Sbjct: 177 DLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQ 236
>gi|242084058|ref|XP_002442454.1| hypothetical protein SORBIDRAFT_08g020260 [Sorghum bicolor]
gi|241943147|gb|EES16292.1| hypothetical protein SORBIDRAFT_08g020260 [Sorghum bicolor]
Length = 352
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 119/177 (67%), Gaps = 8/177 (4%)
Query: 346 QYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQ 405
QYMPPP + + Y P PP+EKQPH GIS+YGR+AP +V + Q+ S +QVT
Sbjct: 183 QYMPPPPRPQESYYPPPDVPPVEKQPHYGISSYGRDAPPSVPPGNQNQAHGS--SQVTHS 240
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
MQ+PLSYADAVIG+AGASISYIRR SGAT++IQE G PGEMTVEI+G+ASQVQTAQQLI
Sbjct: 241 MQVPLSYADAVIGSAGASISYIRRHSGATISIQE--GAPGEMTVEITGSASQVQTAQQLI 298
Query: 466 QNFMAEAAAPSQAQMGASADQGYNPY-ASMYGSPPSNPGHAGHAGGYGSVYGSNYGY 521
+ A A G S+ Y PY + YGSPP P A H GG Y +YGY
Sbjct: 299 KGPPAPAPPAQPVDTGYSS---YPPYGGASYGSPPGAPAPAPHNGGSYGAYPPSYGY 352
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 50/56 (89%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTER 175
+KKWPGWPGESVFR+LVP KVG++IGRKG+FIKK+ EE+RARIK+L+GPP ER
Sbjct: 97 DKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPER 152
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 169/386 (43%), Gaps = 60/386 (15%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFRM+ + VG IIG+ G I+ + +T A +K++D + ER ++ISA+E E
Sbjct: 252 EIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISARENSEMM 311
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA D +LRV+ RI + SS P+ +LLVP+ G L+GK G + ++
Sbjct: 312 HSPAQDAVLRVYSRISEASMDKSSAVPA--------RLLVPSQHIGCLLGKGGSIIAEMR 363
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ +R+ G E +P A ++D +V+V G+ + A+ I +R ++ P
Sbjct: 364 NVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIRDVIIPPKPHPSGG 423
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQ---GLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
M P H P Q PP G+PP P + P + P + PP P
Sbjct: 424 MSPYPPAGSTPHHPSRQDPAPPHHSGGMPPY--PMHPFRPNHPMGPFDVADHRPPGQHPA 481
Query: 366 -PMEKQ-----------------------------------------PHQGISAYGREAP 383
PME P +G++ R+
Sbjct: 482 HPMEHMGADRIPYSYGCEQGGPRPFLEQPSPRTWAPEAQTADAPRSIPDKGLAMDSRKG- 540
Query: 384 VNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGV 443
+V GS N +TP T T ++ IP Y + GT G+ ++ I++ SGA +T+ + +
Sbjct: 541 -SVAGSENQVATP---TSTTTEVVIPCKYIGFICGTNGSDLAEIQKISGAAITVHDPKPG 596
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFM 469
+ +V + G Q + AQ LI F+
Sbjct: 597 DTDASVFVCGDPEQTKKAQSLIHAFI 622
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 129/332 (38%), Gaps = 75/332 (22%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSL 189
+ R+L P+ + ++ AR ++ PP E +++S + P +++
Sbjct: 38 TTLRLLCPSSRAAAL--------------RPARDLHVEHPPVGDEVVLVVSGPDAPAAAV 83
Query: 190 PPAMDGLLRVHKRIVD----GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
RV +R+V G D+ G V ++L Q G ++GK G TV+
Sbjct: 84 --------RVWERVVGHRVGGDDAGEGEEEKEVTGVVGCRMLAAGGQVGCVLGKGGKTVE 135
Query: 246 SIQEASNCIVRVLGAED-LPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
+++ S +RV +D +P ALQ D ++ + G S KA+ L+ + L+
Sbjct: 136 RMRQESGAQIRVFRNKDQVPPCALQGDELIHISGSFSAARKALLLVSTCLQD-------- 187
Query: 305 PLFEMHMQMPNPQMD--HIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
NP+++ + +S+GPP G G G P SY PP
Sbjct: 188 ----------NPRLETSNFSTGRSFGPP-------GSGVGCPPGV--DSHSQRSYLPP-H 227
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ--VTQQMQIPLSYADAVIGTA 420
+P + R NV A P + + +M +IG
Sbjct: 228 IP-----------DYHARNFSSNV-----AAPGPRFFIEQEIVFRMICLNEMVGGIIGKG 271
Query: 421 GASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
GA+I ++ +GA+V + + E + IS
Sbjct: 272 GATIRALQSDTGASVKVIDAVADSDERVIVIS 303
>gi|224123472|ref|XP_002319086.1| predicted protein [Populus trichocarpa]
gi|222857462|gb|EEE95009.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 71/82 (86%), Gaps = 1/82 (1%)
Query: 96 DIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI 155
D VPE+++ KQ ++ + G EK+WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI
Sbjct: 99 DQVPENNEAS-KQGHDEDTVSGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKI 157
Query: 156 VEETRARIKILDGPPGTTERAV 177
VEETRARIKILDGPPGTTERAV
Sbjct: 158 VEETRARIKILDGPPGTTERAV 179
>gi|255580721|ref|XP_002531182.1| conserved hypothetical protein [Ricinus communis]
gi|223529223|gb|EEF31197.1| conserved hypothetical protein [Ricinus communis]
Length = 122
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
TE KWPGWP ++V+R++VP KVGSIIGRKGE IKK+ ETRARI+ILDGPP ++R V+
Sbjct: 16 TEGKWPGWPRDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVL 75
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
IS KEEPE++L PAMD +LRV KR V GL +
Sbjct: 76 ISGKEEPEAALSPAMDAVLRVFKR-VSGLSA 105
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 164/359 (45%), Gaps = 33/359 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
+R+L P ++VG++IG+ G +K + ++T IK++DG + +R ++++ P+ + P
Sbjct: 340 YRLLCPTERVGNVIGKGGAIVKTLQQDTGCDIKVVDGALDSEDRIILVAGPAHPDDRISP 399
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
D + RV RIV A + + LV ++Q G L+GK G + +++++
Sbjct: 400 VQDAVFRVQARIVKA-------AADSKEQNLVARFLVSSNQIGCLLGKGGSIIAEMRKST 452
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
+R+LG E +P A +D+ VV++ G+ V AM I + LR R P H
Sbjct: 453 GAYIRILGKEQIPKCAGEDEEVVQINGEPETVQDAMFQITTRLRHHFF-RDAFPSVNSH- 510
Query: 312 QMPNPQ-MDHIPP-PQSWG----PPQGLPPSGGPGYGHNPQY--MPPPRQAESYYPPA-- 361
NP +D +P P +G P G+ S GP + +P PP
Sbjct: 511 --SNPAFIDRLPSFPSYFGRRELSPPGIYSSLGPSFHKFDALSGIPSLSDLRDDRPPFLH 568
Query: 362 --DLPPPMEKQPHQ---------GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
P +++P G+S + + G S P++IT T ++ +P
Sbjct: 569 RPGAPLLSDRKPWSSQGLVEGGVGLSDFAGAHHRRIAGFGGGNS-PAIITSTTVEVVVPR 627
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ + G G + IR+ S A +TI E + E + ISGT Q AQ LIQ F+
Sbjct: 628 NIVPVICGENGECLKQIRQISDAKITITEPKQGDVETMIIISGTPEQTHAAQSLIQAFV 686
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 56/219 (25%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA----- 181
PG +VFR+L P ++ S++GR G+ + KI EET I++ D PG ER +I
Sbjct: 43 PGYAVFRVLFPVSRIDSLVGRDGDGLSKIREETGVEIRVEDTIPGCDERIAVIGGSNQET 102
Query: 182 ---------------------------KEEPESSLPPAMDG-------------LLRVHK 201
K++ + PP D L V +
Sbjct: 103 EVNPEKKSKEDNKNSEVEENDGDIAKLKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSE 162
Query: 202 RIVD------GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
+I D G D + P+ +LLV +SQ G L+GK G VK + S +
Sbjct: 163 KIFDEEPEADGTDVEGDKLPT-----FILRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQI 217
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
R+L + LP F + +V++ G V KA+EL+ L
Sbjct: 218 RILPRDKLPPFVATNVELVQISGGIDVVKKALELVFQQL 256
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 172/385 (44%), Gaps = 60/385 (15%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFRM++ + VGSIIG+ G I+ + ET A IKIL+ + ER V I+A+E +
Sbjct: 249 EIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSDML 308
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA D ++RV+ RI + SSH P+ +LLVP+ G L+GK G + ++
Sbjct: 309 HSPAQDAVVRVYSRISEASIDRSSHTPA--------RLLVPSQHIGCLLGKGGSIISEMR 360
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + +R+ G E +P A ++D +V+V G + A+ I +R ++ + P
Sbjct: 361 KITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPK---PHPS 417
Query: 309 MHMQMPNPQMDHIPPPQSW--GPPQGLPPSGG-PGYGHNP-------------QYMPPPR 352
M P P + +IP QS PP L PSGG P Y +P + PPP
Sbjct: 418 GGMP-PYPPVGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPFRPDAPMGHFEMGDHRPPPV 476
Query: 353 QAESYYPPADL----------PPPMEKQPHQGIS-----AYGREAPVNVHGS-------- 389
+ Y + P P +QP E P N+ +
Sbjct: 477 HSMEYMGADRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRNMSDAVPATDFRK 536
Query: 390 -----SNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
N +TP+ T+V IP +Y V G G+ I I + SGA++T+ + +
Sbjct: 537 GPVAIENQVATPTGTTEVI----IPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKAGD 592
Query: 445 GEMTVEISGTASQVQTAQQLIQNFM 469
V I G + + AQ LI F+
Sbjct: 593 ANSKVVICGDPEETKKAQSLIHAFI 617
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 124/330 (37%), Gaps = 74/330 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L P+ +V ++ +R +D PP E ++IS + P +++
Sbjct: 36 LRLLCPSSRVATL--------------RPSRDLHVDHPPVGDEAVLVISGPDTPAAAV-- 79
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSG------TGGKVSTKLLVPASQAGSLIGKQGGTVK 245
R + +V G + A G G V ++L Q G ++GK G TV+
Sbjct: 80 ------RAWEHVV-GHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVE 132
Query: 246 SIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
+++ +RV E LP +A D ++ + G S V KA+ + + L+
Sbjct: 133 RMRQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQ--------- 183
Query: 305 PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
P P +IP G P GLP G G G P P SY PP +P
Sbjct: 184 -------DNPRPDTHNIP----IGRPFGLP---GSGTGCPPGM--DPHSQRSYLPP-HIP 226
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMIT--QVTQQMQIPLSYADAVIGTAGA 422
+ R P N P ++ +M I ++IG G+
Sbjct: 227 -----------DYHTRNYPSNA-----GPPGPRFFFEQEIVFRMIILNEMVGSIIGKGGS 270
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEIS 452
+I ++ +GA + I E E V I+
Sbjct: 271 TIRALQSETGACIKILEPVADSDERVVAIT 300
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 174/346 (50%), Gaps = 38/346 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR+L P KV +++ ++ + + +++ D G+ ER V+I+++E P+ L
Sbjct: 343 IFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHELF 402
Query: 191 PAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
PA + +L + IVD G D D+ ++T+LLVP+S+ G++G ++ IQ
Sbjct: 403 PAQEAVLHIQTHIVDLGPDKDNI---------ITTRLLVPSSEIACFDGREG-SLSDIQR 452
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
++ V++L EDLP+ AL+ D ++++VG+ S A+ + + LR FL
Sbjct: 453 QTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSFL----------- 501
Query: 310 HMQMPNP-QMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
+ +M P Q+ +I + P G P GGP G++ MP +Y+ + L
Sbjct: 502 YREMSGPIQVGNINVHGAISPVAGSP--GGPNLGND---MP----MSAYHQASQLATSWH 552
Query: 369 KQPHQGISAYGREAPVNV-----HGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGAS 423
+ G ++ + N+ G++ + P ++T+ T ++ IP S ++ AG+
Sbjct: 553 SKDSGGSASGSFDQGSNIIDEIRQGATKRFAVP-LVTRSTLEVVIPNSAVASLTMRAGSK 611
Query: 424 ISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
++ I SGATVT+ E R E V ISGT Q A+ L+Q F+
Sbjct: 612 LAQISEISGATVTLAEDRPDILEKVVRISGTPEQASKAENLLQGFI 657
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI----SAKEEPES 187
FR+L P K G F+ K+ +++ A + + PP + +I A+ E +
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDDSGALVTV--HPPFAGDYVRVIETVDGARREADG 145
Query: 188 SLP---PAMDGLLRVHKRIVD----GLDSDSSHAPSGTG----GKVSTKLLVPASQAGSL 236
P PA + LL VH+RI++ D D + P G GK +T+L+VP G L
Sbjct: 146 RPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPKMHVGCL 205
Query: 237 IGKQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+GK G ++ ++ + +R+L + P + VV+VVGD + V KA+ +I L+
Sbjct: 206 LGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLK 265
Query: 296 KFLVDRSIIPLFEMHMQMPNPQM 318
+ L R P F M P P++
Sbjct: 266 ESL-HRDRGP-FRGRMNSPEPRI 286
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 172/343 (50%), Gaps = 34/343 (9%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR+L P+ KV S++G + ++ + E+ I++ D G+ ER ++I+++E P+ L
Sbjct: 340 IFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELF 399
Query: 191 PAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
PA + LL + IVD G D D+ ++T+LLVP+S+ G+ G++ IQ
Sbjct: 400 PAQEALLHLQTHIVDLGPDKDNI---------ITTRLLVPSSEIACFEGRD-GSLSDIQR 449
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
++ V++L + LP AL+ D ++++VG+ A+ I + LR +
Sbjct: 450 QTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLRSYF----------- 498
Query: 310 HMQMPNP-QMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
+ ++P P Q+ +I S P +G P GP G + +P P SY +P +
Sbjct: 499 YREIPGPNQLGNITVHGSISPAKGSP--RGPYQGSD---IPMP----SYQQAQHVPASWK 549
Query: 369 KQPHQGISAYGREAPVN--VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
++ + + +N + S+ + ++T+ T ++ IP S ++ AG+ ++
Sbjct: 550 DSGGGANMSFEQGSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQ 609
Query: 427 IRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
I SGATVT+ + R E V ISGT Q AQ L+Q F+
Sbjct: 610 ISEMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLLQGFI 652
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPES-- 187
FR+L P KV G FI K+ ++T A + I PG R + S A+ E +
Sbjct: 87 FRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARREADGRP 143
Query: 188 -SLPPAMDGLLRVHKRIV----DGLDSDSSHAPSGTG----GKVSTKLLVPASQAGSLIG 238
S PA + LL VH+RI+ D D D + P GKV+T+L+VP G L+G
Sbjct: 144 PSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCLLG 203
Query: 239 KQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
K G ++ ++ + +R+L + P + VV+VVG+ + V KA+ +I L++
Sbjct: 204 KGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLKES 263
Query: 298 L 298
L
Sbjct: 264 L 264
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 172/343 (50%), Gaps = 34/343 (9%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR+L P+ KV S++G + ++ + E+ I++ D G+ ER ++I+++E P+ L
Sbjct: 340 IFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELF 399
Query: 191 PAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
PA + LL + IVD G D D+ ++T+LLVP+S+ G+ G++ IQ
Sbjct: 400 PAQEALLHLQTHIVDLGPDKDNI---------ITTRLLVPSSEIACFEGRD-GSLSDIQR 449
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
++ V++L + LP AL+ D ++++VG+ A+ I + LR +
Sbjct: 450 QTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLRSYF----------- 498
Query: 310 HMQMPNP-QMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
+ ++P P Q+ +I S P +G P GP G + +P P SY +P +
Sbjct: 499 YREIPGPNQLGNITVHGSISPAKGSP--RGPYQGSD---IPMP----SYQQAQHVPASWK 549
Query: 369 KQPHQGISAYGREAPVN--VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
++ + + +N + S+ + ++T+ T ++ IP S ++ AG+ ++
Sbjct: 550 DSGGGANMSFEQGSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQ 609
Query: 427 IRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
I SGATVT+ + R E V ISGT Q AQ L+Q F+
Sbjct: 610 ISEMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLLQGFI 652
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 111/241 (46%), Gaps = 31/241 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPES-- 187
FR+L P KV G FI K+ ++T A + I PG R + S A+ E +
Sbjct: 87 FRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARREADGRP 143
Query: 188 -SLPPAMDGLLRVHKRIV----DGLDSDSSHAPSGTG----GKVSTKLLVPASQAGSLIG 238
S PA + LL VH+RI+ D D D + P GKV+T+L+VP G L+G
Sbjct: 144 PSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCLLG 203
Query: 239 KQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
K G ++ ++ + +R+L + P + VV+VVG+ + V KA+ +I L++
Sbjct: 204 KGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLKES 263
Query: 298 LVDRSIIPLFEMHMQMPN---PQMDHIPPPQSWGPPQGLP----PSGGPGYGHNPQYMPP 350
L R P F M P PQ D + +G Q +P P G P N M P
Sbjct: 264 L-HRDRGP-FRGRMNSPEHRFPQED-----EYYGGAQQMPAYEEPYGRPDQIRNNTSMEP 316
Query: 351 P 351
P
Sbjct: 317 P 317
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 162/379 (42%), Gaps = 50/379 (13%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFRM+ + VGSIIG+ G I+ + ET A IKI++ + ER ++ISA E E
Sbjct: 25 EIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMM 84
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA D +LRVH RI + SS V+ +LLVP+ G L+GK G + ++
Sbjct: 85 HSPAQDAVLRVHSRISESSMDKSS--------AVTARLLVPSQHIGCLLGKGGSIIAEMR 136
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + +R+ G E +P A ++D +V+V G + A+ I +R ++ P
Sbjct: 137 KITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGG 196
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQ---GLPPSGGPGYG------------------HNPQY 347
M P P Q PP G+PP P + H+ ++
Sbjct: 197 MPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEH 256
Query: 348 MPPPRQAESY--------YPPADLPPPMEKQPHQGISAYGREAPVNV---------HGSS 390
M R SY P D P P P S R P V +
Sbjct: 257 MGADRMPYSYGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGT 316
Query: 391 NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVE 450
N +TPS T+V IP Y + G G+ ++ I++ SGAT+T+ + V
Sbjct: 317 NQVATPSNATEVI----IPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVI 372
Query: 451 ISGTASQVQTAQQLIQNFM 469
I G Q + AQ L+ F+
Sbjct: 373 ICGDPDQTKKAQSLLHAFI 391
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 162/379 (42%), Gaps = 50/379 (13%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFRM+ + VGSIIG+ G I+ + ET A IKI++ + ER ++ISA E E
Sbjct: 244 EIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMM 303
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA D +LRVH RI + SS V+ +LLVP+ G L+GK G + ++
Sbjct: 304 HSPAQDAVLRVHSRISESSMDKSS--------AVTARLLVPSQHIGCLLGKGGSIIAEMR 355
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + +R+ G E +P A ++D +V+V G + A+ I +R ++ P
Sbjct: 356 KITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGG 415
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQ---GLPPSGGPGYG------------------HNPQY 347
M P P Q PP G+PP P + H+ ++
Sbjct: 416 MPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEH 475
Query: 348 MPPPRQAESY--------YPPADLPPPMEKQPHQGISAYGREAPVNV---------HGSS 390
M R SY P D P P P S R P V +
Sbjct: 476 MGADRMPYSYGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGT 535
Query: 391 NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVE 450
N +TPS T+V IP Y + G G+ ++ I++ SGAT+T+ + V
Sbjct: 536 NQVATPSNATEVI----IPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVI 591
Query: 451 ISGTASQVQTAQQLIQNFM 469
I G Q + AQ L+ F+
Sbjct: 592 ICGDPDQTKKAQSLLHAFI 610
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSL 189
+ R+L P+ + ++ G +R +D PP E + IS + P ++
Sbjct: 36 TTLRILCPSSRASALRGA-------------SRDLHVDQPPVGDEAVLSISGPDAPAVAV 82
Query: 190 PPAMDGLLRVHKRIVD---GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
R +R+V G D + G V ++L + Q G ++GK G TV+
Sbjct: 83 --------RAWERVVGHRVGGDEAAGEEEREVPGVVGCRMLAASGQVGCVLGKGGKTVER 134
Query: 247 IQEASNCIVRVLGAED-LPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+++ S +RV D LP +A D ++ + G+ S V KA+ L+ + L
Sbjct: 135 MRQESGAQIRVFRNRDQLPPWAAPVDELIHISGNFSAVRKALLLVTTCL 183
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 162/379 (42%), Gaps = 50/379 (13%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFRM+ + VGSIIG+ G I+ + ET A IKI++ + ER ++ISA E E
Sbjct: 236 EIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMM 295
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA D +LRVH RI + SS V+ +LLVP+ G L+GK G + ++
Sbjct: 296 HSPAQDAVLRVHSRISESSMDKSS--------AVTARLLVPSQHIGCLLGKGGSIIAEMR 347
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + +R+ G E +P A ++D +V+V G + A+ I +R ++ P
Sbjct: 348 KITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGG 407
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQ---GLPPSGGPGYG------------------HNPQY 347
M P P Q PP G+PP P + H+ ++
Sbjct: 408 MPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEH 467
Query: 348 MPPPRQAESY--------YPPADLPPPMEKQPHQGISAYGREAPVNV---------HGSS 390
M R SY P D P P P S R P V +
Sbjct: 468 MGADRMPYSYGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGT 527
Query: 391 NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVE 450
N +TPS T+V IP Y + G G+ ++ I++ SGAT+T+ + V
Sbjct: 528 NQVATPSNATEVI----IPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVI 583
Query: 451 ISGTASQVQTAQQLIQNFM 469
I G Q + AQ L+ F+
Sbjct: 584 ICGDPDQTKKAQSLLHAFI 602
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 174/371 (46%), Gaps = 59/371 (15%)
Query: 117 GSTEKKWPGWP-GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTER 175
GS + P P E +FR+L P K S++G + I + E +++ D G+ ER
Sbjct: 349 GSKFNEHPEIPYDEIIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDER 408
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
++I+++E P+ L PA + LL + IVD G D D+ ++T+LLVP+S+
Sbjct: 409 TLIITSREGPDHELFPAQEALLHIQTFIVDLGPDKDNI---------ITTRLLVPSSEIA 459
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G+ G++ IQ ++ V++L E+LP AL+ D ++++VG+ A+ + + L
Sbjct: 460 CFEGRD-GSLSDIQRQTSANVQILPREELPSCALESDELIQIVGEIRAARNALMQVTTKL 518
Query: 295 RKFLVDRSIIPLFEMHMQMPNP-QMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQ 353
R ++ + +MP P Q+ I S P +G P
Sbjct: 519 RSYI-----------YREMPAPIQIGGINVHGSISPAKGSP------------------- 548
Query: 354 AESYYPPADLPPPMEKQ-PHQGISAYGREAPVNVHGSSNAQSTPS--------------M 398
Y DLP P+ +Q P S + +++ ++ GS S+ + +
Sbjct: 549 -RGLYAGNDLPMPIYQQAPQMATSWHSKDSGLSASGSFEQGSSINDDMRQSNTKRYAVPL 607
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
+T+ T ++ IP S ++ AG+ ++ I SGA+VT+ E R E V ISGT Q
Sbjct: 608 VTRSTLEVVIPQSAVASLSMRAGSKLAQISEMSGASVTLAEERPGVTEKVVRISGTPEQA 667
Query: 459 QTAQQLIQNFM 469
AQ L+Q F+
Sbjct: 668 DKAQSLLQGFI 678
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 17/181 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS--- 188
FR+L P K G FI +++ A I I PG R + + E+
Sbjct: 111 FRILCPESKA---YGFPASFINNAQDDSGAIITIHPPFPGDPVRVIETADGTLREADGRP 167
Query: 189 --LPPAMDGLLRVHKRIV----DGLDSDSSHAPSGTG----GKVSTKLLVPASQAGSLIG 238
PA + LL VH+RI+ D D D + P G GKV+T+L+VP G L+G
Sbjct: 168 PMFSPAQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRGKVTTRLIVPRQHVGCLLG 227
Query: 239 KQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
K G ++ ++ + +R+L E ++P ++VV+VVG+ + V KA+ +I L++
Sbjct: 228 KGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKAVAIISDRLKES 287
Query: 298 L 298
L
Sbjct: 288 L 288
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 172/357 (48%), Gaps = 31/357 (8%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
FR+L PA++VG+IIG+ G IK + +ET + IK+L+ PP + + ++IS PE +
Sbjct: 326 TFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPEDRIS 385
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
P + + RV RI + H + + LV ++Q G L+GK G + +++
Sbjct: 386 PVQEAVFRVQTRIAKPIPDAKDHI-------MLARFLVSSTQIGCLLGKGGSIITEMRKK 438
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S +R+LG + +P A +D+ V++V G+ VH A+ I + L+ R P ++
Sbjct: 439 SGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKHHCF-RDSYP--SVN 495
Query: 311 MQMPNPQMDHIPPPQSWGPPQGL-PPSGGPGYGH-NPQYMPP----PRQAESYYPPADLP 364
+P +D +PP + +GL PP GH +P P P S + P LP
Sbjct: 496 YPSNSPFLDQLPPFPPYLGRRGLSPPRMYSDLGHPHPHAGFPLDDRPPFLNSIHRPG-LP 554
Query: 365 PPM-EKQPH--QGISAYGREAPVNV---------HGSSNAQSTPSMITQVTQQMQIPLSY 412
P + E++P QGI G P+ + S A + +IT T ++ +P +
Sbjct: 555 PHISERKPWGPQGILEGG--IPIGLPDFPGGPPRRISGFAGGSQPIITSTTVEVVVPRAV 612
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ G G + I + S A +TI + + E + ISGT Q AQ LIQ F+
Sbjct: 613 VPVIYGEDGECLKQILQISDANITITDPKPGTVETKIIISGTPEQTHAAQSLIQAFV 669
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 150/409 (36%), Gaps = 103/409 (25%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKI---------VEE----TRARIKILDGPPGTT 173
PG VFR+L A ++G +IG+ G I +I +EE R+ + G T
Sbjct: 31 PGSVVFRLLCHASRIGGVIGKGGSIISQIRQETGVKLRIEEAVPGCDERVITISGSEKET 90
Query: 174 ERAVMISAKE-------------------------EPESSLPPAMD------------GL 196
E KE + E P D +
Sbjct: 91 EEDNTEQGKEVNDNDDGGSEGKDREEKDDGDGNEDKREKDAVPVEDSKSEKGNSAIWKAI 150
Query: 197 LRVHKRIVDGLD-----SDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
V +R+V+G++ + S+ PS +LL+ +Q G ++GK G +K + S
Sbjct: 151 SLVFERMVEGVEETTEGDEESNKPS----SFFLRLLILTAQVGCVLGKGGSVIKRMAAES 206
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
+R+L + LP A D +V++ G V KA++ + L
Sbjct: 207 GAQIRILPKDKLPACASASDEIVQISGSVEVVRKALQSVSQQL----------------- 249
Query: 312 QMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
+ NP DH +S GP H+ PP S+ + P
Sbjct: 250 -LENPPRDHDSLSAKSTGPSS-----------HSFGQFPP--HNRSFSAQGE---PFASG 292
Query: 371 PHQGISAYGREAPV--NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
PH ISA+ AP+ H ++ + +T ++ P +IG GA I ++
Sbjct: 293 PHD-ISAFHSAAPLIPKFHEAAIHGRMRPLQEMLTFRLLCPAERVGNIIGKGGAIIKTVQ 351
Query: 429 RSSGATVTIQETRGVPGEMTVEISGTA------SQVQTAQQLIQNFMAE 471
+ + + + + E + + ISG A S VQ A +Q +A+
Sbjct: 352 QETASEIKVLEAPPDSEDCVIVISGPAHPEDRISPVQEAVFRVQTRIAK 400
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 179/442 (40%), Gaps = 112/442 (25%)
Query: 74 PEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFR 133
PE H E DH P + +PED+ P + + E+ E FR
Sbjct: 241 PEYHSMEYHPQWDHPPPNPMPEDVGPFNRPVVEE---------------------EVAFR 279
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAM 193
+L PA KVGS+IG+ G ++ + E+ A IK+ D + ER ++ISA+E E A
Sbjct: 280 LLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQ 339
Query: 194 DGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASN 252
DG++RVH RIV+ G + ++ V +LLV + G L+GK G + ++ A+
Sbjct: 340 DGVMRVHNRIVEIGFEPSAA---------VVARLLVHSPYIGRLLGKGGHLISEMRRATG 390
Query: 253 CIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV------------- 299
+RV + + Q D +V+V+G+ V A+ I LR+ +
Sbjct: 391 ASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPP 450
Query: 300 -----------------------DRS---IIPLFEMHM------QMPNPQMDHIPPPQSW 327
DR + P E H + P P D P P SW
Sbjct: 451 PPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSW 510
Query: 328 GPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVH 387
P PG +P M PP + + +P G E PV
Sbjct: 511 TPQ--------PGIDGHPGGMVPPDVNHGF--------ALRNEP------IGSENPV--- 545
Query: 388 GSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEM 447
+T ++ IP +Y V G ++++YI++ SGA V + + + E
Sbjct: 546 -----------MTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEG 594
Query: 448 TVEISGTASQVQTAQQLIQNFM 469
V +SGT+ Q AQ L+ F+
Sbjct: 595 LVVVSGTSDQAHFAQSLLHAFI 616
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 145/349 (41%), Gaps = 90/349 (25%)
Query: 129 ESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG-TTERAVMI---SAKE 183
ESV FR+L PA + G+IIG+ G I+ + T ++I+++D P + ER V+I S K+
Sbjct: 17 ESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 184 EPESSL-------------------------------PPAMDGLLRVHKRIVDGLDSDSS 212
+ ES++ A LLRV +RIV G D+ +
Sbjct: 77 KDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATV 136
Query: 213 HAPSGTGGKVS--TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQD 270
G+ +++V +Q L+ K G ++ I+E S IVR+ + +P A
Sbjct: 137 DGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAFPG 196
Query: 271 DRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPP 330
D V+++ G S V KA+ L+ + L++ S P P D P PQ
Sbjct: 197 DVVIQMNGKFSSVKKALLLVTNCLQE-----SGAP----------PTWDECPFPQ----- 236
Query: 331 QGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSS 390
PGY PP + Y+P D PPP G P N
Sbjct: 237 --------PGY-------PPEYHSMEYHPQWDHPPPNPMPEDVG--------PFN----- 268
Query: 391 NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE 439
P + +V ++ P ++IG GA + ++ SGA++ + +
Sbjct: 269 ----RPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSD 313
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP-----GEMTVEISGTASQVQ 459
+M + + D ++ G I IR SGA V I T +P G++ ++++G S V+
Sbjct: 151 RMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAFPGDVVIQMNGKFSSVK 210
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYNP-YASM-----YGSPPSNP 502
A L+ N + E+ AP GY P Y SM + PP NP
Sbjct: 211 KALLLVTNCLQESGAPPTWDECPFPQPGYPPEYHSMEYHPQWDHPPPNP 259
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 167/359 (46%), Gaps = 35/359 (9%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
FR+L P ++VG+IIG+ G IK + +ET + IK+L+ PP + + ++IS PE +
Sbjct: 328 TFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDSEDCVIVISGPAHPEDRVS 387
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
P + + RV RI + + H + + LV ++Q G L+GK G + +++
Sbjct: 388 PVQEAVFRVQTRIAKPIPDANDHT-------MLARFLVSSNQIGCLLGKGGSIITEMRKK 440
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S +R+LG + +P A +D+ V++V G+ VH+A+ I + L+ R P ++
Sbjct: 441 SGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHEALLQITTRLKHHFF-RDSYP--SVN 497
Query: 311 MQMPNPQMDHIPPP---------------QSWGPP---QGLPPSGGPGYGHNPQY--MPP 350
+P +D +PP GPP G P P + +N +PP
Sbjct: 498 YPSNSPFLDQLPPFPPYLGRRGLSPPGMYSDLGPPPSHAGFPLDDRPAFLNNIHRPGLPP 557
Query: 351 PRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
+ P + +E G+ + R P + G + S P +IT T ++ +P
Sbjct: 558 HISQRKPWGPLGV---LEGGTPIGLPDFPRGPPRRISGFAGG-SQP-IITSTTVEVVVPR 612
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ + G G + I + S A +TI + + E + ISGT Q AQ LIQ F+
Sbjct: 613 AVVPVIYGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFV 671
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
PG VFR+L A ++GS+IG+ G I +I ET ++KI + PG ER + IS ++
Sbjct: 31 PGSVVFRLLCHASRIGSVIGKGGSIISQIRLETGVKVKIEEAVPGCDERVITISGSDK 88
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 43/282 (15%)
Query: 199 VHKRIVDGLDSDS-SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRV 257
V +R+V+G++ + S +LL+ +Q G ++GK G +K + S +R+
Sbjct: 155 VFERMVEGVEETTEGDEESNKSSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIRI 214
Query: 258 LGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQ 317
L + +PV A D +V++ G V KA++ + L + NP
Sbjct: 215 LPKDKVPVCASAFDEIVQISGSVEVVRKALQSVSQQL------------------LENPP 256
Query: 318 MDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISA 377
DH +S P S H+ PP S+ + P PH ISA
Sbjct: 257 RDH----ESLSAKSTGPSS------HSFGQFPP--HNHSFAAQGE---PFATGPHD-ISA 300
Query: 378 YGREAPV--NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATV 435
+ P+ H ++ T + +T ++ P+ +IG GA I +++ + + +
Sbjct: 301 FHSAPPLIPKFHEAAIHGRTRPLQEMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEI 360
Query: 436 TIQETRGVPGEMTVEISGTA------SQVQTAQQLIQNFMAE 471
+ E + + ISG A S VQ A +Q +A+
Sbjct: 361 KVLEAPPDSEDCVIVISGPAHPEDRVSPVQEAVFRVQTRIAK 402
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 156/328 (47%), Gaps = 33/328 (10%)
Query: 140 KVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV 199
K+G +IG+KG IKK+ +ET A IKI D T +RAV+IS+K E S A LL V
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALLEV 571
Query: 200 HKRIV---DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVR 256
++ DG ++ P G T+LL+ SQAGSLIGK G +K+I+ +S+ VR
Sbjct: 572 VTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVR 631
Query: 257 VLGAEDLPVF--ALQDDRVVEVVGDASGVHKAMELIGSHLR----KFLVDRSIIPLFEMH 310
VL ++ LP+ A + DR+V++ G+ + V A+EL+ ++LR K V +
Sbjct: 632 VLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPKETVPTNPEAKTAYF 691
Query: 311 MQMP-NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEK 369
+ + N + P S G PS YG P + P A A PP+
Sbjct: 692 LGIDGNTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPLAGPAYAGGVLAQA---PPLYA 748
Query: 370 QPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRR 429
P A P M+ +V+ +M +P S +IG G IS++R
Sbjct: 749 NP--------------------AARLPPMLPKVSAEMSVPSSVMGGLIGKGGFHISHMRS 788
Query: 430 SSGATVTIQETRGVPGEMTVEISGTASQ 457
SGAT+ + ++ E T+ GT Q
Sbjct: 789 VSGATIKVNGSKESSVERTILFEGTQEQ 816
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 168/357 (47%), Gaps = 32/357 (8%)
Query: 127 PGESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEP 185
P ES+ FRML P KVGSIIG+ G +K I ++T IK+LD P + +R + IS P
Sbjct: 384 PIESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHP 443
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
+ PA + +L V ++I+ SD P+ +L+V A+Q G ++GK G +
Sbjct: 444 SDGISPAQNAILHVQRKIMLPT-SDKKEGPA------ICRLIVSANQVGCVLGKGGSIIA 496
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK--FLVDRSI 303
+++ S + VL + +P + D VV++ G + +A+ I + LR F VDR
Sbjct: 497 EMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQITARLRNHLFRVDR-- 554
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES----YYP 359
+P +M+ P +D +GP G S P H +M P S
Sbjct: 555 MPAMGPNMRPPFGLLD-----SQFGPFAGNHES--PSLFHK-DFMGRPLDGISAPWTVKG 606
Query: 360 PADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGT 419
DL P+ G A REA G + PSM+ +T ++ +P A+
Sbjct: 607 MRDLSDPLSISDIPG--AGHREA-----GGFSGPGQPSMMPNLTAEVLVPRLIIPALCSE 659
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF-MAEAAAP 475
G + IR S A +T+ E ++ V ISGT Q+ A+ L+Q F M+E+ AP
Sbjct: 660 DGGCLDRIREFSEAKITVAEPIADAMDIPVLISGTPDQMHAARSLVQAFVMSESFAP 716
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 52/283 (18%)
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQ 240
A+ EPE +P A+ + V RI D++ + S VS +LLV SQAG L+GK
Sbjct: 203 AESEPERVIPSALKAISLVFDRIFAAGDNNETGNASAASTPVSLRLLVLYSQAGWLLGKG 262
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
G +K + + C +RVL ++LP AL +D++ ++ G+ V K + +
Sbjct: 263 GSVIKQMSADNGCEIRVL-RDNLPSCALLNDKLCQITGEIDSVRKGLNAVS--------- 312
Query: 301 RSIIPLFEMHMQMPNPQMDHIPPPQS--------WGPPQGLPPSGGPGYGHNPQYMPPPR 352
E+ + P + D + S + GL PSG H P + P
Sbjct: 313 -------ELLLAHPPKETDAVSGVHSSGSSSRSLFNQSDGL-PSGMQSNFHIP--LQGPS 362
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
QA + DL PP +HG + S P I ++ +M P
Sbjct: 363 QANGPFDIIDLQPP-------------------IHGHA---SVP--IESLSFRMLCPQDK 398
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA 455
++IG G + I++ +G + + +T + + ISG A
Sbjct: 399 VGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPA 441
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
PG FR+L PA K G++IG+ G I KI EETR RI++ PG ER + I+A ++ E
Sbjct: 42 PGVPFFRILCPASKSGNVIGKGGAIIAKIREETRMRIRVDRAAPGCDERVIFITAVDKDE 101
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 155/336 (46%), Gaps = 47/336 (13%)
Query: 140 KVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV 199
K+G +IG+KG IKK+ +ET A IKI D T +RAV+IS+K E S A LL V
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELALLEV 572
Query: 200 HKRIV---DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVR 256
++ DG ++ P G T+LL+ SQAGSLIGK G +K+I+ +S+ VR
Sbjct: 573 VTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVR 632
Query: 257 VLGAEDLPVF--ALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMP 314
VL ++ LP+ A + DR+V++ G+ + V A+EL+ ++LR P E P
Sbjct: 633 VLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDN-------PPKETVPTTP 685
Query: 315 NPQMDH------------IPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
+ + + P S G PS YG P + P A A
Sbjct: 686 EAKTAYFLGIDGKTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPLAGPAYAGGVLAQA- 744
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
PP+ P A P M+ +V+ +M +P S +IG G
Sbjct: 745 --PPLYANP--------------------AARLPPMLPKVSAEMSVPSSVMGGLIGKGGF 782
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
IS++R SGAT+ + ++ E T+ GT Q
Sbjct: 783 HISHMRSVSGATIKVNGSKESSVERTILFEGTQEQC 818
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 159/366 (43%), Gaps = 53/366 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
FR+L + KVGSIIG+ G IK I ++T IKIL+ P + +R ++IS P +
Sbjct: 396 TFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPAHPGDGIS 455
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA + +L V +RI ++ G ++L+V +Q G L+GK G + +++
Sbjct: 456 PAQNAILHVQRRITPPTANNKE-------GAAISRLIVSPNQVGCLLGKGGSIIAEMRKL 508
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S + VL + +P + D VV++ GD+ + +A+ I + LR LF
Sbjct: 509 SKAHIVVLSKDKIPKGVQESDEVVQITGDSEAIQEALMQITARLRNH--------LFRDR 560
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY---PPADLPPP- 366
M P M PP S P G G +P+ P Q + P ++P P
Sbjct: 561 MAAMGPNMQ--PPFGSLDPQFGA--FAGSHESTSPRIYPNASQFHKDFMGRPLDEMPAPW 616
Query: 367 ----------------MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
M PH+GI + + + S + +T+ + +P
Sbjct: 617 NAKGMRDVGDPMSISGMPGMPHRGIGGF-------------SGAGHSSMPNITRDIMVPR 663
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF-M 469
A+ G G ++ IR SGA +T E + ISGT Q+ A+ LIQ F +
Sbjct: 664 FVIPALCGHDGGCLNMIREFSGAMITFTEPIADAADTPFMISGTLDQMHAARSLIQAFVL 723
Query: 470 AEAAAP 475
+E AP
Sbjct: 724 SEPPAP 729
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 115/287 (40%), Gaps = 31/287 (10%)
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
+V K EPE L M+ +L V RI + S PSG VS +LLV SQ G
Sbjct: 186 SVAKDTKAEPERVLLSPMNAILHVFDRIFITEIGNESGDPSGERTPVSFRLLVLDSQVGW 245
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
L+G +G +K + S C +RV E LP+ AL D + ++ G+ V K + + L
Sbjct: 246 LLGNRGSVIKQMSADSGCEIRV-SKEKLPLCALLKDELCQITGELDSVRKGLNAVAQVL- 303
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIP---PPQSWGPPQGLPPSGGPGYG---HNPQYMP 349
+ P + D +P ++ LPP P + P +
Sbjct: 304 ---------------LTHPPRESDVLPSGLSSHAFNRSDALPPGMQPNFSLPFQGPSHAR 348
Query: 350 PPRQAESYYPPADLPP-PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQI 408
P +S P ++PP P I + +H ++ P +T ++
Sbjct: 349 GP--FDSIDPRPNIPPFPTFPDQRSNIPPFPAFPDALMHSHASVPPEP-----LTFRLLC 401
Query: 409 PLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA 455
++IG G +I I++ +G + I ET + + ISG A
Sbjct: 402 SSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPA 448
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
PG + R+L P +K G++IG+ G I KI +E +I++ + PG ER ++I+ E+
Sbjct: 42 PGVPLIRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITEK 99
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 171/357 (47%), Gaps = 34/357 (9%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E +F++L +VG +IG+ G +K + E A I + ER + I+A E PES
Sbjct: 298 EVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESR 357
Query: 189 LPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PA +G++ V R ++ GLDS S +P VS +L+VP++Q G L+GK G
Sbjct: 358 YSPAQNGVILVFNRSIEAGIEKGLDSGSKGSP------VSARLVVPSNQVGCLMGKGGTI 411
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ +++AS +R++G++ +P A ++D+VV++ G+ V + I LR L
Sbjct: 412 ISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKT 471
Query: 304 IPLFEMHMQMPNPQMDHIPP------PQSWGPPQGLPPSGGPGYGHN---PQYMPPPRQA 354
+ + + M+ I P P S+G + S P + + Q M +
Sbjct: 472 LNGAGIR---SSSAMNEISPYGRVRDPASFGLHSSVGVS--PSFSRHTTLTQSMDHLGLS 526
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGS--SNAQSTPSMITQVTQQMQIPLSY 412
S D P P Q ++ P N+ G + S ++IT T ++ IP +
Sbjct: 527 HSL----DHPTSPRLWPSQTVTGVN---PRNIKGGIELGSGSKSAIITNTTVEIVIPENV 579
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+V G G +++ +R+ SGA VT+ E R + V ISGT + Q AQ L+Q F+
Sbjct: 580 IGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 636
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA------ 181
G FR+L A ++G +IG+ G +K++ +T ARI++ D P + R +++ A
Sbjct: 49 GHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNR 108
Query: 182 -------KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
EE E+S A + +LRV +RI++ P GG VS +LL SQ G
Sbjct: 109 RIALQGSSEEVEAS--AAQEAVLRVFERILEVAAVVDGVPP---GGVVSCRLLAETSQVG 163
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S+IGK G V+ I+ S ++VL AE LP A D +VE+ GD V KA+ + L
Sbjct: 164 SVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRL 223
Query: 295 RKF-LVDRSII----PLFEMHMQ-MPNPQMDHIPPPQSWGPP 330
+ VD++ + PL + Q +P+P++D S PP
Sbjct: 224 QDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLPP 265
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 171/357 (47%), Gaps = 34/357 (9%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E +F++L +VG +IG+ G +K + E A I + ER + I+A E PES
Sbjct: 219 EVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESR 278
Query: 189 LPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PA +G++ V R ++ GLDS S +P VS +L+VP++Q G L+GK G
Sbjct: 279 YSPAQNGVILVFNRSIEAGIEKGLDSGSKGSP------VSARLVVPSNQVGCLMGKGGTI 332
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ +++AS +R++G++ +P A ++D+VV++ G+ V + I LR L
Sbjct: 333 ISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKT 392
Query: 304 IPLFEMHMQMPNPQMDHIPP------PQSWGPPQGLPPSGGPGYGHN---PQYMPPPRQA 354
+ + + M+ I P P S+G + S P + + Q M +
Sbjct: 393 LNGAGIR---SSSAMNEISPYGRVRDPASFGLHSSVGVS--PSFSRHTTLTQSMDHLGLS 447
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGS--SNAQSTPSMITQVTQQMQIPLSY 412
S D P P Q ++ P N+ G + S ++IT T ++ IP +
Sbjct: 448 HSL----DHPTSPRLWPSQTVTGVN---PRNIKGGIELGSGSKSAIITNTTVEIVIPENV 500
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+V G G +++ +R+ SGA VT+ E R + V ISGT + Q AQ L+Q F+
Sbjct: 501 IGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 557
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 165/369 (44%), Gaps = 52/369 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
FR+L ++VG +IG+ G IK + +ET IK+++G + +R ++IS P+ +
Sbjct: 326 FRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEGVSDSEDRVIVISGLAHPDDRISA 385
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
D ++RV RI + A S + +LLV ++Q G L+GK G + ++++S
Sbjct: 386 PQDAVIRVQTRI--------AMAISNKEKAIIARLLVSSNQIGCLLGKGGAIMSEMRKSS 437
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
+R+LG + +P A + + VV++ G+ V +A+ I + LR LF
Sbjct: 438 GAYIRILGKDQIPNCASESEGVVQINGEFEVVKEALLQITTRLRHHFFQN----LFPSMD 493
Query: 312 QMPNPQ-MDHIPP-PQSWGPPQGLPPSGGPGYGHNPQY----MPPPRQAESYYPPADLPP 365
+ NP +D +PP P G + PP + P + PP + +PP D P
Sbjct: 494 HLSNPAFLDQVPPFPPYMGRKELSPP-----FHSFPNFDGMVGAPPHVS---FPPHDDHP 545
Query: 366 PMEKQPHQ-------------------------GISAYGREAPVNVHGSSNAQSTPSMIT 400
P H+ G+ + + G S P++IT
Sbjct: 546 PFMHNIHRPGMPPHIAERKPWGPQGFVEGGGPMGLPDFAGPPQRRISGFGGV-SHPAIIT 604
Query: 401 QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQT 460
T ++ +P + + G GA + IR+ S A +TI E + E + ISGT Q
Sbjct: 605 STTIEVIVPRTIVPVIYGEDGACLKQIRQISDAKITINEPKPGASETVIIISGTPEQTHA 664
Query: 461 AQQLIQNFM 469
AQ LIQ F+
Sbjct: 665 AQSLIQAFV 673
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 56/219 (25%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-------------IKILDGPPGTT 173
P VFR+L PA K+G++ G G I +I +ET A+ I ++ G T
Sbjct: 42 PAAVVFRILCPAPKIGTVTGEGGAVISQIRQETGAKVIVEENIPGCDEQIIVITGSDEKT 101
Query: 174 ERAVMISAKE-EPESSLPPAMD-------------------------------GLLRVHK 201
E ++ S K+ + E+++ D LL V
Sbjct: 102 EVSIEQSKKDGDEEANVAEESDNKNDGNEKEEEKEGVPVEDSGTVKETSSMQKALLLVSG 161
Query: 202 R------IVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
+ + DG D ++ + PS +LLV +SQ G L+GK G +K + S +
Sbjct: 162 KMFEADPVTDGGDEEN-NKPS----TFILRLLVLSSQVGCLLGKGGSVIKQMSAESGAQI 216
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
R+ + LP+ + D +VE+ G+ V KA++ + L
Sbjct: 217 RISPRDRLPICSSVSDELVEITGEIDAVRKALQSVSKQL 255
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 171/357 (47%), Gaps = 34/357 (9%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E +F++L +VG +IG+ G +K + E A I + ER + I+A E PES
Sbjct: 235 EVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESR 294
Query: 189 LPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PA +G++ V R ++ GLDS S +P VS +L+VP++Q G L+GK G
Sbjct: 295 YSPAQNGVILVFNRSIEAGIEKGLDSGSKGSP------VSARLVVPSNQVGCLMGKGGTI 348
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ +++AS +R++G++ +P A ++D+VV++ G+ V + I LR L
Sbjct: 349 ISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKT 408
Query: 304 IPLFEMHMQMPNPQMDHIPP------PQSWGPPQGLPPSGGPGYGHN---PQYMPPPRQA 354
+ + + M+ I P P S+G + S P + + Q M +
Sbjct: 409 LNGAGIR---SSSAMNEISPYGRVRDPASFGLHSSVGVS--PSFSRHTTLTQSMDHLGLS 463
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGS--SNAQSTPSMITQVTQQMQIPLSY 412
S D P P Q ++ P N+ G + S ++IT T ++ IP +
Sbjct: 464 HSL----DHPTSPRLWPSQTVTGVN---PRNIKGGIELGSGSKSAIITNTTVEIVIPENV 516
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+V G G +++ +R+ SGA VT+ E R + V ISGT + Q AQ L+Q F+
Sbjct: 517 IGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 573
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 101/167 (60%), Gaps = 7/167 (4%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFR+L P+ K+GS+IG+ G I + ++T ARIKI + PG+ ER +++SA E P S
Sbjct: 259 ELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANAVPGSDERVIIVSALELPGDS 318
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA++ +++V RI + D G ++T+LLVP +Q G L+GK G ++ ++
Sbjct: 319 FSPALEAMIQVQSRITAEMGGDKD-------GIITTRLLVPTNQIGCLLGKGGSIIEDMR 371
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
A+ +RVL + LP AL D +V++VGD + +A+ + S LR
Sbjct: 372 RATRANIRVLPKDTLPRCALDTDELVQIVGDTTVAREALFQVISRLR 418
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 160/344 (46%), Gaps = 75/344 (21%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA--------- 181
VFR+L PA K+GS+IG+ G IK + +E+ A+IKI D PG ER ++IS+
Sbjct: 4 VFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGNDRGR 63
Query: 182 -KEEPESSLPPAMDGLLRVHKRIV-----DGLD-SDSSHAPSGTGGKVSTKLLVPASQAG 234
K+ L PA + L +VH RI+ G+D SD PS +V T+LLVP +Q G
Sbjct: 64 GKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQ---QVVTRLLVPNNQIG 120
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
L+GK G ++ +++ + +RVL + LP AL D +V+V GD S + KA+ I + L
Sbjct: 121 CLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARL 180
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGP-------------GY 341
++ NP D PQS+ P P+ P G
Sbjct: 181 QE------------------NPPRDR---PQSYAAP---APAFVPVTDYLAKDSYRSKGT 216
Query: 342 GHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ 401
GH P P + S+ + +++Q ++ S GR++ N +
Sbjct: 217 GHVFGLGPEPLEGRSWTISSG-NLSLDRQDNRR-SKEGRDSGEN---------------E 259
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG 445
+ ++ P +VIG G+ I +R+ +GA + I VPG
Sbjct: 260 LVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANA--VPG 301
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 165/397 (41%), Gaps = 83/397 (20%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFRM+ VG +IG+ G I+ + ET A +K++D + ER ++ISA+E E
Sbjct: 251 EIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMM 310
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P+ D LLRV+ +I + SS P+ +LLVPA G L+GK G + ++
Sbjct: 311 RSPSQDALLRVYSKISEASMDKSSSVPA--------RLLVPAQHIGCLLGKGGSIIAEMR 362
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV--------- 299
+ + +R+ G E +P A ++D +V+V G + A+ I +R ++
Sbjct: 363 KLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLIIPPKPHPSGG 422
Query: 300 ----------------------DRSIIPLFEMHMQMPNPQM------------------- 318
+P + MH PNP M
Sbjct: 423 MPPYPPVGNPSHHQSRQEAPSHHSGGMPPYPMHPFRPNPPMGPFDVADPRPPGPPPSHPM 482
Query: 319 -----DHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPADLPPPMEKQPH 372
D +P P +G QG G P P PR P D P M P
Sbjct: 483 EHMGADRMPYP--YGCEQG---------GPRPFVEQPSPRTWAPEAPATDAPRSM---PD 528
Query: 373 QGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSG 432
+ R+ PV+ S N +TP+ T ++ IP Y V GT G+ + I++ SG
Sbjct: 529 TVPAVDFRKGPVS--SSENQVATPA---TTTTEVVIPCKYIGFVCGTNGSDLDEIKKISG 583
Query: 433 ATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
A +T+ + + TV I G Q + AQ LI F+
Sbjct: 584 AAITVHDPKPGDTNSTVIICGDPEQTKKAQSLIHAFI 620
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 44/234 (18%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDA 280
V ++L Q G ++GK G TV+ +++ S +RV E +P ALQ D ++ + G
Sbjct: 110 VGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGSF 169
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
S KA+ L+ + L+ P P + P + +GPP G G
Sbjct: 170 SAARKALLLVSTCLQ----------------DNPRPDTSNFPSGRPFGPP-------GSG 206
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMIT 400
G P P SY PP +P + R S+ A P
Sbjct: 207 VGCPPGV--DPHSQRSYLPPPHVP-----------DYHARN-----FSSNGAAPGPRFFV 248
Query: 401 --QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
++ +M VIG G++I ++ +GA+V + + E + IS
Sbjct: 249 EQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVIS 302
>gi|147866135|emb|CAN79839.1| hypothetical protein VITISV_014516 [Vitis vinifera]
Length = 340
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 193 MDGLLRVHKRIVDGL---DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
M+ ++ V KR V GL D + + + S LV SQA S+IGK+G V++I+E
Sbjct: 1 MEAVIEVFKR-VTGLYPIDGNGXCSKASEVKLSSVTFLVGYSQALSIIGKEGSRVRAIEE 59
Query: 250 ASNCIVRVL--GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+S V +L G +P + D+R++++ G V AME + HLR +LVD S+IP F
Sbjct: 60 SSGTTVGILSRGCAGVPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLRLYLVDSSVIPAF 119
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY--PPADLPP 365
M + QS P H P A+S Y P
Sbjct: 120 SEKMVXYQXKTGISQADQSLSLHHSTP-------AHQPG-------ADSMYSLPLLGHEA 165
Query: 366 PME-KQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
+E K P S Y +E PV + T++++IP S A +IG AG +I
Sbjct: 166 KVEAKIPSSXSSLYAQE-PVLGGLPLRRSXRAAAPAXRTERIKIPFSAAKDIIGIAGETI 224
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+IRR+SG+ +TI+E R +P E +E+ GT SQ+QTAQQLI+ +
Sbjct: 225 DHIRRTSGSIITIEEDRSLPDEYILEVRGTTSQLQTAQQLIEELL 269
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 168/379 (44%), Gaps = 57/379 (15%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAM 193
M++ + VGSIIG+ G I+ + ET A IKIL+ + ER V ISA+E + PA
Sbjct: 1 MIILNEMVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQ 60
Query: 194 DGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNC 253
D ++RV+ RI + SS P+ +LLVP+ G L+GK G + +++ +
Sbjct: 61 DAVVRVYSRISEASMDRSSPTPA--------RLLVPSQHIGCLLGKGGSIITEMRKITGA 112
Query: 254 IVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR----SIIPLFEM 309
+R+ G E +P A ++D +V+V G + A+ I +R ++ + +P +
Sbjct: 113 SIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPP 172
Query: 310 HMQMPNPQMDHIPPPQSWGPPQGLPP----SGGP----GYGHNPQYMPPPRQAESYYPPA 361
+P Q PPP P G+PP S P G+ + PPP + Y
Sbjct: 173 VGNIPVHQSRQEPPPPHLHPSGGMPPYPMHSFRPDAPMGHFETGDHRPPPVHSMEYMGAD 232
Query: 362 DLP-----------PPMEK--------------------QPHQGISAYGREAPVNVHGSS 390
+P P +E+ P ++ R+ PV S
Sbjct: 233 RMPYSYGGEQGGPRPFLEQPSPRTWPPEAPRTNSEAPRNMPDAVLATDLRKGPV---ASE 289
Query: 391 NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVE 450
N +TP T T ++ IP Y V G +G+ I IR+ SGA++T+ + + V
Sbjct: 290 NQVATP---TSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGDTNSIVV 346
Query: 451 ISGTASQVQTAQQLIQNFM 469
I G Q + AQ LI F+
Sbjct: 347 ICGDPEQTKKAQSLIHAFI 365
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 182/415 (43%), Gaps = 59/415 (14%)
Query: 74 PEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFR 133
P+ H E DH P + +PED+VP + + E+ E FR
Sbjct: 243 PDYHSMEYHPQWDH-PPNPMPEDVVPFNRPVVEE---------------------EVSFR 280
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAM 193
+L PA KVGS+IG+ G ++ + E+ A IK+ D + ER ++ISA+E E A
Sbjct: 281 LLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQ 340
Query: 194 DGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASN 252
DG++RVH RIV+ G + ++ V +LLV + G L+GK G + ++ A+
Sbjct: 341 DGVMRVHNRIVEIGFEPSAA---------VVARLLVHSPYIGRLLGKGGHLISEMRRATG 391
Query: 253 CIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQ 312
+RV + + Q D +V+V+G+ V A+ I LR+ + +
Sbjct: 392 ASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGLGGPP 451
Query: 313 MPNPQM-----------DHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPA 361
P + P + P G S + H P + PP P
Sbjct: 452 PPFMGPYPEPPPPFGPRQYPASPDRYHSPVG---SFHERHCHGPGFDRPPG------PGF 502
Query: 362 DLPP-PMEKQPHQGISAY-GREAPVNVHGSSNAQSTPS-----MITQVTQQMQIPLSYAD 414
D PP PM P GI + G P +V+ ++ P +T ++ IP +Y
Sbjct: 503 DRPPSPMSWTPQPGIDGHPGGMVPPDVNHGFALRNEPIGSENPAMTSANVEIVIPQAYLG 562
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
V G ++++YI++ SGA V + + + E V +SGT+ Q AQ L+ F+
Sbjct: 563 HVYGENCSNLNYIKQVSGANVVVHDPKAGATEGLVVVSGTSDQAHFAQSLLHAFI 617
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 145/352 (41%), Gaps = 95/352 (26%)
Query: 129 ESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG-TTERAVMISA----- 181
ESV FR+L PA + G+IIG+ G I+ + T ++I+++D P + ER V+I A
Sbjct: 17 ESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 182 --------KEEPESSLPPAMDG---------------------LLRVHKRIVDGLDSDSS 212
E P S P G LLRV +RIV G D+ S
Sbjct: 77 KDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASV 136
Query: 213 HAPSGTGGKVST--KLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQD 270
G+ + +++V +Q L+ K G ++ I+E S IVR+ + +P A
Sbjct: 137 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPG 196
Query: 271 DRVVE--VVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWG 328
D V++ + G S V KA+ LI + L++ S P P D P PQ
Sbjct: 197 DVVIQMKITGKFSSVKKALLLITNCLQE-----SGAP----------PTWDECPFPQ--- 238
Query: 329 PPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP-PMEKQPHQGISAYGREAPVNVH 387
PGY PP + Y+P D PP PM + P N
Sbjct: 239 ----------PGY-------PPDYHSMEYHPQWDHPPNPMPED----------VVPFN-- 269
Query: 388 GSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE 439
P + +V+ ++ P ++IG GA + ++ SGA++ + +
Sbjct: 270 -------RPVVEEEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSD 314
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP-----GEMTVE--ISGTASQ 457
+M + + D ++ G I IR SGA V I T +P G++ ++ I+G S
Sbjct: 151 RMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPGDVVIQMKITGKFSS 210
Query: 458 VQTAQQLIQNFMAEAAAPSQAQMGASADQGYNP-YASMYGSP----PSNP 502
V+ A LI N + E+ AP GY P Y SM P P NP
Sbjct: 211 VKKALLLITNCLQESGAPPTWDECPFPQPGYPPDYHSMEYHPQWDHPPNP 260
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 183/402 (45%), Gaps = 68/402 (16%)
Query: 120 EKKWPGW--PGESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERA 176
E PGW P + + FR+L ++VG IIG+ G IK + ET IK+LDG P + +R
Sbjct: 322 ESGMPGWMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRV 381
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ IS P+ + PA D +LRV RIV + P V +LLV ++Q G L
Sbjct: 382 IFISGSAHPDDRISPAQDAVLRVQSRIVRAI-------PDSKEKTVIARLLVSSTQIGCL 434
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR- 295
+GK G + +++ S +R+LG + +P A +++ VV++ G+ V +A+ I + LR
Sbjct: 435 LGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRH 494
Query: 296 -----KFLVDRSIIPLFEMHMQMPNPQMDHIPP------PQSWGPPQGLPPSGGPGYGHN 344
F V+ P F D +PP + + PP G+ + GP + H
Sbjct: 495 HHFRDAFSVNHPSNPAF----------TDQVPPFPPYLARREFSPP-GMYSNLGPSF-HK 542
Query: 345 PQYMPPPRQAESYYPPADLPPPM-------------EKQP------HQGI---------- 375
+ ++P D P M E++P HQG+
Sbjct: 543 FDAVGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGHQGLIEGGVPIGLA 602
Query: 376 -SAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGAT 434
A G + + G N Q ++IT T ++ +P S ++ G G + IR+ S A
Sbjct: 603 DFAGGPQRRIPGFGGGNQQ---AIITSTTVEVVVPRSLVPSIYGEDGGCLRQIRQISDAK 659
Query: 435 VTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF-MAEAAAP 475
+TI E + E + ISGT Q AQ LIQ F ++E +P
Sbjct: 660 ITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETESP 701
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 61/268 (22%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE--- 183
PG VFR+L PA K GS+IG+ G I +I +ET ++++ + G ER V+I+ +
Sbjct: 42 PGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDT 101
Query: 184 ------------------------EP-----------------ESSLPPAMDGLLRVHKR 202
EP E + LL V +R
Sbjct: 102 EADNEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFER 161
Query: 203 I------VDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVR 256
+ +G D DS+ +P+ +LLV +SQ G L+GK G +K + S +R
Sbjct: 162 MAEGESETNGGDEDSNKSPT-----FVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIR 216
Query: 257 VLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL-----RKFLVDRSIIPLFEMHM 311
+L + LP+ A D +V++ G+ +A++ I L R + + + H+
Sbjct: 217 ILPRDKLPLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHL 276
Query: 312 QM-PNPQMDHIPPPQSWGPPQGLPPSGG 338
P P+ + PPP P QG P + G
Sbjct: 277 FGPPLPRSEAQPPPNYSFPAQGAPYAAG 304
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 183/402 (45%), Gaps = 68/402 (16%)
Query: 120 EKKWPGW--PGESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERA 176
E PGW P + + FR+L ++VG IIG+ G IK + ET IK+LDG P + +R
Sbjct: 293 ESGMPGWMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRV 352
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ IS P+ + PA D +LRV RIV + P V +LLV ++Q G L
Sbjct: 353 IFISGSAHPDDRISPAQDAVLRVQSRIVRAI-------PDSKEKTVIARLLVSSTQIGCL 405
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR- 295
+GK G + +++ S +R+LG + +P A +++ VV++ G+ V +A+ I + LR
Sbjct: 406 LGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRH 465
Query: 296 -----KFLVDRSIIPLFEMHMQMPNPQMDHIPP------PQSWGPPQGLPPSGGPGYGHN 344
F V+ P F D +PP + + PP G+ + GP + H
Sbjct: 466 HHFRDAFSVNHPSNPAF----------TDQVPPFPPYLARREFSPP-GMYSNLGPSF-HK 513
Query: 345 PQYMPPPRQAESYYPPADLPPPM-------------EKQP------HQGI---------- 375
+ ++P D P M E++P HQG+
Sbjct: 514 FDAVGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGHQGLIEGGVPIGLA 573
Query: 376 -SAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGAT 434
A G + + G N Q ++IT T ++ +P S ++ G G + IR+ S A
Sbjct: 574 DFAGGPQRRIPGFGGGNQQ---AIITSTTVEVVVPRSLVPSIYGEDGGCLRQIRQISDAK 630
Query: 435 VTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF-MAEAAAP 475
+TI E + E + ISGT Q AQ LIQ F ++E +P
Sbjct: 631 ITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETESP 672
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 32/239 (13%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEP- 185
PG VFR+L PA K GS+IG+ G I +I +ET ++++ + G ER V+I+ ++
Sbjct: 42 PGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDT 101
Query: 186 --------------ESSLPPAMDGLLRVHKRI------VDGLDSDSSHAPSGTGGKVSTK 225
E + LL V +R+ +G D DS+ +P+ +
Sbjct: 102 EADNEQSKEDDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPT-----FVVR 156
Query: 226 LLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHK 285
LLV +SQ G L+GK G +K + S +R+L + LP+ A D +V++ G+ +
Sbjct: 157 LLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQ 216
Query: 286 AMELIGSHL-----RKFLVDRSIIPLFEMHMQM-PNPQMDHIPPPQSWGPPQGLPPSGG 338
A++ I L R + + + H+ P P+ + PPP P QG P + G
Sbjct: 217 ALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGAPYAAG 275
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 172/370 (46%), Gaps = 58/370 (15%)
Query: 117 GSTEKKWPGWP-GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTER 175
GS + P +P E +FR+L P K +++G + ++ + E +++ D G+ ER
Sbjct: 328 GSKFNEHPEFPYDEIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDER 387
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
V+I+++E P+ L PA + LL + IVD G D+D+ ++T+LLVP+S+
Sbjct: 388 TVIITSREGPDHELFPAQEALLHIQTHIVDLGPDNDNI---------ITTRLLVPSSEVA 438
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G+ G++ IQ ++ V++L E+LP AL+ D ++++VG A+ + + +
Sbjct: 439 CFEGRD-GSLSDIQRQTSANVQILPREELPSCALESDELIQIVGGIRAARSALMQVTTKI 497
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQA 354
R ++ M +PN I G +PP+ G G
Sbjct: 498 RSYIY---------REMSVPN----QIASINVHG---SIPPANGSPRG------------ 529
Query: 355 ESYYPPADLPPPMEKQPHQGISAY---------------GREAPVNVHGSSNAQSTPSMI 399
YP DLP + +Q Q +++ G ++ + + P ++
Sbjct: 530 --IYPGNDLPMAIYQQSQQMTTSWHSKDSGGSASGSFEQGSNINDDIRSTIKRFAVP-LV 586
Query: 400 TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
T+ T ++ IP S ++ AG+ ++ I SGA+VT+ E R E V ISGT Q
Sbjct: 587 TRSTLEVVIPKSAVASLSMRAGSKLAQISEMSGASVTLGEDRPGVMEKVVRISGTPEQAD 646
Query: 460 TAQQLIQNFM 469
AQ L+Q F+
Sbjct: 647 KAQSLLQGFI 656
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES---- 187
FR+L P K G FI K +++ A I I G R + + A P
Sbjct: 95 FRILCPESKT---YGFPASFIIKAQDDSGAIITIHAPFAGDPVRVIEM-ADGVPRDVDGR 150
Query: 188 --SLPPAMDGLLRVHKRIV----DGLDSDSSHAPSGTG----GKVSTKLLVPASQAGSLI 237
PA + L+ VH+RI+ D D D + P G GKV+T+L+VP G L+
Sbjct: 151 PPMFSPAQEALIMVHRRILETEPDDGDEDGEYGPRGKDARDRGKVTTRLVVPRLHVGCLL 210
Query: 238 GKQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
GK G ++ ++ + +R+L ++ P + VV++VG+ + V KA+ +I L++
Sbjct: 211 GKGGKIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGNCVKKAVAIISDRLKE 270
Query: 297 FL 298
L
Sbjct: 271 SL 272
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 169/371 (45%), Gaps = 45/371 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF++L +KVGS+IG+ G ++ + ET A I+I++ P + ER V+ISA+E E
Sbjct: 195 VFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISARETSEQKHS 254
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA + ++RVH R+ ++ PS V KLLV + Q G L+GK G + ++
Sbjct: 255 PAQEAVIRVHCRL-----TEIGFEPSAA---VVAKLLVRSPQVGCLLGKGGLVISEMRRV 306
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM- 309
+ +R+ E + + Q++ VV+V+G V A+ I S +R+ + P F
Sbjct: 307 TGASIRIFSKEQIKYIS-QNEEVVQVIGSLQSVQDALFHITSRIRETIFPIRTPPNFSAP 365
Query: 310 -HMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPP----PRQAESYYPPADLP 364
H+ + P++ G PP G+ H+ +PP +Q + P
Sbjct: 366 PHLPPFPEMPPPLFRPRNHLMSSGHPPPPQVGHPHDHSTVPPMPVDHQQHAFVHGMGRGP 425
Query: 365 PPMEKQPHQGISAYGREAP----------VNVHGSSNAQSTPSMITQ------------- 401
P M++ P+ G E P VN S T S+ ++
Sbjct: 426 PNMDRVPY----PRGYEGPNSPRSWNPLAVNRGNSGGTADTSSLASRNENLGENGNPLQN 481
Query: 402 ---VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
+T ++ IP Y V G ++++ IR++SGA V + + + E V +SG Q
Sbjct: 482 PNNLTIEITIPHMYLTHVYGENNSNLTQIRQTSGANVVVHDPKPGATEGLVIVSGAPDQT 541
Query: 459 QTAQQLIQNFM 469
AQ LIQ F+
Sbjct: 542 HAAQSLIQAFI 552
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 25/159 (15%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
++VFR++ PA K + G+ K +VE+ + ER V+I +E
Sbjct: 18 DAVFRIVCPAAKTEDVATIGGDGAKILVEDLVS----------AEERVVVIVGEESA--- 64
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A L+RV +R VD +S+ VS KL+ P+ Q G ++G+ G V+ I+
Sbjct: 65 ---AQVALVRVFERTVDEETKNST---------VSCKLVAPSYQVGCVLGRGGKIVEKIR 112
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
+ + +RVL + P+ + +++ G+ V KA+
Sbjct: 113 QDTGAHIRVLPKDQPPLPPPPGEEFIQITGNFGAVKKAV 151
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 62/339 (18%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA------- 181
++V+R L PA+K+GSIIGR GE IK++ +T+++I++ + PG ER V I +
Sbjct: 41 DTVYRYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNE 100
Query: 182 KEEPESSLPPAMDGLLRVHKRIVD---GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E+ + + PA D L RVH +++ ++ DS +P +V+ KLLVP+ Q G +IG
Sbjct: 101 YEDSGNYISPAQDALFRVHDKVIAEDLQVEDDSEGSP-----QVTAKLLVPSDQIGCIIG 155
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
K G V++I+ + ++R+L E LP AL D +V++ G+A+ + KA+ I S L
Sbjct: 156 KGGQIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDN- 214
Query: 299 VDRSIIPLFEMHM---QMPN--PQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQ 353
P H+ +PN + + P + P G+ P GP G
Sbjct: 215 ------PSRSQHLLVSAVPNVYSSVGSLVGPSAAAPIVGIAPLMGPYGGFKGD------- 261
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
D + P +++ + + ++ P +
Sbjct: 262 ------TGDWSRSLYSAPRDELAS----------------------KEFSLRVVCPTANI 293
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
AVIG G I+ IR+ SGAT+ + + + + IS
Sbjct: 294 GAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITIS 332
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 12/184 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P +G++IG+ G I +I +E+ A IK+ + + ISAKE +
Sbjct: 281 EFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIYDH- 339
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ +R+ R + ++ DS +T+LLVP+S+ G L+GK G + ++
Sbjct: 340 YSPTIEAAVRLQPRCSEKMERDSGLIS------FTTRLLVPSSRIGCLLGKGGAIIDEMR 393
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR-----SI 303
+ + I+R+ E+LP A DD +V++ GD A+ I LR + DR +I
Sbjct: 394 KLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVFDREGAMSAI 453
Query: 304 IPLF 307
+P+
Sbjct: 454 LPVL 457
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 99/161 (61%), Gaps = 9/161 (5%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE 174
A+G+ E G E+V+R+LV ++KVGS+IG+ G +K I +ET ARI++++G P E
Sbjct: 92 AIGAAE----GPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDE 147
Query: 175 RAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
R ++ISA+ + A + L +VH R+ + + H P +T++LV +QAG
Sbjct: 148 RVIVISARSDAARHTDAAQEALFKVHARVHE--HEEGPHPPPAN---ATTRMLVCHTQAG 202
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVE 275
LIGK G +K I+EAS +++L AEDLP L +DRVV+
Sbjct: 203 CLIGKAGAIIKEIREASGAHIKILPAEDLPPCGLSNDRVVQ 243
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 156/334 (46%), Gaps = 58/334 (17%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-------SA 181
++VFR L P +K+GS+IGR G+ +K++ +TR++I+I + PG ER + I +A
Sbjct: 49 DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
+ E L PA D L R+H R+V D+ S +P G +V+ KLLVP+ Q G ++G+ G
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVV-ADDARSEDSPEGE-KQVTAKLLVPSDQIGCILGRGG 166
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
V++I+ + +R++ ++P+ AL D ++++ G+ V KA+ I S L +
Sbjct: 167 QIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE----- 221
Query: 302 SIIPLFEMHMQMPNPQMDHIPPPQSWGPPQG--LPPSGGPGY-GHNPQYMPPPRQAESYY 358
NP S G P G + +GGP G P R A +
Sbjct: 222 -------------NPSRSQNLLSSSGGYPAGSLMSHAGGPRLVGLAPLMGSYGRDAGDWS 268
Query: 359 PPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
P PP R P P+ T+ ++ P+ +VIG
Sbjct: 269 RPLYQPP--------------RNDP------------PA--TEFFIRLVSPVENIASVIG 300
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
GA I+ +R+ + AT+ + +R + + IS
Sbjct: 301 KGGALINQLRQETRATIKVDSSRTEGNDCLITIS 334
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P + + S+IG+ G I ++ +ETRA IK+ + + ISA+E E +
Sbjct: 283 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 342
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ ++R+ + D ++ DS +T+LLVP+S+ G ++GK G + ++
Sbjct: 343 YSPTIEAVMRLQPKCSDKVERDSGLV------SFTTRLLVPSSRIGCILGKGGAIITEMR 396
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
+ +R+LG E+LP A DD +V+V + +++ + S LR F
Sbjct: 397 RMTKANIRILGKENLPKVASDDDEMVQVNFMVLLLKFSLQFLLSRLRYF 445
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 156/334 (46%), Gaps = 58/334 (17%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-------SA 181
++VFR L P +K+GS+IGR G+ +K++ +TR++I+I + PG ER + I +A
Sbjct: 49 DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
+ E L PA D L R+H R+V D+ S +P G +V+ KLLVP+ Q G ++G+ G
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVV-ADDARSEDSPEGE-KQVTAKLLVPSDQIGCILGRGG 166
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
V++I+ + +R++ ++P+ AL D ++++ G+ V KA+ I S L +
Sbjct: 167 QIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE----- 221
Query: 302 SIIPLFEMHMQMPNPQMDHIPPPQSWGPPQG--LPPSGGPGY-GHNPQYMPPPRQAESYY 358
NP S G P G + +GGP G P R A +
Sbjct: 222 -------------NPSRSQNLLSSSGGYPAGSLMSHAGGPRLVGLAPLMGSYGRDAGDWS 268
Query: 359 PPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
P PP R P P+ T+ ++ P+ +VIG
Sbjct: 269 RPLYQPP--------------RNDP------------PA--TEFFIRLVSPVENIASVIG 300
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
GA I+ +R+ + AT+ + +R + + IS
Sbjct: 301 KGGALINQLRQETRATIKVDSSRTEGNDCLITIS 334
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P + + S+IG+ G I ++ +ETRA IK+ + + ISA+E E +
Sbjct: 283 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 342
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ ++R+ + D ++ DS +T+LLVP+S+ G ++GK G + ++
Sbjct: 343 YSPTIEAVMRLQPKCSDKVERDSGLV------SFTTRLLVPSSRIGCILGKGGAIITEMR 396
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ +R+LG E+LP A DD +V++ G+ +A+ I S LR + DR
Sbjct: 397 RMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVFDR 449
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 154/345 (44%), Gaps = 78/345 (22%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-------SA 181
++VFR L P +K+GS+IGR GE +K++ +TR++I+I + PG ER + I +A
Sbjct: 43 DTVFRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDETNA 102
Query: 182 KEEPESSLPPAMDGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
+ E L PA D L R+H R+V D DSS +V+ KLLVP+ Q G ++G+
Sbjct: 103 FGDGEKVLSPAQDALFRIHDRVVADDAQSEDSSEGEQ----QVTAKLLVPSDQIGCILGR 158
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
G V++I+ + +R++ ++P+ AL D ++++ G+ V KA+ I S L
Sbjct: 159 GGQIVQNIRSETGAQIRIIKDRNMPLCALNSDELIQISGEVLIVKKALHQIASRLH---- 214
Query: 300 DRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQG--LPPSGGP----------GYGHNPQY 347
+ P+ + + S G P G + +GGP YG +
Sbjct: 215 ------------ENPSRSQNLLSSAISGGYPSGSLMSHAGGPRLVGIAPLMGSYGRDGGD 262
Query: 348 MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQ 407
P Y PP + PP T+ ++
Sbjct: 263 WSRP----LYQPPRNDPPA---------------------------------TEFFIRLV 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
P+ +VIG GA I+ +R+ + AT+ + +R + + IS
Sbjct: 286 SPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITIS 330
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P + + S+IG+ G I ++ +ETRA IK+ + + ISA+E E +
Sbjct: 279 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 338
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ ++R+ + + ++ DS +T+LLVP+S+ G ++GK G + ++
Sbjct: 339 YSPTIEAVMRLQPKCSEKVERDSGLV------SFTTRLLVPSSRIGCILGKGGAIITEMR 392
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ +R+LG E+LP A DD +V++ G+ +A+ I S LR + DR
Sbjct: 393 RMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVFDR 445
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 169/345 (48%), Gaps = 36/345 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR+L P K S++ + ++ + + +++ D + ER ++I+++E P+ L
Sbjct: 340 IFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITSREGPDHELF 399
Query: 191 PAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
PA + +L + IVD G D D+ ++T+LLVPAS+ G++G ++ IQ
Sbjct: 400 PAQEAVLHIQTHIVDLGPDMDN---------IITTRLLVPASEIACFDGREG-SLSDIQR 449
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
++ V++L EDLP AL+ D ++++VG+ A+ + + LR FL
Sbjct: 450 QTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFL----------- 498
Query: 310 HMQMPNP-QMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
+ +MP+P Q+ +I + P G P GP G++ +P +Y+ + L
Sbjct: 499 YREMPDPIQVGNINLHGAISPVAGSPR--GPYQGND---IP----MGAYHQASQLATSWH 549
Query: 369 KQPHQGISAYGREAPVNVHGSSNAQSTPS----MITQVTQQMQIPLSYADAVIGTAGASI 424
+ G ++ E N++ +T ++T+ T ++ IP S ++ AG+ +
Sbjct: 550 SKDSGGSASGSFEQGSNINDDIRQSATKRFAVPLVTRSTLEIVIPNSAVASLTMRAGSKL 609
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ I SGA VT+ E R + V ISGT Q A+ L+Q F+
Sbjct: 610 AQISEISGAAVTLAEDRSDILQKVVRISGTPEQASKAENLLQGFI 654
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
+T G + FR+L P K S F+ K+ +++ A + + PP +
Sbjct: 73 ATADGGAGSTATTSFRILCPECKAYSF---SPGFVAKVRDDSGALVTV--HPPFAGDYVR 127
Query: 178 MI----SAKEEPESSLP---PAMDGLLRVHKRIVD----GLDSDSSHAPSGTG----GKV 222
+I A+ E + P PA + LL VH+RI++ D D + P G GK
Sbjct: 128 VIETVDGARREADGCPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRGKT 187
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLG-AEDLPVFALQDDRVVEVVGDAS 281
+T+L+VP G L+GK G ++ ++ + +R+L + P + VV+VVGD +
Sbjct: 188 TTRLIVPKQHVGCLLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGN 247
Query: 282 GVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPS----G 337
V KA+ +I L++ L R P F + P P++ + G Q +P G
Sbjct: 248 CVKKAVAIITDRLKESL-HRDRGP-FRGRLNSPEPRISQ--EDEYLGGVQQMPAYVESLG 303
Query: 338 GPGYGHNPQYMPPP 351
GP N M PP
Sbjct: 304 GPDQIRNNISMEPP 317
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 105/176 (59%), Gaps = 12/176 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI------- 179
P ++V+R L P +K+GSIIGR GE +K++ +T+++I+I + PG ER V I
Sbjct: 40 PEDTVYRYLCPGRKIGSIIGRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDET 99
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHA-PSGTGGKVSTKLLVPASQAGSLIG 238
+A ++ ++ + PA D L RVH R+V S+ H S +V+ +LLVP+ Q G +IG
Sbjct: 100 NAFDDSDTFVSPAQDALFRVHDRVV----SEEVHGEDSEEASQVTVRLLVPSDQIGCVIG 155
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G ++SI+ S VR+L + LP AL D +V++ G+ S V KA+ I S L
Sbjct: 156 KGGQIIQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRL 211
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 7/174 (4%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM-ISAKEEPES 187
E R++ P +G +IG+ G I +I +E+ A IK+ + ++ ISAKE E
Sbjct: 281 EFSLRLVCPIGNIGGVIGKGGVIINQIRQESGAAIKVDSTSAAEADDCLIAISAKEFFED 340
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P ++ +R+ R + ++ DS +T+LLVP S+ G LIGK G + +
Sbjct: 341 TFSPTIEAAVRLQPRCSEKVERDSGIV------SFTTRLLVPTSRIGCLIGKGGAIITEM 394
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
++ + +R+L E+LP A +DD +V++ GD A+ + + LR L DR
Sbjct: 395 RKLTKANIRILSKENLPKVASEDDEMVQIAGDLDVAKDALIQVTTRLRANLFDR 448
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 386 VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP- 444
VHG + +++ QVT ++ +P VIG G I IR SGA V I + +P
Sbjct: 128 VHGEDSEEAS-----QVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDDHLPS 182
Query: 445 ----GEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPS 500
+ V+ISG S V+ A I + + + + SQ + ++ GY+ S+ G
Sbjct: 183 CALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLLASAVPTGYSSGGSLMGPTSG 242
Query: 501 NP--GHAGHAGGYGSVYG 516
P G A G YG G
Sbjct: 243 APIMGLAPLVGTYGGYRG 260
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 154/351 (43%), Gaps = 32/351 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
FRML P KVGSIIG+ G +K I +T IK+LD P T +R + IS P + P
Sbjct: 380 FRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSDGISP 439
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A + +L V ++I+ SD P+ + +L+V +Q G ++GK G + +++ S
Sbjct: 440 AQNAILHVQRKIMLP-SSDKKEGPA------TCRLIVSGNQVGCVLGKGGSIIAEMRKLS 492
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
+ VL + +P + D V+++ G + +A+ + + LR LF M
Sbjct: 493 GAFIVVLSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVTARLRNH--------LFRDRM 544
Query: 312 QMPNPQMDHIPPPQSWGPPQGLPPSGG--PGYGHNPQYMPPPRQA----ESYYPPADLPP 365
P M PP PQ P SG + +M P + DL
Sbjct: 545 PAVGPNMR---PPFGLLDPQFGPFSGNHESSSLFHKDFMGRPLDGIAAPWTVKGMRDLSD 601
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
P+ G A REA G PSM+ +T ++ +P + G G +
Sbjct: 602 PVSISDIPG--AGHREA-----GGFPGPGQPSMMPNLTAEVLVPRLVIPVLCGEDGGCLD 654
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF-MAEAAAP 475
IR S A +T+ E + V ISGT Q+ A+ L++ F M+E+ P
Sbjct: 655 RIREFSEAKITVAEPTADAMDTAVLISGTPEQMHAARSLVEAFVMSESFGP 705
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 115/282 (40%), Gaps = 51/282 (18%)
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
K EPE +P A+ + V RI ++ + S VS ++LV SQAG L+GK G
Sbjct: 193 KLEPERVIPLALKAVSLVFDRIFATEGNNETGNASAASAPVSLRMLVLYSQAGWLLGKGG 252
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
VK + + C +RVL ++LP AL +D++ ++ G+ V K + +
Sbjct: 253 SVVKQMAADNGCEIRVL-KDNLPSCALLNDKLCQITGEIDSVRKGLNAVS---------- 301
Query: 302 SIIPLFEMHMQMPNPQMDHIPPPQSWGP--------PQGLPPSGGPGYGHNPQYMPPPRQ 353
E+ + P + D + S G P GL PSG H P PP Q
Sbjct: 302 ------EVLLAHPPKETDAVADVHSSGSSSRSLFSQPDGL-PSGMQSNFHIP-LQGPPSQ 353
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
A + DL PP +HG ++ I ++ +M P
Sbjct: 354 ANGPFDIVDLQPP-------------------IHGHASVA-----IESLSFRMLCPQDKV 389
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA 455
++IG G + I+ +G + + +T + + ISG A
Sbjct: 390 GSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPA 431
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
PG +FR+L PA K G++IG+ G I KI +ETR RI++ PG ER + I+A + E
Sbjct: 42 PGVPIFRILCPASKSGNVIGKGGAIIAKIRQETRMRIRVDRAAPGCDERVIFITAANKDE 101
Query: 187 SS 188
+
Sbjct: 102 EA 103
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 164/369 (44%), Gaps = 60/369 (16%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFRM++ + VGSIIG+ G I+ + ET A IKIL+ + ER V I+A+E +
Sbjct: 249 EIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSDML 308
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA D ++RV+ RI + SSH P+ +LLVP+ G L+GK G + ++
Sbjct: 309 HSPAQDAVVRVYSRISEASIDRSSHTPA--------RLLVPSQHIGCLLGKGGSIISEMR 360
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + +R+ G E +P A ++D +V+V G + A+ I +R ++ + P
Sbjct: 361 KITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPK---PHPS 417
Query: 309 MHMQMPNPQMDHIPPPQSW--GPPQGLPPSGG-PGYGHNP-------------QYMPPPR 352
M P P + +IP QS PP L PSGG P Y +P + PPP
Sbjct: 418 GGMP-PYPPVGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPFRPDAPMGHFEMGDHRPPPV 476
Query: 353 QAESYYPPADL----------PPPMEKQPHQGIS-----AYGREAPVNVHGS-------- 389
+ Y + P P +QP E P N+ +
Sbjct: 477 HSMEYMGADRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRNMSDAVPATDFRK 536
Query: 390 -----SNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
N +TP+ T+V IP +Y V G G+ I I + SGA++T+ + +
Sbjct: 537 GPVAIENQVATPTGTTEVI----IPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKAGD 592
Query: 445 GEMTVEISG 453
V I G
Sbjct: 593 ANSKVVICG 601
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 45/236 (19%)
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVG 278
G V ++L Q G ++GK G TV+ +++ +RV E LP +A D ++ + G
Sbjct: 107 GAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIHISG 166
Query: 279 DASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGG 338
S V KA+ + + L+ P P +IP G P GLP G
Sbjct: 167 SFSQVRKALLAVSTCLQ----------------DNPRPDTHNIP----IGRPFGLP---G 203
Query: 339 PGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSM 398
G G P P SY PP +P + R P N P
Sbjct: 204 SGTGCPPGM--DPHSQRSYLPP-HIP-----------DYHTRNYPSNA-----GPPGPRF 244
Query: 399 IT--QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
++ +M I ++IG G++I ++ +GA + I E E V I+
Sbjct: 245 FFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAIT 300
>gi|413933626|gb|AFW68177.1| hypothetical protein ZEAMMB73_133887 [Zea mays]
Length = 282
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 69/91 (75%), Gaps = 10/91 (10%)
Query: 99 PEDSQLQEKQENEV--------NLAVGSTE-KKWPGWPGESVFRMLVPAQKVGSIIGRKG 149
P DS QE+QEN NL V + + KWPGWPGESVFR+LVPAQKVG+IIGRKG
Sbjct: 192 PADS-YQEEQENAFSGGINQQDNLQVNNVDDNKWPGWPGESVFRILVPAQKVGAIIGRKG 250
Query: 150 EFIKKIVEETRARIKILDGPPGTTERAVMIS 180
EFIKK+ EET+ARIKILDGPPG ERAV+ +
Sbjct: 251 EFIKKMCEETKARIKILDGPPGVPERAVVTA 281
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 113/192 (58%), Gaps = 16/192 (8%)
Query: 117 GSTEKKWPG------WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
G +++ PG P ++V+R L P++K+GSIIGR GE K++ +T+A+I+I +
Sbjct: 21 GGGKRRNPGDDTYAPGPDDTVYRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVS 80
Query: 171 GTTERAVMI--SAKE-----EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG-GKV 222
G ER + I S++E + E + PA D L RVH+++ +D D + S G +V
Sbjct: 81 GCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEKL--SIDDDIGNEESDEGLAQV 138
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
+ +LLVP+ Q G +IGK G ++ I+ + +RVL E+LP A+ D ++++ GD++
Sbjct: 139 TVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTV 198
Query: 283 VHKAMELIGSHL 294
V KA+ + S L
Sbjct: 199 VRKALLQVSSRL 210
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 7/173 (4%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R+L A VG +IG+ G IK+I +E+ A IK+ D + + +SAKE E
Sbjct: 279 EFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKV-DSSNTEDDCIITVSAKEFFEDP 337
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ P ++ + + R + D +S+ PS T T+LLV S+ G LIGK G + I+
Sbjct: 338 VSPTINAAVHLQPRCSEKTDPESA-IPSYT-----TRLLVSTSRIGCLIGKGGSIITEIR 391
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
S +R+L E++P A +D+ +V++ GD V A+ I + L+ +R
Sbjct: 392 RTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFFER 444
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP-----GEMTVEISG 453
+ QVT ++ +P +IG G I IR +GA + + +P G+ ++ISG
Sbjct: 135 LAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISG 194
Query: 454 TASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
++ V+ A + + + + + SQ + +S Q Y P S GS + P
Sbjct: 195 DSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPY-PVGSHLGSSSTAP 242
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 113/192 (58%), Gaps = 16/192 (8%)
Query: 117 GSTEKKWPG------WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
G +++ PG P ++V+R L P++K+GSIIGR GE K++ +T+A+I+I +
Sbjct: 21 GGGKRRNPGDDTYAPGPDDTVYRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVS 80
Query: 171 GTTERAVMI--SAKE-----EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG-GKV 222
G ER + I S++E + E + PA D L RVH+++ +D D + S G +V
Sbjct: 81 GCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEKL--SIDDDIGNEESDEGLAQV 138
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
+ +LLVP+ Q G +IGK G ++ I+ + +RVL E+LP A+ D ++++ GD++
Sbjct: 139 TVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTV 198
Query: 283 VHKAMELIGSHL 294
V KA+ + S L
Sbjct: 199 VRKALLQVSSRL 210
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 7/173 (4%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R+L A VG +IG+ G IK+I +E+ A IK+ D + + +SAKE E
Sbjct: 279 EFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKV-DSSNTEDDCIITVSAKEFFEDP 337
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ P ++ + + R + D +S+ PS T T+LLV S+ G LIGK G + I+
Sbjct: 338 VSPTINAAVHLQPRCSEKTDPESA-IPSYT-----TRLLVSTSRIGCLIGKGGSIITEIR 391
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
S +R+L E++P A +D+ +V++ GD V A+ I + L+ +R
Sbjct: 392 RTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFFER 444
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP-----GEMTVEISG 453
+ QVT ++ +P +IG G I IR +GA + + +P G+ ++ISG
Sbjct: 135 LAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISG 194
Query: 454 TASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
++ V+ A + + + + + SQ + +S Q Y P S GS + P
Sbjct: 195 DSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPY-PVGSHLGSSSTAP 242
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 105/174 (60%), Gaps = 11/174 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
++VFR L P +K+GSIIGR GE +K++ ET+A+I+I + PG ER V + + + ++
Sbjct: 46 DTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNT 105
Query: 189 L-------PPAMDGLLRVHKRIV-DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQ 240
+ PA D L ++H R+V + L SD G +V+ KLLVP+ Q G ++GK
Sbjct: 106 VDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEE---GGPQVNAKLLVPSDQIGCVLGKG 162
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G V++++ + +R+L + +P AL+ D +V++ GDA+ V KA+ I S L
Sbjct: 163 GQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRL 216
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 15/197 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P +G +IG+ G I +I +++ A IK+ D + + IS KE E +
Sbjct: 288 EFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKV-DSSAKGDDCLITISTKEFFEET 346
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ + + R S+ S SG +T+LLV +S+ G LIGK G + ++
Sbjct: 347 FSPTVEAAVLLQPRC-----SEKSERDSGII-SFTTRLLVSSSRIGCLIGKGGSIITEMR 400
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR-SIIPLF 307
+ +R+L E+LP A DD +V++ GD A+ + + LR L DR +P F
Sbjct: 401 RLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGF 460
Query: 308 EMHMQMPNPQMDHIPPP 324
P + +IP P
Sbjct: 461 L-------PVLPYIPAP 470
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 166/360 (46%), Gaps = 40/360 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
FR+L P++ VG++IG+ G IK + +ET + IK+++ PG+ + ++IS P+ + P
Sbjct: 314 FRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPAHPDDRISP 373
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + RV RI + H+ + +++V + G L+GK G + ++ S
Sbjct: 374 VQEAIFRVQNRISRAMLDSKEHS-------MLARVIVSSKHIGCLLGKGGSIIAEMRNLS 426
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
+R+LG + P +DD V++V G VH A+ I + LR R P +
Sbjct: 427 GAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRNNFF-RDAFP--SANF 483
Query: 312 QMPNPQMD-HIPPPQSWGPPQGLPPSG-----GPGYGHN--PQYMPPPRQAESYYPPADL 363
+ +D H P P G +GL P G GP + H P PP Y + +
Sbjct: 484 PSNSAFLDQHSPFPPYLG-RRGLSPPGMYSDLGPRHPHADFPLDDHPPFMNNMYR--SGI 540
Query: 364 PPPM-EKQP-----------HQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
PP + E++P H G+ + P + G + S P +IT T ++ +P +
Sbjct: 541 PPLISERKPWGPKGILEGGGHMGLPEFA-GGPRRISGFAGG-SQP-IITSTTVEVVVPRA 597
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQTAQQLIQNFM 469
+ G G + I + S A V I T +PG E + ISGT Q AQ LIQ F+
Sbjct: 598 LVAEIYGENGECLKQILQISDANVII--TDPIPGAVETKIIISGTPEQTNAAQSLIQAFV 655
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 156/406 (38%), Gaps = 104/406 (25%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM------------ 178
VFR+L PA K+G +IG+ G I +I ET ++KI + PG ER +
Sbjct: 33 VFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLKESEEGSAEQ 92
Query: 179 ---ISAKEEPESSL-------------------------------PPAMDGLLRVHKRIV 204
++ +E ES + P M ++ V +R+
Sbjct: 93 GKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVEDSQSEKVNSNPTIMRAVMLVFERVA 152
Query: 205 DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP 264
+ D S G +LL+ ++Q G ++GK G +K + S +R+L E++P
Sbjct: 153 EDEGGDESKK-----GYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRILPKEEIP 207
Query: 265 VFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPP 324
A D +V++ G V +A++ + L + N DH P
Sbjct: 208 ACASDSDELVQITGGVEVVRRALQSVFQQL------------------VENSPRDHESLP 249
Query: 325 QSWGPPQG-----LPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYG 379
+ P PP+ G + P + ++ PM + H+G + G
Sbjct: 250 TNLTGPSSHSYGQFPPNKRTFAGQGASFATGPNEIPVFH-----SAPMIPKFHEG-AILG 303
Query: 380 REAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE 439
R P P I +T ++ P +IG G+ I +++ + + + + E
Sbjct: 304 RMRP------------PPEI--LTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIE 349
Query: 440 TRGVPG--EMTVEISGTA------SQVQTAQQLIQNFMAEAAAPSQ 477
+PG + + ISG A S VQ A +QN ++ A S+
Sbjct: 350 A--IPGSEDCIIIISGPAHPDDRISPVQEAIFRVQNRISRAMLDSK 393
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 105/174 (60%), Gaps = 11/174 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
++VFR L P +K+GSIIGR GE +K++ ET+A+I+I + PG ER V + + + ++
Sbjct: 46 DTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNT 105
Query: 189 L-------PPAMDGLLRVHKRIV-DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQ 240
+ PA D L ++H R+V + L SD G +V+ KLLVP+ Q G ++GK
Sbjct: 106 VDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEE---GGPQVNAKLLVPSDQIGCVLGKG 162
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G V++++ + +R+L + +P AL+ D +V++ GDA+ V KA+ I S L
Sbjct: 163 GQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRL 216
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P +G +IG+ G I +I +++ A IK+ D + + IS KE E +
Sbjct: 288 EFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKV-DSSAKGDDCLITISTKEFFEET 346
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ + + R + + DS +T+LLV +S+ G LIGK G + ++
Sbjct: 347 FSPTVEAAVLLQPRCSEKSERDSGII------SFTTRLLVSSSRIGCLIGKGGSIITEMR 400
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR-SIIPLF 307
+ +R+L E+LP A DD +V++ GD A+ + + LR L DR +P F
Sbjct: 401 RLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGF 460
Query: 308 EMHMQMPNPQMDHIPPP 324
P + +IP P
Sbjct: 461 L-------PVLPYIPAP 470
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 148/323 (45%), Gaps = 59/323 (18%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK------ 182
++VFR L P +K+GS+IGR G+ +K++ +T+A+I+I D PG ER V I +
Sbjct: 43 DTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNH 102
Query: 183 -EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
+E + + PA D L RVH+R++ D+ V+ KLLVP+ Q G +IGK G
Sbjct: 103 FDETDDLVSPAQDALFRVHQRVI---AEDAREDEDEERNHVTAKLLVPSDQIGCVIGKGG 159
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
V++I+ + +R+L + LP AL D +V++ G+A+ V KA+ I + +R
Sbjct: 160 QIVQNIRSETGAQIRILKDDRLPPCALSTDELVQISGEAAVVKKALFQIAAQIRD----- 214
Query: 302 SIIPLFEMHMQMPNP-QMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPP 360
NP + H+ P G +GGPG G
Sbjct: 215 -------------NPSRSQHLLAS---AVPGGY-ATGGPGAG------------------ 239
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTP---SMITQVTQQMQIPLSYADAVI 417
P M P G AYG S + P + + + + + P VI
Sbjct: 240 ---APIMGVAPFVG--AYGGYKGDTGDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVI 294
Query: 418 GTAGASISYIRRSSGATVTIQET 440
G GA I+ IR+ SGAT+ + +
Sbjct: 295 GKGGAIINQIRQDSGATIKVDSS 317
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R + P +G +IG+ G I +I +++ A IK+ + ++IS KE E S
Sbjct: 278 EFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFEDS 337
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ +R+ R + ++ DS +T+LLVP S+ G LIGK G V ++
Sbjct: 338 FSPTIEAAVRLQPRCSEKVERDSGIVS------FTTRLLVPTSRIGCLIGKGGTIVTEMR 391
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ +R+L ++LP A +DD +V++ GD A+ + LR L D+
Sbjct: 392 RLTKANIRILSKDNLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANLFDK 444
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 23/196 (11%)
Query: 117 GSTEKKWPGWPGE--------SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG 168
G ++++ PG E +V+R L P +K+GSIIGR G+ K++ ET++ I+I +
Sbjct: 88 GGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGET 147
Query: 169 PPGTTERAVMISAKEEPES-------SLPPAMDGLLRVHKRIVDG---LDSDSSHAPSGT 218
PG ER V I + E + + PA D L RVH RIV G D + A
Sbjct: 148 MPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQ--- 204
Query: 219 GGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVG 278
+V+ ++LVP+ Q G +IGK G +++I+ + +R+L E LP AL D +++++G
Sbjct: 205 --QVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLPPCALSSDELLQIIG 262
Query: 279 DASGVHKAMELIGSHL 294
DAS V KA+ + S L
Sbjct: 263 DASVVRKALHQLASRL 278
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 157 EETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS 216
+E+ A IK+ + + ISAKE E P +D LR+ R + + +SS +
Sbjct: 347 QESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEKAERESSDSV- 404
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
V+T+LLVP+S+ G LIGK G + ++ + +R+L E+LP A +DD +V++
Sbjct: 405 -----VTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQI 459
Query: 277 VGDASGVHKAMELIGSHLRKFLVDR 301
G+ + A+ + L+ L +R
Sbjct: 460 TGELNVASNALLQVTLRLKANLFER 484
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 101/174 (58%), Gaps = 10/174 (5%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
++VFR L P +K+GS+IGR G+ +K++ +T+A+I+I D PG ER V I + E +
Sbjct: 43 DTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNH 102
Query: 189 L-------PPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
PA D L RVH+R++ D+ V+ KLLVP+ Q G +IGK G
Sbjct: 103 FDETGDLVSPAQDALFRVHQRVIA---EDAREDEDDERNHVTAKLLVPSDQIGCVIGKGG 159
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V++I+ + +R+L + LP AL +D +V++ G+A+ V KA+ I + +R
Sbjct: 160 QIVQNIRSETGAQIRILKDDRLPPCALSNDELVQISGEAAVVKKALFQIAAQIR 213
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R + P +G +IG+ G I +I +++ A IK+ + ++IS KE E S
Sbjct: 278 EFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISMKEFFEDS 337
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ +R+ R + ++ DS +T+LLVP S+ G LIGK G V ++
Sbjct: 338 FSPTIEAAVRLQPRCSEKVERDSGIVS------FTTRLLVPTSRIGCLIGKGGTIVTEMR 391
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ +R+L E+LP A +DD +V++ GD A+ + LR L D+
Sbjct: 392 RLTKANIRILSKENLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANLFDK 444
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 150/340 (44%), Gaps = 63/340 (18%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-------SA 181
++V+R + P +K+GS+IGR GE +K++ ET+A+I+I + PG ER V I +A
Sbjct: 41 DTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETNA 100
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK--VSTKLLVPASQAGSLIGK 239
E + + PA D L +VH R+V ++ H G V+ KLLVP+ Q G +IGK
Sbjct: 101 VEGGGNYVSPAQDALFKVHDRVV----AEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGK 156
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
G V++I+ + +R+L + LP+ AL D +V++ GDAS V KA+ I S L
Sbjct: 157 GGSIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDN-- 214
Query: 300 DRSIIPLFEMHMQMPN-----PQMDHIPPPQSWGPPQGLPPSGGP--GYGHNPQYMPPPR 352
P H+ P + P + P G+ P G GY + PP
Sbjct: 215 -----PSRSQHLLTSAVPGVYPAGGSLIGPGAGAPIVGIAPLVGAYGGYKGDTGDWPPRS 269
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
Y P D EA + + ++ P
Sbjct: 270 M---YSAPRD------------------EASTK---------------EFSVRLVCPTGN 293
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
VIG G I+ IR+ SGAT+ + + E + IS
Sbjct: 294 IGGVIGKGGMIINQIRQESGATIKVDSSTTEGDECLIAIS 333
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P +G +IG+ G I +I +E+ A IK+ E + IS KE E +
Sbjct: 282 EFSVRLVCPTGNIGGVIGKGGMIINQIRQESGATIKVDSSTTEGDECLIAISTKEFFEET 341
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ +R+ R + ++ DS +T+LLVP S+ G LIGK G + ++
Sbjct: 342 FSPTIEAAVRLQPRCSEKVERDSGII------SFTTRLLVPTSRIGCLIGKGGSIITEMR 395
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ +R++ E+LP A +DD +V++ GD A+ + + LR L DR
Sbjct: 396 RLTKANIRIISKENLPKIASEDDEMVQISGDLDIAKDALVHVLTRLRANLFDR 448
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 23/196 (11%)
Query: 117 GSTEKKWPGWPGE--------SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG 168
G ++++ PG E +V+R L P +K+GSIIGR G+ K++ ET++ I+I +
Sbjct: 22 GGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGET 81
Query: 169 PPGTTERAVMISAKEEPES-------SLPPAMDGLLRVHKRIVDG---LDSDSSHAPSGT 218
PG ER V I + E + + PA D L RVH RIV G D + A
Sbjct: 82 MPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQ--- 138
Query: 219 GGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVG 278
+V+ ++LVP+ Q G +IGK G +++I+ + +R+L E LP AL D +++++G
Sbjct: 139 --QVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLPPCALSSDELLQIIG 196
Query: 279 DASGVHKAMELIGSHL 294
DAS V KA+ + S L
Sbjct: 197 DASVVRKALHQLASRL 212
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 157 EETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS 216
+E+ A IK+ + + ISAKE E P +D LR+ R + + +SS +
Sbjct: 281 QESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEKAERESSDSV- 338
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
V+T+LLVP+S+ G LIGK G + ++ + +R+L E+LP A +DD +V++
Sbjct: 339 -----VTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQI 393
Query: 277 VGDASGVHKAMELIGSHLRKFLVDR 301
G+ + A+ + L+ L +R
Sbjct: 394 TGELNVASNALLQVTLRLKANLFER 418
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 168/377 (44%), Gaps = 66/377 (17%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E +FR+L P K GS+IGR GE I++I ET A++K+ + ER + +S+ ++ +
Sbjct: 342 EIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSNDDGLAP 401
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ A L RV++ IV DS S P + +LLV SQ G LIGK G ++ I+
Sbjct: 402 MLAAQVALFRVYRCIV---DSSGSDVP------LPFRLLVQTSQIGCLIGKGGSIIRQIR 452
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVV---GDASGVHKAMELIGSHLRKFLVDRSIIP 305
+ VRVL ++ LP A DD ++E+ DA + + ++ LR +
Sbjct: 453 NETGATVRVLPSDALPACANADDELLEIGQWPADACAL--GIRIVSGRLRGNM------- 503
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
H ++ S P + Q P +Q+E
Sbjct: 504 ---RHKAAERLNVESNVYSASMTPTMAV------------QDTPTLQQSELMM------- 541
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQST-----PSMITQVTQQMQIPLSYADAVIGTA 420
G++AY E PV+ +S + S P + T + M I + +V+G
Sbjct: 542 -------YGMTAYETE-PVDTALASLSLSAPPVEIPGVTTVNSVHMTISSQHIGSVLGRG 593
Query: 421 GASISYIRRSSGATVTIQ--------ETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEA 472
G +IS R+ SGA + + R E +EISGT+ QV +AQ +I+ F+A +
Sbjct: 594 GCNISIARQVSGARIKLYPGASGRNGARRAQDSERLLEISGTSEQVSSAQTIIERFIASS 653
Query: 473 AA--PSQAQMGASADQG 487
A P A +G + + G
Sbjct: 654 GAMIPEFASLGIAGNSG 670
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 50/223 (22%)
Query: 125 GWPGE------SV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
GW E SV FR+L P ++G +IG++G IK + ET AR+K+ G ER V
Sbjct: 58 GWATEGGRVNASVQFRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVV 117
Query: 178 MISAKEE--------PESSLPPAMDGLLRVHKRI-------VDGL-DSDSSHAPSG---- 217
++++ EE + + A L R+ + +DG D SS + SG
Sbjct: 118 LVASGEELMMDDGDGSDVPVTTAERALFRIFDTVASESGGALDGTRDGTSSESGSGVPES 177
Query: 218 --TGGKVS---------TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
TGG+ S +LLVP +Q GSLIGK G + +I+ +S VR++ A LP
Sbjct: 178 SSTGGERSMNGGRAVPICRLLVPRAQVGSLIGKGGAVISAIRASSGATVRLMPATMLPTC 237
Query: 267 ALQDDRVVEV---VGDASG---------VHKAMELIGSHLRKF 297
A + D ++++ V D G V A+ ++ +LR++
Sbjct: 238 ASRGDELLQITAPVRDTDGNDVDLALASVKSALRMVAKNLREY 280
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 188/459 (40%), Gaps = 86/459 (18%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-------SA 181
++V+R L P +K+GS+IGR GE +K++ +T+++I+I + PG+ ER + I ++
Sbjct: 42 DTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNS 101
Query: 182 KEEPESSLPPAMDGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
EE + PA + L ++H R+V D +D DS G G +V+ +LLVP+ Q G +IGK
Sbjct: 102 LEESSDYVSPAQEALFKIHDRVVADDYMDEDSE----GGGHQVTARLLVPSDQIGCIIGK 157
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
G V++I+ + VR+L + LP AL D +V++ G+ V KA+ I S L
Sbjct: 158 GGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDN-- 215
Query: 300 DRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ------YMPPPRQ 353
P H+ IP S G P G P G P Y P
Sbjct: 216 -----PSRSQHLLAS-----AIPGVYSSGGSLMAPTHGAPIMGLAPLVSPYGGYKAPRED 265
Query: 354 AESYYPPADLPPPME-------------KQPHQGISAY---------GREAPVNVHGSSN 391
S L P E Q Q A G + +N+
Sbjct: 266 LSSKEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEF 325
Query: 392 AQSTPSMITQVTQQMQ---------------------IPLSYADAVIGTAGASISYIRRS 430
+ + S + ++Q +P S +IG GA I+ +RR
Sbjct: 326 FEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRL 385
Query: 431 SGATVTIQETRGVP-----GEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASAD 485
+ A + I +P + V+ISG + A++ + + + A + GA +
Sbjct: 386 TKANIRILSKENLPKVALEDDEMVQISG---DLDVAKEALVHIVTRLRANLFDREGALSA 442
Query: 486 QG----YNPYASMYGSPPSNPGHAGHAGGYGSVYGSNYG 520
Y P ++ S G G G G Y S YG
Sbjct: 443 VLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYG 481
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 188/459 (40%), Gaps = 86/459 (18%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-------SA 181
++V+R L P +K+GS+IGR GE +K++ +T+++I+I + PG+ ER + I ++
Sbjct: 42 DTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNS 101
Query: 182 KEEPESSLPPAMDGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
EE + PA + L ++H R+V D +D DS G G +V+ +LLVP+ Q G +IGK
Sbjct: 102 LEESSDYVSPAQEALFKIHDRVVADDYMDEDSE----GGGHQVTARLLVPSDQIGCIIGK 157
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
G V++I+ + VR+L + LP AL D +V++ G+ V KA+ I S L
Sbjct: 158 GGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDN-- 215
Query: 300 DRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ------YMPPPRQ 353
P H+ IP S G P G P G P Y P
Sbjct: 216 -----PSRSQHLLAS-----AIPGVYSSGGSLMAPTHGAPIMGLAPLVSPYGGYKAPRED 265
Query: 354 AESYYPPADLPPPME-------------KQPHQGISAY---------GREAPVNVHGSSN 391
S L P E Q Q A G + +N+
Sbjct: 266 LSSKEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEF 325
Query: 392 AQSTPSMITQVTQQMQ---------------------IPLSYADAVIGTAGASISYIRRS 430
+ + S + ++Q +P S +IG GA I+ +RR
Sbjct: 326 FEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRL 385
Query: 431 SGATVTIQETRGVP-----GEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASAD 485
+ A + I +P + V+ISG + A++ + + + A + GA +
Sbjct: 386 TKANIRILSKENLPKVALEDDEMVQISG---DLDVAKEALVHIVTRLRANLFDREGALSA 442
Query: 486 QG----YNPYASMYGSPPSNPGHAGHAGGYGSVYGSNYG 520
Y P ++ S G G G G Y S YG
Sbjct: 443 VLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYG 481
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 110/187 (58%), Gaps = 21/187 (11%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-SAKEEP 185
P E+++R+L PA+K+GS++GR G+ +K + EET+A+I++ D PG ER ++I + + +P
Sbjct: 40 PIETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQP 99
Query: 186 E--------------SSLPP---AMDGLLRVHKRIV-DGLDSDSSHAPSGTGGKVSTKLL 227
E ++ P A D LL++H +IV D + + +H S V+ ++L
Sbjct: 100 ELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSD--DVTARIL 157
Query: 228 VPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
V +Q G L+GK G ++ ++ + +RVL +E+LP ALQ D +V++ G S V KA+
Sbjct: 158 VQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKAL 217
Query: 288 ELIGSHL 294
I + L
Sbjct: 218 YEISTRL 224
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 31/252 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E R+L ++ +GS+IG+ G ++++ ++T ARIK+ + + ER +++S+ E P
Sbjct: 289 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTE 348
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P ++ L+ +H ++ S+ H+ ST+L+VP+++ G ++G+ G + +
Sbjct: 349 PISPTIEALILLHDKV--SASSEKHHS--------STRLVVPSNKVGCILGEGGQVITEM 398
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRS---- 302
+ + +RV D P + D +V+V G + A+ I S LR + L D S
Sbjct: 399 RRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLRTRTLRDTSTANN 458
Query: 303 ---IIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLP---PSGGPGYGHNPQYMPP---PRQ 353
P + + MP+ ++ GP P P+ P YG P PP P
Sbjct: 459 PPPFAPSDDPTVDMPSRKLTLY-----GGPTNDTPYGRPANDPLYGR-PAIDPPFGRPTN 512
Query: 354 AESYYPPADLPP 365
Y PA +PP
Sbjct: 513 DRPYGRPAIVPP 524
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 381 EAPVNVHGSSNAQSTPSMITQV--TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQ 438
EA +HG + + PS + T +++IP S ++++G G +++ IR+ SGA + +
Sbjct: 657 EAAGQIHGLEDYRGLPSASGRFSSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLH 716
Query: 439 ETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
E E VEI GT Q + AQ L++ F++
Sbjct: 717 EAHAGSSESVVEIQGTLDQAKAAQSLLEGFIS 748
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 108/193 (55%), Gaps = 18/193 (9%)
Query: 117 GSTEKKWPG------WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
G ++++ PG P ++V+R L ++K+GSIIGR GE K++ ET+A+I+I + P
Sbjct: 19 GGSKRRNPGDDTYAPGPDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVP 78
Query: 171 GTTERAVMISAKEE-------PESSLPPAMDGLLRVHKRIV--DGLDSDSSHAPSGTGGK 221
G ER V I + E + PA D L RVH+R+ +GL ++ S S +
Sbjct: 79 GCDERVVTIFSTSRKTNTIDGAEDEVCPAQDALFRVHERLASDEGLGNEDSEEISP---Q 135
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
V+ +LLVP+ Q G +IGK G ++ I+ + +RVL + +P A+ D ++++ GD
Sbjct: 136 VTVRLLVPSDQIGCIIGKGGQIIQGIRSETGAQIRVLSNDHIPACAISGDELLQISGDTV 195
Query: 282 GVHKAMELIGSHL 294
V KA+ + S L
Sbjct: 196 VVRKALHQVSSRL 208
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM-ISAKEEPES 187
E R+L A VG +IG+ G IK+I +E+ A IK+ + ++ +SAKE E
Sbjct: 277 EFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFED 336
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P +D +R+ R + D +S+ +T+LLV S+ G LIGK G + I
Sbjct: 337 PVSPTIDAAVRLQPRCSEKSDLESAEQ------SYTTRLLVSTSRIGCLIGKGGSIITEI 390
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ S VR+L E++P A +DD +V++ G A+ I + L+ +R
Sbjct: 391 RRTSRANVRILSKENVPKVAAEDDEMVQITGGLDVARNALVQIATRLKANFFER 444
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 119/235 (50%), Gaps = 38/235 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI------- 179
P E+V+R+L P +K+GS++GR G +K + EET+A+I++ D PG ER ++I
Sbjct: 43 PIETVYRILCPGKKIGSVLGRGGHIVKALREETKAKIRVADSIPGAEERVIIIFDYQDQS 102
Query: 180 SAKEEPESSLPP------------AMDGLLRVHKRIVDGLD--SDSSHAPSGTGGKVSTK 225
+E ++ A D LL++H +I D + H S T V+ +
Sbjct: 103 EQTDEAAQNISNNDGSENMKLQCFAQDALLKIHDKISTHEDPHDGAIHEKSETAADVTAR 162
Query: 226 LLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHK 285
+LVP +Q G L+GK G ++ ++ + +R+L ++DLP ALQ D +V++ G S V K
Sbjct: 163 ILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRILPSQDLPQCALQSDELVQISGAPSLVRK 222
Query: 286 AMELIGSHLRKF----------LVDRSII-------PLFEMHMQMPNPQMDHIPP 323
A+ I + L + ++D S PL ++ +P +D +PP
Sbjct: 223 ALYEISTRLHQHPRKENPPLEEIIDASTQRKRESPPPLPHENLMLPYQHVDRLPP 277
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPPGTTERAVMISAKEEPE 186
E R+L ++ +G +IG+ G ++++ ++T ARI + LD + ER +++S+KE P
Sbjct: 298 EFSVRILCASELIGPVIGKSGANVRQVEQQTGARILVQELDKD-ASGERLIVLSSKEIPG 356
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ PA++ L+ +H ++ S+ H + T+L+VP+S+ G ++G+ G +
Sbjct: 357 DPVSPAIEALILLHSKV--SASSEKRH--------LITRLVVPSSKVGCILGEGGKVITE 406
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
++ +RV D P + D+ +V+V G A+ I S LR
Sbjct: 407 MRRRIGAEIRVYSKADKPKYLSFDEELVQVAGPPDIARDALTEIASRLR 455
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 381 EAPVNVHGSSNAQSTPSMI--TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQ 438
EA +HG + Q + + + ++ IP S +V+G G +++ IR+ SGA + +
Sbjct: 664 EAARQMHGREDYQRLAGVTGYSSSSLELMIPNSSLGSVLGAGGVNLAEIRQISGARMKLL 723
Query: 439 ETRGVPG--EMTVEISGTASQVQTAQQLIQNFM 469
E G PG E +EI G QV+ AQ L+Q F+
Sbjct: 724 E--GHPGSSESIMEIQGMPDQVRAAQSLLQGFI 754
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 103/175 (58%), Gaps = 13/175 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-------SA 181
++V+R + P +K+GS+IGR GE +K++ ET+A+I+I + PG ER V I +A
Sbjct: 41 DTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNA 100
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK--VSTKLLVPASQAGSLIGK 239
E + + PA D L +VH R+V ++ H G V+ KLLVP+ Q G +IGK
Sbjct: 101 VEGGGNYVSPAQDALFKVHDRVV----AEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGK 156
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G V++I+ + +R+L + LP+ AL D +V++ GDA+ V KA+ I S L
Sbjct: 157 GGSIVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRL 211
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P +G +IG+ G I +I +++ A IK+ E + IS KE E +
Sbjct: 282 EFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKEFFEET 341
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ +R+ R + ++ DS +T+LLVP ++ G LIGK G + ++
Sbjct: 342 FSPTIEAAVRLQPRCSEKVERDSGII------SFTTRLLVPTTRIGCLIGKGGSIITDMR 395
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ +R++ E+LP A +DD +V++ GD A+ + + LR L DR
Sbjct: 396 RLTKANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHVLTRLRANLFDR 448
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 171/387 (44%), Gaps = 73/387 (18%)
Query: 101 DSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 160
D+++Q+++ NE + G V+R+L P +GS+IG+ G+ I I ++TR
Sbjct: 17 DNKIQKRRVNE---------RDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTR 67
Query: 161 ARIKILDGPPGTTERAVMISAKEEPESS------------LPPAMDGLLRVHKRIVDGLD 208
A+IK++D PG +R + I + + L PA D LL+VH IV+ +
Sbjct: 68 AKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVA 127
Query: 209 SDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP---V 265
S ++ K ++LVP+SQ+ ++IGK G T+K ++ + +++ +
Sbjct: 128 S-LENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHS 186
Query: 266 FALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQ 325
A++ D V + GD+ V KA+ I + + KF P E+ + P+
Sbjct: 187 CAMEFDNFVLIAGDSEAVKKALFAISAIMYKF------TPREEIPLDTTVPE-------- 232
Query: 326 SWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD------LPPPMEKQPH----QGI 375
PP + PS P Y A +YP AD PP+ H QG
Sbjct: 233 --APPSIIIPSDVPIY-----------PAGGFYPSADSIVSARSVPPVLAATHVPELQGY 279
Query: 376 SAYGREAPVN------VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRR 429
S G PV V G ++S +I ++ P VIG G+SI +R
Sbjct: 280 SDMGSTWPVYSSNLPVVSGYGASRSEELII-----RVLCPFDKIGRVIGRGGSSIKSVRE 334
Query: 430 SSGATVTIQETRGVPGEMTVEISGTAS 456
+SGA V + +T+ E + ++ T S
Sbjct: 335 ASGAHVEVDDTKADRDECLITVTSTES 361
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + R+L P K+G +IGR G IK + E + A +++ D E + +++ E +
Sbjct: 306 ELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDL 365
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L + +I D D D+ V+ +LLVP+ G +IGK G + I+
Sbjct: 366 KSMAVEAVLLLQAKINDE-DDDT----------VAIRLLVPSKIIGCIIGKSGSIINEIR 414
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+ + VR+ +E P A +D ++EVVG+ V A+ I LR
Sbjct: 415 KRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLR 460
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 385 NVHGSSNAQSTP---SMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETR 441
N +GS ++ S+ + T T M IP + V+G GA+I+ IR+ SGA + I +++
Sbjct: 547 NAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSK 606
Query: 442 GVPGEMTVEISGTASQVQTAQQLIQNFM 469
G+ ISGT Q +TA+ LIQ F+
Sbjct: 607 SSRGDRVALISGTPEQKRTAENLIQAFI 634
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
+ K + G P S F M++PA VG ++G+ G I I + + A I+I D +R +
Sbjct: 556 SSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVAL 615
Query: 179 ISAKEE 184
IS E
Sbjct: 616 ISGTPE 621
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 173/374 (46%), Gaps = 47/374 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VF++L KVGS+IG+ G ++ + ET A I+I++ P + ER V+ISA+E E
Sbjct: 199 EVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISAQETSEQK 258
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA + ++RVH R+ ++ PS V KLLV + Q G L+GK G + ++
Sbjct: 259 HSPAQEAVIRVHCRL-----TEIGFEPSAA---VVAKLLVRSPQVGCLLGKGGLVISEMR 310
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL-- 306
A+ +R+ E + + Q++ VV+V+G V A+ I + +R+ +I P+
Sbjct: 311 RATGASIRIFSKEQIKYIS-QNEEVVQVIGSLQSVQDALFHITNRIRE-----TIFPIRT 364
Query: 307 -----FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPP----PRQAESY 357
H + P++ G PP G+ H+ +PP +Q
Sbjct: 365 PPNFSAPPHFPPFPEMPPPLFRPRNHLMSSGHPPPPQVGHPHDHSTVPPMPVDHQQHAFV 424
Query: 358 YPPADLPPPMEKQPH----QGISAYGREAPVNV-HGSSNAQSTPSMITQ----------- 401
+ PP M++ P+ +G ++ P+ V G+ + S +T
Sbjct: 425 HGMGRGPPNMDRVPYPRGYEGPNSPRSWNPLAVDRGNPGGTADTSSLTSRNETPVKNGNP 484
Query: 402 ------VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA 455
+T ++ IP Y V G ++++ IR++SGA V + +++ E V +SG
Sbjct: 485 LQNPNSLTIEITIPYMYLTHVYGENNSNLTQIRQTSGANVAVHDSKPGATEGLVIVSGAP 544
Query: 456 SQVQTAQQLIQNFM 469
Q AQ LIQ F+
Sbjct: 545 DQTHAAQCLIQGFI 558
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
++VFR++ PA K + G+ K +VE+ G ER V+I E
Sbjct: 18 DAVFRIVCPAAKTADVAAIGGDGAKILVEDL----------VGAEERVVVIVGDESA--- 64
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A L+RV +R +D +S+ VS KL+ P+ Q G ++G+ G V+ I+
Sbjct: 65 ---AQVALIRVLERTMDEETKNST---------VSCKLVAPSYQVGCVLGRGGKIVEKIR 112
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+ S +RVL + P D +++ G+ V KA+ + + L
Sbjct: 113 QDSGAHIRVLPKDQPP--PPPGDEFIQITGNFGAVKKAVLSVSACL 156
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 171/387 (44%), Gaps = 73/387 (18%)
Query: 101 DSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 160
D+++Q+++ NE + G V+R+L P +GS+IG+ G+ I I ++TR
Sbjct: 17 DNKIQKRRVNE---------RDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTR 67
Query: 161 ARIKILDGPPGTTERAVMISAKEEPESS------------LPPAMDGLLRVHKRIVDGLD 208
A+IK++D PG +R + I + + L PA D LL+VH IV+ +
Sbjct: 68 AKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVA 127
Query: 209 SDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP---V 265
S ++ K ++LVP+SQ+ ++IGK G T+K ++ + +++ +
Sbjct: 128 S-LENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHS 186
Query: 266 FALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQ 325
A++ D V + GD+ V KA+ I + + KF P E+ + P+
Sbjct: 187 CAMEFDNFVLIAGDSEAVKKALFAISAIMYKF------TPREEIPLDTTVPE-------- 232
Query: 326 SWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD------LPPPMEKQPH----QGI 375
PP + PS P Y A +YP AD PP+ H QG
Sbjct: 233 --APPSIIIPSDVPIY-----------PAGGFYPSADSIVSARSVPPVLAATHVPELQGY 279
Query: 376 SAYGREAPVN------VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRR 429
S G PV V G ++S +I ++ P VIG G+SI +R
Sbjct: 280 SDMGSTWPVYSSNLPVVSGYGASRSEELII-----RVLCPFDKIGRVIGRGGSSIKSVRE 334
Query: 430 SSGATVTIQETRGVPGEMTVEISGTAS 456
+SGA V + +T+ E + ++ T S
Sbjct: 335 ASGAHVEVDDTKADRDECLITVTSTES 361
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 157/347 (45%), Gaps = 38/347 (10%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + R+L P K+G +IGR G IK + E + A +++ D E + +++ E +
Sbjct: 306 ELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDL 365
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L + +I D D D+ V+ +LLVP+ G +IGK G + I+
Sbjct: 366 KSMAVEAVLLLQAKINDE-DDDT----------VAIRLLVPSKIIGCIIGKSGSIINEIR 414
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + VR+ +E P A +D ++EVVG+ V A L +
Sbjct: 415 KRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDA-------------------LVQ 454
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMP--PPRQAESYYPPADLPPP 366
+ +++ + + + SGG G + +P PP SY A+
Sbjct: 455 IVLRLRDDALKDRDTGHNTSAGTDSLYSGGAGLSVS-SVLPSAPPVAPLSYDQRAETGSG 513
Query: 367 MEKQPHQGISAYGREAP-VNVHGSSNAQSTP---SMITQVTQQMQIPLSYADAVIGTAGA 422
+ + YG + N +GS ++ S+ + T T M IP + V+G GA
Sbjct: 514 LGLLSSSSLYGYGSLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGA 573
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+I+ IR+ SGA + I +++ G+ ISGT Q +TA+ LIQ F+
Sbjct: 574 NIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAENLIQAFI 620
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
+ K + G P S F M++PA VG ++G+ G I I + + A I+I D +R +
Sbjct: 542 SSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVAL 601
Query: 179 ISAKEE 184
IS E
Sbjct: 602 ISGTPE 607
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 110/187 (58%), Gaps = 21/187 (11%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-SAKEEP 185
P E+++R+L PA+K+GS++GR G+ +K + EET+A+I++ D PG ER ++I + + +P
Sbjct: 40 PIETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQP 99
Query: 186 E--------------SSLPP---AMDGLLRVHKRIV-DGLDSDSSHAPSGTGGKVSTKLL 227
E ++ P A D LL++H +IV D + + +H S V+ ++L
Sbjct: 100 ELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSD--DVTARIL 157
Query: 228 VPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
V +Q G L+GK G ++ ++ + +RVL +E+LP ALQ D +V++ G S V KA+
Sbjct: 158 VQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKAL 217
Query: 288 ELIGSHL 294
I + L
Sbjct: 218 YEISTRL 224
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E R+L ++ +GS+IG+ G ++++ ++T ARIK+ + + ER +++S+ E P
Sbjct: 289 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTE 348
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P ++ L+ +H ++ S+ H+ ST+L+VP+++ G ++G+ G + +
Sbjct: 349 PISPTIEALILLHDKV--SASSEKHHS--------STRLVVPSNKVGCILGEGGQVITEM 398
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGV 283
+ + +RV D P + D +V+ G G+
Sbjct: 399 RRRTGAEIRVYSKADKPKYLSFGDELVQAAGQIHGL 434
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 53/274 (19%)
Query: 221 KVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDA 280
+ S ++L + GS+IGK G V+ +++ + ++V E+ DA
Sbjct: 289 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQ----------------EIDKDA 332
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIP----------LFEMHMQMPNPQMDHIPPPQSWGPP 330
SG R +V + IP L +H ++ H + P
Sbjct: 333 SGE-----------RLIIVSSNEIPTEPISPTIEALILLHDKVSASSEKHHSSTRLVVPS 381
Query: 331 QGLPPSGGPGYGHNPQYMPPPRQAE-SYYPPADLPPPMEKQPHQGISAYGRE---APVNV 386
+ G G G M AE Y AD P + ++G E A +
Sbjct: 382 NKVGCILGEG-GQVITEMRRRTGAEIRVYSKADKPKYL---------SFGDELVQAAGQI 431
Query: 387 HGSSNAQSTPSMITQV--TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
HG + + PS + T +++IP S ++++G G +++ IR+ SGA + + E
Sbjct: 432 HGLEDYRGLPSASGRFSSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGS 491
Query: 445 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQA 478
E VEI GT Q + AQ L++ F++ + Q+
Sbjct: 492 SESVVEIQGTLDQAKAAQSLLEGFISANSRQQQS 525
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 110/187 (58%), Gaps = 21/187 (11%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-SAKEEP 185
P E+++R+L PA+K+GS++GR G+ +K + EET+A+I++ D PG ER ++I + + +P
Sbjct: 40 PIETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQP 99
Query: 186 E--------------SSLPP---AMDGLLRVHKRIV-DGLDSDSSHAPSGTGGKVSTKLL 227
E ++ P A D LL++H +IV D + + +H S V+ ++L
Sbjct: 100 ELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDES--SDDVTARIL 157
Query: 228 VPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
V +Q G L+GK G ++ ++ + +RVL +E+LP ALQ D +V++ G S V KA+
Sbjct: 158 VQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKAL 217
Query: 288 ELIGSHL 294
I + L
Sbjct: 218 YEISTRL 224
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 82/149 (55%), Gaps = 11/149 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E R+L ++ +GS+IG+ G ++++ ++T ARIK+ + + ER +++S+ E P
Sbjct: 289 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTE 348
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P ++ L+ +H ++ S+ H+ ST+L+VP+++ G ++G+ G + +
Sbjct: 349 PISPTIEALILLHDKV--SASSEKHHS--------STRLVVPSNKVGCILGEGGQVITEM 398
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEV 276
+ + +RV D P + D +V+V
Sbjct: 399 RRRTGAEIRVYSKADKPKYLSFGDELVQV 427
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 159/344 (46%), Gaps = 47/344 (13%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VFR++V + K+G +IG++G I ++ E+T ARIKI D +R ++IS+K E E
Sbjct: 94 VFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEEETS 153
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTG--GKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A L+++ I++ S+ A GT G +LL+ SQAGSLIG G T+K I+
Sbjct: 154 AAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTIKEIR 213
Query: 249 EASNCIVRVLGAEDLPVF--ALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
S +++L P+ A + DR+V++ G+ S V KA++ IG LR+ R +I
Sbjct: 214 NDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLREH-PPREVIST 272
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
+ +P + PQ+ P + +G Y Y+ +A A P
Sbjct: 273 RPTYYAGLSPANGLMVLPQTVLPGYNM-QTGNSNY----SYLGAAGRAAGGTISAAFALP 327
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
+VT +M+IP S A VIG G +IS
Sbjct: 328 ----------------------------------KVTVEMKIPSSVAGGVIGKRGDNISQ 353
Query: 427 IRRSSGATV-TIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
IR SGA V I E G T+ GTA QV TAQ L+ N +
Sbjct: 354 IRSLSGAIVKVIGEKDGAT--RTIFFEGTAHQVATAQNLVNNHI 395
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 58/228 (25%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-------DGPP 170
+T K G ++ R+L+ + GS+IG G+ IK+I ++ A IKIL
Sbjct: 175 ATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTIKEIRNDSGATIKILPQNLSPICASA 234
Query: 171 GTTERAVMISA----------------KEEP-----------ESSLPPAMDGLLRVHKRI 203
T+R V IS +E P + L PA +GL+ + + +
Sbjct: 235 SETDRLVQISGEVSQVLKALDHIGVTLREHPPREVISTRPTYYAGLSPA-NGLMVLPQTV 293
Query: 204 VDGLD-----SDSSHAPSGTGG------------KVSTKLLVPASQAGSLIGKQGGTVKS 246
+ G + S+ S+ + KV+ ++ +P+S AG +IGK+G +
Sbjct: 294 LPGYNMQTGNSNYSYLGAAGRAAGGTISAAFALPKVTVEMKIPSSVAGGVIGKRGDNISQ 353
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
I+ S IV+V+G +D R + G A V A L+ +H+
Sbjct: 354 IRSLSGAIVKVIGEKDGAT------RTIFFEGTAHQVATAQNLVNNHI 395
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 110/187 (58%), Gaps = 21/187 (11%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-SAKEEP 185
P E+++R+L PA+K+GS++GR G+ +K + EET+A+I++ D PG ER ++I + + +P
Sbjct: 40 PIETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQP 99
Query: 186 E--------------SSLPP---AMDGLLRVHKRIV-DGLDSDSSHAPSGTGGKVSTKLL 227
E ++ P A D LL++H +IV D + + +H S V+ ++L
Sbjct: 100 ELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDES--SDDVTARIL 157
Query: 228 VPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
V +Q G L+GK G ++ ++ + +RVL +E+LP ALQ D +V++ G S V KA+
Sbjct: 158 VQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKAL 217
Query: 288 ELIGSHL 294
I + L
Sbjct: 218 YEISTRL 224
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 94/177 (53%), Gaps = 12/177 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E R+L ++ +GS+IG+ G ++++ ++T ARIK+ + + ER +++S+ E P
Sbjct: 289 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTE 348
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P ++ L+ +H ++ S+ H+ ST+L+VP+++ G ++G+ G + +
Sbjct: 349 PISPTIEALILLHDKV--SASSEKHHS--------STRLVVPSNKVGCILGEGGQVITEM 398
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRSI 303
+ + +RV D P + D +V+V G + A+ I S LR + L D S
Sbjct: 399 RRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLRTRTLRDTSC 455
>gi|414586732|tpg|DAA37303.1| TPA: hypothetical protein ZEAMMB73_623211 [Zea mays]
Length = 322
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 9/130 (6%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAM 193
ML+PAQKVG+IIG KGE ++++ EETRA ++I+ G E+AV+I +E+ + LPPAM
Sbjct: 1 MLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCEAEQAVIIFGREQLDEPLPPAM 60
Query: 194 DGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
D LLRV+++ + D LD G + ++L P+ QA SLIG+ G + SI EAS
Sbjct: 61 DALLRVYQQTINNDSLD-------VGPDNVIVRQILAPSEQAASLIGEHGVMINSIMEAS 113
Query: 252 NCIVRVLGAE 261
++RVLG E
Sbjct: 114 QTVIRVLGNE 123
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 18/186 (9%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
GE R+L P +K+GS+IG+ G I+ I EET ARIKI D ER + I++ E
Sbjct: 273 GEFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLHE 332
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSG-TGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ PA++ +L++ RI D PS G ++T+ LVP++ G L+GK+G +
Sbjct: 333 QVSPALEAVLQLQSRISD---------PSAEKDGAMTTRFLVPSANIGCLLGKKGSIIAD 383
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
++ + +RVL E LP A +DD +V+VVGD + A+ I + LR +
Sbjct: 384 MRRNTRANIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRA--------NI 435
Query: 307 FEMHMQ 312
F HM+
Sbjct: 436 FSEHMK 441
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 151/388 (38%), Gaps = 88/388 (22%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS-- 188
V+R+L P K+GS+IG+ G IK + ET A+IK+ DG PG+ ER + IS +E E
Sbjct: 47 VYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISPRERREGKPR 106
Query: 189 -------------------LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVP 229
LP + + L +V RIV+G + D S V+ +LLVP
Sbjct: 107 GGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRN---VTARLLVP 163
Query: 230 ASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMEL 289
++Q G L+GK G ++ ++ S +RVL E LP A D + + G+ + V KA+
Sbjct: 164 SNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDEL--LTGELALVKKALTT 221
Query: 290 IGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMP 349
I + L NP D P GP Q
Sbjct: 222 ISTRL------------------YDNPPRDKPPQAGHLGPFQ------------------ 245
Query: 350 PPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
ES P L PP P S APV + ++ P
Sbjct: 246 -----ESTILPGTLLPPGAFFPQGNASI----APVE--------------GEFAVRLLCP 282
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA---SQVQTAQQLIQ 466
+VIG G I IR + A + I + E + I+ QV A + +
Sbjct: 283 NEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLHEQVSPALEAVL 342
Query: 467 NFMAEAAAPSQAQMGASADQGYNPYASM 494
+ + PS + GA + P A++
Sbjct: 343 QLQSRISDPSAEKDGAMTTRFLVPSANI 370
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 18/186 (9%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
GE R+L P +K+GS+IG+ G I+ I EET ARIKI D ER + I++ E
Sbjct: 277 GEFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLHE 336
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSG-TGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ PA++ +L++ RI D PS G ++T+ LVP++ G L+GK+G +
Sbjct: 337 QVSPALEAVLQLQSRISD---------PSAEKDGAMTTRFLVPSANIGCLLGKKGSIIAD 387
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
++ + +RVL E LP A +DD +V+VVGD + A+ I + LR +
Sbjct: 388 MRRNTRANIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRA--------NI 439
Query: 307 FEMHMQ 312
F HM+
Sbjct: 440 FSEHMK 445
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 155/390 (39%), Gaps = 88/390 (22%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA--------- 181
V+R+L P K+GS+IG+ G IK + ET A+IK+ DG PG+ ER + ISA
Sbjct: 47 VYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPRERREGK 106
Query: 182 -----KE---------EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLL 227
KE E + LP + + L +V RIV+G + D S V+ +LL
Sbjct: 107 PRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRN---VTARLL 163
Query: 228 VPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
VP++Q G L+GK G ++ ++ S +RVL E LP A D +V++ G+ + V KA+
Sbjct: 164 VPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDELVQLTGELALVKKAL 223
Query: 288 ELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
I + L NP D P GP Q
Sbjct: 224 TTISTRL------------------YDNPPRDKPPQAGHLGPFQ---------------- 249
Query: 348 MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQ 407
ES P L PP P S APV + ++
Sbjct: 250 -------ESTILPGTLLPPGAFFPQGNASI----APVE--------------GEFAVRLL 284
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA---SQVQTAQQL 464
P +VIG G I IR + A + I + E + I+ QV A +
Sbjct: 285 CPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLHEQVSPALEA 344
Query: 465 IQNFMAEAAAPSQAQMGASADQGYNPYASM 494
+ + + PS + GA + P A++
Sbjct: 345 VLQLQSRISDPSAEKDGAMTTRFLVPSANI 374
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 172/407 (42%), Gaps = 84/407 (20%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E FR+L +VG +IG+ G ++ + ET A I I +R + I+A E PES
Sbjct: 318 EVTFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITIAASENPESR 377
Query: 189 LPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PA + V R ++ GLDS + G V+ +L+VP+SQ G LIGK G
Sbjct: 378 YSPAQKAAVLVFSRSIEVGFEKGLDSGLNK-----GSIVTVRLVVPSSQVGCLIGKGGVI 432
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL----- 298
V +++A+ +R++G + +P A +D+VV++ G+ S V A+ LR L
Sbjct: 433 VSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNAMGRLRDNLFVSTQ 492
Query: 299 ------------VDRS-------IIPLFEM-------------------HMQMPNPQMDH 320
VD S ++PL H+ + +DH
Sbjct: 493 NSAGTRSLSSLRVDTSPYGRQQDVVPLGSQLPPATSHSLSRHTFAQGIDHLGLSR-NLDH 551
Query: 321 IPPPQSWGPPQGLPPSGG-----------PG-YGHNPQYMPPPRQAESYYPPADLPPPME 368
P W P S G PG + N + P P PP +
Sbjct: 552 PSSPGLWTRNLDRPSSPGLWTRNLDRPSSPGLWTRNLDHRPSS-------PGLWAPPTVA 604
Query: 369 KQPHQGISAY-----GREAPVN-VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
+GI+ + R+ + V GS +A ++T ++ +P D V G G+
Sbjct: 605 GINSRGINDFSLGLTSRKGGLELVSGSKSA-----IVTNTIVEIVVPDDTIDCVYGENGS 659
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+++ +R+ SGA V + E R + + ISGT + Q AQ L+Q F+
Sbjct: 660 NLARLRQISGANVVVHEPRPGTSDRIIVISGTPDETQAAQSLLQAFI 706
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 16/187 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA------ 181
G FR+L A ++G +IG+ G IK + + T A+I+I D P +R +++ A
Sbjct: 43 GHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSG 102
Query: 182 ----KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKV-STKLLVPASQAGSL 236
+ E + A + LL+V RI+ D S G +V S +L+ A+QAGS+
Sbjct: 103 KILLRNEEVIEVSKAQEALLKVFDRILRSGGGDRS---VDVGDRVMSCRLVADAAQAGSV 159
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G V+ I++ + C +RVL +DLP+ A D ++E+ G S V KA+ + L+
Sbjct: 160 IGKGGKVVERIKKETGCKIRVL-TDDLPLCASASDEIIEIEGRVSSVKKALVAVSQRLQD 218
Query: 297 FL-VDRS 302
VDR+
Sbjct: 219 CHPVDRT 225
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 106/188 (56%), Gaps = 20/188 (10%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-SAKEEP 185
P E+++R+L P +K+GS++GR G+ +K + EET+A+I++ D PG ER ++I + + EP
Sbjct: 40 PIETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEP 99
Query: 186 E-----------------SSLPPAMDGLLRVHKRIVDG--LDSDSSHAPSGTGGKVSTKL 226
E S A D LL++H +IV D ++ S + V+ ++
Sbjct: 100 EPTDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARI 159
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LV +Q G L+GK G ++ ++ + +RVL +E+LP AL+ D +V++ G S V KA
Sbjct: 160 LVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKA 219
Query: 287 MELIGSHL 294
+ I + L
Sbjct: 220 LYEISTRL 227
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 96/176 (54%), Gaps = 12/176 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E R+L ++ +GS+IG+ G ++++ ++T ARIK+ + + ER ++IS+ E P
Sbjct: 292 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAE 351
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ PA++ L+ +H ++ S+ H+ ST+L+VP+S+ G +IG+ G + +
Sbjct: 352 PISPAIEALILLHDKV--SAPSEKHHS--------STRLVVPSSKVGCIIGEGGKVITDM 401
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRS 302
+ + +RV D P + DD +V+V G + A+ I S LR + L D S
Sbjct: 402 RRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTLRDTS 457
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 381 EAPVNVHGSSNAQSTPSMITQV--TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQ 438
EA +HG + + S + T +++IP S +++G G +++ IR+ SGA + +
Sbjct: 658 EAAGQIHGREDYREPTSATGRFLSTIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLH 717
Query: 439 ETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
E E VEI GT Q + AQ L+Q F++
Sbjct: 718 EAHAGSSESVVEIQGTLDQAKAAQSLLQGFIS 749
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 106/188 (56%), Gaps = 20/188 (10%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-SAKEEP 185
P E+++R+L P +K+GS++GR G+ +K + EET+A+I++ D PG ER ++I + + EP
Sbjct: 40 PIETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEP 99
Query: 186 E-----------------SSLPPAMDGLLRVHKRIVDG--LDSDSSHAPSGTGGKVSTKL 226
E S A D LL++H +IV D ++ S + V+ ++
Sbjct: 100 EPTDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARI 159
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LV +Q G L+GK G ++ ++ + +RVL +E+LP AL+ D +V++ G S V KA
Sbjct: 160 LVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKA 219
Query: 287 MELIGSHL 294
+ I + L
Sbjct: 220 LYEISTRL 227
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 96/176 (54%), Gaps = 12/176 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E R+L ++ +GS+IG+ G ++++ ++T ARIK+ + + ER ++IS+ E P
Sbjct: 292 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAE 351
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ PA++ L+ +H ++ S+ H+ ST+L+VP+S+ G +IG+ G + +
Sbjct: 352 PISPAIEALILLHDKV--SAPSEKHHS--------STRLVVPSSKVGCIIGEGGKVITDM 401
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRS 302
+ + +RV D P + DD +V+V G + A+ I S LR + L D S
Sbjct: 402 RRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTLRDTS 457
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 381 EAPVNVHGSSNAQSTPSMITQV-TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE 439
EA +HG + + S + T +++IP S +++G G +++ IR+ SGA + + E
Sbjct: 658 EAAGQIHGREDYREPTSATGFLSTIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHE 717
Query: 440 TRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
E VEI GT Q + AQ L+Q F++
Sbjct: 718 AHAGSSESVVEIQGTLDQAKAAQSLLQGFIS 748
>gi|413955215|gb|AFW87864.1| hypothetical protein ZEAMMB73_706163 [Zea mays]
Length = 204
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 97/160 (60%), Gaps = 17/160 (10%)
Query: 346 QYMPPPRQAESYYPPADLPPPMEKQPHQ-GISAYGRE------APVNVHGSSNAQSTPSM 398
+Y+ P ++ Y L ++ H+ G+S YGR+ P +HG+ +
Sbjct: 20 EYILPVKRDTLYLERETL---LDHNIHRSGVSLYGRDPALSTLRPPGIHGAG------PL 70
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
+TQ+TQ MQIPL+YA+ +IG GA+I+YIR +SGA VTIQE+ G P ++TVEI GT+SQV
Sbjct: 71 LTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQV 130
Query: 459 QTAQQLIQNFMAEAAAPSQAQ-MGASADQGYNPYASMYGS 497
Q AQQLIQ+ +A P ++ +GA D Y S YGS
Sbjct: 131 QAAQQLIQDSLAAHREPVRSSYVGAGLDSLYRSSYSQYGS 170
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 104/185 (56%), Gaps = 17/185 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI----SAK 182
P E+++R+L P +K+GS++GR G+ +K + + T+A+I++ D PG ER ++I S
Sbjct: 43 PIETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQT 102
Query: 183 EEPESSLPP-----------AMDGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVP 229
EE ++ A D LL++H +I + L + H S V ++LVP
Sbjct: 103 EEAAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVP 162
Query: 230 ASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMEL 289
+Q G L+GK G ++ ++ + +RVL +E+LP AL+ D +V++ G +S V KA+
Sbjct: 163 GNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYE 222
Query: 290 IGSHL 294
I + L
Sbjct: 223 ISTRL 227
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 90/168 (53%), Gaps = 11/168 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E ++L ++ +G +IG+ G ++++ ++T A +++ + G + ER +++S++E P+
Sbjct: 294 EFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDD 353
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P ++ L+ +H ++ + ++T+L+VP+++ G +IG+ G + +
Sbjct: 354 PVSPTIEALILLHSKV----------STLAENHHLTTRLVVPSNKVGCIIGEGGKVITEM 403
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+ + +RV D P + D+ +V+V G + A+ I S LR
Sbjct: 404 RRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLR 451
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 104/185 (56%), Gaps = 17/185 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI----SAK 182
P E+++R+L P +K+GS++GR G+ +K + + T+A+I++ D PG ER ++I S
Sbjct: 43 PIETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQT 102
Query: 183 EEPESSLPP-----------AMDGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVP 229
EE ++ A D LL++H +I + L + H S V ++LVP
Sbjct: 103 EEAAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVP 162
Query: 230 ASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMEL 289
+Q G L+GK G ++ ++ + +RVL +E+LP AL+ D +V++ G +S V KA+
Sbjct: 163 GNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYE 222
Query: 290 IGSHL 294
I + L
Sbjct: 223 ISTRL 227
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E ++L ++ +G +IG+ G ++++ ++T A +++ + G + ER +++S++E P+
Sbjct: 294 EFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDD 353
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P ++ L+ +H ++ +++ H ++T+L+VP+++ G +IG+ G + +
Sbjct: 354 PVSPTIEALILLHSKV--STLAENHH--------LTTRLVVPSNKVGCIIGEGGKVITEM 403
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRSIIPL 306
+ + +RV D P + D+ +V+V G + A+ I S LR + L D S
Sbjct: 404 RRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSNN 463
Query: 307 FEMHMQMPNPQMDHIPPPQS--WGPPQGLPPSGGP 339
P +D +P + +G PP GGP
Sbjct: 464 PTPFAPFDGPPVDILPNREFMLYGRSANSPPYGGP 498
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
+ +IP SY ++VIG G +++ IR+ SGA V + E E VEI G QV+ AQ L
Sbjct: 679 EFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSL 738
Query: 465 IQNFMAEAAAPSQA 478
+Q F+ ++ QA
Sbjct: 739 LQGFIGASSNSRQA 752
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 104/185 (56%), Gaps = 17/185 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI----SAK 182
P E+++R+L P +K+GS++GR G+ +K + + T+A+I++ D PG ER ++I S
Sbjct: 50 PIETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQT 109
Query: 183 EEPESSLPP-----------AMDGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVP 229
EE ++ A D LL++H +I + L + H S V ++LVP
Sbjct: 110 EEAAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVP 169
Query: 230 ASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMEL 289
+Q G L+GK G ++ ++ + +RVL +E+LP AL+ D +V++ G +S V KA+
Sbjct: 170 GNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYE 229
Query: 290 IGSHL 294
I + L
Sbjct: 230 ISTRL 234
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E ++L ++ +G +IG+ G ++++ ++T A +++ + G + ER +++S++E P+
Sbjct: 301 EFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDD 360
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P ++ L+ +H ++ +++ H ++T+L+VP+++ G +IG+ G + +
Sbjct: 361 PVSPTIEALILLHSKV--STLAENHH--------LTTRLVVPSNKVGCIIGEGGKVITEM 410
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRSIIPL 306
+ + +RV D P + D+ +V+V G + A+ I S LR + L D S
Sbjct: 411 RRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSNN 470
Query: 307 FEMHMQMPNPQMDHIPPPQS--WGPPQGLPPSGGP 339
P +D +P + +G PP GGP
Sbjct: 471 PTPFAPFDGPPVDILPNREFMLYGRSANSPPYGGP 505
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
+ +IP SY ++VIG G +++ IR+ SGA V + E E VEI G QV+ AQ L
Sbjct: 686 EFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSL 745
Query: 465 IQNFMAEAAAPSQA 478
+Q F+ ++ QA
Sbjct: 746 LQGFIGASSNSRQA 759
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 165/381 (43%), Gaps = 58/381 (15%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E FR+L P K GS+IGR GE I++I +T A++K+ + G ER + +S+ ++ +
Sbjct: 312 EITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSSDDGLAP 371
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ A L RV++ IV +S + P + +LLV SQ G LIGK G +K I+
Sbjct: 372 MLAAQVALFRVYRCIV---ESAGNEIP------LPFRLLVQTSQIGCLIGKGGSIIKQIR 422
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVV---GDASGVHKAMELIGSHLRKFLVDRSIIP 305
+ VRVL +E LP A DD ++E+ DA + + ++ LR
Sbjct: 423 NETGATVRVLPSEALPSCA-NDDELLEIGQWPADACAL--GIRIVSGRLRG--------- 470
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
N + S Q G + +P +Y P +
Sbjct: 471 ---------NIRHKAAERLTSTADAQNTQTMGFDATWQQAELIPYGMTQTAYGSPETV-- 519
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
M K G R PV + P + + QM I + +V+G G +IS
Sbjct: 520 MMSKTKSTG---GARAPPVEI--------APGVSVVNSVQMAISSQHIGSVLGRGGCNIS 568
Query: 426 YIRRSSGATVTI---------QETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAA-- 474
R+ SGA + + R V + +EISG++ QV +AQ +IQ F+A + A
Sbjct: 569 LARQVSGARIKLYPGAAGSRRTADRSVDSDRLLEISGSSEQVASAQDIIQRFIASSGAML 628
Query: 475 PSQAQMGASADQGYNPYASMY 495
P A A+ Q + P +M+
Sbjct: 629 PEFASFTATGKQ-HEPETAMF 648
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 31/197 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE-----EPE 186
+R+L P ++G +IG++G IK ET AR+K+ G ER +++++ + E
Sbjct: 60 YRLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPTTRGADERVILVASGDDLTVGEDG 119
Query: 187 SSLPPAMDGLLRVHKRIV--DGLDS--------DSSHAPSGTGGKVS--TKLLVPASQAG 234
+ A L R+ I +G+ + + + T G + +LLVP Q G
Sbjct: 120 EGMTTAEVALFRIFDTITGEEGVTAARGGEGEGEGEASGGSTRGASTPICRLLVPRVQVG 179
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVG---DASG--------- 282
SLIGK G + +I+ +S VRV+ A LP A Q D ++++ DA G
Sbjct: 180 SLIGKGGTVISAIRASSGATVRVMPANMLPACASQGDELLQITAPSRDADGAERDQKLSM 239
Query: 283 --VHKAMELIGSHLRKF 297
V A+ +I HLR++
Sbjct: 240 ASVKNALRMIAKHLREY 256
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 106/192 (55%), Gaps = 28/192 (14%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI------- 179
P ++V+R+L P++K+G +IG+ G +K + EET+A+I + D PG+ ER ++I
Sbjct: 44 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 103
Query: 180 ---------SAKEEPESSLPP---AMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKV 222
SA E + S+ P A D LL+VH RI++ G+ SD + S +
Sbjct: 104 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS----TI 159
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
+ +LLVP + G L+GK+G ++ ++ + +RVL A+ LP A+ D +V++ G +
Sbjct: 160 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 219
Query: 283 VHKAMELIGSHL 294
+A+ + + L
Sbjct: 220 AKRALYEVSTLL 231
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 114 LAVGSTEKKWPGWPGE----SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP 169
+ GS PG GE ++L A K+G +IG+ G +K++ +ET A I + D P
Sbjct: 297 MGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 356
Query: 170 PGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVP 229
+ ER + SA E + +D +L++ + + + G ++T+LLVP
Sbjct: 357 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK----------GTITTRLLVP 406
Query: 230 ASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQD 270
+S+ G ++G+ G + ++ + +RV+GA LQD
Sbjct: 407 SSKVGCILGQGGHVINEMRRRTQADIRVVGAR----VKLQD 443
>gi|294460497|gb|ADE75825.1| unknown [Picea sitchensis]
Length = 113
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 4/87 (4%)
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
MQIPLSYAD VIG G +I Y+RR+SGAT+TIQETRGVP E+TVEI GT +QVQTAQ LI
Sbjct: 1 MQIPLSYADDVIGVEGTNIGYMRRASGATITIQETRGVPSEITVEIKGTNTQVQTAQHLI 60
Query: 466 QNFMAEAAAPSQAQMGASADQGYNPYA 492
QNFMA ++ + D GY YA
Sbjct: 61 QNFMAGG----HKKITHNVDAGYGSYA 83
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 104/178 (58%), Gaps = 12/178 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK------ 182
++V+R L P +K+GSIIGR GE +K++ +T+A+I+I + PG ER V + +
Sbjct: 48 DTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESND 107
Query: 183 -EEPESSLPPAMDGLLRVHKRIV----DGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
E+ + PAMD L+R+H++++ G+ D D G V+ KLLV + Q G +
Sbjct: 108 FEDSGEFMCPAMDALVRIHQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIGCV 167
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
IGK G V++I+ + +R+L + LP+ AL D +V++ G+ + V KA+ + + L
Sbjct: 168 IGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARL 225
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 153 KKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSS 212
+I +++ A IK+ + + ISA+E E ++ + + R + ++ DS
Sbjct: 319 NQIRQDSGANIKVDSSATEGDDCLIAISARELFEDPFSATIEAAVLLQPRCSEKVERDSG 378
Query: 213 HAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDR 272
+++LLV +S+ G LIGK G + ++ + +R+L EDLP A +DD
Sbjct: 379 ILS------FTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDDE 432
Query: 273 VVEVVGDASGVHKAMELIGSHLRKFLVD--RSIIPLF 307
+V++ G+ A+ + + LR L D RS+ L
Sbjct: 433 MVQISGELDIAKDALLQVLTRLRANLFDKERSVSSLL 469
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 102/170 (60%), Gaps = 5/170 (2%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR++VP++++G +IG++G I+KI EET+A IKI D ER ++IS+K+ E+ +
Sbjct: 61 LFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS-ENVIS 119
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST--KLLVPASQAGSLIGKQGGTVKSIQ 248
A + LL+V I+ DS++ G G V+ +LL+ SQAG LIG G ++ ++
Sbjct: 120 DAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLR 179
Query: 249 EASNCIVRVLGAEDLPVFAL--QDDRVVEVVGDASGVHKAMELIGSHLRK 296
+S + +L LP+ A DR+V++ GD V KA+E IG LR+
Sbjct: 180 NSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRE 229
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 385 NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
N + +S P+ VT M IP + +IG G++IS IR SGA + + +G
Sbjct: 245 NTNRTSQQYLDPASADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQ 304
Query: 445 GEMTVEISGTASQVQTAQQLIQNFM 469
++ G+A QV A+Q + ++
Sbjct: 305 NHRQIQFGGSAQQVALAKQRVDEYI 329
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 102/170 (60%), Gaps = 5/170 (2%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR++VP++++G +IG++G I+KI EET+A IKI D ER ++IS+K+ E+ +
Sbjct: 61 LFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS-ENVIS 119
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST--KLLVPASQAGSLIGKQGGTVKSIQ 248
A + LL+V I+ DS++ G G V+ +LL+ SQAG LIG G ++ ++
Sbjct: 120 DAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLR 179
Query: 249 EASNCIVRVLGAEDLPVFAL--QDDRVVEVVGDASGVHKAMELIGSHLRK 296
+S + +L LP+ A DR+V++ GD V KA+E IG LR+
Sbjct: 180 NSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRE 229
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 385 NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
N + +S P+ VT M IP + +IG G++IS IR SGA + + +G
Sbjct: 245 NTNRTSQQYLDPASADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQ 304
Query: 445 GEMTVEISGTASQVQTAQQLIQNFM 469
++ G+A QV A+Q + ++
Sbjct: 305 NHRQIQFGGSAQQVALAKQRVDEYI 329
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 117 GSTEKKWPG------WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
G +++ PG P ++V+R L ++K+GSIIGR GE K++ +T+A+I+I + P
Sbjct: 21 GGGKRRNPGDDTYAPCPDDTVYRYLCASRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVP 80
Query: 171 GTTERAVMISAK-------EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS 223
G ER + I + E+ E + PA D L RVH++++ G +V
Sbjct: 81 GCDERVITIFSSSRETNTVEDTEDKVCPAQDALFRVHEKLITDDGPGDEENEEGLA-QVI 139
Query: 224 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGV 283
+LLVP+ Q G +IGK G ++ I+ + +RVL E LP A+ D ++++ GD V
Sbjct: 140 VRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEHLPACAISGDELLQISGDPLVV 199
Query: 284 HKAMELIGSHL 294
KA+ + S L
Sbjct: 200 RKALLQVSSRL 210
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 7/173 (4%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R+L A VG +IG+ G IK+I +E+ A IK+ D + + +SAKE E
Sbjct: 279 EFSLRLLCAASDVGGVIGKGGGIIKQIRQESGAFIKV-DSSSAEDDCIITVSAKEFFEDP 337
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ P +D +R+ R + D +S PS T T+LLV S+ G LIGK G + I+
Sbjct: 338 ISPTIDATVRLQPRCSEKTDPESGE-PSYT-----TRLLVSTSRIGCLIGKGGSIITEIR 391
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
S +R+L E++P A +D+ +V++ GD A+ I + L+ +R
Sbjct: 392 RTSRANIRILSKENVPKVASEDEEMVQISGDLDVAKHALVQITTRLKANFFER 444
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 157/351 (44%), Gaps = 71/351 (20%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI------- 179
P E+++R+L P +K+GS++GR G+ +K + EET+A+I++ D PG ER ++I
Sbjct: 40 PIETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEP 99
Query: 180 ----SAKEEPES-------SLPPAMDGLLRVHKRIVDG--LDSDSSHAPSGTGGKVSTKL 226
A EE S S A D LL++H +IV D ++ S + V+ ++
Sbjct: 100 EPTDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARI 159
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LV +Q G L+GK G ++ ++ + +RVL +E+LP AL+ D +V++ G S V KA
Sbjct: 160 LVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKA 219
Query: 287 MELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ 346
+ I + L + H + N ++ I + + P H +
Sbjct: 220 LYEISTRLHQ-------------HPRKENRPLEEIIDASTQRKRE------SPTLQH--E 258
Query: 347 YMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
Y P + PP L P P ++ T++
Sbjct: 259 YSMLPHLHSDHTPPIPLLDPYRSGPQYPVTE-------------------------TEEF 293
Query: 407 QIPLSYAD----AVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEIS 452
I + A +VIG +GA++ + + +GA + +QE + GE + IS
Sbjct: 294 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIIS 344
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E R+L ++ +GS+IG+ G ++++ ++T ARIK+ + + ER ++IS+ E P
Sbjct: 292 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAE 351
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ PA++ L+ +H ++ S+ H+ ST+L+VP+S+ G +IG+ G + +
Sbjct: 352 PISPAIEALILLHDKV--SAPSEKHHS--------STRLVVPSSKVGCIIGEGGKVITDM 401
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
+ + +RV D P + DD +V+ G G
Sbjct: 402 RRRTGAEIRVYSKADKPKYLSFDDELVQAAGQIHG 436
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 38/276 (13%)
Query: 221 KVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDA 280
+ S ++L + GS+IGK G V+ +++ + ++V E+ DA
Sbjct: 292 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQ----------------EIDKDA 335
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
SG + + + + + + +I L +H ++ P H + P + G G
Sbjct: 336 SG-ERLIIISSNEIPAEPISPAIEALILLHDKVSAPSEKHHSSTRLVVPSSKVGCIIGEG 394
Query: 341 YGHNPQYMPPPRQAE-SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI 399
G M AE Y AD P + + + A G+ +HG + + S
Sbjct: 395 -GKVITDMRRRTGAEIRVYSKADKPKYLSFDD-ELVQAAGQ-----IHGREDYREPTSAT 447
Query: 400 TQV--TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQ 457
+ T +++IP S +++G G +++ IR+ SGA + + E E VEI GT Q
Sbjct: 448 GRFLSTIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQ 507
Query: 458 VQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYAS 493
+ AQ L+Q F++ A++ Q PY+S
Sbjct: 508 AKAAQSLLQGFIS-----------ANSRQQQQPYSS 532
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 35/206 (16%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P S R++VP+ KVG IIG G+ I + T A I++ ++ +S +
Sbjct: 370 PSEKHHSSTRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVY----SKADKPKYLSFDD 425
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST-KLLVPASQAGSLIGKQGG 242
E + ++H R D S TG +ST +L +P S GS++G G
Sbjct: 426 E-------LVQAAGQIHGR------EDYREPTSATGRFLSTIELRIPNSSLGSIVGAGGV 472
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRS 302
+ I++ S +R+ A A + VVE+ G A L L+ F+ S
Sbjct: 473 NLAEIRQVSGARLRLHEAH-----AGSSESVVEIQGTLDQAKAAQSL----LQGFISANS 523
Query: 303 IIPLFEMHMQMPNPQMDHIPPPQSWG 328
Q P +P SWG
Sbjct: 524 --------RQQQQPYSSRMPLYPSWG 541
>gi|297824455|ref|XP_002880110.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325949|gb|EFH56369.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 163
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 73/108 (67%), Gaps = 17/108 (15%)
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
MEKQPHQ ISAYGRE P+NVH SS P M+ Q IPL + D VIGT+G++ SY
Sbjct: 1 MEKQPHQDISAYGREPPMNVHVSS----APPMVAQ------IPLPHTDTVIGTSGSNKSY 50
Query: 427 IRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAA 474
R SGATVT QETRG+P EMTVE+S T SQVQTA MAEA A
Sbjct: 51 TRLLSGATVTSQETRGLPCEMTVEVSRTGSQVQTA-------MAEAGA 91
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 169/368 (45%), Gaps = 38/368 (10%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P FR+L +KVG +IG+ G IK + +ET IK+L+G + +R ++IS P+
Sbjct: 318 PDMLTFRLLCLDEKVGGVIGKGGAIIKTLQQETGCEIKVLEGVSDSEDRIILISGPAHPD 377
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ A D +LRV RI L P G V +LLV ++Q G L+GK G +
Sbjct: 378 DRISAAQDAVLRVQTRIARALP-----LPEGKEKAVIGRLLVSSNQIGCLLGKGGAIMAE 432
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
+++++ +R+LG + +P A +++ VV++ G+ V +A+ I + LR R + P
Sbjct: 433 MRKSTGAYIRILGKDQIPKCASENEEVVQINGEHEVVQEALLQITTRLRNHFF-RDVFPS 491
Query: 307 FEMHMQMPNPQ-MDHIPP-PQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD-- 362
+ NP +D PP P G + PP H+ M P ++P D
Sbjct: 492 ID---HPSNPAFLDQAPPFPPYMGRRELSPPFHA---FHSFDGMGGPPPPVGFHPHDDHS 545
Query: 363 ----------LPPPMEKQPH-----------QGISAYGREAPVNVHGSSNAQSTPSMITQ 401
+PP E++P G+ +G + G P++IT
Sbjct: 546 PFMHNIHRPGMPPHFERKPWGPQGLMEAGGPMGLPEFGGHPQRRISGFGGVNH-PAIITS 604
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
T ++ +P S + G GA + IR+ S A +T+ E + E + ISGT Q A
Sbjct: 605 TTVEVVVPRSVVPVIYGEDGACLKQIRQISDAKITVTEPKPGAAETVIIISGTPEQTHAA 664
Query: 462 QQLIQNFM 469
Q LIQ F+
Sbjct: 665 QSLIQAFV 672
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
+ +LLV +SQ G L+GK G +K + S +R+L + LP+ A D +V++ G+
Sbjct: 180 TLRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPICASPTDELVQIAGEVDA 239
Query: 283 VHKAMELIGSHL 294
+ KA++ + L
Sbjct: 240 IRKALQSVAQQL 251
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 21/212 (9%)
Query: 117 GSTEKKWPG------WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
G +++ PG P ++V+R L ++K+GSIIGR GE K++ +T+A+I+I + P
Sbjct: 21 GGGKRRNPGDDTYAPGPDDTVYRYLCTSRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVP 80
Query: 171 GTTERAVMISAK-------EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS 223
G ER + I + E+ E + PA D L RVH++++ G +V+
Sbjct: 81 GCDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEKLIADDGPGDEENEEGLA-QVT 139
Query: 224 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGV 283
+LLVP+ Q G +IGK G ++ I+ + +RVL E LP + D ++++ GD V
Sbjct: 140 VRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERLPACGISGDELLQISGDPLVV 199
Query: 284 HKAMELIGSHLRKFLVDRSIIPLFEMHMQMPN 315
KA+ + S L P H+Q P+
Sbjct: 200 RKALLQVSSRLHDN-------PSRSQHLQAPS 224
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 7/170 (4%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L A VG +IG+ G IK+I +E+ A IK+ D + + +SAKE E + P
Sbjct: 282 LRLLCAASDVGGVIGKGGGIIKQIRQESGAFIKV-DSSSAEDDCIITVSAKEFFEDPVSP 340
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+D +R+ + + D +S PS T T+LLV SQ G LIGK G + I+ S
Sbjct: 341 TIDATVRLQPKCSEKTDPESGE-PSYT-----TRLLVSTSQIGCLIGKGGSIITEIRRTS 394
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+R+L E++P A +D+ +V++ GD A+ I + L+ +R
Sbjct: 395 RANIRILSKENVPKVASEDEEMVQISGDLEVARHALVQITTRLKANFFER 444
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 7/182 (3%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
S K+ G + +FR++VP++++G +IG++G I+KI E TRA IKI D ER +
Sbjct: 90 SAAKRAKGQ--DVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVI 147
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
+IS+K+ E + A L ++ I+ D D+S +G + +LL+ SQAG
Sbjct: 148 IISSKDNDE-MVTDAEKALEQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGG 206
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFAL--QDDRVVEVVGDASGVHKAMELIGSH 293
LIG G ++ ++ +S ++ VL LP+ A + DRVV++ GD S V KA+E IG
Sbjct: 207 LIGMSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQ 266
Query: 294 LR 295
LR
Sbjct: 267 LR 268
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 98/175 (56%), Gaps = 8/175 (4%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK---- 182
P ++V+R L ++K+GSIIGR GE K++ +T+A+I+I + P ER + I +
Sbjct: 37 PDDTVYRYLCTSRKIGSIIGRGGEIAKQLRSDTQAKIRIGESVPACDERVITIFSSSRET 96
Query: 183 ---EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
E+ E + PA D L RVH+++ D + + G+V+ +LLVP+ Q G +IGK
Sbjct: 97 NTIEDTEDKVCPAQDALFRVHEKLATD-DGPVNKENEESLGQVTVRLLVPSDQIGCIIGK 155
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G ++ I+ + +RVL E LP+ A D ++ + GD V KA+ + S L
Sbjct: 156 GGHIIQGIRSDTGSQIRVLSNEHLPLCATSGDELLLITGDPMVVRKALLQVSSRL 210
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P E R+L A VG +IG+ G IK+I +E+ A IK+ D + + +SAKE E
Sbjct: 277 PKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGAFIKV-DSSSAEDDCIITVSAKEFFE 335
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ P +D +R+ R + +D++S PS T T+LLV S+ G LIGK G +
Sbjct: 336 DPVSPTIDATVRLQPRCSEKIDAESGE-PSYT-----TRLLVSTSRIGCLIGKGGSIITE 389
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
I+ S +R++ +D+P A D+ +V + GD A+ I + L+ +R
Sbjct: 390 IRRTSRANIRIISKQDVPKVASDDEEMVLISGDLDFARHALLQITTRLKANFFER 444
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 164/358 (45%), Gaps = 49/358 (13%)
Query: 103 QLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR 162
+ +EK +N+ +L V V+R+L P+ +GS+IG+ G+ I I +ETRAR
Sbjct: 30 ETEEKTDNKDDLVV--------------VYRILCPSGVMGSVIGKSGKVINLIRQETRAR 75
Query: 163 IKILDGPPGTTERAVMISAK------------EEPESSLP--PAMDGLLRVHKRIVDGLD 208
IK++D PG +ER + I E S+P A D LL+VH IV L
Sbjct: 76 IKVVDPFPGCSERVITIFCSVTEKKDIIDIEHSELNYSIPLCSAQDALLKVHDAIVASLA 135
Query: 209 SDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP---- 264
+ + + +LLVP+SQ ++IGK G +K I+ + V+V+ ++D+
Sbjct: 136 TAAENTKIDRDDIRECRLLVPSSQCSNVIGKSGSIIKKIRSRTRANVKVV-SKDVSDPSH 194
Query: 265 VFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPP 324
A+ D +V + G++ V KA+ + + + K + R IPL ++P + IP
Sbjct: 195 TCAMDFDNIVLISGESESVKKALFAVSAIMYK-VSPREQIPLDTTVQEVPASII--IPSD 251
Query: 325 QSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPV 384
S P GL P+ P + H S+ LP + + + A
Sbjct: 252 LSIYPQGGLYPNQDPIFQHGA-------NVSSFI--GTLPQGYGESAANPMPVFSASALP 302
Query: 385 NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRG 442
VHG + + ++ +V S VIG G++I IR++SG+ + + ++R
Sbjct: 303 VVHGFGGSSKSEKLVIKVICSS----SKIGRVIGKGGSTIKGIRQASGSHIEVNDSRA 356
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 155/379 (40%), Gaps = 78/379 (20%)
Query: 125 GWPGES-----VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM- 178
G+ G S V +++ + K+G +IG+ G IK I + + + I++ D + V+
Sbjct: 306 GFGGSSKSEKLVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVIT 365
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
++A E P+ A++ +L + ++I D + KV +LLVP+ G +IG
Sbjct: 366 VTATESPDDLKSMAVEAVLLLQEKINDEDEE-----------KVKMQLLVPSKVIGCIIG 414
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KF 297
K G + I++ + + + + P A +D +VE+ G+ S V A+ I LR
Sbjct: 415 KSGSIISEIRKRTKANIHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDV 474
Query: 298 LVDRSI------------IPLF-----EMHMQMPNPQMDHIP---------PPQSWGPPQ 331
L DR I F + +P+ M +P P++
Sbjct: 475 LRDREIGSRNQPPARSENNNFFSSGSSNTGLALPSSFMSSVPQVASVDFDRRPETGSSMS 534
Query: 332 GLPPSGGP-GYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSS 390
LP SGG GYG P N++G
Sbjct: 535 MLPSSGGLYGYGSFP-------------------------VGNNSYGSKSSYSSNLYGGL 569
Query: 391 NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVE 450
QST T +++IP + V+G G ++ IRR SGA + I +++ G
Sbjct: 570 -PQST-------TMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRIAL 621
Query: 451 ISGTASQVQTAQQLIQNFM 469
ISGT Q +TA+ L Q F+
Sbjct: 622 ISGTPEQKRTAENLFQAFI 640
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 41/350 (11%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + RML P+ K+G +IG+ G IK++ + + ARI++ D E + I+A E
Sbjct: 311 ELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITATESTSDL 370
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L + ++I +D AP VS +LLVP+ G +IG+ G + I+
Sbjct: 371 KSVAVEAVLLLQEKI-----NDEDDAP------VSIRLLVPSKVIGCIIGRSGAIINEIR 419
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII---- 304
+ + +++ + P +A +D +VEVVG+ V A+ I LR+ ++ I
Sbjct: 420 KRTKADIQI-SRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNKDIDHNR 478
Query: 305 -----PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYP 359
L+ + P M P + P G G G +SY
Sbjct: 479 HIGSESLYASSSVLSAPPMLSSIP--ATAPALAYDQRTGSGTGLGMHSSRSHYGYDSY-- 534
Query: 360 PADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGT 419
ME + +S+Y ++N + T +M +P + V+G
Sbjct: 535 ------SMEDNGYGSMSSY----------ATNLYEGHRLPPLSTLEMVVPANAVGKVMGK 578
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
GA+++ IR+ SGATV I E++ G+ ISGT+ + + A+ LIQ F+
Sbjct: 579 GGANLANIRKISGATVEISESKSYRGDRVALISGTSEEKRAAENLIQAFI 628
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 48/348 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA---------- 181
+R+L P + +GS+IG+ G+ I I +E+RA++K++D PG R + I
Sbjct: 44 YRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNKEEIEI 103
Query: 182 --KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
+ + E L A D L++VH I + +++ + + K ++LVP+SQ+ LIGK
Sbjct: 104 EDEFDNEKPLCAAQDALIKVHSAISNSIET-AGDSEKKRKNKDECQILVPSSQSAILIGK 162
Query: 240 QGGTVKSIQEASNCIVRVL---GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
G T+K ++ + ++V+ A+ A++ D V +VG++ V +A+ + + + K
Sbjct: 163 AGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFV-LVGESEAVKRALFAVSTIMYK 221
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDH---IPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQ 353
F P ++ + P+ H IP PP GL P+ P + PR
Sbjct: 222 FS------PKEDIPLDTTVPETPHSIIIPSELPIYPPGGLYPASDP--------IVQPRS 267
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGR-----EAPVNVHGSSNAQSTPSMITQVTQQMQI 408
P + + H G + G +P+ V S A + +I +M
Sbjct: 268 F-----PQLIGATTMQDLHGGYADTGNTWPLYSSPLPVVSSLGASQSEELIV----RMLC 318
Query: 409 PLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
P +IG G +I +R++SGA + + +++ E + I+ T S
Sbjct: 319 PSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITATES 366
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 100/178 (56%), Gaps = 14/178 (7%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK---- 182
P ++V+R L ++K+GSIIGR GE K++ ET+A+I+I + PG ER + I +
Sbjct: 35 PDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRT 94
Query: 183 ---EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGT---GGKVSTKLLVPASQAGSL 236
++ E + PA D L RVH+R L +D S + +V+ +LLVP+ Q G +
Sbjct: 95 NTIDDAEDKVCPAQDALFRVHER----LATDESFGNEDSEEISPQVTVRLLVPSDQIGCI 150
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+GK G ++ I+ + +RVL + +P A+ D ++++ GD V KA+ + S L
Sbjct: 151 LGKGGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRL 208
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM-ISAKEEPES 187
E R+L A VG +IG+ G IK+I +E+ A IK+ + ++ +SAKE E
Sbjct: 277 EFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFED 336
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P +D +R+ R + DS+ + +T+LLV S+ G LIGK G + I
Sbjct: 337 PVSPTIDAAVRLQLRCSEKSDSELAEQ------SYTTRLLVSTSRIGCLIGKGGSIITEI 390
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ S +R+L E++P A +D+ +V++ G A+ I + L+ +R
Sbjct: 391 RRTSRANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANFFER 444
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 109/188 (57%), Gaps = 20/188 (10%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-SAKEEP 185
P E+++R+L P +K+GS++GR G+ +K + EET+A+I++ D PG ER ++I + + +P
Sbjct: 40 PVETIYRILCPVKKIGSVLGRGGDVVKALREETKAKIRVADPIPGADERVIIIFNYQNQP 99
Query: 186 E--------------SSLPP---AMDGLLRVHKRIV-DGLDSDSSH-APSGTGGKVSTKL 226
E ++ P A D LL++H +IV D + +H S + V+ ++
Sbjct: 100 ELTDEAAETKFSDGLGNMKPHCFAQDALLKIHDKIVADEIHDGVAHEEKSESADDVTARI 159
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LV +Q G L+GK G ++ ++ + +RVL +EDLP AL+ D +V++ G S V KA
Sbjct: 160 LVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLPQCALKSDELVQISGAPSLVRKA 219
Query: 287 MELIGSHL 294
+ I + L
Sbjct: 220 LYEISTRL 227
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E R+L ++ +GS+IG+ G +K++ ++T ARIK+ + + E +++S+KE P
Sbjct: 293 EFSIRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSSKEVPSE 352
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ PA++ L+ +H ++ S+ H+ ST+L+VP+S+ G ++G+ G + +
Sbjct: 353 PISPAIEALILLHDKV--SAPSEKRHS--------STRLVVPSSKVGCILGEGGKVITEM 402
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
+ + +RV D P + DD +V+ G G
Sbjct: 403 RRRTGAEIRVYSKADKPKYLSFDDELVQTAGQIHG 437
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 38/265 (14%)
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
S ++L + GS+IGK G VK +++ + ++V E+ DASG
Sbjct: 295 SIRILCASELIGSVIGKSGANVKRVEQQTGARIKVQ----------------EIDKDASG 338
Query: 283 VHKAMELIGSHLRKFLVDRSIIPLFE----MHMQMPNPQMDHIPPPQSWGPPQGLPPSGG 338
+++ ++ S K + I P E +H ++ P + P + G
Sbjct: 339 --ESLIIVSS---KEVPSEPISPAIEALILLHDKVSAPSEKRHSSTRLVVPSSKVGCILG 393
Query: 339 PGYGHNPQYMPPPRQAE-SYYPPADLPPPMEKQPHQGISA---YGREAPVNVHGSSNAQS 394
G G M AE Y AD P + +A +GRE + G ++A
Sbjct: 394 EG-GKVITEMRRRTGAEIRVYSKADKPKYLSFDDELVQTAGQIHGRE---DYRGLTSATG 449
Query: 395 TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
S I +++IP S ++++G G +++ IR+ SGA + + E E VEI GT
Sbjct: 450 FLSTI-----ELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQGT 504
Query: 455 ASQVQTAQQLIQNFMAEAAAPSQAQ 479
+ + AQ L+Q F++ + Q Q
Sbjct: 505 LEEAKAAQSLLQGFISANSRSIQQQ 529
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 100/178 (56%), Gaps = 14/178 (7%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK---- 182
P ++V+R L ++K+GSIIGR GE K++ ET+A+I+I + PG ER + I +
Sbjct: 35 PDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRT 94
Query: 183 ---EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGT---GGKVSTKLLVPASQAGSL 236
++ E + PA D L RVH+R L +D S + +V+ +LLVP+ Q G +
Sbjct: 95 NTIDDAEDKVCPAQDALFRVHER----LATDESFGNEDSEEISPQVTVRLLVPSDQIGCI 150
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+GK G ++ I+ + +RVL + +P A+ D ++++ GD V KA+ + S L
Sbjct: 151 LGKGGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRL 208
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM-ISAKEEPES 187
E R+L A VG +IG+ G IK+I +E+ A IK+ + ++ +SAKE E
Sbjct: 277 EFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFED 336
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ P +D +R+ R + DS+ + +T+LLV S+ G LIGK G + I
Sbjct: 337 PVSPTIDAAVRLQLRCSEKSDSELAEQ------SYTTRLLVSTSRIGCLIGKGGSIITEI 390
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ S +R+L E++P A +D+ +V++ G A+ I + L+ +R
Sbjct: 391 RRTSRANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANFFER 444
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 46/355 (12%)
Query: 125 GWPGES-VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
G+ GE VFR+L P +KV IIG ++ + E +K+ D G+ E+ ++I+++E
Sbjct: 321 GFYGEELVFRILCPVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSEE 380
Query: 184 EPESSLPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGG 242
P+ L PA + LL + RIVD LD D++ ++T+L+VP+S+ L GK
Sbjct: 381 GPDDELFPAQEALLHIQTRIVDLVLDKDNT---------ITTRLVVPSSEIECLDGKD-V 430
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRS 302
++ I+ + +++L +DLP+ + D +V++VG+ A+ + S LR +L
Sbjct: 431 SLSEIRRLTGANIQILPRDDLPLCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYR-- 488
Query: 303 IIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY----Y 358
F Q D IP P P G + +P + +Y
Sbjct: 489 --DFF---------QRDPIPLP---------APLPGAEASSSNNIVPVAETSTTYQNVQT 528
Query: 359 PPADLPPPMEKQPHQGISAYGREAPV----NVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
A LPP K+ + G++ +V N + P ++T+ T ++ IP
Sbjct: 529 VAAALPP---KETGGSSTEVGKQKESGRRDDVLSGLNRIAVP-LVTRSTLEVVIPEYAVP 584
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+I + + ++ I SGA VT+ E R + ++ISGT Q + AQ L+Q F+
Sbjct: 585 KLIAKSKSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFI 639
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 95/184 (51%), Gaps = 22/184 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPESSL 189
+R+L K G +IG+ G IK I + T A I + + PG ER + IS + +PE +
Sbjct: 63 YRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRRRDPEGRM 122
Query: 190 P---PAMDGLLRVHKRIVDGLDSDSSHAPS-------------GTGGKVSTKLLVPASQA 233
P PA + LL +H+RI L+SD++ + +V+T+L+V
Sbjct: 123 PSFSPAQEALLLIHERI---LESDAAFGVAEDDEEYGAGRGGGAGRDRVATRLVVSRMHV 179
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
G L+GK G ++ ++ + +R+L + +LP + +V+VVGD + V A+ +I S
Sbjct: 180 GCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNALVIISS 239
Query: 293 HLRK 296
LR+
Sbjct: 240 RLRE 243
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 142/324 (43%), Gaps = 69/324 (21%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-SAKEEP 185
P ++VFR L P K+GSIIG G+ K++ ET ++I+I + PG ER V I S EE
Sbjct: 40 PEDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEET 99
Query: 186 ESS------LPPAMDGLLRVHKRIVD---GLDSD-SSHAPSGTGGKVSTKLLVPASQAGS 235
S + PA D L RVH R++ +D D H +++ ++LVP+ Q G
Sbjct: 100 NVSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQ------QITVRMLVPSDQIGC 153
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+IGK G +++++ + +RVL +E LP AL D ++++ G+ + V KA+ + + L
Sbjct: 154 VIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVKKALYQVAARLH 213
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
P H + +P + G G+
Sbjct: 214 DN-------PSRSQHQLLSSPSIFR----------------SGAGF-------------- 236
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGS--SNAQSTPSMITQVTQQMQIPLSYA 413
PH G G + + + S S+ +S S + + ++ P
Sbjct: 237 -------------VNPHAGTQVMGVTSLMGPYASYKSDGRSKSSSVKEFAVRLVCPTENV 283
Query: 414 DAVIGTAGASISYIRRSSGATVTI 437
AVIG G I +R+ SGA++ +
Sbjct: 284 GAVIGKGGGIIKQLRQESGASIKV 307
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 17/201 (8%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P + VG++IG+ G IK++ +E+ A IK+ + + +SAKE E
Sbjct: 271 EFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQ 330
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P +D +R+ R + + +S A ++T+LLVP+S+ G LIGK G + ++
Sbjct: 331 -SPTIDATMRLQPRSSEKTEKESGDAI------LTTRLLVPSSRVGCLIGKGGSIINEMR 383
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
++ +RVL E+LP A +DD +V++ GDA+ A+ + LR FE
Sbjct: 384 NSTRASIRVLSKENLPKVASEDDEMVQITGDANVATNALLQVLMRLRA--------NTFE 435
Query: 309 MHMQMP--NPQMDHIPPPQSW 327
M P +P + ++P S
Sbjct: 436 MEGSFPAFSPGLSYVPMSASM 456
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 7/183 (3%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
S K+ G + +FR++VP++++G +IG++G I+KI E+T+A IKI D ER +
Sbjct: 92 SAAKRAKGQ--DVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVI 149
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDS--DSSHAPSGTGGKVSTKLLVPASQAGS 235
+IS+K+ E + A L ++ I+ DS D+S +G + +LL+ SQAG
Sbjct: 150 IISSKDNDE-KVTDAEKALEQIAHLILKEDDSSLDASKVTAGHVAANTIRLLIAGSQAGG 208
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFAL--QDDRVVEVVGDASGVHKAMELIGSH 293
LIG G ++ ++++S + VL LP+ A + DRVV++ GD V KA+E IG
Sbjct: 209 LIGMSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQ 268
Query: 294 LRK 296
LR+
Sbjct: 269 LRE 271
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 396 PSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA 455
P+ + VT +M I + +IG G++IS IR SGA + + +G ++ G+A
Sbjct: 298 PTSVDYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSA 357
Query: 456 SQVQTAQQLIQNFM 469
QV A+Q + ++
Sbjct: 358 QQVALAKQRVDEYI 371
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR++VP++++G +IG++G I+KI EET+A IKI D ER ++IS+K + E+ +
Sbjct: 61 LFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSK-DSENVIS 119
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST--KLLVPASQAGSLIGKQGGTVKSIQ 248
A + LL+ I+ DS++ G G V+ +LL+ SQAG LIG G ++ ++
Sbjct: 120 DAENALLQXASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLR 179
Query: 249 EASNCIVRVLGAEDLPVFAL--QDDRVVEVVGDASGVHKAMELIGSHLR 295
+S + +L LP+ A DR+V++ GD V KA+E IG LR
Sbjct: 180 NSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLR 228
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 155/341 (45%), Gaps = 14/341 (4%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF++L ++G +IG+ G ++ + E+ A + + G ER + I+A E ES
Sbjct: 310 VFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYS 369
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA ++ V R VD + + S G V +L+VP++Q G ++GK G + I++
Sbjct: 370 PAQKAVVLVFSRSVD-VAIEKWQESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKV 428
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ +R++ ++ +P A + D +V++ G+ S V A+ + LR L ++P +
Sbjct: 429 TGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLF---LVPYGRVR 485
Query: 311 MQMPNPQMDHIPPPQ-SWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEK 369
P + + S+ S G H+ P +PP L +
Sbjct: 486 DTAPLVRSTPVGTSHGSFMQHSTAQSSDDLGLSHSLDSPSSP----GLWPPQSLSGISSR 541
Query: 370 QPHQGISAYGREAPVNVHGSS-NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
IS GR P + G + + +++T T ++ +P V G G +++ +R
Sbjct: 542 ----AISDAGRGLPSHRSGVQLGSGNKTAIVTNTTVEIVVPDDVISLVYGENGTNLTRLR 597
Query: 429 RSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ SGA V + E + + + ISGT + Q AQ L+ F+
Sbjct: 598 QISGAKVIVHEPDPITNDRLIVISGTPDETQAAQSLLHAFI 638
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI------- 179
PG FRML A ++G +IG+ G IK++ + T +I++ + P + +R V +
Sbjct: 55 PGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALT 114
Query: 180 ----------SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVP 229
++ EE E+S A +GLL+V +RI++ G V +LL
Sbjct: 115 SRVFLEQNSGASGEEVEAS--KAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLAD 172
Query: 230 ASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMEL 289
+Q GS+IGK G V+ I++ S C +RVL + LP A D ++E+ GD + KA+
Sbjct: 173 VAQVGSVIGKGGKVVEKIRKESGCRIRVL-TDKLPACAGPSDEMIEIEGDVWAIKKALLA 231
Query: 290 IGSHLRKF--LVDRSIIPL-FEMHMQMPNPQMDHI 321
+ L+ R++ P +H +P+ MDHI
Sbjct: 232 VSRRLQDCPPSEKRTVRPAEAVIHETLPDLHMDHI 266
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 140/324 (43%), Gaps = 69/324 (21%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-SAKEEP 185
P ++VFR L P K+GSIIG G+ K++ ET ++I+I + PG ER V I S EE
Sbjct: 40 PEDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEET 99
Query: 186 ESS------LPPAMDGLLRVHKRIVD---GLDSD-SSHAPSGTGGKVSTKLLVPASQAGS 235
S + PA D L RVH R++ +D D H +++ ++LVP+ Q G
Sbjct: 100 NVSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQ------QITVRMLVPSDQIGC 153
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+IGK G +++++ + +RVL +E LP AL D ++++ G+ + V KA+ + + L
Sbjct: 154 VIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVKKALYQVAARL- 212
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
H Q + P + GL
Sbjct: 213 --------------HDNPSRSQHQLLSSPSIFRSGAGLV--------------------- 237
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGS--SNAQSTPSMITQVTQQMQIPLSYA 413
PH G G + + + S S+ +S S + + ++ P
Sbjct: 238 --------------NPHAGTQVMGVTSLMGPYASYKSDGRSRSSSVKEFAVRLVCPTENV 283
Query: 414 DAVIGTAGASISYIRRSSGATVTI 437
AVIG G I +R+ SGA++ +
Sbjct: 284 GAVIGKGGGIIKQLRQESGASIKV 307
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 17/201 (8%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P + VG++IG+ G IK++ +E+ A IK+ + + +SAKE E
Sbjct: 271 EFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQ 330
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P +D +R+ R + + +S A ++T+LLVP+S+ G LIGK G + ++
Sbjct: 331 -SPTIDATMRLQPRSSEKTEKESGDAI------LTTRLLVPSSRVGCLIGKGGSIINEMR 383
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
++ +RVL E+LP A +DD +V++ GDA+ A+ + LR FE
Sbjct: 384 NSTRASIRVLSKENLPKVASEDDEMVQITGDANVAANALLQVLMRLRA--------NTFE 435
Query: 309 MHMQMP--NPQMDHIPPPQSW 327
M P +P + ++P S
Sbjct: 436 MEGSFPAFSPGLSYVPMSASM 456
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 166/381 (43%), Gaps = 58/381 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VFR+L KVGS+IG+ G ++ + ET A IKI+D P ER V+ISA+E E +
Sbjct: 345 VFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVD-TPDLDERLVVISARETLEQTYS 403
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA + ++R H RI ++ + P G V +LLV Q G L+G+ G + ++
Sbjct: 404 PAQEAVIRAHCRI-----AEIGYEP---GAAVVARLLVHGQQIGYLVGRGGHIINDMRRG 455
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRSIIPLFEM 309
+ +++ + + D VV+V+G+ V A+ I + +R F R +P F
Sbjct: 456 TGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMRPHVPNFNN 515
Query: 310 HMQMPNPQMDHIPP---PQSWGPPQGLPPS--GG-----------------PGYGHNPQY 347
H +P + PP P S G PS GG P Y HN +
Sbjct: 516 HPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAGGLRGTERPPYHSHPLDHQPAYPHNVSF 575
Query: 348 --------MPPPRQAESYYPPA-DLPPP----------MEKQPHQGISAYGREAPVNVHG 388
+P P E P + + P P + K P G R P G
Sbjct: 576 GGGNNMDGVPYPHGMERPGPGSFERPSPRSWTSQVSSEIPKGPTDGFGMVSRNEPYGSGG 635
Query: 389 SSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMT 448
P + + +M IP + + G +I+++++ SGA + + + + +
Sbjct: 636 -------PHFMGGTSMEMVIPQTLICHIYGENNNNIAHVQQISGAMLVVHDAKPGMFDGK 688
Query: 449 VEISGTASQVQTAQQLIQNFM 469
V +SGT Q++ AQ+L+ F+
Sbjct: 689 VIMSGTPDQIRAAQRLVHAFI 709
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 53/217 (24%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P P +++FR+L PA KV SI+ + + + ARI + + P E ++I A
Sbjct: 62 PSSPSDTLFRLLCPASKVSSIL-------RHLRDIPGARIHVDEPLPSCEECVLVILAGS 114
Query: 184 --EPESSLP----------------------------PAMDGLLRVHKRIV--------- 204
+P + P A LLR + IV
Sbjct: 115 PSKPTHTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGEN 174
Query: 205 -----DGLDSDSSHAPSG--TGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRV 257
DS + SG T G V +LL P+ Q G ++G+ G TV+ I++ S V++
Sbjct: 175 QEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKI 234
Query: 258 LGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+ P A D ++++ G+ S V KA+ + S L
Sbjct: 235 FPKDQNPACASPQDELIQISGNFSAVMKALSSVSSCL 271
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 95 EDIVPEDSQLQEKQENEVNLAVGSTEKKWPG--WPGESVFRMLVPAQKVGSIIGRKGEFI 152
E IV + E QE + A + + G G V R+L P+ +VG ++GR G+ +
Sbjct: 162 ESIVRMNEDSGENQEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTV 221
Query: 153 KKIVEETRARIKIL 166
+KI +E+ A +KI
Sbjct: 222 EKIRQESMAHVKIF 235
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 163/367 (44%), Gaps = 43/367 (11%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP--PGTTERAVMISAKEEPE 186
E FR+L +VG +IG+ G ++ + ET A I I GP +R + I+A E PE
Sbjct: 310 EVSFRILCSNDRVGGVIGKGGNIVRALQSETGATISI--GPLVAECEDRLITIAASENPE 367
Query: 187 SSLPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
S PA + V R ++ G + + + G V+ +L+VP+SQ G LIGK G V
Sbjct: 368 SRYSPAQKAAVLVFSRSIEVGFEKELDSGLN-KGSTVTVRLVVPSSQVGCLIGKGGVIVS 426
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV------ 299
I++A+ +R++G + +P A +D+VV++ G+ S V A+ LR L
Sbjct: 427 EIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNATGRLRDNLFVSTQNS 486
Query: 300 --DRSIIPL------------FEMH-MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN 344
RS+ L F H Q+P H ++ QG+ G N
Sbjct: 487 AGTRSLSSLRVDTSPYGIQQDFVPHGSQLP-ATTSHCLSRHTFA--QGIDH---LGLSRN 540
Query: 345 PQYMPPPRQAESYYPPADLPPPMEKQPHQGISAY--GREAPVNVHGSSNAQSTPSMITQV 402
+ P A + G+++ G E V GS +A ++T
Sbjct: 541 LDHPSSPGLWTRNLDLAGINSRSINDFSLGLTSRKGGLEL---VSGSKSA-----IVTNT 592
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
T ++ +P D V G G ++ +R+ SGA V I E R + + ISGT + Q AQ
Sbjct: 593 TVEIVVPDDTIDCVYGENGRNLVRLRQISGAKVVIHEPRPGTSDRIIVISGTPDETQAAQ 652
Query: 463 QLIQNFM 469
L+Q F+
Sbjct: 653 SLLQAFI 659
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 15/178 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA------ 181
G FR+L A ++G +IG+ G IK + + T A+I+I D P + +R +++ A
Sbjct: 43 GHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSC 102
Query: 182 ----KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKV-STKLLVPASQAGSL 236
+ E + A + LL+V RI L+ + G +V S +L+ ++QAGS+
Sbjct: 103 KVLLRNEEVVEVSKAQEALLKVFDRI---LEVAAEMEGVDVGDRVMSCRLVADSAQAGSV 159
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
IGK G V+ I++ + C +RVL +DLP+ A D ++E+ G S V KA+ + L
Sbjct: 160 IGKGGKVVERIKKETGCKIRVL-TDDLPLCASASDEMIEIEGRVSSVKKALVAVSQRL 216
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 166/381 (43%), Gaps = 58/381 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VFR+L KVGS+IG+ G ++ + ET A IKI+D P ER V+ISA+E E +
Sbjct: 345 VFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDTP-DLDERLVVISARETLEQTYS 403
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA + ++R H RI ++ + P G V +LLV Q G L+G+ G + ++
Sbjct: 404 PAQEAVIRAHCRI-----AEIGYEP---GAAVVARLLVHGQQIGYLVGRGGHIINDMRRG 455
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRSIIPLFEM 309
+ +++ + + D VV+V+G+ V A+ I + +R F R +P F
Sbjct: 456 TGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMRPHVPNFNN 515
Query: 310 HMQMPNPQMDHIPP---PQSWGPPQGLPPS--GG-----------------PGYGHNPQY 347
H +P + PP P S G PS GG P Y HN +
Sbjct: 516 HPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAGGLRGTERPPYHSHPLDHQPAYPHNVSF 575
Query: 348 --------MPPPRQAESYYPPA-DLPPP----------MEKQPHQGISAYGREAPVNVHG 388
+P P E P + + P P + K P G R P G
Sbjct: 576 GGGNNMDGVPYPHGMERPGPGSFERPSPRSWTSQVSSEIPKGPTDGFGMVSRNEPYGSGG 635
Query: 389 SSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMT 448
P + + +M IP + + G +I+++++ SGA + + + + +
Sbjct: 636 -------PHFMGGTSMEMVIPQTLICHIYGENNNNIAHVQQISGAMLVVHDAKPGMFDGK 688
Query: 449 VEISGTASQVQTAQQLIQNFM 469
V +SGT Q++ AQ+L+ F+
Sbjct: 689 VIMSGTPDQIRAAQRLVHAFI 709
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 53/217 (24%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P P +++FR+L PA KV SI+ + + + ARI + + P E ++I A
Sbjct: 62 PSSPSDTLFRLLCPASKVSSIL-------RHLRDIPGARIHVDEPLPSCEECVLVILAGS 114
Query: 184 --EPESSLP----------------------------PAMDGLLRVHKRIV--------- 204
+P + P A LLR + IV
Sbjct: 115 PSKPAHTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGEN 174
Query: 205 -----DGLDSDSSHAPSG--TGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRV 257
DS + SG T G V +LL P+ Q G ++G+ G TV+ I++ S V++
Sbjct: 175 QEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKI 234
Query: 258 LGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+ P A D ++++ G+ S V KA+ + S L
Sbjct: 235 FPKDQNPACASPQDELIQISGNFSAVMKALSSVSSCL 271
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 95 EDIVPEDSQLQEKQENEVNLAVGSTEKKWPG--WPGESVFRMLVPAQKVGSIIGRKGEFI 152
E IV + E QE + A + + G G V R+L P+ +VG ++GR G+ +
Sbjct: 162 ESIVRMNEDSGENQEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTV 221
Query: 153 KKIVEETRARIKIL 166
+KI +E+ A +KI
Sbjct: 222 EKIRQESMAHVKIF 235
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 156/351 (44%), Gaps = 48/351 (13%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VFR+L P KV ++G I+ + E +K+ D G+ E+ ++I+++E P+ L
Sbjct: 339 VFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELF 398
Query: 191 PAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
PA + LL + RIV+ L D ++ ++T+LLVP+S+ G G+ ++ ++
Sbjct: 399 PAQEALLHIQTRIVNLLPDKENV---------ITTRLLVPSSEIGCFEGRD-CSLSEMRR 448
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
+ ++++ E LP F D ++E+VG+ A+ + S LR +L R P
Sbjct: 449 LTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALVEVTSRLRSYLY-REFFP---- 503
Query: 310 HMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEK 369
+PPP P G +P + P R+ + A PP
Sbjct: 504 ---------KDMPPPSISAP--------GSLEASSPNNITPAREGHT----ASDPPTTNY 542
Query: 370 QPHQGISAY----------GREAPVNVHGSSNAQSTP-SMITQVTQQMQIPLSYADAVIG 418
Q Q I++ G N S P +++T+ T ++ IP +I
Sbjct: 543 QNVQAIASVQPSKDSGGTGGETVKQNETVPSVLNRIPVTLVTRSTLEVVIPEHAVPKLIT 602
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ ++ I SGA VT+ E R ++ISGT Q + AQ L+Q F+
Sbjct: 603 RSKNKLAQISEWSGANVTLLEDRLEATGKIIQISGTPEQTEKAQSLLQGFI 653
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 23/185 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPESSL 189
+R+L K G +IG+ G IK I + T A I + + PG ER + IS + +PE +
Sbjct: 69 YRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 128
Query: 190 P---PAMDGLLRVHKRIVDGLDSDS--------------SHAPSGTGGKVSTKLLVPASQ 232
P PA + L +H RI L+SD+ P G G +V+T+++V
Sbjct: 129 PQFSPAQEALFMIHDRI---LESDAGFGNGFGGNGDDDDDFGPRGGGNRVATRMVVSRMH 185
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDASGVHKAMELIG 291
G L+GK G ++ ++ + +R+L + +LP + +V+VVGD + V A+ I
Sbjct: 186 VGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANIS 245
Query: 292 SHLRK 296
S LR+
Sbjct: 246 SRLRE 250
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 156/351 (44%), Gaps = 48/351 (13%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VFR+L P KV ++G I+ + E +K+ D G+ E+ ++I+++E P+ L
Sbjct: 253 VFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELF 312
Query: 191 PAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
PA + LL + RIV+ L D ++ ++T+LLVP+S+ G G+ ++ ++
Sbjct: 313 PAQEALLHIQTRIVNLLPDKENV---------ITTRLLVPSSEIGCFEGRD-CSLSEMRR 362
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
+ ++++ E LP F D ++E+VG+ A+ + S LR +L R P
Sbjct: 363 LTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALVEVTSRLRSYLY-REFFP---- 417
Query: 310 HMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEK 369
+PPP P G +P + P R+ + A PP
Sbjct: 418 ---------KDMPPPSISAP--------GSLEASSPNNITPAREGHT----ASDPPTTNY 456
Query: 370 QPHQGISAY----------GREAPVNVHGSSNAQSTP-SMITQVTQQMQIPLSYADAVIG 418
Q Q I++ G N S P +++T+ T ++ IP +I
Sbjct: 457 QNVQAIASVQPSKDSGGTGGETVKQNETVPSVLNRIPVTLVTRSTLEVVIPEHAVPKLIT 516
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ ++ I SGA VT+ E R ++ISGT Q + AQ L+Q F+
Sbjct: 517 RSKNKLAQISEWSGANVTLLEDRLEATGKIIQISGTPEQTEKAQSLLQGFI 567
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPESSL 189
+R+L K G +IG+ G IK I + T A I + + PG ER + IS + +PE +
Sbjct: 6 YRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 65
Query: 190 P---PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
P PA + L +H RI++ S A G G ++V G L+GK G ++
Sbjct: 66 PQFSPAQEALFMIHDRILE------SDAGFGNG------MVVSRMHVGCLLGKGGKIIEQ 113
Query: 247 IQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
++ + +R+L + +LP + +V+VVGD + V A+ I S LR+
Sbjct: 114 MRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSRLRE 164
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 27/188 (14%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES- 187
++V+R L P +K+GSIIGR G+ K++ ET++ I+I + PG ER V I + E +
Sbjct: 42 DTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNP 101
Query: 188 ------SLPPAMDGLLRVHKRIVDG---LDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+ PA D L RVH RIV G D + A +V+ ++LVP+ Q G +IG
Sbjct: 102 FGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQ-----QVTVRMLVPSDQIGCVIG 156
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVV------------EVVGDASGVHKA 286
K G +++I+ + +R+L E LP AL D ++ +++GDAS V KA
Sbjct: 157 KGGQVIQNIRSETRAQIRILKDEHLPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKA 216
Query: 287 MELIGSHL 294
+ + S L
Sbjct: 217 LHQLASRL 224
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 157 EETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS 216
+E+ A IK+ + + ISAKE E P +D LR+ R + + +SS +
Sbjct: 322 QESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEKAERESSDSV- 379
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
V+T+LLVP+S+ G LIGK G + ++ + +R+L E+LP A +DD +V++
Sbjct: 380 -----VTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQI 434
Query: 277 VGDASGVHKAMELIGSHLRKFLVDR 301
G+ + A+ + L+ L +R
Sbjct: 435 TGELNVASNALLQVTLRLKANLFER 459
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VFRM+ VG +IG+ G I+ + ET A +K++D + ER ++ISA+E E
Sbjct: 156 EIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMM 215
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P+ D LLRV+ +I + SS P+ +LLVPA G L+GK G + ++
Sbjct: 216 RSPSQDALLRVYSKISEASMDKSSSVPA--------RLLVPAQHIGCLLGKGGSIIAEMR 267
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
+ + +R+ G E +P A ++D +V+V G + A+ I +R ++
Sbjct: 268 KLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLII 318
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 100/170 (58%), Gaps = 5/170 (2%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR++VP++++G +IG+ G I+K+ EET+A IKI D ER ++IS+K+ E+S+
Sbjct: 70 LFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVT 128
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTG--GKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A L ++ I+ S GTG + +LL+ SQAGSLIG G ++ ++
Sbjct: 129 DAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLR 188
Query: 249 EASNCIVRVLGAEDLPVFAL--QDDRVVEVVGDASGVHKAMELIGSHLRK 296
+S + +L LP+ A + DRVV++ GD V KA+E IG+ LRK
Sbjct: 189 NSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRK 238
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 160/361 (44%), Gaps = 53/361 (14%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P GE FR+L P+ K+G +IGR G IK I +E+ ARI + D E + I++ E
Sbjct: 304 PKCSGELEFRVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITSTE 363
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+ A++ +L + +I D D +++ +LLVP G LIG+ G
Sbjct: 364 AIDDVKSAAVEAVLLLQAKINDYEDD-----------RMNLRLLVPNKVIGCLIGRGGSI 412
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
V +++ + + ++ D P A D +VEV G+A + A+ I LR+ ++ S+
Sbjct: 413 VNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREDVLKESV 471
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPP--RQAESYYPPA 361
E + ++ +G LP HNPQ P R+ ES
Sbjct: 472 ----ESQNSDRDGKLTVATSDSLYGSSLSLPAL----LPHNPQIAPLSYDRRGES----- 518
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQST-------PSMITQVTQ------QMQI 408
+ + + R + +G S+ Q T PS ++ + +M I
Sbjct: 519 ----------ERALEVFPRTSS---YGYSSMQVTDDGYGGLPSYTSKAYEEHLPRDEMTI 565
Query: 409 PLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF 468
P S V+G G ++ IR+ SGA + I E++ + ISGT+ Q Q+A+ LI+ F
Sbjct: 566 PASGLSKVMGKRGTNLDNIRKISGAHIEIIESKSSRHDHIAYISGTSEQRQSAENLIKAF 625
Query: 469 M 469
+
Sbjct: 626 I 626
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 163/383 (42%), Gaps = 50/383 (13%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-------- 179
G ++R+L P +GS+IG+ G I I ++T A++K++D PG +R +++
Sbjct: 39 GLVLYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRD 98
Query: 180 -SAKEEPESSLPPAMDGLLRVHKRIVDGL-----DSDSSHAPSGTGGKVSTKLLVPASQA 233
A+ + + A D LLRVH IVD L DSD + +LVPASQA
Sbjct: 99 LDAEVDDNEPVCAAQDALLRVHNAIVDTLHRNRRDSDKKNTEEAN-------ILVPASQA 151
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVL---GAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
++IGK G +K ++ S ++V ++ A+ D V++ G A V KA+ +
Sbjct: 152 SNVIGKSGAVIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGV 211
Query: 291 GSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPP 350
+ + K +I P IP P P + PS P Y + Y P
Sbjct: 212 STIIYKHPSKENI------------PLETSIPEPT----PSIIIPSELPVYPASNFYSAP 255
Query: 351 PRQAESYYPPADLPPPMEKQPHQGISA--YGREAPV--NVHGSSNAQSTPSMITQVTQQM 406
S +P + P + A +GR P+ ++ S P ++ ++
Sbjct: 256 DAAIPSVHPSLSILGSTHHVPELALPADDHGR-LPIYPSILPVIPTYSAPKCSGELEFRV 314
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
P VIG GA+I IR+ SGA + + + + E + I+ T A ++
Sbjct: 315 LCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITST-----EAIDDVK 369
Query: 467 NFMAEAAAPSQAQMGASADQGYN 489
+ EA QA++ D N
Sbjct: 370 SAAVEAVLLLQAKINDYEDDRMN 392
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 155/360 (43%), Gaps = 41/360 (11%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT-TERA 176
S+ + G E VFR+L GS+IG++G ++ + +T A I I P ER
Sbjct: 279 SSNRDSKGGEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASI-IFAAPLSEHAERI 337
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
V ISA E ES PA D ++ V RI++ S V+ +LLV S S
Sbjct: 338 VTISAIESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNSW 397
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
G +G + ++E + +++L E +P A DD VV++ G+ V A+ I S +R
Sbjct: 398 SGNEGQVILELREVTGADIQILHGESVPNGASDDDVVVQITGEYRCVQNALYKITSRIRD 457
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWG----PPQGLPPSGGPGYGHNPQYMPPPR 352
L PN + P +W P +G P S G + +++P
Sbjct: 458 NL--------------SPNEAVTEARPKSNWKVNKDPVKGKPFSRGKSAFPSGRFLPRNA 503
Query: 353 --QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
AE+ +L + + +G N +T +T T ++ +
Sbjct: 504 GVHAETILQNGELHTDLSENLERG--------------RGNMFAT---VTNTTVEIIVSE 546
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+V G G ++ IR+ SGATVT+ + + G G V ISGT Q AQ L+Q F+
Sbjct: 547 HVFGSVYGEDGGNLDRIRQISGATVTVYDPSVGTSGGKVV-ISGTPDQTLAAQSLLQAFI 605
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 137/343 (39%), Gaps = 57/343 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
PG+ FR++ A VG +IG G + ++ ET +I D +R +++ P
Sbjct: 47 PGQIAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSVSPR 106
Query: 187 SSL----------PPAMDGLLRVHKRIVDGLDSDSS-HAPSGTGGKVSTKLLVPASQAGS 235
L A + ++RV +R V GL+++ ++ +V +KLL SQ G+
Sbjct: 107 KGLQLGDGGEVEVSSAQEAIVRVFER-VWGLEAEKGVNSNRAVNSEVFSKLLAHTSQIGA 165
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
++GK G + +I+ ++ +RV P A +D+ +V + G V KA+ + L+
Sbjct: 166 VVGKGGKNITAIRNSTGAKIRVCPP---PQCATKDEELVLITGGILAVKKALISVSHCLQ 222
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
PL ++ P IP S+
Sbjct: 223 D------CPPLCKV------PVSSSIPTVSSF-------------------------DRS 245
Query: 356 SYYPPADLPPPMEK--QPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
S P A+L P + +G+S Y E N + SSN S +V ++ + A
Sbjct: 246 SSDPNAELFPRLNSLLTSMEGLSIY--ERTTNSNESSNRDSKGGE-HEVVFRLLCSNNVA 302
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
+VIG GA + + +GA++ E V IS S
Sbjct: 303 GSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAIES 345
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 167/373 (44%), Gaps = 75/373 (20%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
E+ PG +V+R+L P+ +GS+IG+ G+ IK + +ETR++I++ D PG ER ++I
Sbjct: 33 EQTMPG-ADSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVI 91
Query: 180 SAK-------------EEPESSLPPAMDGLLRVHKRIV---DGLDSDSSHAPSGTGGKVS 223
+ + + PA DGLLRVH IV G D+D+
Sbjct: 92 FSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQ-----D 146
Query: 224 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGV 283
+LLV SQ GSLIGK G ++ ++ S +++ ++LP A D +V + GDA+ V
Sbjct: 147 ARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAV 206
Query: 284 HKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWG------PPQGLPPSG 337
KA+ + + L K +P + IP W LPPSG
Sbjct: 207 KKALYAVSAFLFK------------------HPPKEQIP----WSVILPETNQSSLPPSG 244
Query: 338 GPGYGHNP--QYMPPPRQAESYYPPADLPPPMEKQPHQ--GISAYGREA----------- 382
P + P Y+P Q +S + +L P+ + G+ YG EA
Sbjct: 245 VPTF---PPANYLP---QGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPAL 298
Query: 383 -PVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETR 441
+ G+S + T + + ++ P VIG G +I +R +GA++ +++ +
Sbjct: 299 PSFSKFGNSTTKKTSE---EFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQ 355
Query: 442 GVPGEMTVEISGT 454
E + +S T
Sbjct: 356 TESDERVIVVSAT 368
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R+L P K+G +IG+ G IK + +T A I++ D + ER +++SA E +
Sbjct: 315 EFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVSATELADDR 374
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ P ++ +L + + D D G +ST+ LVP+ G L+GK G + ++
Sbjct: 375 VSPTIEAVLLLQGKTSGTTDKD---------GAISTRFLVPSKHIGCLLGKGGNIISEMR 425
Query: 249 EASN 252
S+
Sbjct: 426 ANSS 429
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 168/372 (45%), Gaps = 56/372 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMP--NPQMDHIPPPQS-------------WGPPQGLPPSGGPGYGHNPQYMPPPR 352
E Q P + + P P S G P P NP PP
Sbjct: 168 ETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 227
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
+A + +P P + HQ ++ P+ HG++ ++ TQ T ++ IP +
Sbjct: 228 EAYTIQGQYAIPQPDLTKLHQ-LAMQQSHFPMT-HGNTGFSASLDASTQTTHELTIPNNL 285
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
+IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLIN----- 339
Query: 472 AAAPSQAQMGAS 483
A S+ MG S
Sbjct: 340 ARLSSEKGMGCS 351
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 120/227 (52%), Gaps = 18/227 (7%)
Query: 78 VPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVP 137
+P + VP P P DI ++ + + + + GS K+ + +FR++VP
Sbjct: 25 IPMNTVPPVSFP----PPDIYAATAKRRRDEFDVADEPEGSAAKRAKAQ--DVIFRIVVP 78
Query: 138 AQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLL 197
++++G +IG+ G I+KI EET+A IKI D ER ++IS+KE + + A + L
Sbjct: 79 SRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISSKES-DCVVSDAENALK 137
Query: 198 RVHKRIVDGLDSDSSHAPS------GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ I L D S A S G G + +LL+ SQAGSLIG G ++ ++ +S
Sbjct: 138 KIATLI---LKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVSGQNIEKLRNSS 194
Query: 252 NCIVRVLGAEDLPVFAL--QDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ VL LP+ A + DRVV++ GD V KA+E IG LR+
Sbjct: 195 GATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLRE 241
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 396 PSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA 455
P+ VT +M + + +IG G++IS IR SGA + + +G ++ GTA
Sbjct: 268 PTSADYVTLEMMVSETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEKKHRHIQFGGTA 327
Query: 456 SQVQTAQQLIQNF----MAEAAAPSQAQMGASAD 485
QV A+Q + + + + A QAQ+ A+
Sbjct: 328 QQVALAKQRVDEYIYSQLVQQAGGGQAQLSLHAE 361
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 112/204 (54%), Gaps = 12/204 (5%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR++VP++++G +IG+ G I+K+ EET+A IKI D ER ++IS+K+ E+S+
Sbjct: 70 LFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVT 128
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTG--GKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A L ++ I+ S GTG + +LL+ SQAGSLIG G ++ ++
Sbjct: 129 DAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLR 188
Query: 249 EASNCIVRVLGAEDLPVFAL--QDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
+S + +L LP+ A + DRVV++ GD V KA+E IG+ LR + P
Sbjct: 189 NSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR-------VNPP 241
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPP 330
++ P + + PPQS+ P
Sbjct: 242 RQVISVSPTYNYNTMHPPQSYMDP 265
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 158/356 (44%), Gaps = 60/356 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA----KEEPE 186
V+R+L P + +GS+IG+ G+ I I +ETRA+IK++D PG +R + I KE+ E
Sbjct: 37 VYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVE 96
Query: 187 --------SSLPPAMDGLLRVHKRIVDGL----DSDSSHAPSGTGGKVSTKLLVPASQAG 234
+L A D LL+VH I + L D D K ++L+P+SQ+
Sbjct: 97 VDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQR-----DKEQCQILIPSSQSA 151
Query: 235 SLIGKQGGTVKSIQEASNCIVRVL---GAEDLPVFALQDDRVVEVVGDASGVHKAMELIG 291
++IGK G T+K ++ + +++ + + A+ D + G+ GV +A+ I
Sbjct: 152 NVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAIS 211
Query: 292 SHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSW--GPPQGLPPSGGPGYGHNPQYMP 349
S + KF P + IP + PP + PS P Y Y
Sbjct: 212 SIMYKF------------------PPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLY-- 251
Query: 350 PPRQAESYYPPADLPPPMEKQPHQGISAY---GREAPVNVHGSSNAQSTPSMIT------ 400
A+ PP +PP + Q Q + Y G P+ SS+ P I+
Sbjct: 252 --PSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLY---SSSLPVVPGGISGHPPSE 306
Query: 401 QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
++ ++ P VIG G +I IR++SGA V + +T+ E + IS S
Sbjct: 307 ELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFES 362
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E V R+L P +G +IG+ G IK I + + AR+++ D E + IS+ E +
Sbjct: 307 ELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDL 366
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L + ++I D GG V +LL+P+ G +IGK G + I+
Sbjct: 367 KSMAVETVLLLQEKIND-----------DEGGTVIMRLLIPSKVIGCIIGKSGSIINEIR 415
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+++ +R+ + L A D +VEV G V A+ I LR
Sbjct: 416 KSTRADIRISKGDKLKC-ASSSDELVEVTGKVGCVRDALVQIVLRLR 461
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG 168
G + R+L+P++ +G IIG+ G I +I + TRA I+I G
Sbjct: 387 GTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKG 427
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 168/374 (44%), Gaps = 77/374 (20%)
Query: 120 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
E+ PG +V+R+L P+ +GS+IG+ G+ IK + +ETR++I++ D PG ER ++I
Sbjct: 33 EQTMPG-ADSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVI 91
Query: 180 SAK-------------EEPESSLPPAMDGLLRVHKRIV---DGLDSDSSHA-PSGTGGKV 222
+ + + PA DGLLRVH IV G D+D+ P
Sbjct: 92 FSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQ------ 145
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
+LLV SQ GSLIGK G ++ ++ S +++ ++LP A D +V + GDA+
Sbjct: 146 DARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAA 205
Query: 283 VHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWG------PPQGLPPS 336
V KA+ + + L K +P + IP W LPPS
Sbjct: 206 VKKALYAVSAFLFK------------------HPPKEQIP----WSVILPETNQSSLPPS 243
Query: 337 GGPGYGHNP--QYMPPPRQAESYYPPADLPPPMEKQPHQ--GISAYGREA---------- 382
G P + P Y+P Q +S + +L P+ + G+ YG EA
Sbjct: 244 GVPTF---PPANYLP---QGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPA 297
Query: 383 --PVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQET 440
+ G+S + T + + ++ P VIG G +I +R +GA++ +++
Sbjct: 298 LPSFSKFGNSTTKKTSE---EFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDA 354
Query: 441 RGVPGEMTVEISGT 454
+ E + +S T
Sbjct: 355 QTESDERVIVVSAT 368
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 155/342 (45%), Gaps = 22/342 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R+L P K+G +IG+ G IK + +T A I++ D + ER +++SA E +
Sbjct: 315 EFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVSATELADDR 374
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ P ++ +L + + D D G +ST+ LVP+ G L+GK G + ++
Sbjct: 375 VSPTIEAVLLLQGKTSGTTDKD---------GAISTRFLVPSKHIGCLLGKGGNIISEMR 425
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + +R+ ++ P+ +++ +V+V G+ A+ I LR+ +F+
Sbjct: 426 KQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKRLRE--------NIFK 477
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
N D + P S P +P S YG + PR A + A L
Sbjct: 478 DKDGASN--TDSVLPLSSLSVPSAVPLSSS--YGTRKYDIVSPRGAIAGRSAAGLSGFGA 533
Query: 369 KQPHQGISAYGR-EAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYI 427
Q G A + AP G + + + + IP S +V+G G++IS+I
Sbjct: 534 LQAGTGSYASLQPYAPTRTFGIGLSGGHLNSSLAPSHEFAIPNSAVSSVLGRGGSNISHI 593
Query: 428 RRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
R SGATV +++ + VEISGT Q AQ LIQ FM
Sbjct: 594 REISGATVKLRDPITGASDRVVEISGTPEQSHAAQSLIQAFM 635
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 22/182 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR++VP+ K+G +IG++G I+KI E+T+A IKI D ER ++IS+KE E+
Sbjct: 52 IFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKEN-ENGAT 110
Query: 191 PAMDGLLRVHKRIVD--------------GLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
A + L R+ + I++ G ++ H + T +LL+ SQAGSL
Sbjct: 111 DAENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANT-----IRLLIAGSQAGSL 165
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVF--ALQDDRVVEVVGDASGVHKAMELIGSHL 294
IG G + ++ +S ++ VL LP+ A + DRVV++ GD V KA+E IG L
Sbjct: 166 IGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEIGCQL 225
Query: 295 RK 296
R+
Sbjct: 226 RE 227
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
VT +M +P + +IG +G++IS IR SGA + + +G ++++G++ QV A
Sbjct: 259 VTMEMMVPETMMGGLIGRSGSNISRIRVESGAVIKVHGGKGAQKHRHIQLAGSSQQVALA 318
Query: 462 QQLIQNFM 469
+Q + ++
Sbjct: 319 KQRVDEYI 326
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 33/200 (16%)
Query: 125 GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-------GPPGTTERAV 177
G + R+L+ + GS+IG G+ I K+ + A I +L ++R V
Sbjct: 146 GHVAANTIRLLIAGSQAGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVV 205
Query: 178 MISAKEEPESSLPPAMDGL------LRVH--KRIVDGLDSDS-------SHAPSGTGGKV 222
IS +P + L LR + K+++ S + +AP V
Sbjct: 206 QISG------DVPVVLKALEEIGCQLRENPPKQVISISPSYNYSAVPFQQYAPQAAADYV 259
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
+ +++VP + G LIG+ G + I+ S +++V G + Q R +++ G +
Sbjct: 260 TMEMMVPETMMGGLIGRSGSNISRIRVESGAVIKVHGGK-----GAQKHRHIQLAGSSQQ 314
Query: 283 VHKAMELIGSHLRKFLVDRS 302
V A + + ++ LV ++
Sbjct: 315 VALAKQRVDEYIYSQLVQQA 334
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 151/334 (45%), Gaps = 51/334 (15%)
Query: 139 QKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLR 198
Q+VGSIIG+KG+ IKK EE+ A+I I DG ER V ++ E ++ A + R
Sbjct: 2 QEVGSIIGKKGDNIKKFREESGAKINISDG--SCPERIVTVTGSTE---AILKAFSLIAR 56
Query: 199 VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVL 258
+ + S+ SH P V+ +L+VPASQ GSLIGK G +K I+EA I +
Sbjct: 57 KFEEVSTSSHSNGSHLPKP---PVTLRLIVPASQCGSLIGKGGSKIKEIREARASIQ--V 111
Query: 259 GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQM 318
+E LP +R V V G A + K I + + M+ P P+
Sbjct: 112 ASEMLPN---STERAVTVSGTADAITKC----------------IYQICCVMMESP-PKG 151
Query: 319 DHIPPPQSWGPPQGLPP---SGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGI 375
IP + P +PP +GG Y QY +P P + HQ
Sbjct: 152 ATIP----YRPKPAMPPVIFAGGQAYTVQGQYA--------------IPHPDLTKLHQLA 193
Query: 376 SAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATV 435
+ P + G+ N Q+ + + T +M IP +IG G+ I+ IR+ SGAT+
Sbjct: 194 LQHAPLLPGHSVGAINPQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATI 253
Query: 436 TIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
I + + TV ISGT + AQ LI M
Sbjct: 254 KISNSEEGSKDRTVTISGTPEAINLAQYLINTSM 287
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 66 DQLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPG 125
+ E+ + ++ + PE V E I+ S + K E EV+ + S P
Sbjct: 16 KKFREESGAKINISDGSCPERIVTVTGSTEAILKAFSLIARKFE-EVSTSSHSNGSHLPK 74
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTTERAVMIS 180
P R++VPA + GS+IG+ G IK+I E RA I++ + P +TERAV +S
Sbjct: 75 PP--VTLRLIVPASQCGSLIGKGGSKIKEI-REARASIQVASEMLPNSTERAVTVS 127
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P +G IIG+ G I +I + + A IKI + G+ +R V IS E + ++
Sbjct: 226 IPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLINT 285
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTG 219
+ +HK + LD S+H S +G
Sbjct: 286 SMELHKNLT--LDLTSNHPASTSG 307
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 164/379 (43%), Gaps = 39/379 (10%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-------- 179
G ++R+L P +GS+IG+ G I I +T A++K++D PG +R +++
Sbjct: 39 GLVLYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRD 98
Query: 180 -SAKEEPESSLPPAMDGLLRVHKRIVDGLDS-DSSHAPSGTGGKVSTKLLVPASQAGSLI 237
A+ + + A D LLRVH IVD L + +H S +LVPASQA ++I
Sbjct: 99 LDAEGDDNEPVCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTEEANILVPASQASNVI 158
Query: 238 GKQGGTVKSIQEASNCIVRVL---GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
GK G +K ++ S ++V ++ A+ D V++ G A V KA+ + + +
Sbjct: 159 GKSGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVSTII 218
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQA 354
K + IPL +P+P P + PS P Y + Y P
Sbjct: 219 YKH-PSKENIPL---ETSIPDPT------------PSIIIPSELPVYPASNFYSAPDAAI 262
Query: 355 ESYYPPADLPPPMEKQPHQGISA--YGREAPV--NVHGSSNAQSTPSMITQVTQQMQIPL 410
S +P + P + A +GR P+ ++ S P ++ ++ P
Sbjct: 263 PSVHPSMSVLGSTRHVPELAVPADDHGR-LPIYQSILPVIPTYSAPKCSGELEFRVLCPG 321
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG GA+I IR+ SGA + + + + E + I T S +++
Sbjct: 322 GKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDD-----VKSAAV 376
Query: 471 EAAAPSQAQMGASADQGYN 489
EA QA++ S D N
Sbjct: 377 EAVLLLQAKINDSEDDRMN 395
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 154/359 (42%), Gaps = 49/359 (13%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P GE FR+L P K+G +IGR G IK I +E+ ARI + D E + I + E
Sbjct: 307 PKCSGELEFRVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTE 366
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+ A++ +L + +I D D +++ +LLVP G LIG+ G
Sbjct: 367 STDDVKSAAVEAVLLLQAKINDSEDD-----------RMNLRLLVPNKVIGCLIGRGGSI 415
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
V +++ + + ++ D P A D +VEV G+A + A+ I LR+ ++ S+
Sbjct: 416 VNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREAVLKESV 474
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
E + Q+ +G LP HN Q P L
Sbjct: 475 ----ESQNSDRDGQLTVAASDSLYGSSLPLPAL----LPHNQQIAP-------------L 513
Query: 364 PPPMEKQPHQGISAYGREAPVNVHGSSNAQST-------PSMITQVTQ------QMQIPL 410
+P + + + R + +G S+ Q T PS ++ + +M +P
Sbjct: 514 GYDRRGEPERALEVFPRTSS---YGYSSMQVTDDGYGGLPSYASKAYEEHVPRLEMTVPA 570
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
S V+G G ++ IR+ SGA + I E + E ISGT+ Q +A+ LI+ F+
Sbjct: 571 SGISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHEHIAYISGTSEQRHSAENLIKAFI 629
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 14/172 (8%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK------ 182
++V+R L P +K GSIIGR GE K+I ET+A ++I + PG ER V I +
Sbjct: 17 DTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETNR 76
Query: 183 -EEPESSLPPAMDGLLRVHKRIV----DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
E+ E + PA D L +VH IV D + V+ ++LVP+ Q G LI
Sbjct: 77 IEDDEDFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIGCLI 136
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPV--FALQDDRVVEVVGDASGVHKAM 287
GK G ++ ++ +N +RV+ ++LP+ AL D +++++GD S V +A+
Sbjct: 137 GKGGQVIQKLRNDTNAQIRVIN-DNLPICALALSHDELLQIIGDPSAVREAL 187
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 14/178 (7%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTER---AVMISAKEEPESSLP 190
+ PA+ VG +IG+ G FI + +E+ A IK+ P T E + ISAKE E
Sbjct: 248 FICPAENVGGVIGKGGCFINQTRQESGATIKV--HTPETDEDDDCIIFISAKEFFEDQ-S 304
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
P ++ LR+ R + + DSS + +ST++L+P+SQ G LIGK G + ++
Sbjct: 305 PTVNAALRLQTRCSEKVGKDSSDSA------ISTRVLIPSSQVGCLIGKGGALISEMRSV 358
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK--FLVDRSIIPL 306
+ +R+ ED+P A +++ +V++ G KA+ + LR F +DR ++ L
Sbjct: 359 TKANIRIFQGEDVPRIARENEEMVQITGSLDAAIKALTQVMLRLRANVFDMDRGLVLL 416
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 158/356 (44%), Gaps = 60/356 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA----KEEPE 186
V+R+L P + +GS+IG+ G+ I I +ETRA+IK++D PG +R + I KE+ E
Sbjct: 37 VYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVE 96
Query: 187 --------SSLPPAMDGLLRVHKRIVDGL----DSDSSHAPSGTGGKVSTKLLVPASQAG 234
+L A D LL+VH I + L D D K ++L+P+SQ+
Sbjct: 97 VDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRD-----KEQCQILIPSSQSA 151
Query: 235 SLIGKQGGTVKSIQEASNCIVRVL---GAEDLPVFALQDDRVVEVVGDASGVHKAMELIG 291
++IGK G T+K ++ + +++ + + A+ D + G+ GV +A+ I
Sbjct: 152 NVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAIS 211
Query: 292 SHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSW--GPPQGLPPSGGPGYGHNPQYMP 349
S + KF P + IP + PP + PS P Y Y
Sbjct: 212 SIMYKF------------------PPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLY-- 251
Query: 350 PPRQAESYYPPADLPPPMEKQPHQGISAY---GREAPVNVHGSSNAQSTPSMIT------ 400
A+ PP +PP + Q Q + Y G P+ SS+ P I+
Sbjct: 252 --PSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLY---SSSLPVVPGGISGHPPSE 306
Query: 401 QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
++ ++ P VIG G +I IR++SGA V + +T+ E + IS S
Sbjct: 307 ELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFES 362
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E V R+L P +G +IG+ G IK I + + AR+++ D E + IS+ E +
Sbjct: 307 ELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDL 366
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L + ++I D GG V +LL+P+ G +IGK G + I+
Sbjct: 367 KSMAVETVLLLQEKIND-----------DEGGTVIMRLLIPSKVIGCIIGKSGSIINEIR 415
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+++ +R+ + L A D +VEV G V A+ I LR
Sbjct: 416 KSTRADIRISKGDKLKC-ASSSDELVEVTGKVGCVRDALVQIVLRLR 461
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
+M IP + A VIG GA+I+ IR+ SGA + I +++ G+ ISGT+ Q +TA+ L
Sbjct: 558 EMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENL 617
Query: 465 IQNFM 469
IQ F+
Sbjct: 618 IQAFI 622
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG 168
G + R+L+P++ +G IIG+ G I +I + TRA I+I G
Sbjct: 387 GTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKG 427
>gi|413949911|gb|AFW82560.1| hypothetical protein ZEAMMB73_842471 [Zea mays]
Length = 418
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 81/134 (60%), Gaps = 9/134 (6%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSL 189
S + +KVG+IIG KGE +K++ EETRA ++I+ G E+AV+I +E+ + L
Sbjct: 107 SACTTFIQRKKVGAIIGHKGERVKRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPL 166
Query: 190 PPAMDGLLRVHKRIV--DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
PPAMD LLRV+++ + D LD G + ++L P+ QA SLIG+ G + SI
Sbjct: 167 PPAMDALLRVYQQTINNDSLD-------VGPDNVIVRQILAPSEQAASLIGEHGVMINSI 219
Query: 248 QEASNCIVRVLGAE 261
EAS +RVLG E
Sbjct: 220 MEASQTDIRVLGNE 233
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 156/360 (43%), Gaps = 65/360 (18%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI--SAKEEPESS 188
++R+L P VG +IG+ G+ I I T+A+IK+ D G ++R + I S KE+ E
Sbjct: 39 IYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKKEEE 98
Query: 189 ----------LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
L A D LL+V+ IV SD + K LLVP+SQ+ SLIG
Sbjct: 99 IDFMKSETEPLCCAQDALLKVYDAIV---ASDEENIKIDRDDKKECLLLVPSSQSFSLIG 155
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLP----VFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+ + V+V+ ++D+ V A+ D +V + G+ V KA+ + + L
Sbjct: 156 KAGENIKRIRSTTRASVKVV-SKDVSDPSHVCAMDYDNIVVISGEPESVKKALFAVSAIL 214
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIP-------PPQSWGPPQGLPPSGGP--GYGHNP 345
K NP+ +HIP P S L S P G+ N
Sbjct: 215 YKI-----------------NPR-EHIPLDSTGQDVPASIIVSSDLSNSVYPQTGFYSNQ 256
Query: 346 QYMPPPRQAESYYPPADLPPPMEKQPHQGIS--------AYGREAPVNVHGSSNAQSTPS 397
++ R Y A + QG + + PV HG + +
Sbjct: 257 DHILQQRAGVPSYFNA-----LSVSNFQGYAETAANPMPVFASSLPV-THGFGGSSRSKE 310
Query: 398 MITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQ 457
++ +V PLS VIG G++I IR +SG+ + + ++R G+ I TA++
Sbjct: 311 LVLKVL----CPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDECVIIVTATE 366
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 56/345 (16%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG--PPGTTERAVMISAKEEPE 186
E V ++L P + +IG+ G IK+I E + + I++ D G E ++++A E P+
Sbjct: 310 ELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDECVIIVTATESPD 369
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
A++ +L + + I D D++ KV +L V + G +IGK G +
Sbjct: 370 DMKSMAVEAVLLLQEYINDE-DAE----------KVKMQLFVSSKDIGCVIGKSGSVINE 418
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-FLVDRSIIP 305
I++ +N ++ + + D +VEV G+ S V A+ I LR+ L DR +
Sbjct: 419 IRKRTN--------ANICISKGKKDDLVEVAGEISSVRNAIIQIVLRLREDVLGDRDSVA 470
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
PP S GY LP
Sbjct: 471 ASR-------------KPPARTDNYSLFSGSSNAGY--------------------TLPS 497
Query: 366 PMEKQPHQGISAYGRE-APVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
M G YG A NV GS + S + + ++ IP + V+G G ++
Sbjct: 498 FMSSASSSGFHGYGSFPAGDNVFGSVSPYSFGRLPSSSALEILIPANAMSKVMGKGGGNL 557
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
IRR SGA + I +++ G+ +SGT Q++ A+ L+Q F+
Sbjct: 558 ENIRRISGAMIEISDSKTSQGDHIALLSGTLEQMRCAENLVQAFI 602
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 168/355 (47%), Gaps = 46/355 (12%)
Query: 125 GWPGES-VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
G+ GE VFR+L P +KV IIG ++ + E +K+ D G+ E+ ++I+++E
Sbjct: 318 GFYGEELVFRILCPIEKVDRIIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSEE 377
Query: 184 EPESSLPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGG 242
P+ L PA + LL V RIVD LD D++ ++T+L+VP+S+ L GK
Sbjct: 378 GPDDELFPAQEALLHVQTRIVDLVLDKDNT---------ITTRLVVPSSEIECLDGKD-V 427
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL---- 298
++ I+ + +++L ++LP+ + D +V++VG+ A+ + S LR +L
Sbjct: 428 SLSEIRRLTGANIQILPRDELPLCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDF 487
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY 358
R +PL P P +P + +P + P N Q +
Sbjct: 488 FQRDTVPL-------PAP----LPGAAASSSNNIVPVTETPTTYQNLQTV---------- 526
Query: 359 PPADLPPPMEKQPHQGISAYGREAPV----NVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
A LP K+ + G++ ++ N + P ++T+ T ++ +P
Sbjct: 527 -AAALP---SKETGGSSTETGKQKESDRRDDLLSGLNRIAVP-LVTRSTLEVVLPEYAVP 581
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
++ + + ++ I SGA VT+ E R + ++ISGT Q + AQ L+Q F+
Sbjct: 582 KLVAKSKSKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFI 636
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 96/181 (53%), Gaps = 19/181 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPESSL 189
+R+L K G +IG+ G IK I + T A I + + PG ER + IS + +PE +
Sbjct: 63 YRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRRRDPEGRM 122
Query: 190 P---PAMDGLLRVHKRIVDGLDSDSSHAPS----------GTGGKVSTKLLVPASQAGSL 236
P PA + LL +H+RI L+SD++ + G +++T+L+V G L
Sbjct: 123 PSFSPAQEALLLIHERI---LESDAAFGVAEEDEEYGGRGGGRDRIATRLVVSRMHVGCL 179
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+GK G ++ ++ + +R+L + +LP + +V+VVG+ + V A+ +I S LR
Sbjct: 180 LGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGNVNAVKNALVIISSRLR 239
Query: 296 K 296
+
Sbjct: 240 E 240
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 155/354 (43%), Gaps = 50/354 (14%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + RML P+ K+G +IG+ G IK + + + A I++ D E ++I+ E P
Sbjct: 306 ELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSDL 365
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L + +I D D+ VS +LLVP+ G +IGK G + I+
Sbjct: 366 KSMAVEAVLLMQGKINDEDDT-----------TVSIRLLVPSKVIGCIIGKSGSIINEIR 414
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV---DRSIIP 305
+ + VR+ D P A +D +VEV G V A+ I LR ++ D P
Sbjct: 415 KRTKADVRI-SKGDKPKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRERDTGHNP 473
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
P +P PP P Y H +AES L P
Sbjct: 474 SIGAESLYPGSAGLSLPSMMHSVPPVAAPMV----YDH---------RAESGAGLGMLSP 520
Query: 366 PMEKQPHQGISAYGREAPV--NVHGSSNAQST--------PSMITQVTQQMQIPLSYADA 415
P+ G YG P+ N +GS ++ +T PS T M IP +
Sbjct: 521 ---SSPYGG---YG-SLPMGDNGYGSMSSYATKLYGGLPPPS-----TLDMLIPANAVGK 568
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
V+G GA+I+ IR+ SGA++ I + + G+ ISGT Q + A+ LIQ F+
Sbjct: 569 VLGKGGANIANIRKISGASIEISDNKSARGDRIALISGTPEQKRAAENLIQAFI 622
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 162/350 (46%), Gaps = 50/350 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA----KEEPE 186
V+R+L P + +GS+IG+ G+ I I +ETRA++K++D PG+ +R + I KE+ E
Sbjct: 38 VYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVE 97
Query: 187 SS--------LPPAMDGLLRVHKRIVDGL----DSDSSHAPSGTGGKVSTKLLVPASQAG 234
L A D LL+VH I + + DS+ + ++LVP+SQ+
Sbjct: 98 IDDEFAGKEPLCAAQDALLKVHVAIANSIAAIGDSEKKRKD-----RDECQILVPSSQSA 152
Query: 235 SLIGKQGGTVKSIQEASNCIVRVL---GAEDLPVFALQDDRVVEVVGDASGVHKAMELIG 291
++IGK G T+K ++ + ++V A+ A++ D V + G++ V +A+ +
Sbjct: 153 NIIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGESEAVKRALFAVS 212
Query: 292 SHLRKFLVDRSIIPLFEMHMQMPNPQM---DHIPPPQSWGPPQGLPPSGGPGYGHNPQYM 348
S + KF P ++ + P+ IP PP GL P+ P +
Sbjct: 213 SIMYKFG------PREDISLDTAVPEAPPSIIIPSDVPVYPPGGLYPASDP--------I 258
Query: 349 PPPRQAESYYPPADLPPPMEKQPHQGIS--AYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
PR ++ P ++ G S Y PV V G ++S +I +M
Sbjct: 259 VTPRAVPQIIGATNV-PDLQGYADAGNSWPMYSSALPV-VSGVGASRSEELII-----RM 311
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
P VIG G++I +R++SGA + + +++ E + I+ T S
Sbjct: 312 LCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTES 361
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K + G P S ML+PA VG ++G+ G I I + + A I+I D +R +IS
Sbjct: 546 KLYGGLPPPSTLDMLIPANAVGKVLGKGGANIANIRKISGASIEISDNKSARGDRIALIS 605
Query: 181 AKEE 184
E
Sbjct: 606 GTPE 609
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 159/355 (44%), Gaps = 22/355 (6%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF++L ++G +IG+ G ++ + E+ A + + G ER + I+A E ES
Sbjct: 305 VFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYS 364
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA ++ V R VD + + S G V +L+VP++Q G ++GK G + I++
Sbjct: 365 PAQKAVVLVFSRSVD-VAIEKWQESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKV 423
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ +R++ ++ +P A + D +V++ G+ S V A+ + LR L + +
Sbjct: 424 TGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFSSVL-----SN 478
Query: 311 MQMPNPQMDHIPPPQS-WGPPQGLPPS-----GGPGYGHNPQY--------MPPPRQAES 356
N + P S +G + P G +G Q+ + +S
Sbjct: 479 SGTRNGGGTSVYPETSPYGRVRDTAPLVRSTPVGTSHGSFMQHSTAQSSDDLGLSHSLDS 538
Query: 357 YYPPADLPP-PMEKQPHQGISAYGREAPVNVHGSS-NAQSTPSMITQVTQQMQIPLSYAD 414
P PP + + IS GR P + G + + +++T T ++ +P
Sbjct: 539 PSSPGLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGNKTAIVTNTTVEIVVPDDVIS 598
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
V G G +++ +R+ SGA V + E + + + ISGT + Q AQ L+ F+
Sbjct: 599 LVYGENGTNLTRLRQISGAKVIVHEPDPITSDRLIVISGTPDETQAAQSLLHAFI 653
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI------- 179
PG FRML A ++G +IG+ G IK++ + T +I++ + P + +R V +
Sbjct: 50 PGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALT 109
Query: 180 ----------SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVP 229
++ EE E+S A +GLL+V +RI++ G V +LL
Sbjct: 110 SRVFLEQNSGASGEEVEAS--KAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLAD 167
Query: 230 ASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMEL 289
+Q GS+IGK G V+ I++ S C +RVL + LP A D ++E+ GD + KA+
Sbjct: 168 VAQVGSVIGKGGKVVEKIRKESGCRIRVL-TDKLPACAGPSDEMIEIEGDVWAIKKALLA 226
Query: 290 IGSHLRKF--LVDRSIIPL-FEMHMQMPNPQMDHI 321
+ L+ R++ P +H +P+ MDHI
Sbjct: 227 VSRRLQDCPPSEKRTVRPAEAVIHETLPDLHMDHI 261
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 160/359 (44%), Gaps = 40/359 (11%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P + + VFR+L P KV ++G + + E +K+ D G+ E+ + I ++E
Sbjct: 346 PFYVEDLVFRILCPIDKVNRVVGESDGLVDLLQNEIGVDVKVADPVSGSDEQIITICSEE 405
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
P+ L PA + LL + RIVD L +D + ++T+LLVP+S+ G L G+ G+
Sbjct: 406 GPDDELFPAQEALLHIQTRIVD-LVADKDNI-------ITTRLLVPSSEIGCLEGRD-GS 456
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ ++ + + +L E LP + D +V++ G+ A+ + S LR +L
Sbjct: 457 LSEMESLTGATIEILPKEMLPTYLSGTDELVQIQGEVKAARDALVEVTSRLRSYLYK--- 513
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES-YYPPA- 361
+F+ + PP S P G +NP P R+ S PPA
Sbjct: 514 -DVFQKDL----------PPTVSAPGPAGTAGGLQAASSNNPT---PAREGHSGGDPPAT 559
Query: 362 --DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTP---------SMITQVTQQMQIPL 410
++ QP + E V + S + + P +++T+ ++ IP
Sbjct: 560 YQNVQSASTPQPSKDARGSSAET-VKQNESEHREDLPPPTMNRIPVTLVTRSILEVVIPE 618
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+I + ++ I SGA VT+ E R E ++ISGT Q + AQ L+Q F+
Sbjct: 619 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTEKIIQISGTPEQAERAQSLLQGFI 677
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 30/239 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPESSL 189
+R+L K G +IG+ G IK I + T A I + + PG ER + IS + +PE +
Sbjct: 88 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 147
Query: 190 P---PAMDGLLRVHKRIVDGLDSDSSHAPSGTGG------------KVSTKLLVPASQAG 234
P PA + L +H RI++ D SG GG +V+T+L+V G
Sbjct: 148 PSFSPAQEALFLIHDRILEN-DLQYGVVSSGAGGFEEDEYVGRGGNRVATRLVVSRMHVG 206
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDASGVHKAMELIGSH 293
L+GK G ++ ++ + +R+L + LP + +V+V+GD + V A+ +I S
Sbjct: 207 CLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSVSEEIVQVIGDVNAVKNAVAIISSR 266
Query: 294 LRKFL-VDRSIIPLFEMHMQMPNPQMD-----HIPPPQSW--GPPQGLPPSGGPGYGHN 344
LR+ DRS F +Q P +D H+ +S GPP GP Y +N
Sbjct: 267 LRESQHRDRS---HFHGRVQSPERFLDDDYVPHMNTRRSSMDGPPSFGSRLSGPNYRNN 322
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 36/355 (10%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P + + VFR+L P K+ ++G + + E +K+ D G+ E+ + I ++E
Sbjct: 320 PFYVEDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGVDVKVADPVSGSDEQIITIFSEE 379
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
P+ L PA + LL + RIVD L D+ H +T+LLV +S+ G L G+ +
Sbjct: 380 GPDDELFPAQEALLHIQTRIVD-LVPDNDHI-------TTTRLLVRSSEIGCLEGRD-AS 430
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ I+ + + +L E LP + D +V++ G+ A+ + S LR ++
Sbjct: 431 LSEIERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDALVEVTSRLRSYIYK--- 487
Query: 304 IPLFEMHMQMPNPQMDHIPPPQS---------WGPPQGLPPSGGPGYGHNPQYMPPPRQA 354
+FE + PPP S P P GP G P + A
Sbjct: 488 -DVFEKDL----------PPPVSAPGLAGGMQAASPSPTPAREGPIGGDPPASYQNVQSA 536
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
+ P D + Q S E PV ++ + +++T+ T ++ IP
Sbjct: 537 ATPQPSKDARGSSVEAVKQNESERREELPV----TTMNRIPVTLVTRSTLEVVIPEPAVP 592
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+I + ++ I SGA VT+ E R E ++ISGT Q + AQ L+Q F+
Sbjct: 593 KLITKSKNKLAQISELSGANVTLVEDRPDVKEKIIKISGTPEQAERAQSLLQGFI 647
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 19/183 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPESSL 189
+R+L K G +IG+ G IK I + T A I + + PG ER + IS + +PE +
Sbjct: 62 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 121
Query: 190 P---PAMDGLLRVHKRIVDGLDSDSSHAPSGTGG------------KVSTKLLVPASQAG 234
P PA + L +H RI++ D SG GG +V+T+L+V G
Sbjct: 122 PSFSPAQEALFLIHDRILEN-DLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMHVG 180
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDASGVHKAMELIGSH 293
L+GK G ++ ++ + +R+L + LP + +V+VVGD S V A+ +I S
Sbjct: 181 CLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIISSR 240
Query: 294 LRK 296
LR+
Sbjct: 241 LRE 243
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 157/353 (44%), Gaps = 48/353 (13%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E FR++ +VG++IG+ G ++ + E+ A I + +R V I+A E PES+
Sbjct: 112 EVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPEST 171
Query: 189 LPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PA ++ V + V+ GL+ S P V+ +L+VP++Q G L+GK G
Sbjct: 172 YSPAQKAVVLVFSKSVEAGVEKGLELGSKKEP-----YVTARLVVPSNQVGCLLGKGGAI 226
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
V +++A+ +RV+G + +P+ +D++V++ G S V A+ LR
Sbjct: 227 VSEMRKATGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLR-------- 278
Query: 304 IPLFEMHMQMPNPQMDHI-PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
DH+ Q+ G + L G P
Sbjct: 279 ---------------DHLFVSTQNSGGARSLSSVLAGG--------QPTLAISHSLNRHS 315
Query: 363 LPPPMEKQPHQGISAYG----REAPVNVHGSSN--AQSTPSMITQVTQQMQIPLSYADAV 416
LP Q GI++ G ++ G + S +++T T Q+ +P +V
Sbjct: 316 LPGLQAPQTVAGINSRGTNGVSRGLISRKGGLELISGSKTAIVTNTTVQIVVPDDVIGSV 375
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
G G++++ +R+ SGA V + E R + T+ ISGT + + AQ L+Q F+
Sbjct: 376 YGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQAFI 428
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 70/360 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI--SAKEEPESS 188
V+R+L P + +GS+IG+ G+ I I E+RAR+K++D PG R + I + KE+ ++
Sbjct: 37 VYRILCPDEVIGSVIGKSGKVINSIRNESRARVKVVDPFPGAMYRVITIYCNVKEKGDAD 96
Query: 189 ----------LPPAMDGLLRVHKRIVDGL----DSDSSHAPSGTGGKVSTKLLVPASQAG 234
L PA D LL+VH I + + DSD K ++LVP SQ+
Sbjct: 97 VDDDFHQADPLCPAQDALLKVHAAISNAVAALGDSDKR-----CRDKKECQILVPTSQSA 151
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLP----VFALQDDRVVEVVGDASGVHKAMELI 290
++IGK G T+K ++ + +++ A+D A+ D + + G++ V KA+ +
Sbjct: 152 NIIGKAGATIKKLRSKTRANIKIT-AKDASDPTHSCAMDFDNFLLITGESEAVKKALFAV 210
Query: 291 GSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPP 350
+ + KF P E+ ++ P+ PP + S P Y
Sbjct: 211 SAIMYKFS------PKEEIPLETTVPE----------APPSIIISSDVPIY--------- 245
Query: 351 PRQAESYYPPAD------LPPPMEKQPH----QGISAYGREAPVNVHGSSNAQSTPSM-- 398
Q +YP AD PP+ H QG P+ SS PS
Sbjct: 246 --QPGGFYPNADPIVSSRSVPPILGATHIPEFQGYGDMRSSWPIY---SSTVPVVPSFGN 300
Query: 399 --ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
+++ ++ P VIG G++I IR+ SGA + + +T+ E + + T S
Sbjct: 301 TSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIATES 360
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 149/350 (42%), Gaps = 43/350 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + R+L P K+G +IG+ G IK I + + ARI++ D E + + A E P+
Sbjct: 305 ELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIATESPDDL 364
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L + +I D D+D V + LVP+ G +IGK G V I+
Sbjct: 365 KSMAVEAILLLQGKINDE-DNDI----------VGIRFLVPSKVIGCIIGKSGAIVNEIR 413
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRS------ 302
+ +N V + + L A +D +VEV G+ V A+ I LR ++
Sbjct: 414 KRTNADVCISKVDKLKC-ADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKDGGLNS 472
Query: 303 ---IIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYP 359
++ +H + P + +P +PP GY + S
Sbjct: 473 SVGTDSVYPVHAGISIPSI--LP---------SVPPVAPMGYDQRAESGSGLGLFSSSSL 521
Query: 360 PADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGT 419
PM G ++YG A ++ PS T +M +P + VIG
Sbjct: 522 YGYGSLPM------GENSYGSLASYSLSKLYEGLPPPS-----TLEMLVPANAVGKVIGK 570
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
GA+I+ IR+ SGA + I + + G+ ISG Q Q A+ LIQ F+
Sbjct: 571 GGANIANIRKISGAMIEISDAKSARGDRIAYISGKPEQKQAAENLIQAFI 620
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 160/387 (41%), Gaps = 77/387 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA--------- 181
V+R+L P + +GS+IG+ G+ I I ++T A++K++D PG +R +++
Sbjct: 39 VYRILCPDKVIGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRDVML 98
Query: 182 ---------KEEPESSLPPAMDGLLRVHKRIVDGL----DSDSSHAPSGTGGKVSTKLLV 228
EP + A + LL+VH IV L DSD A +LV
Sbjct: 99 SDINADDDDDREP---VCAAQNALLKVHDAIVGALAVTDDSDDKEA----------NILV 145
Query: 229 PASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV---FALQDDRVVEVVGDASGVHK 285
PASQA S+IGK G +K ++ S ++V + V A+ D V++ GDA V K
Sbjct: 146 PASQAASVIGKSGSVIKKLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKK 205
Query: 286 AMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWG--PPQGLPPSGGPGYGH 343
A+ + + + K P ++IP S PP + PS P Y
Sbjct: 206 ALFAVSTIMYKC------------------PSKENIPLETSIDELPPTIILPSELPVYPA 247
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHG----------SSNAQ 393
+ Y S +P + + H P++ HG +
Sbjct: 248 SSLYSVSDASMPSGHPSLSILGATSRGSH----VPDFTVPIDTHGGLPIYQSMVPAVPTY 303
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
+TP ++ ++ P VIG AG +I IR+ SGA V + + + E + +S
Sbjct: 304 NTPKCSGELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITVSS 363
Query: 454 TASQVQTAQQLIQNFMAEAAAPSQAQM 480
T A +++ EA QA++
Sbjct: 364 TE-----ATDDVKSAAVEAVLLLQAKI 385
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P GE + R++ P K+G +IG+ G IK I +E+ AR+ + D E + +S+ E
Sbjct: 306 PKCSGELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITVSSTE 365
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+ A++ +L + +I D T ++ +LLVP + G LIGK G
Sbjct: 366 ATDDVKSAAVEAVLLLQAKIND-----------ETEDRMHLRLLVPGNVIGCLIGKGGSI 414
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ ++ S I+ + P A D +VEV G+ + A+ I LR+ ++ S+
Sbjct: 415 INDMRNKSKAIIHISKGTK-PRKASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDSV 473
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
+M IP S V+G G ++ IR+ SGA + I E++ + I GT Q Q+A+ L
Sbjct: 565 EMFIPSSGLSKVMGKHGTNLDNIRKISGADIEILESKSSRHDHVAHIFGTPEQWQSAENL 624
Query: 465 IQNFM 469
I+ F+
Sbjct: 625 IKAFI 629
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 53/370 (14%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
+ P + + VF++L P +KV S+IG I+ + + IK+ D G+ E+ ++
Sbjct: 323 NDNMMPFYGEDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILI 382
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
IS+ E P+ L PA + LL + RIVD L D + V+T+LLVP+S G L G
Sbjct: 383 ISSDEGPDDELFPAQEALLHIQTRIVD-LVPDKENI-------VTTRLLVPSSDIGCLEG 434
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
+ G ++ ++ + V ++ EDLP+F D +V+++GD A+ + S LR L
Sbjct: 435 RDGSLLE-MKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRNCL 493
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY 358
E + +PQ+ QS GL S + A + +
Sbjct: 494 YK-------EPFQKDASPQVS----VQSTMVSLGLEESSSNNNAAAREVHSGNDSASTAF 542
Query: 359 PPADLPPPMEKQPHQGISAYGREAPVN-VHGSSNAQST----------PSMITQV----- 402
Q + +G + GSSN T PS + ++
Sbjct: 543 --------------QNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLV 588
Query: 403 ---TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
T ++ IP +I + ++ I SGA VT+ E R + ++ISGT Q +
Sbjct: 589 TRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAE 648
Query: 460 TAQQLIQNFM 469
AQ L+Q F+
Sbjct: 649 RAQSLLQGFI 658
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 148/342 (43%), Gaps = 62/342 (18%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPES 187
+ +R+L K G +IG+ G IK I + T A I + + PG ER + IS + +PE
Sbjct: 60 TTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEG 119
Query: 188 SLP---PAMDGLLRVHKRIVDGLDSDSSHAPSGTG----------------------GKV 222
+P PA + L +H+RI L+S+ S +G G G+V
Sbjct: 120 RMPSFSPAQEALFLIHERI---LESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRV 176
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDAS 281
+T+L+V G L+GK G ++ ++ + +R+L + +LP + +V++VGD +
Sbjct: 177 ATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTN 236
Query: 282 GVHKAMELIGSHLRKFL-VDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
V KA+ ++ S LR+ DRS H ++ +P+ PP + P
Sbjct: 237 AVKKAIAIVSSRLRESQHRDRS-----HFHGRLHSPER-IFPPEDDYVP----------- 279
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVH-GSS--NAQSTPS 397
HN + +P + P M +G R++ V G++ N P
Sbjct: 280 --HNARRLPMDGRP--------FRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPF 329
Query: 398 MITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE 439
+ ++ P+ D+VIG + I +R G + + +
Sbjct: 330 YGEDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSD 371
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 162/360 (45%), Gaps = 41/360 (11%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
FR+L + KVG IIG+ G IK I +T IK+LD P + +R V IS P +
Sbjct: 415 TFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGIS 474
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA + +L V ++IV S++ P+ +L+V +Q G L+GK G + +++
Sbjct: 475 PAQNAILHVQRKIVP--TSNTKEGPA------ICRLIVSPNQVGCLLGKGGSIIAEMRKL 526
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV-DRSIIPLFEM 309
S + VL + +P ++D VV++ G + + +A+ I + LR L DR M
Sbjct: 527 SGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDR-------M 579
Query: 310 HMQMPNPQMDHIPPPQSWGPPQGL--PPSGGPGYGHN---PQYMPPPRQAESYYPPADLP 364
+PN Q PP GL P G H+ P+ P Q + L
Sbjct: 580 ASTVPNVQ-----------PPFGLVDPQFGSYAGNHDSISPRIFPNVPQFHKDFIGRPLD 628
Query: 365 PPMEKQPHQGISAYGR-----EAPVNVH---GSSNAQSTPSMITQVTQQMQIPLSYADAV 416
+G+ G + P H G PS+++ +T + +P ++
Sbjct: 629 EMSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPSIVSTITADVMVPKLVLPSL 688
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF-MAEAAAP 475
G G ++ IR SGA +T+ + G + + ISGT Q+ A+ LIQ F ++E AP
Sbjct: 689 CGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQMHAARSLIQAFVLSEPLAP 748
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQ 240
A+ E E +P A+ +L V RI + + SG VS +LLV SQ G L+GK
Sbjct: 234 AQLELEKGMPLAVKAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLGKN 293
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G +K + S C +RV + LP+ AL D + ++ G+ V K + + L
Sbjct: 294 GSVIKQMSTDSCCEIRV-SKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLL 346
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA 181
PG +FR+L P K G++IG+ G I KI +ET +I++ + PG ER ++I+A
Sbjct: 85 PGVPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 162/359 (45%), Gaps = 41/359 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
FR+L + KVG IIG+ G IK I +T IK+LD P + +R V IS P + P
Sbjct: 390 FRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISP 449
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A + +L V ++IV S++ P+ +L+V +Q G L+GK G + +++ S
Sbjct: 450 AQNAILHVQRKIVP--TSNTKEGPA------ICRLIVSPNQVGCLLGKGGSIIAEMRKLS 501
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV-DRSIIPLFEMH 310
+ VL + +P ++D VV++ G + + +A+ I + LR L DR M
Sbjct: 502 GAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDR-------MA 554
Query: 311 MQMPNPQMDHIPPPQSWGPPQGL--PPSGGPGYGHN---PQYMPPPRQAESYYPPADLPP 365
+PN Q PP GL P G H+ P+ P Q + L
Sbjct: 555 STVPNVQ-----------PPFGLVDPQFGSYAGNHDSISPRIFPNVPQFHKDFIGRPLDE 603
Query: 366 PMEKQPHQGISAYGR-----EAPVNVH---GSSNAQSTPSMITQVTQQMQIPLSYADAVI 417
+G+ G + P H G PS+++ +T + +P ++
Sbjct: 604 MSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPSIVSTITADVMVPKLVLPSLC 663
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF-MAEAAAP 475
G G ++ IR SGA +T+ + G + + ISGT Q+ A+ LIQ F ++E AP
Sbjct: 664 GEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQMHAARSLIQAFVLSEPLAP 722
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQ 240
A+ E E +P A+ +L V RI + + SG VS +LLV SQ G L+GK
Sbjct: 234 AQLELEKGMPLAVKAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLGKN 293
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G +K + S C +RV + LP+ AL D + ++ G+ V K + + L
Sbjct: 294 GSVIKQMSTDSCCEIRV-SKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLL 346
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA 181
PG +FR+L P K G++IG+ G I KI +ET +I++ + PG ER ++I+A
Sbjct: 85 PGVPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 157/352 (44%), Gaps = 44/352 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI--SAKEEPESS 188
V+R+L P VG +IG+ G+ I I T+A+IK+ D G ++R + I S KE+ E
Sbjct: 345 VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 404
Query: 189 ---------LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
L A D LL+V+ IV + +++ +LLVP SQ+ SLIGK
Sbjct: 405 GFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGK 464
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLP----VFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
G +K I+ + V+V+ ++D+ V A++ D VV + G+ V +A+ + + +
Sbjct: 465 AGENIKRIRRRTRASVKVV-SKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMY 523
Query: 296 KFLVDRSIIPLFEMHMQMPNPQM-------DHIPPPQSWGPPQGLPPSGGPGYGHNPQYM 348
K + R IPL +P + + + P + Q G G P Y
Sbjct: 524 K-INPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGV---PSYF 579
Query: 349 PPPRQAE--SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
++ Y A P P+ + PV HG + + ++ +V
Sbjct: 580 NALSVSDFQGYAETAANPVPV----------FASSLPVT-HGFGGSSRSEELVFKVL--- 625
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
PL VIG G++I IR +SG+ + + ++R G+ I TA+++
Sbjct: 626 -CPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATEI 676
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 35/183 (19%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG--PPGTTERAVMISAKE--- 183
E VF++L P + +IG+ G IK+I E + + I++ D G E ++++A E
Sbjct: 619 ELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATEILF 678
Query: 184 -----------EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQ 232
P+ A++ +L + + I D D+ + V +LLV +
Sbjct: 679 CCLSTPFVFMQSPDDMKSMAVEAVLLLQEYIN---DEDAEN--------VKMQLLVSSKV 727
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
G +IGK G + I++ +N ++ + + D +VEV G+ S V A+ I
Sbjct: 728 IGCVIGKSGSVINEIRKRTN--------ANICISKGKKDDLVEVSGEVSSVRDALIQIVL 779
Query: 293 HLR 295
LR
Sbjct: 780 RLR 782
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 167/359 (46%), Gaps = 61/359 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
E Q P P+ IP P S P + +GG Y QY +P
Sbjct: 168 ETLSQSP-PKGVTIPYRPKPSSSP---VIFAGGQAYTIQGQY--------------AIPQ 209
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
P + HQ ++ P+ HG++ ++ TQ T ++ IP + +IG GA+I+
Sbjct: 210 PDLTKLHQ-LAMQQSHFPMT-HGNTGFSASLDASTQTTHELTIPNNLIGCIIGRQGANIN 267
Query: 426 YIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGAS 483
IR+ SGA + I G G V I+G+A+ + AQ LI A S+ MG S
Sbjct: 268 EIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI-----NARLSSEKGMGCS 320
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 44/351 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI--SAKEEPESS 188
V+R+L P VG +IG+ G+ I I T+A+IK+ D G ++R + I S KE+ E
Sbjct: 37 VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96
Query: 189 ---------LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
L A D LL+V+ IV + +++ +LLVP SQ+ SLIGK
Sbjct: 97 GFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGK 156
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLP----VFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
G +K I+ + V+V+ ++D+ V A++ D VV + G+ V +A+ + + +
Sbjct: 157 AGENIKRIRRRTRASVKVV-SKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMY 215
Query: 296 KFLVDRSIIPLFEMHMQMPNPQM-------DHIPPPQSWGPPQGLPPSGGPGYGHNPQYM 348
K + R IPL +P + + + P + Q G G P Y
Sbjct: 216 K-INPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGV---PSYF 271
Query: 349 PPPRQAE--SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
++ Y A P P+ + PV HG + + ++ +V
Sbjct: 272 NALSVSDFQGYAETAANPVPV----------FASSLPV-THGFGGSSRSEELVFKVL--- 317
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQ 457
PL VIG G++I IR +SG+ + + ++R G+ I TA++
Sbjct: 318 -CPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATE 367
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 21/169 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG--PPGTTERAVMISAKEEPE 186
E VF++L P + +IG+ G IK+I E + + I++ D G E ++++A E P+
Sbjct: 311 ELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPD 370
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
A++ +L + + I D D+ + V +LLV + G +IGK G +
Sbjct: 371 DMKSMAVEAVLLLQEYIN---DEDAEN--------VKMQLLVSSKVIGCVIGKSGSVINE 419
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
I++ +N ++ + + D +VEV G+ S V A+ I LR
Sbjct: 420 IRKRTN--------ANICISKGKKDDLVEVSGEVSSVRDALIQIVLRLR 460
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 35/329 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK-------- 182
V+R+L P+ +GS+IG+ G+ I I +ETRARIK++D PG +ER + I
Sbjct: 45 VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIV 104
Query: 183 ----EEPESSLP--PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
E + S+P A LL+VH IV L + + + +LLVP+SQ +
Sbjct: 105 DIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIV 164
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLP----VFALQDDRVVEVVGDASGVHKAMELIGS 292
IGK G +K+I+ + V+V+ ++D+ A+ D +V + G+ V KA+ + +
Sbjct: 165 IGKSGSIIKNIRGRTRANVKVV-SKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 293 HLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPR 352
+ K + R IPL ++P + IP S P GL PS + H
Sbjct: 224 IMYK-VSPREQIPLDTTVQEVPASII--IPSDLSIYPQAGLYPSQDSIFQHGA------- 273
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
S+ LP + + + A VHG + + + +V S
Sbjct: 274 NVSSFI--GTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICSS----SK 327
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETR 441
VIG G +I IR++SG+ + + ++R
Sbjct: 328 IGRVIGKGGLTIKGIRQASGSHIEVNDSR 356
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 153/359 (42%), Gaps = 38/359 (10%)
Query: 125 GWPGES-----VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM- 178
G+ G S +++ + K+G +IG+ G IK I + + + I++ D + V+
Sbjct: 307 GFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVIT 366
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
++A E P+ A++ +L + ++I D D D KV +LLV + G +IG
Sbjct: 367 VTATESPDDLKSMAVEAVLLLQEKINDE-DED----------KVKMQLLVSSKVIGCIIG 415
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KF 297
K G + I++ + + + + P A +D +VE+ G+ S V A+ I LR
Sbjct: 416 KSGSIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDV 475
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES- 356
L DR + PP +S S G +M Q S
Sbjct: 476 LRDR-------------ETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASV 522
Query: 357 -YYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPSMI----TQVTQQMQIPL 410
+ + M P GI YG N SN+ + ++ T +++IP
Sbjct: 523 DFNRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPA 582
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ V+G G ++ IRR SGA + I +++ G ISGT+ Q +TA+ L Q F+
Sbjct: 583 NAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRTAENLFQAFI 641
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 154/357 (43%), Gaps = 59/357 (16%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P + + VFRML PA KV ++G + + + +K+ D G+ E+ ++IS++E
Sbjct: 338 PFYGDDLVFRMLCPADKVNKVVGESDGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEE 397
Query: 184 EPESSLPPAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGG 242
P+ L PA + LL + I+D + DSD+ + TKL+V + + G L G+ G
Sbjct: 398 GPDDELFPAQEALLHIQTHIIDLVPDSDNI---------IKTKLIVSSGEIGCLEGRD-G 447
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRS 302
++ ++ + +++L E LP + D +V++ G+ A+ + S LR +
Sbjct: 448 SLSEMERLTGAKIQILPREKLPACVSEADELVQIEGEIKAARDALVEVTSRLRSY----- 502
Query: 303 IIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGP--GYGHNPQYMPPPRQAESYYPP 360
L++ + Q P PP +P +G +P + PPR S P
Sbjct: 503 ---LYKEYFQKDTP------------PPISVPSTGNALGMEAASPNNINPPRDGHSGGEP 547
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL--SYADAVIG 418
P P AP+ + ++ + ++ + SY ++
Sbjct: 548 ---PAANYHTPKTA-------APIQL-----SKVIILWLCRIFFLLHFSFSRSYVQLLLS 592
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAP 475
T SGA VT+ E R E ++ISGT QV+ AQ L+Q F+ + P
Sbjct: 593 TV---------LSGANVTLLEDRPEVTEKIIQISGTPEQVERAQSLLQGFILSSNRP 640
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPESSL 189
+R+L K G +IG+ G IK I + T A I + + PG ER + IS + +PE +
Sbjct: 77 YRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 136
Query: 190 P---PAMDGLLRVHKRIVD-----GL------DSDSSHAPSGTGGKVSTKLLVPASQAGS 235
P PA + L +H RI++ G+ D + + +V+T+L+V G
Sbjct: 137 PAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGGRGINNSNNRVATRLVVSRMHVGC 196
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
L+GK G ++ ++ + +R+L + LP + +V+VVGD + V A+ +I S L
Sbjct: 197 LLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVNAVKNAIAIISSRL 256
Query: 295 RK 296
R+
Sbjct: 257 RE 258
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 35/329 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK-------- 182
V+R+L P+ +GS+IG+ G+ I I +ETRARIK++D PG +ER + I
Sbjct: 45 VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIV 104
Query: 183 ----EEPESSLP--PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
E + S+P A LL+VH IV L + + + +LLVP+SQ +
Sbjct: 105 DIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIV 164
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLP----VFALQDDRVVEVVGDASGVHKAMELIGS 292
IGK G +K+I+ + V+V+ ++D+ A+ D +V + G+ V KA+ + +
Sbjct: 165 IGKSGSIIKNIRGRTRANVKVV-SKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 293 HLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPR 352
+ K + R IPL ++P + IP S P GL PS + H
Sbjct: 224 IMYK-VSPREQIPLDTTVQEVPASII--IPSDLSIYPQAGLYPSQDSIFQHGA------- 273
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
S+ LP + + + A VHG + + + +V S
Sbjct: 274 NVSSFI--GTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICSS----SK 327
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETR 441
VIG G +I IR++SG+ + + ++R
Sbjct: 328 IGRVIGKGGLTIKGIRQASGSHIEVNDSR 356
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 125 GWPGES-----VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM- 178
G+ G S +++ + K+G +IG+ G IK I + + + I++ D + V+
Sbjct: 307 GFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVIT 366
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
++A E P+ A++ +L + ++I D D D KV +LLV + G +IG
Sbjct: 367 VTATESPDDLKSMAVEAVLLLQEKINDE-DED----------KVKMQLLVSSKVIGCIIG 415
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KF 297
K G + I++ + + + + P A +D +VE+ G+ S V A+ I LR
Sbjct: 416 KSGSIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDV 475
Query: 298 LVDR 301
L DR
Sbjct: 476 LRDR 479
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 162/359 (45%), Gaps = 41/359 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
FR+L + KVG IIG+ G IK I +T IK+LD P + +R V IS P + P
Sbjct: 117 FRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISP 176
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A + +L V ++IV S++ P+ +L+V +Q G L+GK G + +++ S
Sbjct: 177 AQNAILHVQRKIVP--TSNTKEGPA------ICRLIVSPNQVGCLLGKGGSIIAEMRKLS 228
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV-DRSIIPLFEMH 310
+ VL + +P ++D VV++ G + + +A+ I + LR L DR M
Sbjct: 229 GAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDR-------MA 281
Query: 311 MQMPNPQMDHIPPPQSWGPPQGL--PPSGGPGYGHN---PQYMPPPRQAESYYPPADLPP 365
+PN Q PP GL P G H+ P+ P Q + L
Sbjct: 282 STVPNVQ-----------PPFGLVDPQFGSYAGNHDSISPRIFPNVPQFHKDFIGRPLDE 330
Query: 366 PMEKQPHQGISAYGR-----EAPVNVH---GSSNAQSTPSMITQVTQQMQIPLSYADAVI 417
+G+ G + P H G PS+++ +T + +P ++
Sbjct: 331 MSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPSIVSTITADVMVPKLVLPSLC 390
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF-MAEAAAP 475
G G ++ IR SGA +T+ + G + + ISGT Q+ A+ LIQ F ++E AP
Sbjct: 391 GEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQMHAARSLIQAFVLSEPLAP 449
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 96/170 (56%), Gaps = 7/170 (4%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTER--AVMISAKEEP 185
G VFR+L A ++G+ IG+ G IK + + T ARI+I D P ER V+++ +
Sbjct: 18 GHVVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNGDG 77
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTV 244
+ SL P + LL+V +RI+D ++S +G G + VS +LLV A QAG +IGK G V
Sbjct: 78 DVSLNP-QEALLKVFERILDVAAAESDG--NGVGDRVVSCRLLVNAGQAGGVIGKGGMVV 134
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
I+ + C +RVL + LP D ++E+ G AS V KA+ + L
Sbjct: 135 AKIRADTGCRIRVLN-DKLPACTKPSDEIIEIQGIASSVKKALVAVAGRL 183
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 32/365 (8%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP--GTTERAVMISAKEEPE 186
E FR+L ++G+++G+ G +K + ET A I + GPP +R + I+A E PE
Sbjct: 265 EVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISV--GPPVVECEDRLITITALENPE 322
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S PA + ++ V R ++ S V+ +L+VP++Q G L+GK G V
Sbjct: 323 SRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLVVPSNQVGVLLGKGGAIVSE 382
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
+++A+ +R+ ++P A +D+VV++ G+ V A+ LR I L
Sbjct: 383 MRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNATRRLRDH------IFL 436
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ---------YMPPPRQAESY 357
+ P + P S P GL G H P ++ R +
Sbjct: 437 IAQNSGGTGP---YRRPRDSI--PLGLGGQSVVGSNHGPSIHSLSQSMDHLTLSRNSGRS 491
Query: 358 YPPADLPPPM------EKQPHQGISAYGREAPVNV-HGSSNAQSTPSMITQVTQQMQIPL 410
P + G RE + + GS+ ++IT T ++ +P
Sbjct: 492 ASSGVWAPKVVGGKNSRYTDDAGRRLNPREGDLELASGSNTVIGNAAIITNTTVEIMLPN 551
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETR-GVPGEMTVEISGTASQVQTAQQLIQNFM 469
+V G G+++ +R+ SGA V E R G + +SGT + Q AQ L+Q ++
Sbjct: 552 DIIGSVYGENGSNLDQLRQISGAKVVFHEPRPGTSDRAKIVLSGTPDETQAAQSLLQAYI 611
Query: 470 AEAAA 474
++
Sbjct: 612 LNGSS 616
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 153/360 (42%), Gaps = 41/360 (11%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT-TERA 176
++ + G E VFR+L GS+IG++G ++ + +T A I I P ER
Sbjct: 270 TSNRDSKGAEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASI-IFAAPLSEHAERI 328
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
V ISA E ES PA D ++ V RI++ S V+ +LLV S
Sbjct: 329 VTISAVESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNCF 388
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
G +G + ++E + +++L E +P A +D VV++ G+ V A+ I S +R
Sbjct: 389 SGNEGQVISELREVTGADIQILHGESVPNGASDEDVVVQITGEYRCVQNALYKITSRIRD 448
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWG----PPQGLPPSGGPGYGHNPQYMPPPR 352
L PN + P +W P +G P + G + +++P
Sbjct: 449 NL--------------SPNEVVAEARPKSNWKVNKDPIKGKPFARGKSAFPSGRFLPRNA 494
Query: 353 --QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
AE+ +L + + +G N +T +T T ++ +
Sbjct: 495 GVHAETILQNGELHTDLSENLERG--------------RGNMFAT---VTNTTVEIIVSE 537
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+V G G ++ IR+ SGA VT+ + + G G V ISGT Q AQ L+Q F+
Sbjct: 538 HVFGSVYGEDGGNLDRIRQISGAIVTVYDPSVGTSGGKVV-ISGTPDQTFAAQSLLQAFI 596
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 13/191 (6%)
Query: 107 KQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 166
K+ N S + PG+ FR++ A VG +IG G + ++ ET +I
Sbjct: 18 KRSNTTTTNRSSKRPVFKVLPGQIAFRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCE 77
Query: 167 DGPPGTTERAVMISAKEEPESSL----------PPAMDGLLRVHKRIVDGLDSDSSHAPS 216
D +R +++ P L A + ++RV +R+ D ++
Sbjct: 78 DSLSSAEDRVILVIGSLSPRKGLLLGDGGEVEVSSAQEAVVRVFERVWDLEAEKGVNSNR 137
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
G+V +KLL SQ G+++GK G + +I+ + +RV P A +D+ +V++
Sbjct: 138 AVNGEVFSKLLAHTSQIGAVVGKGGKNITAIRNNTGAKIRVFPP---PQCATKDEELVQI 194
Query: 277 VGDASGVHKAM 287
G V KA+
Sbjct: 195 TGGILAVKKAL 205
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 160/360 (44%), Gaps = 57/360 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KG+ IKK EE+ A+I I DG ER V ++ E ++
Sbjct: 76 VRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDG--SCPERIVTVTGSTE---AILK 130
Query: 192 AMDGLLRVHKRIVDGL--------------DSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
A + R + ++ L S+ SH P V+ +L+VPASQ GSLI
Sbjct: 131 AFSLIARKFEEMLSLLCLPVQTVGPTLQELQSNGSHLPKP---PVTLRLIVPASQCGSLI 187
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
GK G +K I+E + ++V +E LP +R V V G A + K + I
Sbjct: 188 GKGGSKIKEIREVTGASIQV-ASEMLPN---STERAVTVSGTAEAITKCIYQICC----- 238
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQYMPPPRQA 354
+ M+ P P+ IP + P +PP +GG Y QY P
Sbjct: 239 -----------VMMESP-PKGATIP----YRPKPAMPPVIFAGGQAYTVQGQYAIPHPDL 282
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQ-----STPSMITQVTQQMQIP 409
+ A P+ P + A +A + ++N + + + + T +M IP
Sbjct: 283 TKLHQLALQHAPL--LPGHSVGAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIP 340
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+IG G+ I+ IR+ SGAT+ I + + TV ISGT + AQ LI M
Sbjct: 341 NDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLINTSM 400
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAM 193
M +P +G IIG+ G I +I + + A IKI + G+ +R V IS E + +
Sbjct: 337 MTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLI 396
Query: 194 DGLLRVHKRIVDGLDSDSSHAPSG 217
+ + +HK + LD ++H SG
Sbjct: 397 NTSMELHKNLT--LDLSATHPASG 418
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 23/125 (18%)
Query: 207 LDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
+D+ + PS T ++ +L++ + GS+IGK+G +K +E S + +
Sbjct: 62 VDTKALDGPSVT---LTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSC---- 114
Query: 267 ALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQM-------D 319
+R+V V G + KA LI RKF ++ L + +Q P +
Sbjct: 115 ---PERIVTVTGSTEAILKAFSLIA---RKF---EEMLSLLCLPVQTVGPTLQELQSNGS 165
Query: 320 HIPPP 324
H+P P
Sbjct: 166 HLPKP 170
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 44/351 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI--SAKEEPESS 188
V+R+L P VG +IG+ G+ I I T+A+IK+ D G ++R + I S KE+ E
Sbjct: 37 VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96
Query: 189 ---------LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
L A D LL+V+ IV + +++ +LLVP SQ+ SLIGK
Sbjct: 97 GFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGK 156
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLP----VFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
G +K I+ + V+V+ ++D+ V A++ D VV + G+ V +A+ + + +
Sbjct: 157 AGENIKRIRRRTRASVKVV-SKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMY 215
Query: 296 KFLVDRSIIPLFEMHMQMPNPQM-------DHIPPPQSWGPPQGLPPSGGPGYGHNPQYM 348
K + R IPL +P + + + P + Q G G P Y
Sbjct: 216 K-INPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGV---PSYF 271
Query: 349 PPPRQAE--SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
++ Y A P P+ + PV HG + + ++ +V
Sbjct: 272 NALSVSDFQGYAETAANPVPV----------FASSLPVT-HGFGGSSRSEELVFKVL--- 317
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQ 457
PL VIG G++I IR +SG+ + + ++R G+ I TA++
Sbjct: 318 -CPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATE 367
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 145/344 (42%), Gaps = 54/344 (15%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG--PPGTTERAVMISAKEEPE 186
E VF++L P + +IG+ G IK+I E + + I++ D G E ++++A E P+
Sbjct: 311 ELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPD 370
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
A++ +L + + I D D+ + V +LLV + G +IGK G +
Sbjct: 371 DMKSMAVEAVLLLQEYIN---DEDAEN--------VKMQLLVSSKVIGCVIGKSGSVINE 419
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-FLVDRSIIP 305
I++ +N ++ + + D +VEV G+ S V A+ I LR+ L D+ +
Sbjct: 420 IRKRTN--------ANICISKGKKDDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVA 471
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
+ PP L S GY P +M ++ P
Sbjct: 472 TRK--------------PPARTDNCSFLSGSSNAGYTL-PSFMSSMASTSGFHGYGSFP- 515
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
A NV GS+ S + + ++ IP V+G G ++
Sbjct: 516 ----------------AGDNVLGSTGPYSYGRLPSSSALEILIPAHAMSKVMGKGGGNLE 559
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
IRR SGA + I ++ G+ +SGT Q++ A+ L+Q F+
Sbjct: 560 NIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAFV 603
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 154/365 (42%), Gaps = 61/365 (16%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P GE V R+L PA K+G +IG+ G IK I +E+ ARI + D E + I++ E
Sbjct: 116 PKCSGELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNE 175
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+ + A++ +L + +I D D++ GK++ +LLVP G LIGK G
Sbjct: 176 ATDDAKSAAVEAVLLLQSKIND--DNE---------GKMNLRLLVPGKVIGCLIGKGGSI 224
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
V ++ + + + E P A D +VEV G+ + A+ I LR ++ S+
Sbjct: 225 VNDMRSKTKAAIYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSV 283
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
N + D G P A SY PA L
Sbjct: 284 --------DRQNSEKD----------------------GKLTVATTDPLYASSYPLPALL 313
Query: 364 PPPMEKQP----HQGISAYGREA--PVNVHGSSNAQSTPSMITQVT-------------Q 404
P + P H+G G E +++G S+ Q+ + V+
Sbjct: 314 PYRQQITPLGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHM 373
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
+M IP S V+G G ++ I + SGA + I E++ ISGT Q Q+A+ L
Sbjct: 374 EMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENL 433
Query: 465 IQNFM 469
I+ F+
Sbjct: 434 IKAFI 438
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 147/328 (44%), Gaps = 33/328 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK-------- 182
V+R+L P+ +GS+IG+ G+ I I +ETRARIK++D PG +ER + I
Sbjct: 45 VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIV 104
Query: 183 ----EEPESSLP--PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
E + S+P A LL+VH IV L + + + +LLVP+SQ +
Sbjct: 105 DIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIV 164
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLP---VFALQDDRVVEVVGDASGVHKAMELIGSH 293
IGK G +K+I+ + V+V+ + A+ D +V + G+ V KA+ + +
Sbjct: 165 IGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNIVMISGETESVKKALFAVSAI 224
Query: 294 LRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQ 353
+ K + R IPL ++P + IP S P GL PS + H
Sbjct: 225 MYK-VSPREQIPLDTTVQEVPASII--IPSDLSIYPQAGLYPSQDSIFQHGA-------N 274
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
S+ LP + + + A VHG + + + +V S
Sbjct: 275 VSSFI--GTLPQGYGENAANPLPVFSASALPVVHGFGGSSRSEKLAIKVI----CASSKI 328
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETR 441
VIG G +I IR++SG+ + + ++R
Sbjct: 329 GRVIGKGGLTIKGIRQASGSHIEVNDSR 356
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 153/359 (42%), Gaps = 38/359 (10%)
Query: 125 GWPGES-----VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM- 178
G+ G S +++ + K+G +IG+ G IK I + + + I++ D + V+
Sbjct: 307 GFGGSSRSEKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVIT 366
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
++A E P+ A++ +L + ++I D D D KV +LLV + G +IG
Sbjct: 367 VTATESPDDLKSMAVEAVLLLQEKINDE-DED----------KVKMQLLVSSKVIGCIIG 415
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KF 297
K G + I++ + + + + P A +D +VE+ G+ S V A+ I LR
Sbjct: 416 KSGSIISEIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDV 475
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES- 356
L DR + PP +S S G +M Q S
Sbjct: 476 LRDR-------------ETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASV 522
Query: 357 -YYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPSMI----TQVTQQMQIPL 410
+ + M P GI YG N SN+ + ++ T +++IP
Sbjct: 523 DFDRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPA 582
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ V+G G ++ IRR SGA + I +++ G ISGT+ Q +TA+ L Q F+
Sbjct: 583 NAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRTAENLFQAFI 641
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA-KEEPESSLP 190
FR+L A +VG+IIG+ G IK + E T A+I+I D PP + +R +++SA + +
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPAAASDGEVS 86
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQE 249
A LL+V R+ LD + A + G + VS +LL SQ G++IGK G V+ I+
Sbjct: 87 TAQVALLKVFDRV---LDVAAETAGTEVGDRVVSCRLLADTSQVGAVIGKAGKVVEKIRM 143
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+ C +RVL E LP D +VEV G + V KA+ + L
Sbjct: 144 DTGCKIRVLN-EGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCL 187
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 160/356 (44%), Gaps = 53/356 (14%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE-PES 187
E FR++ +VG++IG+ G ++ + E+ A I +R V I+A E+ PES
Sbjct: 269 EVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTITASEQNPES 328
Query: 188 SLPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGG 242
PA ++ V + V+ GLD S V+ +L+VP++Q G L+GK G
Sbjct: 329 RYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKES-----YVTAQLVVPSNQVGCLLGKGGA 383
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRS 302
V +++A+ +RV+G + +P +D++V++ G+ S V A+ LR L
Sbjct: 384 IVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGRLRDNL---- 439
Query: 303 IIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--SGGP-----GYGHNPQYMPPPRQAE 355
Q+ G + L SGG N +P + +
Sbjct: 440 ------------------FVSTQNSGGARSLSSVLSGGKPTVAVSLSLNRHSLPGLQAPQ 481
Query: 356 SYYPPADLPPPMEKQPHQGISAY--GREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+ A + + +G+++ G E V GS A ++T T Q+ +P
Sbjct: 482 TV---AGINSRVTNGVSRGLTSQKGGLEL---VSGSKTA-----IVTNTTVQIAVPDDVI 530
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+V G G++++ +R+ SGA V + E R + T+ ISGT + + AQ L+Q F+
Sbjct: 531 GSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQAFI 586
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 21/186 (11%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
++V+R L P +K+GSIIGR GE K++ E+++ I+I + G ER V I + E ES+
Sbjct: 49 DTVYRYLCPLRKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSNSE-ESN 107
Query: 189 L--------PPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK------------VSTKLLV 228
L PA D L VH RI+ ++S++ + V+ ++LV
Sbjct: 108 LFGDSGEFVCPAQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRMLV 167
Query: 229 PASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAME 288
PA Q G +IGK G ++SI+ + +R+L E LP AL D ++ ++G+ + V KA+
Sbjct: 168 PADQIGCVIGKGGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAVVRKALY 227
Query: 289 LIGSHL 294
+ + L
Sbjct: 228 QVATRL 233
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 157 EETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS 216
+E+RA IK+ + + ISAKE E + LR+ R + + DS +
Sbjct: 324 QESRASIKVDSSAAEGDDCIIFISAKEFFEDQ-SATLTAALRLQPRCSEKTERDSGDSV- 381
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
++T+LLVP SQ G L+GK G + ++ + +R+L ++LP A +DD +V++
Sbjct: 382 -----ITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNLPKVASEDDEMVQI 436
Query: 277 VGDASGVHKAMELIGSHLRKFLVDR 301
G A+ + L+ L R
Sbjct: 437 TGSHDVASNALLHVVLRLKANLFGR 461
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 170/361 (47%), Gaps = 35/361 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ AR+ I +G ER + I+
Sbjct: 18 LRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITG---------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD-SSHAPSGTGGK---VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ D + R I L+ D ++ +GT V+ +L++PASQ GSLIGK G +K I
Sbjct: 66 STDSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEI 125
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ ++V G + LP +R V + G+ V + ++LI + + + + IP
Sbjct: 126 RESTGAQIQVAG-DLLPN---STERGVTISGNQDSVIQCVKLICTVILESPPKGATIP-- 179
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLP-PSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
+ P+P I Q + + P P G Q + P ++L
Sbjct: 180 --YRPSPSPAALLIAGNQVFEASEFAPHPLYSVAQGGLDLQQAYTLQNQYGIPHSELAKL 237
Query: 367 MEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
+ QG+S + A + G SN+Q++ Q++ IP ++IG G I+
Sbjct: 238 HQLSVQQGLSPIAQPASAVIPGMDSNSQTS--------QELLIPNDLIGSIIGRQGTKIN 289
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQ-AQMGASA 484
IR+ SGA + I + V I+GT + AQ LI + + A + +Q A MG+
Sbjct: 290 EIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAKSTAQAASMGSPV 349
Query: 485 D 485
D
Sbjct: 350 D 350
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 207 LDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
++ + G G ++ +LL+ + GS+IGK+G TVK I+E S+ V + P
Sbjct: 1 MNCEQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNI-SEGSCP-- 57
Query: 267 ALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
+R++ + G V +A +I L + L
Sbjct: 58 ----ERIITITGSTDSVFRAFTMITYKLEEDL 85
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 163/369 (44%), Gaps = 71/369 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMPNPQMDHIP-------PPQ---SWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY 357
E+ Q P P++ IP PQ S G P P NP PP +A +
Sbjct: 168 EVSPQAP-PKLQCIPWRLKSSIYPQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTI 226
Query: 358 YPPADLPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNAQSTPS 397
+P P + HQ G S +P V G ++AQ+T
Sbjct: 227 QGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWAGLDASAQTT-- 283
Query: 398 MITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQ 457
+ ++ IP +IG GA I+ IR+ SGA + I + V I+G+A+
Sbjct: 284 -----SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAAS 338
Query: 458 VQTAQQLIQ 466
+ AQ LI
Sbjct: 339 ISLAQYLIN 347
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 152/344 (44%), Gaps = 64/344 (18%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
FR+L ++VG IIG+ G IK + ET IK+LDG P + +R + IS P+ +
Sbjct: 336 TFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRIS 395
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA D +LRV RIV + P V +LLV ++Q G L+GK G + +++
Sbjct: 396 PAQDAVLRVQSRIVRAI-------PDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKL 448
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR------KFLVDRSII 304
S +R+LG + +P A +++ VV++ G+ V +A+ I + LR F V+
Sbjct: 449 SGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRHHHFRDAFSVNHPSN 508
Query: 305 PLFEMHMQMPNPQMDHIPP------PQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY 358
P F D +PP + + PP G+ + GP + H + ++
Sbjct: 509 PAF----------TDQVPPFPPYLARREFSPP-GMYSNLGPSF-HKFDAVGVLHPHGGFH 556
Query: 359 PPADLPPPM-------------EKQP------HQGI-----------SAYGREAPVNVHG 388
P D P M E++P HQG+ A G + + G
Sbjct: 557 PHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGHQGLIEGGVPIGLADFAGGPQRRIPGFG 616
Query: 389 SSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSG 432
N Q ++IT T ++ +P S ++ G G + IR+ G
Sbjct: 617 GGNQQ---AIITSTTVEVVVPRSLVPSIYGEDGGCLRQIRQEVG 657
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 61/268 (22%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE--- 183
PG VFR+L PA K GS+IG+ G I +I +ET ++++ + G ER V+I+ +
Sbjct: 42 PGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDT 101
Query: 184 ------------------------EP-----------------ESSLPPAMDGLLRVHKR 202
EP E + LL V +R
Sbjct: 102 EADNEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFER 161
Query: 203 I------VDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVR 256
+ +G D DS+ +P+ +LLV +SQ G L+GK G +K + S +R
Sbjct: 162 MAEGESETNGGDEDSNKSPT-----FVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIR 216
Query: 257 VLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL-----RKFLVDRSIIPLFEMHM 311
+L + LP+ A D +V++ G+ +A++ I L R + + + H+
Sbjct: 217 ILPRDKLPLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHL 276
Query: 312 QM-PNPQMDHIPPPQSWGPPQGLPPSGG 338
P P+ + PPP P QG P + G
Sbjct: 277 FGPPLPRSEAQPPPNYSFPAQGAPYAAG 304
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 163/386 (42%), Gaps = 73/386 (18%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA--------- 181
V+R+L P + +GS+IG+ G+ I I ++T A++K++D PG +R +++
Sbjct: 40 VYRILCPDKVIGSVIGKNGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCHVHHRDLTH 99
Query: 182 ---------KEEPESSLPPAMDGLLRVHKRIVDGL----DSDSSHAPSGTGGKVSTKLLV 228
EP + A + LL+VH IV+ L DSD A +LV
Sbjct: 100 RDIDVDDDDDREP---VCAAQNALLKVHDAIVEALAINSDSDDEEA----------NILV 146
Query: 229 PASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV---FALQDDRVVEVVGDASGVHK 285
PASQA S+IGK G +K ++ S ++V + V A+ D V++ GDA V K
Sbjct: 147 PASQAASVIGKSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQITGDARAVKK 206
Query: 286 AMELIGSHLRKFLVDRSIIPLFEMHMQMP-----NPQMDHIPPPQSWGPPQGLPPSGGP- 339
A+ + + + K + IIPL ++P ++ P + G PSG P
Sbjct: 207 ALFAVSAIIYKS-PSKEIIPLETSVQELPPSIIIPSELPVYPASNFYSLSDGAMPSGHPS 265
Query: 340 ----GYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQST 395
G H+ +P + PAD H + Y P + ST
Sbjct: 266 LPILGAPHHVSRIP------EFTVPAD--------AHGRLPIYQSMVP-----AIPTYST 306
Query: 396 PSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA 455
P + ++ P VIG G +I IR+ SGA + + + + E + ++ T
Sbjct: 307 PKGSGDLLLRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTST- 365
Query: 456 SQVQTAQQLIQNFMAEAAAPSQAQMG 481
A +++ EA QA++
Sbjct: 366 ----EATDDVKSAAVEAVLLLQAKIN 387
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 153/355 (43%), Gaps = 41/355 (11%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P G+ + R++ P K+G +IG+ G IK I +E+ A I + D E + +++ E
Sbjct: 307 PKGSGDLLLRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTSTE 366
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+ A++ +L + +I DG++ ++ +LLVP + G LIGK G
Sbjct: 367 ATDDVKSAAVEAVLLLQAKINDGIED-----------RMHIRLLVPGNVIGCLIGKGGSI 415
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
V ++ S I+ + P A D +VEV G+ + A+ I LR+ ++ S+
Sbjct: 416 VNDMRNKSKAIIHISKGSK-PRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDSV 474
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN---PQYMPPPRQAE--SYY 358
+ N D ++ + P Y N P +P RQ SY
Sbjct: 475 --------ERQNSDKD---GKRTIAITE-------PMYSSNFSMPALLPSTRQVSPLSYD 516
Query: 359 PPADLPPPMEKQPHQGISAYGREAPVN----VHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
++ ++ P Y V+ H S ++S + +M IP S
Sbjct: 517 QRGEVERGLDVYPRSSSYRYSSLQAVDDGYGAHSSYTSKSYGGRRPDI--EMIIPASGLS 574
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
VIG G ++ IR+ SGA + I E++ + ISGT Q Q+A+ LI+ F+
Sbjct: 575 KVIGKRGTNLDNIRKISGADIEIIESKSSRHDHVAHISGTPEQRQSAENLIRAFI 629
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 170/385 (44%), Gaps = 69/385 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 75
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 76 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 135
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 136 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 179
Query: 308 EMHMQMP--NPQMDHIPPPQ-------------SWGPPQGLPPSGGPGYGHNPQYMPPPR 352
E Q P + + P P S G P P NP PP
Sbjct: 180 ETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 239
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNA----QSTPSM---------I 399
+A + +P P + HQ ++ P+ HG++ S+P +
Sbjct: 240 EAYTIQGQYAIPQPDLTKLHQ-LAMQQSHFPMT-HGNTGFSGIESSSPEVKGYWASLDAS 297
Query: 400 TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQV 458
TQ T ++ IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ +
Sbjct: 298 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASI 356
Query: 459 QTAQQLIQNFMAEAAAPSQAQMGAS 483
AQ LI A S+ MG S
Sbjct: 357 SLAQYLIN-----ARLSSEKGMGCS 376
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 25/216 (11%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR+L P KV +++ ++ + + +++ D G+ ER V+I+++E P+ L
Sbjct: 343 IFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHELF 402
Query: 191 PAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
PA + +L + IVD G D D+ ++T+LLVP+S+ G++ G++ IQ
Sbjct: 403 PAQEAVLHIQTHIVDLGPDKDNI---------ITTRLLVPSSEIACFDGRE-GSLSDIQR 452
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
++ V++L EDLP+ AL+ D ++++VG+ S A+ + + LR FL
Sbjct: 453 QTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSFL----------- 501
Query: 310 HMQMPNP-QMDHIPPPQSWGPPQGLPPSGGPGYGHN 344
+ +M P Q+ +I + P G P GGP G++
Sbjct: 502 YREMSGPIQVGNINVHGAISPVAGSP--GGPNLGND 535
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI----SAKEEPES 187
FR+L P K G F+ K+ +++ A + + PP + +I A+ E +
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDDSGALVTV--HPPFAGDYVRVIETVDGARREADG 145
Query: 188 SLP---PAMDGLLRVHKRIVD----GLDSDSSHAPSGTG----GKVSTKLLVPASQAGSL 236
P PA + LL VH+RI++ D D + P G GK +T+L+VP G L
Sbjct: 146 RPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPKMHVGCL 205
Query: 237 IGKQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+GK G ++ ++ + +R+L + P + VV+VVGD + V KA+ +I L+
Sbjct: 206 LGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLK 265
Query: 296 KFLVDRSIIPLFEMHMQMPNPQM 318
+ L R P F M P P++
Sbjct: 266 ESL-HRDRGP-FRGRMNSPEPRI 286
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 148/330 (44%), Gaps = 38/330 (11%)
Query: 154 KIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSH 213
+I +ET A IK++D P ER +++S+KE + + P ++ +L + +
Sbjct: 21 QIRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTLEAVLHLQ------FKTSEKS 74
Query: 214 APSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRV 273
G G ++T+ LVP++ G L+GK G + +++ + +R++ +++P A +++ +
Sbjct: 75 IEEGKEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAGENEEL 134
Query: 274 VEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGL 333
V+V+G+ +A+ I + LR + Q + PP +G+
Sbjct: 135 VQVIGEVDVAREALIQIATRLRSNV----------FKDQDGGSNAGSVVPPSLSLYGRGV 184
Query: 334 PPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGR-----EAPVNVHG 388
P S G+G + R Y L ++YG +G
Sbjct: 185 PDS---GFGRGDELGSTGR----MYSLPSLGLEGTASGRYSSASYGSLGGVQNGGAGGYG 237
Query: 389 SSNAQST--------PSMITQ--VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQ 438
S ++ ST P+ + + T ++ IP +++G G++IS IR SGA V +
Sbjct: 238 SFSSFSTSRAPAGGLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQIREISGAKVKLH 297
Query: 439 ETRGVPGEMTVEISGTASQVQTAQQLIQNF 468
E++ + VEISGT Q AQ L+Q F
Sbjct: 298 ESKPGGTDRVVEISGTPEQTHAAQSLLQAF 327
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
S + +P + VGSI+GR G I +I E + A++K+ + PG T+R V IS E
Sbjct: 261 STVEVTIPNKSVGSILGRGGSNISQIREISGAKVKLHESKPGGTDRVVEISGTPE 315
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 151/351 (43%), Gaps = 45/351 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + RML P+ K+G +IGR G IK + + + RI++ D E ++I+ E P
Sbjct: 119 ELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPSDL 178
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L + +I D D++ VS +LLVP+ G +IGK G + I+
Sbjct: 179 KSMAVEAVLLIQGKISDEDDTE-----------VSIQLLVPSKVIGCIIGKSGSIINEIR 227
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + +R+ D P A +D +VEV G V A+ I LR +
Sbjct: 228 KRTRADIRI-SKGDKPKCADVNDELVEVGGAIDCVRDALIQIILRLRD--------DVLR 278
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES----------YY 358
NP + S G LPP P M ++AES
Sbjct: 279 ERDTGHNPTIGG-ESLYSGGAAYSLPPM-LPSVSSVAAPMVYDQRAESATGMGMLSSSSL 336
Query: 359 PPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
M + + IS+Y P ++GS ST ++ IP + V+G
Sbjct: 337 YGYGSLSQMWESGYGSISSY----PTKLYGSLPPPSTLDIL--------IPANAVGKVLG 384
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
GA+I+ IR+ SGAT+ I + R G+ ISGT + + A+ LIQ F+
Sbjct: 385 KGGANIANIRKISGATIEISDARA-RGDRIALISGTPEEKRAAENLIQAFI 434
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 165/355 (46%), Gaps = 28/355 (7%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ AR+ I +G ER + I+
Sbjct: 29 LRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITG---------- 76
Query: 192 AMDGLLRVHKRIVDGLDSD-SSHAPSGTGGK---VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ D + R I L+ D ++ +GT V+ +L++PASQ GSLIGK G +K I
Sbjct: 77 STDSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEI 136
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ ++V G + LP +R V + G+ V + ++LI + + + + IP
Sbjct: 137 RESTGAQIQVAG-DLLPN---STERGVTISGNQDSVIQCVKLICTVILESPPKGATIP-- 190
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLP-PSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
+ P+P I Q + P P G Q + P ++L
Sbjct: 191 --YRPTPSPAALLIAGNQVFEASDFAPHPLYSVTQGGLDLQQAYALQNQYGIPHSELAKL 248
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI---TQVTQQMQIPLSYADAVIGTAGAS 423
+ QG+S + A + G PS + +Q +Q++ IP ++IG G
Sbjct: 249 HQLSVQQGLSPIAQPASTIMPGKLLLHFLPSGMDSTSQTSQELLIPNDLIGSIIGRQGTK 308
Query: 424 ISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQA 478
I+ IR+ SGA + I + V I+GT + AQ LI + + A + +QA
Sbjct: 309 INEIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAKSTAQA 363
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 207 LDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
++ + G G ++ +LL+ + GS+IGK+G TVK I+E S+ V + P
Sbjct: 12 MNCEQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNI-SEGSCP-- 68
Query: 267 ALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
+R++ + G V +A +I L + L
Sbjct: 69 ----ERIITITGSTDSVFRAFTMITYKLEEDL 96
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 101/180 (56%), Gaps = 15/180 (8%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
++V+R L P +K+GSIIG+ GE K++ ++++ I+I + PG ER V I + E E++
Sbjct: 41 DTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSE-ETN 99
Query: 189 L--------PPAMDGLLRVHKRIV-DGLDSDSSHAPS-----GTGGKVSTKLLVPASQAG 234
L PA D L VH R++ + L++ ++ G +V+ ++LVPA Q G
Sbjct: 100 LFGETGEYVCPAQDALFMVHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIG 159
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+IGK G +++I+ + +R+ + LP AL D ++ + G+ S V KA+ + + L
Sbjct: 160 CVIGKGGQVIQNIRSETCAQIRITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATRL 219
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 157 EETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS 216
+E+RA IK+ + + ISAKE E P M+ LR+ R D + +S +
Sbjct: 306 QESRASIKVDSSGAEGDDCIIFISAKEFFEDQ-SPTMNAALRLQPRCSDKTEKESGDSV- 363
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
++T+LLV SQ G L+GK G + ++ + +R++ ++LP A++DD +V+V
Sbjct: 364 -----ITTRLLVGRSQIGCLMGKGGAIISEMRNQTRANIRIISEDNLPKVAVEDDEMVQV 418
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 175/401 (43%), Gaps = 75/401 (18%)
Query: 108 QENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD 167
+ENE+N+ + R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +
Sbjct: 105 EENELNVTL--------------TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE 150
Query: 168 GPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VS 223
G ER + +L + + + I+D L+ D SS S + V+
Sbjct: 151 G--NCPERII----------TLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVT 198
Query: 224 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGV 283
+L+VPA+Q GSLIGK G +K I+E++ V+V G + LP +R + + G V
Sbjct: 199 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG-DMLPN---STERAITIAGVPQSV 254
Query: 284 HKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG---- 338
+ ++ I + + E Q P ++ IP P P + +GG
Sbjct: 255 TECVKQI------------CLVMLETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRC 300
Query: 339 ---PGYGHNPQYMPPP------RQAESYYPPADLPP--PMEKQPHQGISAYGREAPVNVH 387
GY H + P Q + P DL + +Q +G +
Sbjct: 301 SDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGID 360
Query: 388 GSS----NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRG 442
SS ++ TQ T ++ IP + +IG GA+I+ IR+ SGA + I G
Sbjct: 361 SSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEG 420
Query: 443 VPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGAS 483
G V I+G+A+ + AQ LI A S+ MG S
Sbjct: 421 SSGRQ-VTITGSAASISLAQYLIN-----ARLSSEKGMGCS 455
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 117 GSTEKKWPGW----PGESV------FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 166
G T +WP P +SV R++ P +G +IG+ G IK+I +E+ A IK+
Sbjct: 73 GDTGSEWPNAFYPAPRDSVSAKEFSLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVD 132
Query: 167 DGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
+ + IS+KE E + P +D +R+ + + D +S + +T+L
Sbjct: 133 SSAAEADDCIISISSKEFFEDPISPTIDAAVRLQPKCSEKSDRESGDS------TFTTRL 186
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LVP S+ G LIGK G + +++ + +R+L E+LP A +DD +V++ GD A
Sbjct: 187 LVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKENLPKVASEDDEMVQITGDLDVARNA 246
Query: 287 MELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGP 329
+ + + L+ +R + PPP S+ P
Sbjct: 247 LIQVTTRLKTNFFER-------------EGALSAFPPPLSYLP 276
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 148/358 (41%), Gaps = 73/358 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI------------CVVML 167
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-------------------M 348
E+ + P + + P+ P +GG Y QY
Sbjct: 168 EVQSKSPPRGVSRVVAPKPASTPVIF--AGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPF 225
Query: 349 PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQI 408
PP Q +P D P + P + A P + H ++ I
Sbjct: 226 PPLGQTNPAFPGTDRAVPFVRSPWACLDA---SPPASTH-----------------ELTI 265
Query: 409 PLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
P +IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 266 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 323
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 157/355 (44%), Gaps = 50/355 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMP--NPQMDHIPPPQ-------------SWGPPQGLPPSGGPGYGHNPQYMPPPR 352
E Q P + + P P S G P P NP PP
Sbjct: 168 ETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 227
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLS 411
+A + +P P + HQ ++ P+ HG++ + Q T ++ IP
Sbjct: 228 EAYTIQGQYAIPQPDLTKLHQ-LAMQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPND 285
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 286 LIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 340
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 163/363 (44%), Gaps = 53/363 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ AR+ I +G ER + I+
Sbjct: 18 LRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITG---------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTK------LLVPASQAGSLIGKQGGTVK 245
+ D + R I L+ D A G +STK L++PASQ GSLIGK G +K
Sbjct: 66 STDCVFRAFTMITHKLEED--LAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIP 305
I+E++ ++V G + LP +R V + G+ V + ++LI + + + + IP
Sbjct: 124 EIRESTGAQIQVAG-DLLPN---STERGVTISGNQDSVIQCVKLICTVILESPPKGATIP 179
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPP----------PRQAE 355
+ P+P I Q + + + +P Y Q +
Sbjct: 180 ----YRPSPSPAAVLIAGNQLFDASE---------FATHPMYSVAQGGLDLQQAYTLQNQ 226
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
P ++L + QG++ + A + ++ S Q +Q++ IP +
Sbjct: 227 YGIPHSELAKLHQLSMQQGLNPIAQPASTVIPAGMDSNS------QTSQELLIPNDLIGS 280
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAP 475
+IG G I+ IR+ SGA + I + V I+GT + AQ LI + + A +
Sbjct: 281 IIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAKST 340
Query: 476 SQA 478
+QA
Sbjct: 341 AQA 343
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
G G ++ +LL+ + GS+IGK+G TVK I+E S+ V + P +R++ +
Sbjct: 11 GLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNI-SEGSCP------ERIITI 63
Query: 277 VGDASGVHKAMELIGSHLRKFL 298
G V +A +I L + L
Sbjct: 64 TGSTDCVFRAFTMITHKLEEDL 85
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 100/180 (55%), Gaps = 15/180 (8%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
++V+R L P +K+GSIIG+ GE K++ ++++ I+I + PG ER V I + E E++
Sbjct: 9 DTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSE-ETN 67
Query: 189 L--------PPAMDGLLRVHKRIV-DGLDSDSSHAPS-----GTGGKVSTKLLVPASQAG 234
L PA D L VH R++ + L++ ++ G +V+ ++LVP Q G
Sbjct: 68 LFEDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRMLVPTDQIG 127
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+IGK G +++I+ + +R+ E LP AL D ++ + G+ S V KA+ + + L
Sbjct: 128 CVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKALYQVATRL 187
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 157 EETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS 216
+E+RA IK+ + + ISAKE E P M+ LR+ R + + +S +
Sbjct: 276 QESRASIKVDSSGAEGNDCIIFISAKEFFEDQ-SPTMNAALRMQPRCSEKTEKESGDSV- 333
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
++T+LLV SQ G L+GK G + ++ + +R++ ++LP A +DD +V++
Sbjct: 334 -----ITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQI 388
Query: 277 VGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPS 336
G A+ + L+ + R + + PP + P L S
Sbjct: 389 TGSLEVASNALLQVILRLKANIFGR-------------DGALTTFPPALPY-IPVSLDTS 434
Query: 337 GGPGYG 342
GP YG
Sbjct: 435 DGPKYG 440
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 169/369 (45%), Gaps = 68/369 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQY-MPPP--------RQAES 356
E Q P P+ IP P S P + +GG Y QY +P P +S
Sbjct: 168 ETLSQSP-PKGVTIPYRPKPSSSP---VIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 223
Query: 357 YYPPADLPPPMEKQPHQGISAYGREAP-VNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
++P + G S +P V + +S S TQ T ++ IP +
Sbjct: 224 HFPMT--------HGNTGFSGIESSSPEVKGYWASLDAS-----TQTTHELTIPNNLIGC 270
Query: 416 VIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAA 474
+IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI A
Sbjct: 271 IIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI-----NARL 324
Query: 475 PSQAQMGAS 483
S+ MG S
Sbjct: 325 SSEKGMGCS 333
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 167/383 (43%), Gaps = 67/383 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE K+ +E+ ARI I +G ER + +L
Sbjct: 16 IRLLMHRKEVGSIIGKKGESPKRFRKESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP----PPQS----------WGPPQGLPPSGGPGYGHNPQYMP-PPR 352
E Q P ++ IP P S WG G P + G Y H+ Y+ PP
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRWGYAAGYPHAAG--YPHDTHYLEGPPL 225
Query: 353 QAESY-----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQ 401
A S P DL + +Q +G + +S ++ TQ
Sbjct: 226 DAYSIQGQHTVSPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLDASTQ 285
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQT 460
T + IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ +
Sbjct: 286 TTHEFTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISL 344
Query: 461 AQQLIQNFMAEAAAPSQAQMGAS 483
AQ LI A S+ MG S
Sbjct: 345 AQYLI-----NARLSSEKGMGCS 362
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 174/379 (45%), Gaps = 48/379 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I +E+ ARIKIL+G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ + + I+ L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I+
Sbjct: 64 PTNAIFKAFAMIIYKLEEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKEIR 123
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+++ V+V G + LP +R + + G V K ++ I + + L S P +
Sbjct: 124 KSTGAQVQVAG-DMLPN---STERAITIAGVPQSVTKCVKQICLVMLETL---SHSPQGK 176
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY--------YPP 360
+ + P P + G + +G P H+ + PP A S
Sbjct: 177 VKTILYQPMPSRSPVTCAGGQDRCSDAAGYPHATHDLE--GPPLDAYSIQGQHTISPLNL 234
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQIPLSYADAV 416
A L +Q H + +G + SS ++ TQ+T ++ IP + +
Sbjct: 235 AKLNQVARQQSHFAM-MHGGTGFAGIDSSSPEVKGYWASLDASTQITHELTIPNNLIGCI 293
Query: 417 IGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAP 475
IG G +I+ IR+ SGA + I G G V I+G+A+ + AQ LI+ A
Sbjct: 294 IGRQGTNINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLIK-----ARLS 347
Query: 476 SQAQMGASADQGYNPYASM 494
S+ MG S +N S+
Sbjct: 348 SEKGMGCS----WNSVGSL 362
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 157/347 (45%), Gaps = 38/347 (10%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + R+L P K+G +IGR G IK + E + A +++ D E + +++ E +
Sbjct: 118 ELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDL 177
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L + +I D D D+ V+ +LLVP+ G +IGK G + I+
Sbjct: 178 KSMAVEAVLLLQAKINDE-DDDT----------VAIRLLVPSKIIGCIIGKSGSIINEIR 226
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + VR+ +E P A +D ++EVVG+ V A L +
Sbjct: 227 KRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDA-------------------LVQ 266
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMP--PPRQAESYYPPADLPPP 366
+ +++ + + + SGG G + +P PP SY A+
Sbjct: 267 IVLRLRDDALKDRDTGHNTSAGTDSLYSGGAGLSVS-SVLPSAPPVAPLSYDQRAETGSG 325
Query: 367 MEKQPHQGISAYGREAP-VNVHGSSNAQSTP---SMITQVTQQMQIPLSYADAVIGTAGA 422
+ + YG + N +GS ++ S+ + T T M IP + V+G GA
Sbjct: 326 LGLLSSSSLYGYGSLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGA 385
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+I+ IR+ SGA + I +++ G+ ISGT Q +TA+ LIQ F+
Sbjct: 386 NIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAENLIQAFI 432
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 80/205 (39%), Gaps = 48/205 (23%)
Query: 268 LQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSW 327
++ D V + GD+ V KA+ I + + KF P E+ + P+
Sbjct: 1 MEFDNFVLIAGDSEAVKKALFAISAIMYKF------TPREEIPLDTTVPE---------- 44
Query: 328 GPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL------PPPMEKQPH----QGISA 377
PP + PS P Y A +YP AD PP+ H QG S
Sbjct: 45 APPSIIIPSDVPIY-----------PAGGFYPSADSIVSARSVPPVLAATHVPELQGYSD 93
Query: 378 YGREAPVN------VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSS 431
G PV V G ++S +I ++ P VIG G+SI +R +S
Sbjct: 94 MGSTWPVYSSNLPVVSGYGASRSEELII-----RVLCPFDKIGRVIGRGGSSIKSVREAS 148
Query: 432 GATVTIQETRGVPGEMTVEISGTAS 456
GA V + +T+ E + ++ T S
Sbjct: 149 GAHVEVDDTKADRDECLITVTSTES 173
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
+ K + G P S F M++PA VG ++G+ G I I + + A I+I D +R +
Sbjct: 354 SSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVAL 413
Query: 179 ISAKEE 184
IS E
Sbjct: 414 ISGTPE 419
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 36/297 (12%)
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
+ ++ P+ L PA + +L + IVD G D D+ ++T+LLVPAS+
Sbjct: 150 VDSRRGPDHELFPAQEAVLHIQTHIVDLGPDMDN---------IITTRLLVPASEIACFD 200
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
G++G ++ IQ ++ V++L EDLP AL+ D ++++VG+ A+ + + LR F
Sbjct: 201 GREG-SLSDIQRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSF 259
Query: 298 LVDRSIIPLFEMHMQMPNP-QMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
L + +MP+P Q+ +I + P G P GP G++ +P +
Sbjct: 260 L-----------YREMPDPIQVGNINLHGAISPVAGSPR--GPYQGND---IP----MGA 299
Query: 357 YYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPS----MITQVTQQMQIPLSY 412
Y+ + L + G ++ E N++ +T ++T+ T ++ IP S
Sbjct: 300 YHQASQLATSWHSKDSGGSASGSFEQGSNINDDIRQSATKRFAVPLVTRSTLEIVIPNSA 359
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
++ AG+ ++ I SGA VT+ E R + V ISGT Q A+ L+Q F+
Sbjct: 360 VASLTMRAGSKLAQISEISGAAVTLAEDRSDILQKVVRISGTPEQASKAENLLQGFI 416
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 162/393 (41%), Gaps = 56/393 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF++L + G +IG G+ ++ + ET A I + + ER + ++A E PE
Sbjct: 461 VFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPENPECQSS 520
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA ++ + R+ + S +G ++ +L+VP SQ G ++GK G V +++
Sbjct: 521 PAQKAIMLLFSRLFEL--STKKILDNGPRTSITARLVVPTSQIGCVLGKGGVIVSEMRKT 578
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE-- 308
+ +++L E P ++D+V+++ G+ V +A+ I S LR + S+
Sbjct: 579 TGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDSVFSNSMKNSITKS 638
Query: 309 ---------MHMQMPNP------QMDHIPPPQSWGPPQGLPPSGGPG----------YGH 343
H Q NP Q PP S + S G G
Sbjct: 639 SSALTTERIYHRQSDNPLSIGSHQSVSNPPTNSSSLHRRSEDSFLSGSHSSVNYSRPVGT 698
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQ---PHQGISAYGREAPVNVHGS----------- 389
+P P + + P A P ++ H IS + E P + S
Sbjct: 699 DPYVRPEDPFPDRFNPSAGYSPNFGRRFTMDHSDISHHLTEVPSRLWASPPPAAPRGLSD 758
Query: 390 -----SNAQS--------TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVT 436
S+A++ +++T T ++++P + V G G ++ +R+ SGA V
Sbjct: 759 ASGGLSSARAGHALGSGHKSAIVTNTTVEIRVPENAMSFVYGEQGYNLEQLRQISGARVI 818
Query: 437 IQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ E + + ISGT Q Q AQ L+ F+
Sbjct: 819 VHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFI 851
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G + FR+L P VG++IG+ G IK++ + T A+I++ + P G+ +R + I A+ + +S
Sbjct: 43 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKS 102
Query: 188 SLP---------------------PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
+ A L++V + + DSD+ V +L
Sbjct: 103 RVKLGVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT----------VVCRL 152
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
L +S AG++IGK G V SI++ + C + + E+LP+ A DD +VE+ G+A V KA
Sbjct: 153 LTESSHAGAVIGKGGQMVGSIRKETGCKISI-RTENLPICADTDDEMVEIEGNAIAVKKA 211
Query: 287 MELIGSHL 294
+ I L
Sbjct: 212 LVSISRCL 219
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 167/375 (44%), Gaps = 57/375 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP----PPQS-----WGPPQGLPPSGGPGYGHNPQYMPPPR---QAE 355
E Q P ++ IP P S G + +G P H+ + P Q +
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGTPLDAYSIQGQ 227
Query: 356 SYYPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQIP 409
P DL + +Q +G + SS ++ TQ T ++ IP
Sbjct: 228 HTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIP 287
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQNF 468
+ +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 288 NNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLIN-- 344
Query: 469 MAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 345 ---ARLSSEKGMGCS 356
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 25 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 72
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 73 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 132
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 133 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 176
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 177 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 234
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 235 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 294
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 295 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 352
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 353 ----NARLSSEKGMGCS 365
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 160/352 (45%), Gaps = 36/352 (10%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEP 185
+ E VF++L PA K+ ++G I + E +++ D G+ E+ + IS++E P
Sbjct: 321 YSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAP 380
Query: 186 ESSLPPAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ PA + LL + +I+D + D D+ ++T+LLVP+ + L GK G+V
Sbjct: 381 DDPFFPAQEALLHIQTQIIDLIPDKDN---------LITTRLLVPSRDSICLEGK-AGSV 430
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
I + V++L E++P A +D V+++ G+ +A LV+ ++
Sbjct: 431 SEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREA-----------LVELTL- 478
Query: 305 PLFEMHMQMPNPQMDHIPPPQSW-GPPQGLPPSGGPGYGHNP-QYMPPPRQAESYYPPAD 362
L HM Q + P S GP +G+ +N Q P +
Sbjct: 479 -LLRSHMFKELSQKETPPASTSTTGPLEGVAGVMEVASSNNTIQSREGPTSSNLNLQQVS 537
Query: 363 LPPPMEKQ-----PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVI 417
P K+ G S + E PV +++ + P ++T+ T ++ +P + ++
Sbjct: 538 TILPQFKEGFGSVAKAGESEHREEVPV----TTSRMAVP-LVTRSTLEVVLPEAVVPKLV 592
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ ++ I SGA+VTI E R + + ISGT Q + AQ L+Q F+
Sbjct: 593 TKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAERAQSLLQGFI 644
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 29/199 (14%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K P + +R+L K G +IG+ G IK I + T A I + + PG ER + IS
Sbjct: 59 KSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 118
Query: 181 --AKEEPESSLP---PAMDGLLRVHKRIVDGLDSDSSHAPSGTGG--------------- 220
+ +P+ +P PA + L VH RI++ S A G GG
Sbjct: 119 DNRRRDPDGRMPSFSPAQEALFSVHDRILE------SEAQFGYGGPPPEEEEDYGGVRPG 172
Query: 221 --KVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVV 277
+V T+L+V G L+GK G ++ ++ + +R+L E +LP + +V++V
Sbjct: 173 GGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIV 232
Query: 278 GDASGVHKAMELIGSHLRK 296
G+ + V A+ ++ S LR+
Sbjct: 233 GELNAVKNALAIVSSRLRE 251
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 183/392 (46%), Gaps = 55/392 (14%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK 182
P PG FR+L A ++G IIG+ G IK++ +++ A+I+I + P +++R + + A+
Sbjct: 49 LPLPPGHVSFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAE 108
Query: 183 ---------EEPESSLPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQ 232
E E + A +GL+RV +RI++ +SD + +G GG VS ++L + Q
Sbjct: 109 GQIVSKVRVESEEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQ 168
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
AGS+IGK G V+ I++ +RVL + LPV A ++ ++E+ GD V KA+ +
Sbjct: 169 AGSVIGKGGKVVEKIRKDCGVKIRVL-TDKLPVCAGPNEEMIEIEGDILSVKKALIAVSR 227
Query: 293 HLRKFL-VDRSII---PLFEMHMQMPNPQMD-HIPPPQSWGPP--QGLPPSGGPGYGHN- 344
L+ VD+ + FE Q P P+M I P ++ P Q S P HN
Sbjct: 228 CLQDCQPVDKPRVGSSKYFEAVPQEPLPEMRVEIAPQRNIMVPTMQNNAVSCAP-VPHNF 286
Query: 345 -------PQYMPPPRQAESYYP---PADLPPPMEKQPHQGISAYGREAPVNVH-GSSNAQ 393
P Q E + P D+ + + I A E ++ G++ A+
Sbjct: 287 LLETDRVPSLDMKLFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAE 346
Query: 394 STPSMIT-------------------QVTQQMQIPLSYADAVIGTAGASISYIRRSSGAT 434
S +IT V ++ +P + ++G G IS +R+++G +
Sbjct: 347 SDERLITVIASENPESRYSAAQKAVVLVFSRLVVPSNQVGCLLGKGGIIISDMRKTTGTS 406
Query: 435 VTI----QETRGVP-GEMTVEISGTASQVQTA 461
+ I Q + VP E V+ISG V+ A
Sbjct: 407 IKILAGDQLPKCVPENEQVVQISGDFMNVKDA 438
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E VF++L P VG +IG+ G IK + ET A I I + ER + + A E PES
Sbjct: 304 EVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVIASENPESR 363
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A ++ V R+V VP++Q G L+GK G + ++
Sbjct: 364 YSAAQKAVVLVFSRLV-----------------------VPSNQVGCLLGKGGIIISDMR 400
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ + +++L + LP ++++VV++ GD V A+ + LR L ++
Sbjct: 401 KTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHVTGRLRDNLFSSAL 455
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
S +++T T ++++P + +V G ++++ +R+ SGA V + E R + + ISG
Sbjct: 617 SKSAIVTNTTVEIRVPENVIGSVYGENDSNLTRLRQISGAKVIVHEPRLGSSDRIIVISG 676
Query: 454 TASQVQTAQQLIQNFM 469
T + Q AQ L+Q F+
Sbjct: 677 TPDETQAAQSLLQAFI 692
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 157/351 (44%), Gaps = 56/351 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIFQCVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQY-MPPPRQAESYYPPAD- 362
+ ++ P P+ IP + P P +GG Y QY +P P Q + A
Sbjct: 164 VVMLESP-PKGATIP----YRPKPACTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQ 218
Query: 363 ---LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADA 415
PP + P + + + E N+ G SS ++P T ++ IP
Sbjct: 219 QTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGC 275
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 276 IIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 326
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 259 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 11/184 (5%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E RM+ P +G++IG+ G I +I +E+ A IK+ + + ISAKE +
Sbjct: 30 EFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLITISAKEICDDQ 89
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ LR+ R + ++ DS +T+LLVP+S G L+GK G + ++
Sbjct: 90 YSPTIEAALRLQPRCSEKMERDSGLFS------FTTRLLVPSSHIGCLLGKGGLIIDEMR 143
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR-----SI 303
+ + I+R+ + LP AL DD +V++ GD A+ I LR DR +I
Sbjct: 144 KLTKAIIRIPRKDKLPKTALDDDEMVQISGDLDIAKDALIQISRRLRANAFDREGLMSAI 203
Query: 304 IPLF 307
+P+F
Sbjct: 204 LPVF 207
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 15 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 62
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 63 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 122
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 123 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 166
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 167 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 224
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 225 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 284
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 285 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 342
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 343 ----NARLSSEKGMGCS 355
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 225
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 343
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 344 ----NARLSSEKGMGCS 356
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 25 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 72
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 73 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 132
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 133 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 176
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 177 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 234
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 235 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 294
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 295 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLIN 353
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 354 -----ARLSSEKGMGCS 365
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 167/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMPPP------RQ 353
E Q P ++ IP P P + +GG GY H + P Q
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCGDAAGYPHATHDLEGPPLDAYSIQ 225
Query: 354 AESYYPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
+ P DL + +Q +G + SS ++ TQ T ++
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 343
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 344 ----NARLSSEKGMGCS 356
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 139/311 (44%), Gaps = 64/311 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV + VG+IIGR+G I++I + TRAR+ + G+ E+A+ I PE+
Sbjct: 189 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGN--PENCTN 246
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
K+I++ + + A S G+++ K+L + G +IGK G T+K I +
Sbjct: 247 AC--------KKILEVMQQE---ANSINKGEITLKILAHNNLIGRIIGKGGTTIKRIMQD 295
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + V D+ F L +R++ V G + KA +I S LR+ +E
Sbjct: 296 TDTKITVSSINDINSFNL--ERIITVKGTIENMSKAESMISSKLRQS---------YEND 344
Query: 311 MQMPNPQMDHIPP--PQSWGPPQGLP-PSGGPG-YGHNPQYMPPPRQAESYYPPADLPPP 366
+Q PQ P P + G+ S GPG YG P P P Q A LP
Sbjct: 345 LQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGP--APYPYQ-------ASLP-- 393
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
P QG+ P+ TQ T + IP S A+IGT G+ I
Sbjct: 394 ----PQQGV--------------------PATDTQETAFLYIPNSSVGAIIGTKGSHIRN 429
Query: 427 IRRSSGATVTI 437
I R SGA+V I
Sbjct: 430 IIRFSGASVKI 440
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGPP-GTTERAVMISAKE 183
E+ F + +P VG+IIG KG I+ I+ + A +KI D P TER V I
Sbjct: 405 ETAF-LYIPNSSVGAIIGTKGSHIRNIIRFSGASVKIAPIEQDKPAEQQTERKVTIVGSP 463
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
E + + +R + V G D +++ ++LVP++Q G +IGK G
Sbjct: 464 ESQWKAQYLIFEKMR-EEGFVAGTDDV----------RLTIEILVPSAQVGRIIGKGGQN 512
Query: 244 VKSIQEASNCIVRV 257
V+ +Q + I+++
Sbjct: 513 VRELQRVTGSIIKL 526
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 13/149 (8%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS-LP 190
FR+L A +VG+IIG+ G IK + E T A+I+I+D PP + +R +++SA E L
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPSVTEDGELS 86
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGT---GGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
A + LL+V R++D +GT VS +LL SQ G++IGK G V+ I
Sbjct: 87 TAQEALLKVFDRVLD--------VAAGTEVGDLVVSCRLLAETSQVGAVIGKAGKVVEKI 138
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEV 276
+ + C +RVL E LP D +VEV
Sbjct: 139 RMDTGCKIRVLN-EGLPAGTAPSDEIVEV 166
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 158/347 (45%), Gaps = 40/347 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMP-------PPRQAESYYPP 360
P P P + Q SG Y H M PP++A +
Sbjct: 179 -----RPKPS----SSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQ 229
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGT 419
+P P + HQ ++ P++ HG++ + Q T ++ IP +IG
Sbjct: 230 YAIPQPDLTKLHQ-LAMQQSHFPMS-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGR 287
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 288 QGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 334
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 160/352 (45%), Gaps = 36/352 (10%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEP 185
+ E VF++L PA K+ ++G I + E +++ D G+ E+ + IS++E P
Sbjct: 321 YSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAP 380
Query: 186 ESSLPPAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ PA + LL + +I+D + D D+ ++T+LLVP+ + L GK G+V
Sbjct: 381 DDPFFPAQEALLHIQTQIIDLIPDKDN---------LITTRLLVPSRDSICLEGK-AGSV 430
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
I + V++L E++P A +D V+++ G+ +A LV+ ++
Sbjct: 431 SEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREA-----------LVELTL- 478
Query: 305 PLFEMHMQMPNPQMDHIPPPQSW-GPPQGLPPSGGPGYGHNP-QYMPPPRQAESYYPPAD 362
L HM Q + P S GP +G+ +N Q P +
Sbjct: 479 -LLRSHMFKELSQKETPPASTSTTGPLEGVAGVMEVASSNNTIQSREGPTSSNLNLQQVS 537
Query: 363 LPPPMEKQ-----PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVI 417
P K+ G S + E PV +++ + P ++T+ T ++ +P + ++
Sbjct: 538 TILPQFKEGFGSVAKAGESEHREEVPV----TTSRMAVP-LVTRSTLEVVLPEAVVPKLV 592
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ ++ I SGA+VTI E R + + ISGT Q + AQ L+Q F+
Sbjct: 593 TKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAERAQSLLQGFI 644
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 29/199 (14%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K P + +R+L K G +IG+ G IK I + T A I + + PG ER + IS
Sbjct: 59 KSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 118
Query: 181 --AKEEPESSLP---PAMDGLLRVHKRIVDGLDSDSSHAPSGTGG--------------- 220
+ +P+ +P PA + L VH RI++ S A G GG
Sbjct: 119 DNRRRDPDGRMPSFSPAQEALFSVHDRILE------SEAQFGYGGPPPEEEEDYGGVRPG 172
Query: 221 --KVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVV 277
+V T+L+V G L+GK G ++ ++ + +R+L E +LP + +V++V
Sbjct: 173 GGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIV 232
Query: 278 GDASGVHKAMELIGSHLRK 296
G+ + V A+ ++ S LR+
Sbjct: 233 GELNAVKNALAIVSSRLRE 251
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 159/357 (44%), Gaps = 34/357 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + ++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHIPPP-----QSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 179 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 233
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAG 421
+P P + HQ ++ P+ HG++ + Q T ++ IP +IG G
Sbjct: 234 IPQPDLTKLHQ-LAMQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQG 291
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQA 478
A I+ I + SGA + I + V I+G+A+ + AQ LI + A SQA
Sbjct: 292 AKINEIHQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLENAKPSSQA 348
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGP-------GYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAVGYPHATHDLEGPPLDAYSIQ 225
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 343
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 344 ----NARLSSEKGMGCS 356
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 15 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 62
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 63 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 122
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 123 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 166
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 167 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 224
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 225 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 284
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G + I+G+A+ + AQ LI
Sbjct: 285 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-ITITGSAASISLAQYLI- 342
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 343 ----NARLSSEKGMGCS 355
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 155/345 (44%), Gaps = 34/345 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHI-----PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 179 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 233
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAG 421
+P P + HQ ++ P+ HG++ + Q T ++ IP +IG G
Sbjct: 234 IPQPDLTKLHQ-LAMQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQG 291
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
A I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 292 AKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 336
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E+V+R L P +K GSIIG+ G+ K+I ET++ ++I + PG ER V I + E +
Sbjct: 43 ETVYRYLCPVKKTGSIIGKGGDIAKQIRSETKSNMRINEALPGCEERVVTIYSTNEELNH 102
Query: 189 L-------PPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK--VSTKLLVPASQAGSLIGK 239
PA+D L +VH +V +D D + G K V+ ++LVP+ Q G +IGK
Sbjct: 103 FGDDGELVCPALDALFKVHDMVVADIDHDDGNDDDDLGEKQTVTVRMLVPSDQIGCVIGK 162
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFA--LQDDRVVEVVGDASGVHKAMELIGSHL 294
G +++++ +N +RV+ + LP A L D +++++G+ V +A+ + S L
Sbjct: 163 GGQVIQNLRNDTNAQIRVI-KDHLPSCALTLSHDELLQIIGEPLVVREALYQVASLL 218
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 9/180 (5%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + PA+ VG +IG+ G FI +I +ET A I++ + ++IS+KE E
Sbjct: 266 EFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDEDDCIIVISSKEFYEDQ 325
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA++ +R+ +R + + D++ +ST+LLV +SQ G LIGK G + ++
Sbjct: 326 -SPAVNAAIRLQQRCSEKVGKDANDLA------ISTRLLVSSSQIGCLIGKGGAVISEMR 378
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR--KFLVDRSIIPL 306
+ +R+L ED+P A +D+ +V++ G+ KA+ + LR F +D ++ L
Sbjct: 379 SVTRANIRILQKEDVPKIAREDEEMVQITGNPDAAMKALTQVILRLRANSFDMDHGLVLL 438
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 155/345 (44%), Gaps = 34/345 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHI-----PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 179 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 233
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAG 421
+P P + HQ ++ P+ HG++ + Q T ++ IP +IG G
Sbjct: 234 IPQPDLTKLHQ-LAMQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQG 291
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
A I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 292 AKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 336
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 144/338 (42%), Gaps = 48/338 (14%)
Query: 107 KQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 166
+ ++V + G ++ G E +R+L PA ++G++IG+ G I+++ + T ARIK+
Sbjct: 10 RHSDDVQMEAGVVKRSAAGAMVE--YRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVE 67
Query: 167 DGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
G +ER + +S+ +EP + L A + L V R+ S++ A T V ++
Sbjct: 68 PEVAGCSERLISLSSSDEPGAELCRAQEALFAVQSRL-----SEADAAQEDTCCVV--RM 120
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LV +Q G ++GK G + ++ + +RV DLP A +D +V V G+A V A
Sbjct: 121 LVEQAQVGCVLGKGGEVISDLRRRTGANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDA 180
Query: 287 MELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ 346
+ R + L H Q PQ P + P+
Sbjct: 181 L-------------RQLSALLRTHSQR---------KPQQARAPMTFNITAVATAAVQPE 218
Query: 347 YMPPPRQAESYYPPADLP--PPMEKQPHQGISAYGREAPVNVHG---SSNAQSTPSMITQ 401
QA+ P P P+ + PHQ + + H A S + +
Sbjct: 219 ------QAQHRRQPMREPVLAPIAR-PHQCHNCLP-----DAHAMQPRMTAVQEASAVVE 266
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE 439
V ++ +P ++ VIG G I IR +GA + + E
Sbjct: 267 VQLRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHE 304
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 172/396 (43%), Gaps = 77/396 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT----------TERAVMISA 181
R+LVPA +G +IGR+GE I+ I ++T A IK+ +G G +R + ++A
Sbjct: 269 LRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGSQGARAFPPSEKKGVDRVITVAA 328
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS------ 235
E +++ P + + L + PSG ++LVP Q G+
Sbjct: 329 AEAAGAAVSPTEEAVC---------LMALCLLGPSGLPPVPCIRILVPTPQGGTAEALSL 379
Query: 236 -----LIGKQGGTVKSIQEASNCIVRV--LGAED---LP--VFALQDDRVVEVVGDASGV 283
++GK G T+ +++ S VR+ L AED LP V A Q +VV++ G +
Sbjct: 380 LQVGGVLGKGGATITQVRKDSGAGVRLVPLEAEDDRWLPRDVAAGQMHKVVQIEGPITAT 439
Query: 284 HKAMELIGSHLRKFLVDRS-----IIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGG 338
KA+ + + LR + RS L E + PQ H P Q+ P + P G
Sbjct: 440 VKAVRAVCAQLRAWQA-RSQGAQPARELTEAYGGAHAPQQFH-PMHQAMLPRETAPGLRG 497
Query: 339 PGY-----GHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQ 393
G Y P R E P L P++ Q + + G+ A
Sbjct: 498 RGLPDLSRAEMGMYDSPLRHCE--RPVLQLRHPLDLQ----VLSRGQ--------MDRAM 543
Query: 394 STPSMITQVTQQ------------MQIPLSYADAVIGTAGASISYIRRSSGATVTIQET- 440
S P M+ QVTQQ +++ V+G AG +I+ IR+ SGA V + +
Sbjct: 544 SQPLMMQQVTQQVVTAPDQTQSCELRLVGVQVGCVLGKAGENITQIRKISGARVKLSDAP 603
Query: 441 RGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
RGV E + +SGT QVQ A L+Q F+ A S
Sbjct: 604 RGVT-ERLLRLSGTCEQVQAAVNLVQAFLLAGRAGS 638
>gi|225681071|gb|EEH19355.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 495
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 153/365 (41%), Gaps = 42/365 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQ-------- 190
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 191 --DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 249 SGA---RLNASD-SCLPLSTERTLIILGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 311 --------------MQ----MPNPQMDHIPPPQSWGP--PQGLPPSGGPGYG----HNPQ 346
MQ +P P P ++ PQG GYG H
Sbjct: 305 ATRSGGPAGVVPGGMQVVPYIPQPAGGQYGHPDTFKRHQPQGTRAVSTGGYGVPYVHGQP 364
Query: 347 YMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI--TQVTQ 404
P Q +Y + P PHQ S YG P VHG+ ++Q ++ VTQ
Sbjct: 365 GQPQMPQQALHYGASSRPGYTGAGPHQP-SPYGAPQPSQVHGAPSSQPVGGVVPGAPVTQ 423
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
Q+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q A +
Sbjct: 424 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQMALYM 483
Query: 465 IQNFM 469
+ + +
Sbjct: 484 LYSRL 488
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 151/341 (44%), Gaps = 36/341 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+FR+L P +V I+G G ++ + + ++I D G+ E+ V+I+++E P ++
Sbjct: 332 IFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSEEGPNDTMF 391
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA + LL + IVD DS ++T+L+VP+S L GK ++ I+ +
Sbjct: 392 PAQEALLHIQTHIVDLSDS-----------IITTRLIVPSSDIECLDGK-NASLSEIERS 439
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ V++L E+LP D +V++VG+ + + + LR + V R I+
Sbjct: 440 TGASVQILPREELPPCIANTDELVQIVGEIEAARNVILDVTAKLRSY-VYRDIL------ 492
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
Q D +PP P + S + + +S + + +
Sbjct: 493 ------QWDTVPPS---APLPSVEASSSNSMATVAETATANQNMQS------VAVALASK 537
Query: 371 PHQGISAYGREAPVNVHGS--SNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
G + G++ + + T S++T+ ++ IP ++ + + ++ I
Sbjct: 538 ESGGSTEMGKQKESDRRDDLPTGLNRTVSLVTRSILEVVIPEYAVPKLLAKSKSKLAQIS 597
Query: 429 RSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
SGA V + E R E ++ISGT Q + Q L+Q F+
Sbjct: 598 ELSGANVKLVEDRPDEKEKIIQISGTPEQAERGQSLLQGFI 638
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS--AKEEPESSL 189
+R+L + G +IG+ G IK I + T A I + + G ER + IS + +P+ +
Sbjct: 65 YRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEISDTRRRDPDGRM 124
Query: 190 P---PAMDGLLRVHKRIVD---GLDS--DSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
P PA + LL +H+R+++ G + D G G +VS++L+V GSL+GK G
Sbjct: 125 PQFSPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGSLLGKGG 184
Query: 242 GTVKSIQEASNCIVRVLGAED-LPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
++ ++ + +R+L + LP + +V+V GD V A +I S LR+
Sbjct: 185 KIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRLRE 240
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 225
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IPNNLIGYIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 343
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 344 ----NARLSSEKGMGCS 356
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 149/349 (42%), Gaps = 56/349 (16%)
Query: 128 GESVF--RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEP 185
G + F + LV ++ G IIG+ G IK E++ ARI I DG ER V ++
Sbjct: 42 GNTCFIDKGLVEQKEAGRIIGKGGAKIKSFREQSTARINISDG--SLPERIVTVNG---- 95
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTK--LLVPASQAGSLIGKQGGT 243
+D + + K I LD D + + + + K LL+P S+IGK GGT
Sbjct: 96 ------PIDAVCKAFKLICQKLDEDFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGT 149
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
VK I+E++ V + + LP DRV+ + G +S + K ++ + L +
Sbjct: 150 VKEIRESTGAQVSI-ASNVLPN---SSDRVMTITGSSSAISKCIQRLSQLLSEL------ 199
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGP-PQGLPPSGG-PGYGHNPQY-----MPPPRQAES 356
P H+P + P P +PP+ G H + P P A+
Sbjct: 200 ------------PLGQHVP----YQPKPPNVPPTAFQNGQVHELTFAVPGPFPIPPHAQL 243
Query: 357 YYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416
Y P P P+ Q I+ Y + P V + +A S + TQ ++IP +
Sbjct: 244 PYGP---PVPVITQ----IAPYSVDIPSIVTQNFSAMSNGGTFARSTQLLKIPHDLIGCI 296
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
IG G I+ IR+ SGA + I G V ISGT + AQ LI
Sbjct: 297 IGRGGVKINEIRQISGANIKIASPNGDTTGRQVTISGTPESISAAQYLI 345
>gi|297610937|ref|NP_001065407.2| Os10g0564000 [Oryza sativa Japonica Group]
gi|255679638|dbj|BAF27244.2| Os10g0564000 [Oryza sativa Japonica Group]
Length = 100
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 61/83 (73%)
Query: 384 VNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGV 443
V + SS T + TQ+TQ MQIPL+YA+ +IG GA+I+YIR +SGA VTIQE+ G
Sbjct: 9 VQIFISSYCLLTRTRGTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGS 68
Query: 444 PGEMTVEISGTASQVQTAQQLIQ 466
P ++TVE+ GT+SQVQ A QLIQ
Sbjct: 69 PDDITVEMKGTSSQVQAAYQLIQ 91
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 166/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMPPP------RQ 353
E Q P ++ IP P P + +GG GY H + P Q
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 225
Query: 354 AESYYPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
+ P DL + +Q +G + SS + TQ T ++
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDASTQTTHELT 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 343
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 344 ----NARLSSEKGMGCS 356
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 156/349 (44%), Gaps = 50/349 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 209
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD--- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 210 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 363 -LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVI 417
PP + P + + + E N+ G SS ++P T ++ IP +I
Sbjct: 253 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCII 309
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 310 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 291 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 225
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG G++I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IPNNLIGCIIGRQGSNINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 343
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 344 ----NARLSSEKGMGCS 356
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 156/348 (44%), Gaps = 50/348 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 97
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 98 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 156 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP-- 209
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD---- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 210 ------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 253
Query: 363 LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
PP + P + + + E N+ G SS ++P T ++ IP +IG
Sbjct: 254 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCIIG 310
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 311 RQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 291 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP + L H + G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 11 SVLPHSTLSALSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 70
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 71 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 156/349 (44%), Gaps = 50/349 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 209
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD--- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 210 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 363 -LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVI 417
PP + P + + + E N+ G SS ++P T ++ IP +I
Sbjct: 253 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCII 309
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 310 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
LP + G L H + G +S + G ++ +LL+ + GS+IGK+G TVK ++
Sbjct: 13 LPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
E S + + + P +R+V + G + KA +I + +++
Sbjct: 73 EESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 291 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 156/349 (44%), Gaps = 50/349 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 46 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 96
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 97 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 153
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 154 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 208
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD--- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 209 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 251
Query: 363 -LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVI 417
PP + P + + + E N+ G SS ++P T ++ IP +I
Sbjct: 252 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCII 308
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 309 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 357
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 290 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 343
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 156/349 (44%), Gaps = 50/349 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 209
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD--- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 210 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 363 -LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVI 417
PP + P + + + E N+ G SS ++P T ++ IP +I
Sbjct: 253 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCII 309
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 310 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 291 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP + L H + G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 11 SVLPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 70
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 71 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
>gi|295673384|ref|XP_002797238.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282610|gb|EEH38176.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 495
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 153/365 (41%), Gaps = 42/365 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQ-------- 190
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 191 --DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 249 SGA---RLNASD-SCLPLSTERTLIILGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 311 --------------MQ----MPNPQMDHIPPPQSWGP--PQGLPPSGGPGYG----HNPQ 346
MQ +P P P ++ PQG GYG H
Sbjct: 305 ATRSGGPAGVVPGGMQVVPYIPQPAGGQYGHPDTFKRHQPQGTRAVSTGGYGVPYVHGQP 364
Query: 347 YMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI--TQVTQ 404
P Q +Y + P PHQ S YG P VHG+ ++Q ++ VTQ
Sbjct: 365 GQPQMPQQALHYGASSRPGYTGAGPHQP-SPYGAPQPGQVHGAPSSQPVGGVVPGAPVTQ 423
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
Q+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q A +
Sbjct: 424 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQMALYM 483
Query: 465 IQNFM 469
+ + +
Sbjct: 484 LYSRL 488
>gi|452837822|gb|EME39763.1| hypothetical protein DOTSEDRAFT_74610 [Dothistroma septosporum
NZE10]
Length = 490
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 158/380 (41%), Gaps = 50/380 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + +I A+ + + G ER + +S
Sbjct: 128 VRAIISSAEAATVIGKGGENVTQIRRMAGAKCTVSEYTRGAVERILTVSG---------- 177
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+ + PS K +LL+P GS+IGKQG ++ IQEA
Sbjct: 178 LVDAVAKAFGLIIRTLNQEPLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEA 237
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
S R+ +E L +R + V+G A VH A +GS L + L +R
Sbjct: 238 SGA--RLNASES--CLPLSTERSLVVLGVADAVHIATYYVGSTLVEQLTERFGGPAASNY 293
Query: 302 ---------------SIIPLFEMHM--QMPNPQMDHIPPPQSWGPPQGLP--PSGGPGYG 342
++P H QM +P + + PQ P P GG Y
Sbjct: 294 AGRHGGPQGVVPGGMQVVPYVPQHAGGQMGHPDYNR---NKQHAQPQRTPAQPYGGQQYM 350
Query: 343 HNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI--T 400
+PP + Y + P + P Q YG AP H Q M+
Sbjct: 351 QGQTPLPPQQAPMGYGAGSPRAPYVGAGPQQP-QPYGHAAP-QAHAGPPQQPMQGMVPGQ 408
Query: 401 QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQT 460
+TQQ+ IP A+IG GA I+ IR+ SG+ + I E + E V I+GT Q
Sbjct: 409 PITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQM 468
Query: 461 AQQLIQNFMAEAAAPSQAQM 480
A ++ + + E++ S + M
Sbjct: 469 ALYMLYSRLGESSKNSNSAM 488
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 156/349 (44%), Gaps = 50/349 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 209
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD--- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 210 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 363 -LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVI 417
PP + P + + + E N+ G SS ++P T ++ IP +I
Sbjct: 253 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCII 309
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 310 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP + L H + G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 11 SILPHSTLSTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 70
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 71 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 291 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 169/378 (44%), Gaps = 61/378 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + ++
Sbjct: 175 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT------- 225
Query: 191 PAMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKS 246
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K
Sbjct: 226 ---NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 282
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 283 IRESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVM 326
Query: 307 FEMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 327 LETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSI 384
Query: 358 -----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQM 406
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 385 QGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHEL 444
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLI 465
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 445 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI 503
Query: 466 QNFMAEAAAPSQAQMGAS 483
++ S+ MG S
Sbjct: 504 NARLS-----SEKGMGCS 516
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P +G +IG+ G I +I +++ A IK+ + + IS KE + S
Sbjct: 13 EFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTKEFFDDS 72
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ +R+ R D ++ DS +T+LLVP+S+ G LIGK G + ++
Sbjct: 73 FSPTIEAAVRLQPRCSDKVERDSGIV------SFTTRLLVPSSRIGCLIGKGGTIITEMR 126
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ +R+L EDLP A +DD +V++ GD A+ + + L+ L D+
Sbjct: 127 RLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANLFDK 179
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 156/349 (44%), Gaps = 50/349 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 50 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 100
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 101 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 157
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 158 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 212
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD--- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 213 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 255
Query: 363 -LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVI 417
PP + P + + + E N+ G SS ++P T ++ IP +I
Sbjct: 256 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCII 312
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 313 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 361
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP G L H ++ G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 14 SVLPDGALGTLSHHPQLHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 73
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 74 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 120
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 294 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 347
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 151/350 (43%), Gaps = 47/350 (13%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G V+R+L P +GS+IG+ G+ I I E+RAR+K++D PG +R + I + +
Sbjct: 34 GLIVYRILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKE 93
Query: 188 S------------LPPAMDGLLRVHKRIVDGL----DSDSSHAPSGTGGKVSTKLLVPAS 231
L A D LL+VH I + + DSD K ++LVPAS
Sbjct: 94 DVDVDDDFNHTNPLCAAQDALLKVHAAISNAVASLGDSDKR-----LRDKEECQILVPAS 148
Query: 232 QAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP---VFALQDDRVVEVVGDASGVHKAME 288
Q+ ++IGK G T+K ++ + ++++ + A+ D + + G++ V KA+
Sbjct: 149 QSANIIGKAGATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDFDNFLLITGESEAVKKALF 208
Query: 289 LIGSHLRKFLVDRSIIPL--FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ 346
+ + + KF + IPL +P Q P G P+ P + +
Sbjct: 209 AVSAIMYKF-NPKEEIPLEATVPEPPPSIIIPSDVPIYQ----PGGFYPNAEPIV--SSR 261
Query: 347 YMPPPRQAESYYPPADLPPPMEKQPHQGIS--AYGREAPVNVHGSSNAQSTPSMITQVTQ 404
+PP A P ++ G S Y PV V N +I +V
Sbjct: 262 SVPPILGATHI-------PELQGYGDMGSSWPVYTSTLPV-VPSFGNVSRYEELIIRVL- 312
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
P VIG G++I IR++SGA + + +T+ E + ++ T
Sbjct: 313 ---CPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVTAT 359
>gi|453080702|gb|EMF08752.1| hypothetical protein SEPMUDRAFT_151698 [Mycosphaerella populorum
SO2202]
Length = 518
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 161/383 (42%), Gaps = 54/383 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + +I + A+ + + G ER + +S +
Sbjct: 154 VRAIISSAEAATVIGKGGENVSQIRKLAGAKCTVSEYTRGAVERVLTVSGQ--------- 204
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+ + PS K +LL+P GS+IGKQG ++ IQEA
Sbjct: 205 -VDAVAKAFGLIIRTLNQEPLEEPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEA 263
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
S R+ +E L +R + V+G A VH A +GS L + L DR
Sbjct: 264 SGA--RLNASESC--LPLSTERSLVVLGVADAVHIATYYVGSTLVEQLTDRFGGPAASNY 319
Query: 302 ---------------SIIPLFEMH----MQMPNPQMDHIPPPQSWGPPQGLPPSGGPG-Y 341
++P + + P+ H PP S GPP P G P +
Sbjct: 320 AGRHGGPQGVVPGGMQVVPYVPQNTGGQVGQPDNNRRHNGPP-SRGPPV---PYGAPSMH 375
Query: 342 GHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ 401
G +P Y P Y + P PHQ YG AP G + P
Sbjct: 376 GQSP-YPQQPVAPVHYGAGSPRAPYAGAGPHQA-HPYGHAAPQPGPGHAGPPQQPVQGVG 433
Query: 402 ----VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQ 457
+TQQ+ IP A+IG GA I+ IR+ SG+ + I E + E V I+GT
Sbjct: 434 PGQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQEC 493
Query: 458 VQTAQQLIQNFMAEAAAPSQAQM 480
Q A ++ + + E++ S + M
Sbjct: 494 NQMALYMLYSRLGESSKNSNSIM 516
>gi|308798891|ref|XP_003074225.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116000397|emb|CAL50077.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 402
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 166/395 (42%), Gaps = 81/395 (20%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI---SAKEE 184
G +VFR+L +VG +IGR+G+ ++ IV ET A++K+L ERAV+I A++
Sbjct: 14 GTAVFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDG 73
Query: 185 PESSLPPAMDGLLRVHK-----RIVDGLDSDSS--------------HAPSGTGGK---- 221
P + A +G RV + R V + D + G GG+
Sbjct: 74 PGDTC-AAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGR 132
Query: 222 ----VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCI-VRVLGAEDLPVFALQDDRVVEV 276
V+ +LLVPA QAG LIGK G ++ +++ +N V V +P A +DRVVE+
Sbjct: 133 STAHVTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVEI 192
Query: 277 VGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWG-------P 329
G V A + + L+ +LVD S++ ++ + P + G
Sbjct: 193 HGKPKDVRVAADAVFESLKDYLVDSSVLGHYQPTVAAPAGANVGDVGATAMGIGNHPMSA 252
Query: 330 PQGLPPSGGPGYGHNPQ-----YMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPV 384
P G+ P G G P MP Q + PA +PP
Sbjct: 253 PMGMAPVGMAPVGMAPGTMMIPVMPMMTQMQPGMQPAGMPP------------------- 293
Query: 385 NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
VH S ++I V+G GA+IS I + SG V++ ET
Sbjct: 294 -VHDS----------------VEIDGEKVANVLGEHGANISTIAQISGCQVSLIETNPDT 336
Query: 445 GEMTVEISG-TASQVQTAQQLIQNFMAEAAAPSQA 478
VE+SG S + A+ L++ F P+QA
Sbjct: 337 NLSEVELSGPHESNIAAAKSLVRAFAEGEMMPAQA 371
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 156/347 (44%), Gaps = 50/347 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP-- 177
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD---- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 178 ------------YRPKPAST----PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 363 LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
PP + P + + + E N+ G SS ++P T ++ IP +IG
Sbjct: 222 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCIIG 278
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 279 RQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLI 325
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 259 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 156/347 (44%), Gaps = 50/347 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP-- 177
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD---- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 178 ------------YRPKPAST----PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 363 LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
PP + P + + + E N+ G SS ++P T ++ IP +IG
Sbjct: 222 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCIIG 278
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 279 RQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLI 325
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 259 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 156/348 (44%), Gaps = 50/348 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 73 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 122
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 123 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 180
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 181 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP-- 234
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD---- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 235 ------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 278
Query: 363 LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
PP + P + + + E N+ G SS ++P T ++ IP +IG
Sbjct: 279 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCIIG 335
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G I+ IR+ SGA + I E + I+G+ + + AQ LI
Sbjct: 336 RQGTKINEIRQMSGAQIKIANATEGSSERQITITGSPANISLAQYLIN 383
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 316 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 369
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 156/348 (44%), Gaps = 50/348 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 61 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 110
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 111 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 168
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 169 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP-- 222
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD---- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 223 ------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 266
Query: 363 LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
PP + P + + + E N+ G SS ++P T ++ IP +IG
Sbjct: 267 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCIIG 323
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 324 RQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 371
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 304 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 357
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 154/345 (44%), Gaps = 34/345 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHI-----PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 179 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 233
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAG 421
+P P + HQ ++ P+ HG++ + Q T ++ IP +IG G
Sbjct: 234 IPQPDLTKLHQ-LAMQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQG 291
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
A I+ IR+ SGA + + V I+G+A+ + AQ LI
Sbjct: 292 AKINEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLIN 336
>gi|406608142|emb|CCH40576.1| Poly(rC)-binding protein 2 [Wickerhamomyces ciferrii]
Length = 457
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 166/398 (41%), Gaps = 49/398 (12%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE 174
A+ S + G P FRML ++ ++G+ GE I I E + RI + + G TE
Sbjct: 72 AISSHKVHQDGDPTYVHFRMLCQVKEAALVVGKGGEKISHIKEVSGTRINVSENIRGVTE 131
Query: 175 RAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQA 233
R + + P ++ A + R I+D + + PS + +LL+P
Sbjct: 132 RVIHVRG---PAENVAKAFGLMTRA---ILD----EEENVPSTVDSHHFALQLLIPHQVI 181
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIG-- 291
G +IGKQGG K I+E S + + +P DR + + G A +H A +
Sbjct: 182 GYVIGKQGGKFKEIEENSAAKLNA-SSHSMP---FSTDRCLTIAGVADSIHIATYYVAQT 237
Query: 292 --SHLRKFLVDRSIIPLFE-------------MHMQMPNPQMDHIPPPQSWGPPQGLPPS 336
+H F + + ++ H+ +P + H P PP L +
Sbjct: 238 VLTHKPNF---KGKVIFYDPGQQHQHHQQQQQQHLNLPQHHLQHHQP---GLPPNPLLFN 291
Query: 337 GGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISA----YGREAPVNVHGSSNA 392
G +G PQ+ RQ + + P + H G + P+N A
Sbjct: 292 GMMNFGQLPQF--DQRQLLQF---NNFARPQHNRNHNGKFQQRPPFSMNVPINPLTLPLA 346
Query: 393 QSTPSM--ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVE 450
ST + Q+TQ++ IP Y VIG +G +I I+ +SG+ + I + E +
Sbjct: 347 SSTGGVGGSPQITQEIFIPNEYVGNVIGKSGKNIKLIKDTSGSKIQIADPNPESKERKIT 406
Query: 451 ISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGY 488
+ GT++ QTA LI N + ++A+ ++A Q +
Sbjct: 407 LVGTSAGNQTAIFLINNRIESDKRSNEAKAKSAAPQNH 444
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 163/384 (42%), Gaps = 76/384 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + ++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMPNPQMDHIPPPQ-------------SWGPPQGLPPSGGPGYGHNPQYMPPPRQA 354
E + P + P P S G P P NP PP +A
Sbjct: 168 ESPKGVTIP---YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEA 224
Query: 355 ESYYPPADLPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNAQS 394
+ +P P + HQ G S +P V G ++AQ+
Sbjct: 225 YTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWAGLDASAQT 283
Query: 395 TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
T + ++ IP +IG GA I+ IR+ SGA + I + V I+G+
Sbjct: 284 T-------SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGS 336
Query: 455 ASQVQTAQQLIQNFMAEAAAPSQA 478
A+ + AQ LI + A SQA
Sbjct: 337 AASISLAQYLINVSLENAKPSSQA 360
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 159/373 (42%), Gaps = 74/373 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMP--NPQMDHIPPPQ-------------SWGPPQGLPPSGGPGYGHNPQYMPPPR 352
E Q P + + P P S G P P NP PP
Sbjct: 168 ETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 227
Query: 353 QAESYYPPADLPPPMEKQPHQ---------------GISAYGREAPVNVHG----SSNAQ 393
+A + +P P + HQ G S +P V G ++AQ
Sbjct: 228 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWGLDASAQ 286
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
+T + ++ IP +IG GA I+ IR+ SGA + I + V I+G
Sbjct: 287 TT-------SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITG 339
Query: 454 TASQVQTAQQLIQ 466
+A+ + AQ LI
Sbjct: 340 SAASISLAQYLIN 352
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 146/358 (40%), Gaps = 77/358 (21%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-------------------M 348
+ ++ P + + P+ P +GG Y QY
Sbjct: 164 VVMLESPRKGVTVVVAPKPASTPVIF--AGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPF 221
Query: 349 PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQI 408
PP Q +P D P + P + A P + H ++ I
Sbjct: 222 PPLGQTNPAFPGTDRAVPFVRSPWACLDA---SPPASTH-----------------ELTI 261
Query: 409 PLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
P +IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 262 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 319
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 53/350 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 50 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 100
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 101 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 157
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 158 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 212
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESY-------- 357
+ P P S + +GG Y QY +P P + +
Sbjct: 213 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTP 255
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAV 416
+PP P P + + + E N+ G SS ++P T ++ IP +
Sbjct: 256 FPPLGQTNP--AFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCI 310
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 311 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 360
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
LP + G L H + G +S + G ++ +LL+ + GS+IGK+G TVK ++
Sbjct: 16 LPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 75
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
E S + + + P +R+V + G + KA +I + +++
Sbjct: 76 EESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 120
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 293 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 346
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 53/350 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 209
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESY-------- 357
+ P P S + +GG Y QY +P P + +
Sbjct: 210 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTP 252
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAV 416
+PP P P + + + E N+ G SS ++P T ++ IP +
Sbjct: 253 FPPLGQTNP--AFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCI 307
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 308 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 357
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 290 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 343
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 53/350 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 209
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESY-------- 357
+ P P S + +GG Y QY +P P + +
Sbjct: 210 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTP 252
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAV 416
+PP P P + + + E N+ G SS ++P T ++ IP +
Sbjct: 253 FPPLGQTNP--AFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCI 307
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 308 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 357
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 290 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 343
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 156/341 (45%), Gaps = 55/341 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
E Q P P+ IP P S P + +GG Y QY +P
Sbjct: 168 ETLSQSP-PKGVTIPYRPKPSSSP---VIFAGGQAYTIQGQY--------------AIPQ 209
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAGASI 424
P + HQ ++ P+ HG++ + Q T ++ IP +IG GA I
Sbjct: 210 PDLTKLHQ-LAMQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 267
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 268 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 308
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 53/350 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 209
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESY-------- 357
+ P P S + +GG Y QY +P P + +
Sbjct: 210 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTP 252
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAV 416
+PP P P + + + E N+ G SS ++P T ++ IP +
Sbjct: 253 FPPLGQTNP--AFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCI 307
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 308 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 357
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
LP + G L H + G +S + G ++ +LL+ + GS+IGK+G TVK ++
Sbjct: 13 LPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
E S + + + P +R+V + G + KA +I + +++
Sbjct: 73 EESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 290 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 343
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 157/351 (44%), Gaps = 56/351 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ +E+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQY-MPPPRQAESYYPPAD- 362
+ ++ P P+ IP + P P +GG Y QY +P P Q + A
Sbjct: 164 VVMLESP-PKGATIP----YRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQ 218
Query: 363 ---LPPPMEKQPH---QGISAYGREAPVNVHGS-SNAQSTPSMITQVTQQMQIPLSYADA 415
PP + P + +S + E N+ G S ++P T ++ IP
Sbjct: 219 QTPFPPLGQTNPAFPGEKLSLHSSEEAQNLMGQPSGLDASPP---ASTHELTIPNDLIGC 275
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 276 IIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 326
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 259 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 53/350 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 209
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESY-------- 357
+ P P S + +GG Y QY +P P + +
Sbjct: 210 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTP 252
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAV 416
+PP P P + + + E N+ G SS ++P T ++ IP +
Sbjct: 253 FPPLGQTNP--AFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCI 307
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 308 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 357
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 290 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 343
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP + L H + G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 11 SVLPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 70
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 71 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 159/374 (42%), Gaps = 75/374 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMP--NPQMDHIPPPQ-------------SWGPPQGLPPSGGPGYGHNPQYMPPPR 352
E Q P + + P P S G P P NP PP
Sbjct: 168 ETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 227
Query: 353 QAESYYPPADLPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNA 392
+A + +P P + HQ G S +P V G ++A
Sbjct: 228 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWAGLDASA 286
Query: 393 QSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
Q+T + ++ IP +IG GA I+ IR+ SGA + I + V I+
Sbjct: 287 QTT-------SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 339
Query: 453 GTASQVQTAQQLIQ 466
G+A+ + AQ LI
Sbjct: 340 GSAASISLAQYLIN 353
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 147/354 (41%), Gaps = 44/354 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP--GTTERAVMISAKEEPESS 188
VFR+L GS+IG+KG ++ E R I+ PP ER V ISA E ESS
Sbjct: 276 VFRLLCSNNVAGSVIGKKGSIVRTF--EIRTGASIVFAPPLGQYEERIVTISAFENLESS 333
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA D ++ V RI + + + V+ +LL+ S L G +G + ++
Sbjct: 334 NSPAQDAVILVFTRIAEDHIRNGFQPATAVESPVTARLLITTSTLHLLTGNEGQVISELR 393
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR------KFLVDRS 302
+ S +++L E +P A +D VV++ G V A+ I S +R + L +
Sbjct: 394 QVSGADIQLLHGEPIP-NASDNDVVVQITGGYRCVENALRKITSIIRDNPLTNELLAEAK 452
Query: 303 IIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
I P F ++ + I +S P +PP Y Q ES+ +
Sbjct: 453 IKPSFPLNKDTVRSKF--ITRKKSSFPFARVPPQNAGVY----QAKKVTENGESHTNLIE 506
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
P G N +T +T T ++ + +V G G
Sbjct: 507 NVEP---------------------GRGNIVAT---VTNTTVEIIVSEHVFGSVYGEDGG 542
Query: 423 SISYIRRSSGATVTIQE--TRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAA 474
++ IR+ SGA VT+ + + G G V ISGT Q AQ L+Q F+ A A
Sbjct: 543 NLDRIRQISGADVTVFDPSSTGTSGGKVV-ISGTPDQTFAAQSLLQAFIQTAQA 595
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 18/171 (10%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE-- 183
PG+ FR++ + VG +IG G + ++ ET +I D GT +R +++
Sbjct: 35 LPGQIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSD 94
Query: 184 -------EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ E + A +G++RV R V GL+S+ G G+V KLL +SQ G++
Sbjct: 95 RKGIVLGDREMEVSNAQEGVVRVFDR-VWGLESE-----KGGNGEVYGKLLAHSSQVGAI 148
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
+GK G + +I+ S +RV A P A +D+ ++ + G++ V KA+
Sbjct: 149 VGKGGKNISNIRNNSGSNIRVCPA---PHCAAKDEELILITGESLAVKKAL 196
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 154/361 (42%), Gaps = 59/361 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RM++ ++ GSIIG+KG+ +KK E++ A+I I D ER V ++
Sbjct: 4 LRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDS--SCPERIVTVTGTT-------- 53
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK---VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
D + + I + D + + T V+ +L+VPASQ GSLIGK G +K I+
Sbjct: 54 --DQIFKAFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIR 111
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
E + ++V +E LP +R V V G A + + + I +
Sbjct: 112 ELTGASIQV-ASEMLPN---STERAVTVSGQADAITQCIYNICCVM-------------- 153
Query: 309 MHMQMPNPQMDHIP-PPQSWGPPQGLPPS-GGPGYG-HNPQYMPPPRQAESYYPPAD--- 362
++ P P+ IP P+ PP LP S GG + Q + PP + P
Sbjct: 154 --LESP-PKGATIPYRPKPCVPPVMLPSSCGGQAFSIQGQQILLPPSHPNATQPDVSPHC 210
Query: 363 --LPPPM------EKQPHQGISAYGREAPVNVHGSSNA--------QSTP-SMITQVTQQ 405
LPPP Q H I R+ ++ + A Q+ P + ++ T +
Sbjct: 211 VPLPPPCFISLRARLQTHSLICIIIRDVYPGMNAAMAAGIPQFAPRQAGPGANMSAQTHE 270
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
M IP +IG GA I+ IR+ SGAT+ I + V I G+ + AQ +I
Sbjct: 271 MTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADEGSSDRKVTIMGSLETIHAAQYMI 330
Query: 466 Q 466
Sbjct: 331 N 331
>gi|85111179|ref|XP_963814.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|28925551|gb|EAA34578.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|38566984|emb|CAE76284.1| related to hnRNP protein E2 [Neurospora crassa]
Length = 489
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 152/377 (40%), Gaps = 64/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + KI E + A+ + D G ER + +S
Sbjct: 127 VRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSG---------- 176
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ PS T K +LL+P GS+IGK G +K IQEA
Sbjct: 177 VVDAVAKAFGLIIRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEA 236
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A +GS L + L +R P +
Sbjct: 237 SGA---RLNASD-SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAY 292
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLP-----------PSGGPGYGHNPQYM----PPPRQAE 355
+S GP +P P+GG +G+ Y P PR
Sbjct: 293 AT------------RSGGPAASIPGGLQVVPYVPQPAGG-NFGNRDYYQRNRGPDPRSHH 339
Query: 356 SYYP---PADLPPPMEKQPHQGISAYGRE-------------APVNVHG-----SSNAQS 394
P PA P QP+ + + AP H ++
Sbjct: 340 GMPPSQYPAPYGAPHPAQPNPAVPMHYGAHAAGGYGAAAPHVAPHVGHAGPAPHAAGPHG 399
Query: 395 TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
P +TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V I+GT
Sbjct: 400 APVAGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGT 459
Query: 455 ASQVQTAQQLIQNFMAE 471
+ A L+ + E
Sbjct: 460 EECNRMALYLLYQRLGE 476
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 142/325 (43%), Gaps = 69/325 (21%)
Query: 123 WPGWPGESV-----FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+ G PG R+LV + VG+IIGR+G I++I + +RAR+ + G+ E+A
Sbjct: 135 FSGLPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKA 194
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ K+I+D + + A S G+++ K+L + G +
Sbjct: 195 ITIYGN--PENCTNAC--------KKILDVMQQE---AASTNKGEITLKILAHNNLIGRI 241
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + KA +I S LR+
Sbjct: 242 IGKGGNTIKRIMQDTDSKITVSSINDINSFNL--ERIITVKGTIENMSKAESMISSKLRQ 299
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPP--PQSWGPPQGLP-PSGGPG-YGHNPQYMPPPR 352
+E +Q PQ P P + G+ S GPG YG P P P
Sbjct: 300 S---------YENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGP--APYPY 348
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
Q + LP QG+ P+ TQ T + IP +
Sbjct: 349 Q-------SSLP------TQQGV--------------------PASDTQETTFLYIPNNS 375
Query: 413 ADAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R SGA+V I
Sbjct: 376 VGAIIGTKGSHIRNIIRFSGASVKI 400
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGPP-GTTERAVMISAKE 183
E+ F + +P VG+IIG KG I+ I+ + A +KI D P TER V I
Sbjct: 365 ETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIIG-- 421
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PES L K +G + + +++ ++LVP++Q G +IGK G
Sbjct: 422 SPESQWKAQ---YLIFEKMREEGYVAGTEDV------RLTIEILVPSTQVGRIIGKGGQN 472
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
V+ +Q + ++++ + P A +++ V ++G V A I
Sbjct: 473 VRELQRVTGSVIKLSEQQATPPSA-EEETTVHIIGPFFSVQSAQRRI 518
>gi|261195190|ref|XP_002623999.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239587871|gb|EEQ70514.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239610640|gb|EEQ87627.1| KH domain RNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327348926|gb|EGE77783.1| KH domain RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 496
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 153/369 (41%), Gaps = 50/369 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 140 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQ-------- 191
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 192 --DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 249
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 250 SGA---RLNASD-SCLPLSTERTLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 305
Query: 311 --------------MQMPNPQMDHIPPPQS--WGPPQGLP----------PSGGPG--YG 342
MQ+ + +IP P +G P +GG G Y
Sbjct: 306 ATRSGGPAGVVPGGMQV----VPYIPQPAGGQYGHPDTFKRHQPQANRAVSTGGYGVPYV 361
Query: 343 HNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI--T 400
H P +Y + P PHQ + YG P VHG+ AQ ++
Sbjct: 362 HGQPGQPQMPHQALHYGSSSRPGYTGAGPHQP-APYGAPQPTQVHGAPTAQPAGGVVPGA 420
Query: 401 QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQT 460
VTQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q
Sbjct: 421 PVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQM 480
Query: 461 AQQLIQNFM 469
A ++ + +
Sbjct: 481 ALYMLYSRL 489
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 159/392 (40%), Gaps = 90/392 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 57 LRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 104
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 105 STAAVFHAVSMIAFKLDEDLCSAPA-NGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 163
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 164 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 210
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 211 -------------------------------------------PPKGATIPYHPSLSLGT 227
Query: 367 MEKQPHQGISA---YGREAPVNV------HGSSNAQSTPSMITQV-------TQQMQIPL 410
+ +QG S YG P V G + ++PSM+ + +Q+ +P
Sbjct: 228 VLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPN 287
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 288 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 347
Query: 471 EAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A + S G++ P++ + P+ P
Sbjct: 348 TAKSTSGGTPGSAPTDLSAPFSPPLTALPTAP 379
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 154/345 (44%), Gaps = 34/345 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHI-----PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 179 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMSLNPDLEGPPLEAYTIQGQYA 233
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAG 421
+P P + HQ ++ P+ HG++ + Q T ++ IP +I G
Sbjct: 234 IPQPDLTKLHQ-LAMQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIRRQG 291
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
A I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 292 AKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 336
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 159/374 (42%), Gaps = 75/374 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 75
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 76 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 135
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 136 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 179
Query: 308 EMHMQMP--NPQMDHIPPPQ-------------SWGPPQGLPPSGGPGYGHNPQYMPPPR 352
E Q P + + P P S G P P NP PP
Sbjct: 180 ETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 239
Query: 353 QAESYYPPADLPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNA 392
+A + +P P + HQ G S +P V G ++A
Sbjct: 240 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWAGLDASA 298
Query: 393 QSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
Q+T + ++ IP +IG GA I+ IR+ SGA + I + V I+
Sbjct: 299 QTT-------SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 351
Query: 453 GTASQVQTAQQLIQ 466
G+A+ + AQ LI
Sbjct: 352 GSAASISLAQYLIN 365
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 97/178 (54%), Gaps = 13/178 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV-MISAKEEPE- 186
++V+R L P +K GSIIG+ GE K+I ET++ ++I + PG ER V M S EE
Sbjct: 18 DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNH 77
Query: 187 -----SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK---VSTKLLVPASQAGSLIG 238
+ PA+D L +VH +V D D G+ V+ ++LVP+ Q G +IG
Sbjct: 78 FGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIG 137
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFA--LQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +++++ +N +RV+ + LP A L D ++ ++G+ V +A+ + S L
Sbjct: 138 KGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVASLL 194
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 9/180 (5%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + PA+ VG +IG+ G FI +I +ET A I++ + + IS+KE E
Sbjct: 243 EFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ 302
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA++ +R+ +R + + D++ +ST+LLV +SQ G LIGK G + ++
Sbjct: 303 -SPAVNAAIRLQQRCSEKVGKDANDLA------ISTRLLVSSSQIGCLIGKGGAVISEMR 355
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR--KFLVDRSIIPL 306
+ +R+L ED+P A +D+ +V++ G KA+ + LR F +D ++ L
Sbjct: 356 SVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLL 415
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 152/366 (41%), Gaps = 90/366 (24%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 174 -------------------------------------------PPKGATIPYHPSLSLGT 190
Query: 367 MEKQPHQGISA---YGREAPVNVHG----SSNAQ--STPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V SS+A +TPSM+ TQ +Q+ +P
Sbjct: 191 VLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSMVPGLDPGTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPS 476
A + S
Sbjct: 311 TAKSTS 316
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 154/350 (44%), Gaps = 56/350 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D +++ S + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQY-MPPPRQAESYYPPADL 363
+ ++ P P+ IP + P P +GG Y QY +P P Q + A
Sbjct: 164 VVMLESP-PKGATIP----YRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQ 218
Query: 364 PPPME-------KQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADA 415
P P + + + E N+ G SS ++P T ++ IP
Sbjct: 219 QTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGC 275
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 276 IIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLI 325
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 259 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 97/178 (54%), Gaps = 13/178 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV-MISAKEEPE- 186
++V+R L P +K GSIIG+ GE K+I ET++ ++I + PG ER V M S EE
Sbjct: 10 DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNH 69
Query: 187 -----SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK---VSTKLLVPASQAGSLIG 238
+ PA+D L +VH +V D D G+ V+ ++LVP+ Q G +IG
Sbjct: 70 FGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIG 129
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFA--LQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +++++ +N +RV+ + LP A L D ++ ++G+ V +A+ + S L
Sbjct: 130 KGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVASLL 186
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 9/180 (5%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + PA+ VG +IG+ G FI +I +ET A I++ + + IS+KE E
Sbjct: 235 EFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ 294
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA++ +R+ +R + + D++ +ST+LLV +SQ G LIGK G + ++
Sbjct: 295 -SPAVNAAIRLQQRCSEKVGKDANDLA------ISTRLLVSSSQIGCLIGKGGAVISEMR 347
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR--KFLVDRSIIPL 306
+ +R+L ED+P A +D+ +V++ G KA+ + LR F +D ++ L
Sbjct: 348 SVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLL 407
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 97/178 (54%), Gaps = 13/178 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV-MISAKEEPE- 186
++V+R L P +K GSIIG+ GE K+I ET++ ++I + PG ER V M S EE
Sbjct: 43 DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNH 102
Query: 187 -----SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK---VSTKLLVPASQAGSLIG 238
+ PA+D L +VH +V D D G+ V+ ++LVP+ Q G +IG
Sbjct: 103 FGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIG 162
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFA--LQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +++++ +N +RV+ + LP A L D ++ ++G+ V +A+ + S L
Sbjct: 163 KGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVASLL 219
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 9/180 (5%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E + PA+ VG +IG+ G FI +I +ET A I++ + + IS+KE E
Sbjct: 268 EFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ 327
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
PA++ +R+ +R + + D++ +ST+LLV +SQ G LIGK G + ++
Sbjct: 328 -SPAVNAAIRLQQRCSEKVGKDANDLA------ISTRLLVSSSQIGCLIGKGGAVISEMR 380
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR--KFLVDRSIIPL 306
+ +R+L ED+P A +D+ +V++ G KA+ + LR F +D ++ L
Sbjct: 381 SVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLL 440
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 177/464 (38%), Gaps = 103/464 (22%)
Query: 69 TEDQVPEDHVPED--QVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGST------- 119
TED ED PED Q E + E + IVP+ + E Q +
Sbjct: 61 TEDINAEDIKPEDVAQAVEQNGAEPVQTDTIVPDAPSILETQPIQSTSGANGRPLSHSQQ 120
Query: 120 --EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
E W R + + +IIG+ GE + +I + A+ + D G ER +
Sbjct: 121 VDETNW------LHLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERIL 174
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSL 236
+S + +D + + IV L+ + APS + K +LL+P GS+
Sbjct: 175 TVSGQ----------VDAVSKAFGLIVRTLNQEDLEAPSTSTSKAYPMRLLIPHILIGSI 224
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G ++ IQEASN L A D + +R + V+G A VH A+ + L +
Sbjct: 225 IGKAGVRIREIQEASNA---KLNASDT-LLPNSGERSLVVLGVADAVHIAVYYVAQTLVE 280
Query: 297 FLVDRSIIPLFEMH----------------------------MQMPN------PQMD--- 319
L +R P + Q PN PQ
Sbjct: 281 QLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVPQPAGGQYQQPNNFRRQEPQRTPAH 340
Query: 320 -------HIPP-----PQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
H+ P P +G PQ +G PG H Y PP+Q Y P P P
Sbjct: 341 GGYGAAPHMQPGAPVHPSPYGQPQMPYGAGSPGRAH---YGGPPQQPGPYGAPQGAPVPH 397
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYI 427
P+Q PV++ G +TQQ+ IP A+IG GA I+ I
Sbjct: 398 GGPPNQ--------PPVSMPGQP-----------LTQQIFIPNDMVGAIIGKGGAKINEI 438
Query: 428 RRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
R+ SG+ + I E E V I+GT Q A ++ + + E
Sbjct: 439 RQLSGSVIKINEPTDNSNERLVTITGTQECNQMALYMLYSRLGE 482
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 164/395 (41%), Gaps = 63/395 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ P +S+
Sbjct: 19 TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---PTNSIF 73
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKS 246
A + + + H GG ++ +L+VPASQ GSLIGK G +K
Sbjct: 74 KAFTLICKKFEEWCSQF-----HDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + ++V +E LP +R V + G + + + + I + + + IP
Sbjct: 129 IREVTGASIQV-ASEMLPN---STERAVTISGTSEAITQCIYHICCVMLESPPKGATIP- 183
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGY-----------------GHNPQYMP 349
+ P PQ GP L +GG Y G NP
Sbjct: 184 -------------YRPKPQVGGP---LILAGGQAYTIQGNYAVPAHSDMGKLGSNPLAGL 227
Query: 350 PPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
PA+ P + G + + S+ + P+ Q T +M +P
Sbjct: 228 AALGLGGLATPANTG---GLNPAALAALAGSQ----LRTSNTNRQQPAANNQ-THEMTVP 279
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I +E G + T+ I+G V AQ LI
Sbjct: 280 NELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLIS 339
Query: 467 NFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSN 501
+ A +AQ + G P A+ + PSN
Sbjct: 340 MSVELQKANLEAQNTQTPGSGTTPGATGASASPSN 374
>gi|226292229|gb|EEH47649.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 495
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 152/365 (41%), Gaps = 42/365 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQ-------- 190
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 191 --DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 249 SGA---RLNASD-SCLPLSTERTLIILGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 311 --------------MQ----MPNPQMDHIPPPQSWGP--PQGLPPSGGPGYG----HNPQ 346
MQ +P P P ++ PQG GYG H
Sbjct: 305 ATRSGGPAGVVPGGMQVVPYIPQPAGGQYGHPDTFKRHQPQGTRAVSTGGYGVPYVHGQP 364
Query: 347 YMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI--TQVTQ 404
P Q +Y + P PHQ S YG VHG+ ++Q ++ VTQ
Sbjct: 365 GQPQMPQQALHYGASSRPGYTGAGPHQP-SPYGAPQQSQVHGAPSSQPVGGVVPGAPVTQ 423
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
Q+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q A +
Sbjct: 424 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQMALYM 483
Query: 465 IQNFM 469
+ + +
Sbjct: 484 LYSRL 488
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 148/355 (41%), Gaps = 73/355 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ +++GSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 25 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 72
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTG-GK--VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ D + R I L+ D G G+ V+ +L++PASQ GSLIGK G ++ I+
Sbjct: 73 STDAVFRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIR 132
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
E++ V+V G DL +R V V G + + I + +
Sbjct: 133 ESTGAQVQVAG--DL--LPNSTERAVTVSGVPDTIIHCVRQICAVI-------------- 174
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE--SYYPPADLPPP 366
+++P P Q+WG + H Y+PP S+ P PP
Sbjct: 175 --LEVPTES-----PTQAWG-----------AFPHQHGYLPPKMTLSLISWSPCTHQSPP 216
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQV-------------TQQMQIPLSYA 413
P G + P+ S + T ++T + +Q+ +P
Sbjct: 217 ---NPAVGKHWH----PIMTDAYSYWRPTTPLLTSLSLPPGLDTSSQNSSQEFLVPNDLI 269
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF 468
+IG G+ IS IR+ SGA + I E V I+G+ + AQ LI +
Sbjct: 270 GCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSERHVTITGSPVSITVAQYLITAW 324
>gi|340914749|gb|EGS18090.1| putative pab1-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 484
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 151/368 (41%), Gaps = 77/368 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + KI + + AR + D G ER + +S
Sbjct: 127 IRAVISSPEAATIIGKGGENVTKIRQMSGARCTVSDYQKGAVERILTVSG---------- 176
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ + PS K +LL+P GS+IGK G +K IQEA
Sbjct: 177 IVDAVAKAFGLIIRTLNNEPLNEPSNQHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEA 236
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
S L A D L +R + V+G A VH A +GS L + L +R
Sbjct: 237 SGA---RLNASD-SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGAAASAY 292
Query: 302 ---------------SIIPLF------------EMHMQMPNPQMDHIPPP---QSWGPPQ 331
+IP + P+P+ H+PPP Q +G P
Sbjct: 293 ATRSGGPVGAVPGGMQVIPYNPQPAGGHYGNRDAYYRARPDPRAHHMPPPPYAQPYGHPA 352
Query: 332 G--LPPSGGP-GYGHNPQYMPPPRQAESYYPPADLPPPMEKQP--HQGISAYGREAPVNV 386
P + P YG P A Y P + PP P H + +G+ V
Sbjct: 353 HPVHPAAAMPMHYGATP--------AAGYGPAPHVQPPHVGHPAAHPHVGPHGQP----V 400
Query: 387 HGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGE 446
G+ T +TQQ+ IP A+IG G I+ IR+ SG+ + I E + E
Sbjct: 401 AGAHMPGQT------ITQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNE 454
Query: 447 MTVEISGT 454
V I+GT
Sbjct: 455 RLVTITGT 462
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 159/368 (43%), Gaps = 67/368 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR----SI 303
+E++ V+V G + LP +R + + G + + ++ H+ +++
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVK----HICVVMLESPPKGVT 175
Query: 304 IPLFEMHMQMPNPQMDHIPPP-----QSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYY 358
IP P P + S G P P NP PP +A +
Sbjct: 176 IPY------RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 229
Query: 359 PPADLPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNAQSTPSM 398
+P P + HQ G S +P V G ++AQ+T
Sbjct: 230 GQYAIPQPDLTKLHQLAVQQSHFPMTHGNTGFSGIESSSP-EVKGYWAGLDASAQTT--- 285
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
+ ++ IP +IG GA I+ I + SGA + I T + V I+G+A+ +
Sbjct: 286 ----SHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTITGSAASI 341
Query: 459 QTAQQLIQ 466
AQ LI
Sbjct: 342 SLAQYLIN 349
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P +G +IG+ G I +I +E+ A IK+ + + +SAKE +
Sbjct: 154 EFSLRIVCPTGNIGGVIGKGGTIINQIRQESGAVIKVDSSTAEGDDCLITVSAKEFFDDQ 213
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ +R+ R + + DS +T+LLVP S+ G L+GK G + ++
Sbjct: 214 YSPTIEAAIRLQPRCSEKIARDSGLI------SFTTRLLVPTSRIGCLLGKGGVIINEMR 267
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+ + +R+LG ++LP A +DD +V++ GD A+ + LR DR
Sbjct: 268 KVTKANIRILGKDNLPKVASEDDEMVQISGDLDVAKDALTHVSRRLRANAFDR 320
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 219 GGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVG 278
G +V+ +L+VP+ Q G +IGK G V++I+ + +R+L E LP AL D +V++ G
Sbjct: 10 GHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALSTDELVQISG 69
Query: 279 DASGVHKAMELIGSHL 294
+ + V KA+ I + L
Sbjct: 70 EVAVVKKALYQIATRL 85
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 96/176 (54%), Gaps = 12/176 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEPES 187
E R+L ++ +GS+IG+ G ++++ ++T ARIK+ + + ER ++IS+ E P
Sbjct: 32 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAE 91
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ PA++ L+ +H ++ S+ H+ ST+L+VP+S+ G +IG+ G + +
Sbjct: 92 PISPAIEALILLHDKV--SAPSEKHHS--------STRLVVPSSKVGCIIGEGGKVITDM 141
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRS 302
+ + +RV D P + DD +V+V G + A+ I S LR + L D S
Sbjct: 142 RRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTLRDTS 197
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 381 EAPVNVHGSSNAQSTPSMITQV--TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQ 438
EA +HG + + S + T +++IP S +++G G +++ IR+ SGA + +
Sbjct: 398 EAAGQIHGREDYREPTSATGRFLSTIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLH 457
Query: 439 ETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
E E VEI GT Q + AQ L+Q F++
Sbjct: 458 EAHAGSSESVVEIQGTLDQAKAAQSLLQGFIS 489
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 69/325 (21%)
Query: 123 WPGWPGESV-----FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+ G PG R+LV + VG+IIGR+G I++I + TRAR+ + G+ E+A
Sbjct: 109 FAGLPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKA 168
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ K+I++ + ++++ G+++ K+L + G +
Sbjct: 169 ITIYGN--PENCTNAC--------KKILEVMQQEANNT---NKGEITLKILAHNNLIGRI 215
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + KA +I S LR+
Sbjct: 216 IGKGGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIDNMSKAESMISSKLRQ 273
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPP--PQSWGPPQGLP-PSGGPG-YGHNPQYMPPPR 352
+E +Q PQ P P + G+ S GPG YG P P P
Sbjct: 274 S---------YENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGP--APYPY 322
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
Q + LP QG+ P+ TQ T + IP +
Sbjct: 323 Q-------SSLP------TQQGV--------------------PASDTQETTFLYIPNNS 349
Query: 413 ADAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R SGA+V I
Sbjct: 350 VGAIIGTKGSHIRNIIRFSGASVKI 374
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGPP-GTTERAVMISAKE 183
E+ F + +P VG+IIG KG I+ I+ + A +KI D P TER V I
Sbjct: 339 ETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVG-- 395
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PES L K +G + + +++ ++LVP++Q G +IGK G
Sbjct: 396 SPESQWKAQ---YLIFEKMREEGYVAGTEDV------RLTIEILVPSTQVGRIIGKGGQN 446
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
V+ +Q + ++++ + P A +++ V ++G V A I
Sbjct: 447 VRELQRVTGSVIKLSEQQATPPSA-EEETTVHIIGPFFSVQSAQRRI 492
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 160/356 (44%), Gaps = 52/356 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPES 187
V ++L+P GSIIG+ G+ I + +++ RI++ D PGT ER ++I+
Sbjct: 23 VLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITG------ 76
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST------KLLVPASQAGSLIGKQG 241
++ G+ +V++ I++ + + + G + K++VP + AG +IGK G
Sbjct: 77 ----SIAGVRQVNRFILEKVSEEGKADKAIQYGVLDKNRNRQLKMIVPNAAAGVIIGKGG 132
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+K IQ+ S V+V ++ +A+ D+R++ V G+ + A ELI
Sbjct: 133 SNIKEIQDKSGAHVQV--SQKKAQYAI-DERILTVTGEFNERLTAWELI----------- 178
Query: 302 SIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGY--GHNPQYMPPPRQAESY-- 357
I E +PN + + S P G P+ Y G N P A SY
Sbjct: 179 -IWKCLEDINNLPNTSVSY-----SHVEPAGTLPALHSNYYGGGNANDRPMDSSAASYDP 232
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVI 417
Y P Q Q YG ++ + + + PS + ++ +P S A++
Sbjct: 233 YTSERYSPTQVTQDAQADRQYGMQS----YPPTARNNRPSSYGETVIKIPVPDSIIGAIL 288
Query: 418 GTAGASISYIRRSSGATVTIQETRG--VPG--EMTVEISGTASQVQTAQQLIQNFM 469
G G IS I+ SGA + + + RG +PG + V ++GT A +LI+ ++
Sbjct: 289 GKRGKVISDIQNISGAHIQVSQ-RGDYIPGTKDREVTVTGTNDAAHYADKLIKGYL 343
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 216 SGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVE 275
+ +G KV KLL+P AGS+IGK G + +Q S +R+ D F +RV+
Sbjct: 16 NSSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNND--TFPGTKERVIV 73
Query: 276 VVGDASGVHKAMELI 290
+ G +GV + I
Sbjct: 74 ITGSIAGVRQVNRFI 88
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 155/346 (44%), Gaps = 50/346 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPA---- 361
E Q P P+ IP P S P + +GG Y QY P + A
Sbjct: 168 ETLSQSP-PKGVTIPYRPKPSSSP---VIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 223
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIGTA 420
P GI + E G ++AQ+T + ++ IP +IG
Sbjct: 224 HFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTT-------SHELTIPNDLIGCIIGRQ 276
Query: 421 GASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 277 GAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 322
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 149/367 (40%), Gaps = 84/367 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 66 MRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGP--------- 116
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G +K IQ+A
Sbjct: 117 -LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDA 175
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S ++ +E + +RV+ V G A +H A IG+ L E
Sbjct: 176 SGA--KLNASEGM--LPGSTERVLSVAGVADAIHIATYYIGT------------ILIEAQ 219
Query: 311 MQMPN-PQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEK 369
+MP+ + P Q P QG S PGY H+ Y PP + PP L
Sbjct: 220 ERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPP------HNPPQQLQ----- 268
Query: 370 QPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRR 429
TQQ+ IP +IG G+ I+ IR
Sbjct: 269 ---------------------------------TQQIYIPNDLVGCIIGKGGSKINEIRH 295
Query: 430 SSGATVTIQE-------TRGVP----GEMTVEISGTASQVQTAQQLIQNFMA-EAAAPSQ 477
S + + I E G P GE V I+G + +Q A QL+ + + E +
Sbjct: 296 MSASQIKIMEPGATGLGPNGAPGGSEGERLVVITGQPANIQMAVQLLYHRLEQEKQKQLR 355
Query: 478 AQMGASA 484
AQ G S+
Sbjct: 356 AQQGGSS 362
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 149/367 (40%), Gaps = 84/367 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 66 MRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGP--------- 116
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G +K IQ+A
Sbjct: 117 -LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDA 175
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S ++ +E + +RV+ V G A +H A IG+ L E
Sbjct: 176 SGA--KLNASEGM--LPGSTERVLSVAGVADAIHIATYYIGT------------ILIEAQ 219
Query: 311 MQMPN-PQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEK 369
+MP+ + P Q P QG S PGY H+ Y PP + PP L
Sbjct: 220 ERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPP------HNPPQQLQ----- 268
Query: 370 QPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRR 429
TQQ+ IP +IG G+ I+ IR
Sbjct: 269 ---------------------------------TQQIYIPNDLVGCIIGKGGSKINEIRH 295
Query: 430 SSGATVTIQE-------TRGVP----GEMTVEISGTASQVQTAQQLIQNFMA-EAAAPSQ 477
S + + I E G P GE V I+G + +Q A QL+ + + E +
Sbjct: 296 MSASQIKIMEPGATGLGPNGAPGGSEGERLVVITGQPANIQMAVQLLYHRLEQEKQKQLR 355
Query: 478 AQMGASA 484
AQ G S+
Sbjct: 356 AQQGGSS 362
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 168/378 (44%), Gaps = 69/378 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I F
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI----------------F 163
Query: 308 EMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
+ ++ P P+ IP P S P + +GG Y QY +P
Sbjct: 164 VVMLESP-PKGVTIPYRPKPSSSP---VIFAGGQAYTIQGQY--------------AIPQ 205
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAGASI 424
P + HQ ++ P+ HG++ + Q T ++ IP +IG GA I
Sbjct: 206 PDLTKLHQ-LAIQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 263
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGAS- 483
+ IR+ SGA + I + V I+G+A+ + AQ LI ++ MG+S
Sbjct: 264 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSLVT----GGMGSSY 319
Query: 484 --ADQGYNPYASMYGSPP 499
AD P+ SPP
Sbjct: 320 NNADSSIIPFCC---SPP 334
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 147/344 (42%), Gaps = 68/344 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 97
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 98 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I ++ L
Sbjct: 156 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI-----------CVVMLE 200
Query: 308 EMHMQ----MPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
+Q +P+P + + P PP Q +P L
Sbjct: 201 AYTIQGQYAIPHPDLTKLHQLAMQQTP-----------------FPPLGQTNPAFPGEKL 243
Query: 364 PPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
P + E N+ G SS ++P T ++ IP +IG G
Sbjct: 244 P------------LHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCIIGRQGT 288
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 289 KINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 332
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 265 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 318
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 159/365 (43%), Gaps = 64/365 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMP-------PPRQAESYYPP 360
P P P + Q SG Y H M PP++A +
Sbjct: 179 -----RPKPSSS----PVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQ 229
Query: 361 ADLPPPMEKQPHQ---------------GISAYGREAPVNVHG----SSNAQSTPSMITQ 401
+P P + HQ G S +P V G ++AQ+T
Sbjct: 230 YAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSP-EVKGYWGLDASAQTT------ 282
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+ ++ IP +IG GA I+ IR+ SGA + I + V I+G+A+ + A
Sbjct: 283 -SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLA 341
Query: 462 QQLIQ 466
Q LI
Sbjct: 342 QYLIN 346
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 178/412 (43%), Gaps = 52/412 (12%)
Query: 77 HVPEDQVP---EDHVPEDQVPEDIVPE----DSQLQEKQENEVNLA----VGSTEKKWPG 125
H PE Q +D++P+ + D P ++ +Q N A VG
Sbjct: 266 HSPERQFAAAGDDYIPQRRQSSDRFPRGNYRNNNFSSRQSNYAEEAPAVPVGEN-----V 320
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEP 185
+ E VF++L PA K+ ++G + + E +++ D G+ E+ + IS++E P
Sbjct: 321 YTEELVFQILCPADKIVRVVGESQGILDLLQNEIGVDVRVSDPVTGSDEQIITISSEEAP 380
Query: 186 ESSLPPAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ PA + LL + +I+D L D D+ ++T+LLV + + L GK G+V
Sbjct: 381 DDPFFPAQEALLHIQTQIIDLLPDKDN---------LITTRLLVSSRDSVCLEGK-AGSV 430
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
I + V++L E++P A +D V+++ GD A LV+ ++
Sbjct: 431 SEISRLTGTSVQILAREEIPRCASINDVVIQITGDIRAARDA-----------LVELTL- 478
Query: 305 PLFEMHMQMPNPQMDHIPPPQS-WGPPQGLPPSGGPGYGHNP-QYMPPPRQAESYYPPAD 362
L HM Q + P S GP +G+ +N Q +
Sbjct: 479 -LLRSHMFKELSQKETPPASTSTTGPLEGVAGVMEVASSNNTIQSREGLTGSNLKLQQTS 537
Query: 363 LPPPMEKQ-----PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVI 417
P K+ G S + E PV +++ + P ++T+ T ++ +P + ++
Sbjct: 538 TILPQFKEGFGSVAKAGESEHREEVPV----TTSRMAVP-LVTRSTLEVVLPEAVVPKLV 592
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+ ++ I SGA+VT+ E R + + ISGT Q + AQ L+Q F+
Sbjct: 593 TKSRNKLAQISEWSGASVTLVEDRPEETQNIIRISGTPEQAERAQSLLQGFI 644
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 29/199 (14%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
K P + +R+L K G +IG+ G IK I + T A I + + PG ER + IS
Sbjct: 60 KSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDVERIIEIS 119
Query: 181 --AKEEPESSLP---PAMDGLLRVHKRIVDGLDSDSSHAPSGTGG--------------- 220
+ +P+ +P PA + L VH RI++ S G GG
Sbjct: 120 DNRRRDPDGRMPSFSPAQEALFNVHDRILE------SEPQFGYGGAQPEEEEDYGGVRPG 173
Query: 221 --KVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVV 277
+V T+L+V G L+GK G ++ ++ + +R+L E +LP + +V++V
Sbjct: 174 GGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIV 233
Query: 278 GDASGVHKAMELIGSHLRK 296
G+ S V A+ ++ S LR+
Sbjct: 234 GELSAVKNALLIVSSRLRE 252
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 69/325 (21%)
Query: 123 WPGWPGESV-----FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+ G PG R+LV + VG+IIGR+G I++I + TRAR+ + G+ E+A
Sbjct: 100 FSGLPGSGRQTDFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKA 159
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ K+I++ + ++++ G+++ K+L + G +
Sbjct: 160 ITIYGN--PENCTNAC--------KKILEVMQQEANNTNK---GEITLKILAHNNLIGRI 206
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + KA +I S LR+
Sbjct: 207 IGKGGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIDNMSKAESMISSKLRQ 264
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPP--PQSWGPPQGLP-PSGGPG-YGHNPQYMPPPR 352
+E +Q PQ P P + G+ S GPG YG P P P
Sbjct: 265 S---------YENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGP--APYPY 313
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
Q + LP QG+ P+ TQ T + IP +
Sbjct: 314 Q-------SSLP------TQQGV--------------------PASDTQETTFLYIPNNS 340
Query: 413 ADAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R SGA+V I
Sbjct: 341 VGAIIGTKGSHIRNIIRFSGASVKI 365
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGPP-GTTERAVMISAKE 183
E+ F + +P VG+IIG KG I+ I+ + A +KI D P TER V I
Sbjct: 330 ETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVG-- 386
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PES L K +G + + +++ ++LVP++Q G +IGK G
Sbjct: 387 SPESQWKAQ---YLIFEKMREEGYVAGTEDV------RLTIEILVPSTQVGRIIGKGGQN 437
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
V+ +Q + ++++ + P A +++ V ++G V A I
Sbjct: 438 VRELQRVTGSVIKLSEQQATPPSA-EEETTVHIIGPFFSVQSAQRRI 483
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 163/392 (41%), Gaps = 90/392 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+G +P Y+P L
Sbjct: 174 ----------------------PPKG-------------ATIP-------YHPSLSLGTV 191
Query: 367 MEKQPHQGISA---YGREAPVNV------HGSSNAQSTPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V G + ++PSM+ TQ +Q+ +P
Sbjct: 192 LLST-NQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A + S G++ P++ + P+ P
Sbjct: 311 TAKSTSGGTPGSAPTDLPAPFSPPLTALPTAP 342
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 152/350 (43%), Gaps = 52/350 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 30 LRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEG--SCPERITTITG---------- 77
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ D + R I L+ D + GT K V+ +L++PASQ GSLIGK G +K I
Sbjct: 78 STDAVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIKEI 137
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E + V+V G + LP +R V V G + + + I + + + + IP
Sbjct: 138 RETTGAQVQVAG-DLLPN---STERAVTVSGVPDAIIQCVRQICAVILESPPKGATIPYH 193
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
PN + P QG G YG Q Q S +P +
Sbjct: 194 ------PNLSLG----PVLLSANQGFSMQG--QYGGISQAEVAKLQQLSGHPVS------ 235
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYI 427
S+ G+ + +N+Q++ +Q+ +P +IG G+ IS I
Sbjct: 236 -------FSSLGQTPSIVAGLDTNSQNS-------SQEFLVPNDLIGCIIGRQGSKISEI 281
Query: 428 RRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQ 477
R+ SGA + I E V I+GT + AQ LI + A + SQ
Sbjct: 282 RQMSGAHIKIGNQTEGSAERHVTITGTPVSITLAQYLISACLETAKSTSQ 331
>gi|171687621|ref|XP_001908751.1| hypothetical protein [Podospora anserina S mat+]
gi|170943772|emb|CAP69424.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 148/365 (40%), Gaps = 65/365 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + KI + + A+ + D G ER + +S
Sbjct: 137 IRAVISSPEAATIIGKGGENVSKIRQSSGAKCTVSDYQKGAVERILTVSG---------- 186
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + I+ L+++ PS K +LL+P GS+IGK G +K IQEA
Sbjct: 187 VVDAAAKAFGLIIRTLNNEPLSEPSNQHSKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEA 246
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
S L A D +R + V G A VH A +GS L + L +R
Sbjct: 247 SGA---RLNASD-SCLPASSERSLVVTGVADAVHIATYYVGSTLLEQLNERFGGAAASAY 302
Query: 302 --------------SIIPLF------------EMHMQMPNPQMDHIPPPQSWGPPQGLPP 335
+++P + + P+P+ H+ PPQ++G
Sbjct: 303 ATRSGGPAAVTGGMTVVPYVPQPAGGNFGQRDHYNNRRPDPRAHHM-PPQAYG------- 354
Query: 336 SGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ-----PHQGISAY-GREAPVNVHGS 389
G P YG PQ P ++ A PH G + + G + HG
Sbjct: 355 -GAPQYGAYPQAAHPGPAVPMHFAGAQAAGGYGPAAPHMPPHAGHAGHVGPQPHTGPHGP 413
Query: 390 SNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTV 449
A S + +TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V
Sbjct: 414 QAAGSGGAAGGPMTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLV 473
Query: 450 EISGT 454
I+GT
Sbjct: 474 TITGT 478
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 160/392 (40%), Gaps = 90/392 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 174 -------------------------------------------PPKGATIPYHPSLSLGT 190
Query: 367 MEKQPHQGISA---YGREAPVNV------HGSSNAQSTPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V G + ++PSM+ TQ +Q+ +P
Sbjct: 191 VLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A + S G++ P++ + P+ P
Sbjct: 311 TAKSTSGGTPGSAPTDLPAPFSPPLTALPTAP 342
>gi|389641821|ref|XP_003718543.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
gi|351641096|gb|EHA48959.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
Length = 483
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 150/365 (41%), Gaps = 43/365 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + KI + + A+ + D G ER + +S
Sbjct: 128 IRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSG---------- 177
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ PS K +LL+P GS+IGK G +K IQEA
Sbjct: 178 IVDAVAKAFGLIIRTLNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEA 237
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A +GS L + L DR P +
Sbjct: 238 SGA---RLNASD-SCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAY 293
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY--MPPPRQAE----------SYY 358
+ +P P LP G YG+ Y P PR +
Sbjct: 294 ATRAGGPVGAVPGGMQVVP--YLPQPAGGNYGNRDNYGRRPDPRAGQMPPPAAHPYAPQN 351
Query: 359 PPADLPPPMEKQPHQGI--SAYGREAPV--------NVHGSSNAQSTPSM----ITQVTQ 404
P A P PH G AYG P VHG+ + M +TQ
Sbjct: 352 PYAPHQPNPAVPPHYGAQAGAYGAHVPAPHVGHAGPQVHGAPHQPMHGQMPGPGGASLTQ 411
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
Q+ IP A+IG G I+ IR+ SG+ + I E + E V I+GT + A +
Sbjct: 412 QIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTEECNRMALYM 471
Query: 465 IQNFM 469
+ + +
Sbjct: 472 LYSRL 476
>gi|325093144|gb|EGC46454.1| KH domain RNA binding protein [Ajellomyces capsulatus H88]
Length = 499
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 155/369 (42%), Gaps = 50/369 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQ-------- 190
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 191 --DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 249 SGA---RLNASD-SCLPLSTERTLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 311 --------------MQMPNPQMDHIPPPQS--WGPPQGL----PP------SGGPG--YG 342
MQ+ + ++P P +G P PP +GG G Y
Sbjct: 305 ATRSGGAAGVVPGGMQV----VPYVPQPAGGQYGHPDTFKRHQPPGNRVVSTGGYGVPYV 360
Query: 343 HNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI--T 400
H P +Y + P PHQ + YG P VHG +AQ ++
Sbjct: 361 HGQPGQPQMPHQALHYGSSSRPGYSGAGPHQP-APYGAPQPAPVHGGPSAQPAGGVVPGA 419
Query: 401 QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQT 460
VTQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q
Sbjct: 420 PVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQM 479
Query: 461 AQQLIQNFM 469
A ++ + +
Sbjct: 480 ALYMLYSRL 488
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 157/363 (43%), Gaps = 58/363 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHI-----PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 179 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 233
Query: 363 LPPPMEKQPHQ---------------GISAYGREAPVNVHG----SSNAQSTPSMITQVT 403
+P P + HQ G S +P V G ++AQ+T +
Sbjct: 234 IPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWGLDASAQTT-------S 285
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
++ IP +IG GA I+ IR+ SGA + I + V I+G+A+ + AQ
Sbjct: 286 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQY 345
Query: 464 LIQ 466
LI
Sbjct: 346 LIN 348
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 152/347 (43%), Gaps = 50/347 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D ++ S + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPADLPP 365
+ ++ P P+ IP P+ P + +GG Y QY +P P Q + A
Sbjct: 164 VVMLESP-PKGATIPYRPKPASAP--VIFAGGQAYSIQGQYAIPHPDQLTKLHQLAMQQT 220
Query: 366 PME-------KQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
P P + + + E N+ G S S + T ++ IP +IG
Sbjct: 221 PFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSAGMDASSQAS--THELTIPNDLIGCIIG 278
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
G I+ IR+ SGA + I E + I+G+ + + AQ LI
Sbjct: 279 RQGTKINEIRQMSGAQIKIASAMEGSAERQITITGSPANISLAQYLI 325
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 159/366 (43%), Gaps = 65/366 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMP-------PPRQAESYYPP 360
P P P + Q SG Y H M PP++A +
Sbjct: 179 -----RPKPSSS----PVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQ 229
Query: 361 ADLPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNAQSTPSMIT 400
+P P + HQ G S +P V G ++AQ+T
Sbjct: 230 YAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSP-EVKGYWAGLDASAQTT----- 283
Query: 401 QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQT 460
+ ++ IP +IG GA I+ IR+ SGA + I + V I+G+A+ +
Sbjct: 284 --SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISL 341
Query: 461 AQQLIQ 466
AQ LI
Sbjct: 342 AQYLIN 347
>gi|225563195|gb|EEH11474.1| KH domain RNA binding protein [Ajellomyces capsulatus G186AR]
gi|240275775|gb|EER39288.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 495
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 155/369 (42%), Gaps = 50/369 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQ-------- 190
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 191 --DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 249 SGA---RLNASD-SCLPLSTERTLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 311 --------------MQMPNPQMDHIPPPQS--WGPPQGL----PP------SGGPG--YG 342
MQ+ + ++P P +G P PP +GG G Y
Sbjct: 305 ATRSGGAAGVVPGGMQV----VPYVPQPAGGQYGHPDTFKRHQPPGNRVVSTGGYGVPYV 360
Query: 343 HNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI--T 400
H P +Y + P PHQ + YG P VHG +AQ ++
Sbjct: 361 HGQPGQPQMPHQALHYGSSSRPGYSGAGPHQP-APYGAPQPAPVHGGPSAQPAGGVVPGA 419
Query: 401 QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQT 460
VTQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q
Sbjct: 420 PVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQM 479
Query: 461 AQQLIQNFM 469
A ++ + +
Sbjct: 480 ALYMLYSRL 488
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 151/333 (45%), Gaps = 54/333 (16%)
Query: 139 QKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLR 198
++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L + + +
Sbjct: 4 KEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAGPTNAIFK 51
Query: 199 VHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCI 254
I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I+E++
Sbjct: 52 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 111
Query: 255 VRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMP 314
V+V G + LP +R + + G + + ++ I + + E Q P
Sbjct: 112 VQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVMLETLSQSP 155
Query: 315 NPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPH 372
P+ IP P S P + +GG Y QY +P P + H
Sbjct: 156 -PKGVTIPYRPKPSSSP---VIFAGGQAYTIQGQY--------------AIPQPDLTKLH 197
Query: 373 QGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSG 432
Q ++ P+ HG++ + + ++ IP +IG GA I+ IR+ SG
Sbjct: 198 Q-LAMQQSHFPMT-HGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 255
Query: 433 ATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
A + I + V I+G+A+ + AQ LI
Sbjct: 256 AQIKIANPVEGSTDRQVTITGSAASISLAQYLI 288
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 122/308 (39%), Gaps = 75/308 (24%)
Query: 56 SQVTKEQVTEDQLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLA 115
S + K+ + ++ E+ ++ E PE + I + + +K E +++ +
Sbjct: 8 SIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSS 67
Query: 116 V-GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTT 173
+ ST P R++VPA + GS+IG+ G IK+I E T A++++ D P +T
Sbjct: 68 MTNSTAASRP----PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 123
Query: 174 ERAVMISA--------------------------------KEEPESSLPPAMDG------ 195
ERA+ I+ + +P SS P G
Sbjct: 124 ERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSS-PVIFAGGQAYTI 182
Query: 196 ----------LLRVHKRIVDGLDSDSSHAPSGTGG------KVSTKLLVPASQAGSLIGK 239
L ++H+ + +H +G G S +L +P G +IG+
Sbjct: 183 QGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGR 242
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
QG + I++ S +++ PV DR V + G A+ + L ++L+
Sbjct: 243 QGAKINEIRQMSGAQIKIAN----PVEG-STDRQVTITGSAASI---------SLAQYLI 288
Query: 300 DRSIIPLF 307
+ S +P+
Sbjct: 289 NVSCLPVL 296
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 157/364 (43%), Gaps = 59/364 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHI-----PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 179 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 233
Query: 363 LPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNAQSTPSMITQV 402
+P P + HQ G S +P V G ++AQ+T
Sbjct: 234 IPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWAGLDASAQTT------- 285
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
+ ++ IP +IG GA I+ IR+ SGA + I + V I+G+A+ + AQ
Sbjct: 286 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 345
Query: 463 QLIQ 466
LI
Sbjct: 346 YLIN 349
>gi|336465527|gb|EGO53767.1| hypothetical protein NEUTE1DRAFT_119308 [Neurospora tetrasperma
FGSC 2508]
gi|350295174|gb|EGZ76151.1| eukaryotic type KH-domain (KH-domain type I) [Neurospora
tetrasperma FGSC 2509]
Length = 481
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 150/371 (40%), Gaps = 64/371 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + KI E + A+ + D G ER + +S
Sbjct: 127 VRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSG---------- 176
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ PS T K +LL+P GS+IGK G +K IQEA
Sbjct: 177 VVDAVAKAFGLIIRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEA 236
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A +GS L + L +R P +
Sbjct: 237 SGA---RLNASD-SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAY 292
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLP-----------PSGGPGYGHNPQYM----PPPRQAE 355
+S GP +P P+GG +G+ Y P PR
Sbjct: 293 AT------------RSGGPAASIPGGLQVVPYVPQPAGG-NFGNRDYYQRNRGPDPRSHH 339
Query: 356 SYYP---PADLPPPMEKQPHQGISAYGRE-------------APVNVHG-----SSNAQS 394
P PA P QP+ + + AP H ++
Sbjct: 340 GMPPSQYPAPYGAPHPAQPNPAVPMHYGAHAAGGYGAAAPHVAPHVGHAGPAPHAAGPHG 399
Query: 395 TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
P +TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V I+GT
Sbjct: 400 APVAGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGT 459
Query: 455 ASQVQTAQQLI 465
+ A L+
Sbjct: 460 EECNRMALYLL 470
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 57/260 (21%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P ++V+R+L P++K+G +IG+ G IK + EET+A+I + D PG+ ER ++I + E
Sbjct: 42 PVDTVYRILCPSRKIGGVIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKI 101
Query: 187 SS-------------------LPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKV 222
S A D LL+VH RIV+ G+ SD + G V
Sbjct: 102 SRNHNDHEDLTMENEQDIMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDN----ENGFV 157
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
+ +LLVP + G L+GK+G ++ ++ + +RVL A+ LP A+ D +V++
Sbjct: 158 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDV 217
Query: 283 VHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDH---IPPP---QSWGPPQG---- 332
KA+ + + L + NP+ D +P P QS+ PP G
Sbjct: 218 AKKALYEVSTLLHQ------------------NPRKDKPPSVPMPYSGQSFHPPGGPMKN 259
Query: 333 LPPSGGPGY-GHNPQYMPPP 351
LPP G P + HN + PP
Sbjct: 260 LPPLGSPMWPHHNSSHSIPP 279
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 152 IKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDS 211
+K + ++T A I + D + ER + +SA E + +D +L++ + D +
Sbjct: 335 VKVVQQDTGASIHVEDASAESDERVIRVSASEALWNPRSQTIDAILQLQNKTSDFSEK-- 392
Query: 212 SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDD 271
G ++T+LLVP+S+ G ++G+ G + ++ + +RV ++ P A +D+
Sbjct: 393 --------GTITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDE 444
Query: 272 RVVEVVGDASGVHKAMELIGSHLR 295
+V++ G A+ I S LR
Sbjct: 445 ELVQISGKFGVAKDALAEIASRLR 468
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VFR+L +VG +IG+ G + + ET A I I G ER + ++A E PES
Sbjct: 314 VFRILCNNDRVGGVIGKGGNIVTALQNETGATISIGPKVAGCDERLITVTASENPESRYS 373
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A ++ V R+V+ + S G VS +L+V +Q G L+GK G + +++A
Sbjct: 374 AAQKTVVLVFSRVVESVIEKGLDPGSSEGSPVSVRLVVSPNQVGCLLGKGGTIISEMRKA 433
Query: 251 SNCIVRVLGAED-LPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
++ +R++G + P ++D VVE++GD V ++ I LR L
Sbjct: 434 TSTSIRIIGRDQGNPKCVPENDHVVEILGDFLNVKDSIYHITGRLRDNL 482
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G +FR+L ++G IIG+ G IK + ++T A+I+I D P + +R + I S
Sbjct: 56 GHVLFRLLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQSS 115
Query: 188 SLPPAM----------DGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ + + L+RV +RI++ +SDS GG VS +LL S G++
Sbjct: 116 VVFSGIGSAIEVSKGQEALVRVFERILEVAAESDSV-----AGGLVSCRLLAEISSVGAV 170
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
IGK G TV+ I++ C V+VL + LP A ++ ++E+ GD S V K + + L
Sbjct: 171 IGKGGKTVEKIRKDCGCKVKVL-IDKLPACASSNEEMIEIEGDVSAVKKGLVAVSHRL 227
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 397 SMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
+ +T T ++ IP +V G G++++ +R+ SGA V + E R + + ISGT
Sbjct: 670 AFVTNTTVEIVIPEHTFGSVYGENGSNLARLRQFSGAKVIVHEPRLGTSDRIIVISGTPD 729
Query: 457 QVQTAQQLIQNFM 469
+ Q AQ L+ F+
Sbjct: 730 ETQAAQSLLHAFI 742
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 157/363 (43%), Gaps = 58/363 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 75
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 76 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 135
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 136 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 190
Query: 308 EMHMQMPNPQMDHI-----PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 191 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 245
Query: 363 LPPPMEKQPHQ---------------GISAYGREAPVNVHG----SSNAQSTPSMITQVT 403
+P P + HQ G S +P V G ++AQ+T +
Sbjct: 246 IPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWGLDASAQTT-------S 297
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
++ IP +IG GA I+ IR+ SGA + I + V I+G+A+ + AQ
Sbjct: 298 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQY 357
Query: 464 LIQ 466
LI
Sbjct: 358 LIN 360
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 147/344 (42%), Gaps = 68/344 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 97
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 98 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I ++ L
Sbjct: 156 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI-----------CVVMLE 200
Query: 308 EMHMQ----MPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
+Q +P+P + + P PP Q +P L
Sbjct: 201 AYTIQGQYAIPHPDLTKLHQLAMQQTP-----------------FPPLGQTNPAFPGEKL 243
Query: 364 PPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
P + E N+ G SS ++P T ++ IP +IG G
Sbjct: 244 P------------LHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCIIGRQGT 288
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 289 KINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 332
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP G L H ++ G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 11 SVLPHGALGTLSHHPQLHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 70
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 71 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 265 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 318
>gi|396482778|ref|XP_003841545.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
gi|312218120|emb|CBX98066.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
Length = 488
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 191/454 (42%), Gaps = 68/454 (14%)
Query: 58 VTKEQVTEDQLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVG 117
V E + + + +D D D V E+ V E+ P+ +VP+ + E Q +
Sbjct: 54 VKGEGIATEDIKQDGAQPDVDVVDAVAENGV-ENVQPDTVVPDAPSILETQPIQSTSGAN 112
Query: 118 ST---------EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG 168
E W R + + +IIG+ GE + +I + A+ + D
Sbjct: 113 GRPLSHNQQVDETNW------LHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDY 166
Query: 169 PPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLL 227
G ER + +S + +D + + IV L+ + PS + K +LL
Sbjct: 167 SRGAVERILTVSGQ----------VDAVSKAFGLIVRTLNQEDLETPSTSTSKAYPMRLL 216
Query: 228 VPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
+P GS+IGK G ++ IQEASN L A D + +R + V+G A VH A+
Sbjct: 217 IPHILIGSIIGKAGVRIREIQEASNA---KLNASDT-LLPNSGERSLVVLGVADAVHIAV 272
Query: 288 ELIGSHLRKFLVDR-----------------SIIPLFEMHMQ--MPNPQMDHIPPPQSWG 328
+ L + L +R +++P M +Q +P P PQ++
Sbjct: 273 YYVAQTLVEQLTERFGGPAASQYATRSGMAANVVP-GGMSVQPYVPQPAGGQYSHPQNFR 331
Query: 329 --PPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME---KQPHQGISA---YG- 379
P Q P GG G H PP Q Y P ++P + P+ G +A YG
Sbjct: 332 REPTQRTPAHGGYGAAHMHGGQPP--QPSPYGHP-NMPYGAGSPGRAPYGGPAAPTSYGG 388
Query: 380 --REAPVNVHGSSNAQ-STPSMITQ-VTQQMQIPLSYADAVIGTAGASISYIRRSSGATV 435
APV HGS+ Q + SM Q +TQQ+ IP A+IG GA I+ IR+ SG+ +
Sbjct: 389 HHAAAPV-AHGSTPMQPAVGSMPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSMI 447
Query: 436 TIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
I E E V I+GT Q A ++ + +
Sbjct: 448 KINEPTDNSNERLVTITGTQECNQMALYMLYSRL 481
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 155/341 (45%), Gaps = 55/341 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
E Q P P+ IP P S P + +GG Y QY +P
Sbjct: 168 ETLSQSP-PKGVTIPYRPKPSSSP---VIFAGGQAYTIQGQY--------------AIPQ 209
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAGASI 424
P + HQ ++ P+ HG++ + Q T ++ IP +IG GA I
Sbjct: 210 PDLTKLHQ-LAMQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 267
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
+ IR+ SGA + + V I+G+A+ + AQ LI
Sbjct: 268 NEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLI 308
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 153/366 (41%), Gaps = 90/366 (24%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+G +P Y+P L
Sbjct: 174 ----------------------PPKG-------------ATIP-------YHPSLSLGTV 191
Query: 367 MEKQPHQGISA---YGREAPVNV------HGSSNAQSTPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V G + ++PSM+ TQ +Q+ +P
Sbjct: 192 LLST-NQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPS 476
A + S
Sbjct: 311 TAKSTS 316
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 164/370 (44%), Gaps = 61/370 (16%)
Query: 139 QKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLR 198
++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L + + +
Sbjct: 4 KEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTGPTNAIFK 51
Query: 199 VHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCI 254
I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I+E++
Sbjct: 52 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 111
Query: 255 VRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMP 314
V+V G + LP +R + + G V + ++ I + + E Q P
Sbjct: 112 VQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVMLETLSQSP 155
Query: 315 NPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY-----YPP 360
++ IP P P + +GG GY H + PP A S P
Sbjct: 156 QGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 213
Query: 361 ADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQIPLSYAD 414
DL + +Q +G + SS ++ TQ T ++ IP +
Sbjct: 214 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIG 273
Query: 415 AVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
+IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI A
Sbjct: 274 CIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI-----NAR 327
Query: 474 APSQAQMGAS 483
S+ MG S
Sbjct: 328 LSSEKGMGCS 337
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 56 SQVTKEQVTEDQLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLA 115
S + K+ + ++ E+ ++ E PE + I + + +K E ++N +
Sbjct: 8 SIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSS 67
Query: 116 V-GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTT 173
+ ST P R++VPA + GS+IG+ G IK+I E T A++++ D P +T
Sbjct: 68 MTNSTAASRP----PVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 123
Query: 174 ERAVMIS 180
ERA+ I+
Sbjct: 124 ERAITIA 130
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G + FR+L P VG++IG+ G IK++ + T A+I++ + P G+ +R + I A+ + +S
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104
Query: 188 SLP---------------------PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
+ A L++V + + DSD+ V +L
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT----------VVCRL 154
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
L +S AG++IGK G V SI++ + C + + E+LP+ A DD +VEV G+A V KA
Sbjct: 155 LTESSHAGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKA 213
Query: 287 MELIGSHL 294
+ I L
Sbjct: 214 LVSISRCL 221
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF++L + G +IG G+ ++ + ET A I + + ER + ++A E PE
Sbjct: 453 VFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSS 512
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA ++ + R+ + + + +G ++ +L+VP SQ G ++GK G V +++
Sbjct: 513 PAQKAIMLIFSRLFEL--ATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ +++L E P ++D+VV++ G+ V +A+ I S LR + S+
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSM 623
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 397 SMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
+++T T ++++P + V G G ++ +R+ SGA V I E + + ISGT
Sbjct: 771 AIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPD 830
Query: 457 QVQTAQQLIQNFM 469
Q Q AQ L+ F+
Sbjct: 831 QTQAAQNLLHAFI 843
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 161/387 (41%), Gaps = 63/387 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ P +S+
Sbjct: 19 TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---PTNSIF 73
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKS 246
A + + + H G+GG ++ +L+VPASQ GSLIGK G +K
Sbjct: 74 KAFTLICKKFEEWCSQF-----HDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + ++V A D+ +R V + G + + + + I + + + IP
Sbjct: 129 IREVTGASIQV--ASDM--LPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIP- 183
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGY-----------------GHNPQYMP 349
+ P PQ GP + +GG Y G NP
Sbjct: 184 -------------YRPKPQVGGP---VILAGGQAYTIQGNYAVPAHSDMGKLGSNPLAGL 227
Query: 350 PPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
PA+ P + G + + S+ + P+ Q T +M +P
Sbjct: 228 AALGLGGLATPANTG---GLNPAALAALAGSQ----LRTSNTNRQQPAANNQ-THEMTVP 279
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I +E G + T+ I+G V AQ LI
Sbjct: 280 NELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQYLIS 339
Query: 467 NFMAEAAAPSQAQMGASADQGYNPYAS 493
+ A +AQ + G P AS
Sbjct: 340 MSVELQKANLEAQNTQTPGSGTTPGAS 366
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 164/392 (41%), Gaps = 90/392 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+G +P Y+P L
Sbjct: 174 ----------------------PPKG-------------ATIP-------YHPSLSLGTV 191
Query: 367 MEKQPHQGISA---YGREAPVNV------HGSSNAQSTPSMI------TQV-TQQMQIPL 410
+ +QG S YG AP V G + ++PS++ TQ +Q+ +P
Sbjct: 192 LLST-NQGFSVQGQYGAVAPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A + S G++ P++ + P+ P
Sbjct: 311 TAKSTSGGTPGSAPADLPTPFSPPLTALPTAP 342
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 157/351 (44%), Gaps = 58/351 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D ++ S + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP-- 177
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPADLPPP 366
+ P P S + +GG Y QY +P P Q + A
Sbjct: 178 ------------YRPKPAST----PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLA----- 216
Query: 367 MEKQPH----QGISAY-GREAPVNVHGSSNAQS----TPSMITQ---VTQQMQIPLSYAD 414
M++ P Q A+ G + P +H S AQ+ +P + T ++ IP
Sbjct: 217 MQQTPFPPLGQTTPAFPGEKLP--LHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIG 274
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 275 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLI 325
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G + FR+L P VG++IG+ G IK++ + T A+I++ + P G+ +R + I A+ + +S
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104
Query: 188 SLP---------------------PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
+ A L++V + + DSD+ V +L
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT----------VVCRL 154
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
L +S AG++IGK G V SI++ + C + + E+LP+ A DD +VEV G+A V KA
Sbjct: 155 LTESSHAGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKA 213
Query: 287 MELIGSHL 294
+ I L
Sbjct: 214 LVSISRCL 221
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF++L + G +IG G+ ++ + ET A I + + ER + ++A E PE
Sbjct: 453 VFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSS 512
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA ++ + R+ + + + +G ++ +L+VP SQ G ++GK G V +++
Sbjct: 513 PAQKAIMLIFSRLFEL--ATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ +++L E P ++D+VV++ G+ V +A+ I S LR + S+
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSM 623
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 157/364 (43%), Gaps = 59/364 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHI-----PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 179 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 233
Query: 363 LPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNAQSTPSMITQV 402
+P P + HQ G S +P V G ++AQ+T
Sbjct: 234 IPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWAGLDASAQTT------- 285
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
+ ++ IP +IG GA I+ IR+ SGA + I + V I+G+A+ + AQ
Sbjct: 286 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 345
Query: 463 QLIQ 466
LI
Sbjct: 346 YLIN 349
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G + FR+L P VG++IG+ G IK++ + T A+I++ + P G+ +R + I A+ + +S
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104
Query: 188 SLP---------------------PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
+ A L++V + + DSD+ V +L
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT----------VVCRL 154
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
L +S AG++IGK G V SI++ + C + + E+LP+ A DD +VEV G+A V KA
Sbjct: 155 LTESSHAGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKA 213
Query: 287 MELIGSHL 294
+ I L
Sbjct: 214 LVSISRCL 221
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF++L + G +IG G+ ++ + ET A I + + ER + ++A E PE
Sbjct: 465 VFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPECQSS 524
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA ++ + R+ + + + +G ++ +L+VP SQ G ++GK G V +++
Sbjct: 525 PAQKAIMLIFSRLFEL--ATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 582
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ +++L E P ++D+VV++ + V +A+ I S LR + S+
Sbjct: 583 TGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVFSNSM 635
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 397 SMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
+++T T ++++P + V G G ++ +R+ SGA V I E + + ISGT
Sbjct: 783 AIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPD 842
Query: 457 QVQTAQQLIQNFM 469
Q Q AQ L+ F+
Sbjct: 843 QTQAAQNLLHAFI 855
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G + FR+L P VG++IG+ G IK++ + T A+I++ + P G+ +R + I A+ + +S
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104
Query: 188 SLP---------------------PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
+ A L++V + + DSD+ V +L
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT----------VVCRL 154
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
L +S AG++IGK G V SI++ + C + + E+LP+ A DD +VEV G+A V KA
Sbjct: 155 LTESSHAGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKA 213
Query: 287 MELIGSHL 294
+ I L
Sbjct: 214 LVSISRCL 221
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF++L + G +IG G+ ++ + ET A I + + ER + ++A E PE
Sbjct: 453 VFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSS 512
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA ++ + R+ + + + +G ++ +L+VP SQ G ++GK G V +++
Sbjct: 513 PAQKAIMLIFSRLFEL--ATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ +++L E P ++D+VV++ G+ V +A+ I S LR + S+
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSM 623
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 397 SMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
+++T T ++++P + V G G ++ +R+ SGA V I E + + ISGT
Sbjct: 780 AIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPD 839
Query: 457 QVQTAQQLIQNFM 469
Q Q AQ L+ F+
Sbjct: 840 QTQAAQNLLHAFI 852
>gi|440469758|gb|ELQ38855.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482264|gb|ELQ62771.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 490
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 150/365 (41%), Gaps = 43/365 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + KI + + A+ + D G ER + +S
Sbjct: 128 IRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSG---------- 177
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ PS K +LL+P GS+IGK G +K IQEA
Sbjct: 178 IVDAVAKAFGLIIRTLNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEA 237
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A +GS L + L DR P +
Sbjct: 238 SGA---RLNASD-SCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAY 293
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY--MPPPRQAE----------SYY 358
+ +P P LP G YG+ Y P PR +
Sbjct: 294 ATRAGGPVGAVPGGMQVVP--YLPQPAGGNYGNRDNYGRRPDPRAGQMPPPAAHPYAPQN 351
Query: 359 PPADLPPPMEKQPHQGI--SAYGREAPV--------NVHGSSNAQSTPSM----ITQVTQ 404
P A P PH G AYG P VHG+ + M +TQ
Sbjct: 352 PYAPHQPNPAVPPHYGAQAGAYGAHVPAPHVGHAGPQVHGAPHQPMHGQMPGPGGASLTQ 411
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
Q+ IP A+IG G I+ IR+ SG+ + I E + E V I+GT + A +
Sbjct: 412 QIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTEECNRMALYM 471
Query: 465 IQNFM 469
+ + +
Sbjct: 472 LYSRL 476
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G + FR+L P VG++IG+ G IK++ + T A+I++ + P G+ +R + I A+ + +S
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104
Query: 188 SLP---------------------PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
+ A L++V + + DSD+ V +L
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT----------VVCRL 154
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
L +S AG++IGK G V SI++ + C + + E+LP+ A DD +VEV G+A V KA
Sbjct: 155 LTESSHAGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKA 213
Query: 287 MELIGSHL 294
+ I L
Sbjct: 214 LVSISRCL 221
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF++L + G +IG G+ ++ + ET A I + + ER + ++A E PE
Sbjct: 453 VFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSS 512
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA ++ + R+ + + + +G ++ +L+VP SQ G ++GK G V +++
Sbjct: 513 PAQKAIMLIFSRLFEL--ATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ +++L E P ++D+VV++ G+ V +A+ I S LR + S+
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSM 623
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 153/350 (43%), Gaps = 56/350 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D ++ S + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQY-MPPPRQAESYYPPADL 363
+ ++ P P+ IP + P P +GG Y QY +P P Q + A
Sbjct: 164 VVMLESP-PKGATIP----YRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQ 218
Query: 364 PPPME-------KQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADA 415
P P + + + E N+ G SS ++P T ++ IP
Sbjct: 219 QTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGC 275
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 276 IIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLI 325
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G + FR+L P VG++IG+ G IK++ + T A+I++ + P G+ +R + I A+ + +S
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104
Query: 188 SLP---------------------PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
+ A L++V + + DSD+ V +L
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT----------VVCRL 154
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
L +S AG++IGK G V SI++ + C + + E+LP+ A DD +VEV G+A V KA
Sbjct: 155 LTESSHAGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKA 213
Query: 287 MELIGSHL 294
+ I L
Sbjct: 214 LVSISRCL 221
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF++L + G +IG G+ ++ + ET A I + + ER + ++A E PE
Sbjct: 465 VFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPECQSS 524
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
PA ++ + R+ + + + +G ++ +L+VP SQ G ++GK G V +++
Sbjct: 525 PAQKAIMLIFSRLFEL--ATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 582
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ +++L E P ++D+VV++ + V +A+ I S LR + S+
Sbjct: 583 TGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVFSNSM 635
>gi|50311087|ref|XP_455567.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644703|emb|CAG98275.1| KLLA0F10703p [Kluyveromyces lactis]
Length = 417
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 153/364 (42%), Gaps = 37/364 (10%)
Query: 119 TEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVM 178
TEK P RML ++ ++G KGE + +I ET RI + D G ER +
Sbjct: 56 TEKDSGQVPNYINLRMLCLMKQASKVVGGKGERVNRIKSETNTRINVSDNINGVMERVIF 115
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+ K E + R +IV ++++S + + LL+P G +IG
Sbjct: 116 VRGKCEE----------VARAFGKIVRAINNESDDDSNERSLPLVVNLLIPHHFMGCIIG 165
Query: 239 KQGGTVKSIQEASNCIVRVLGA-EDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL--- 294
+QG + I++ S R++ + + LP + +DR++ + G A +H A IG +
Sbjct: 166 RQGSRLHEIEDLS--AARLMASPQQLP---MSNDRILSLTGVADAIHIATYYIGQTILEN 220
Query: 295 -RKFLVDRSII----PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMP 349
K +S+ P+ + + N QM I + PQ + P P H+ QY P
Sbjct: 221 ESKLKNKKSVFYHPGPMHSVLVN--NYQMYMIYSGGAPTNPQDITPMVAPHQEHH-QYHP 277
Query: 350 PPRQAESYYPPADLPPPMEKQ---PHQGISAYGREAPVNVHGSSNAQSTPSMIT---QVT 403
++ + PP+ K P Q + Y H +Q S I+ +
Sbjct: 278 MDKKTMNRRT----KPPVSKYPIGPQQSLQPYTDMVDSCKHVKIISQLQQSPISPHLVLP 333
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
Q++ I + VIG G +I I++S+G + I + E + + GT QTA
Sbjct: 334 QEVFIDNKFVGNVIGKGGKNIQQIKQSTGCMIKINDPVEGLDERKLVLIGTPLATQTAIM 393
Query: 464 LIQN 467
+I N
Sbjct: 394 MINN 397
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 147/344 (42%), Gaps = 68/344 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I ++ L
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI-----------CVVMLE 168
Query: 308 EMHMQ----MPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
+Q +P+P + + P PP Q +P L
Sbjct: 169 AYTIQGQYAIPHPDLTKLHQLAMQQTP-----------------FPPLGQTNPAFPGEKL 211
Query: 364 PPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
P + E N+ G SS ++P T ++ IP +IG G
Sbjct: 212 P------------LHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCIIGRQGT 256
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 257 KINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 300
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 53/364 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + I+
Sbjct: 130 LRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITITGPT-------- 179
Query: 192 AMDGLLRVHKRIVDGLDSD-SSHAPSGTGGK---VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + R I L+ D + +GT V+ +L++PASQ GSLIGK G +K I
Sbjct: 180 --DCVFRAFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEI 237
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E + V+V G + LP +R V + G + + ++LI + + + + IP
Sbjct: 238 RETTGAQVQVAG-DLLPN---STEREVTISGSQDAIIQCVKLICTVILESPPKGATIP-- 291
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY--------MPPPRQAESYY- 358
+ P P + Q + +G +P + + +S+Y
Sbjct: 292 --YRPSPTPGTVLLAGNQVF---------EASDFGSHPLFSVAQGGVDLQQTYAVQSHYG 340
Query: 359 -PPADLPPPME-KQPHQGISAYGREAPVNVHGS--SNAQSTPSMITQVTQQMQIPLSYAD 414
P ++L + QG++ + A + G +N+Q+T +Q++ IP
Sbjct: 341 IPHSELAKLHQLSMQQQGLAPISQSATQVLPGGVEANSQTT-------SQELLIPNDLIG 393
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAA 474
++IG G I+ IR+ SGA + I + V ISGT + AQ LI + + A +
Sbjct: 394 SIIGRQGTKINEIRQVSGAQIKIGSQIDSTSDRHVTISGTPIAINLAQYLITSCLETAKS 453
Query: 475 PSQA 478
+Q+
Sbjct: 454 TAQS 457
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 159/392 (40%), Gaps = 90/392 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 174 -------------------------------------------PPKGATIPYHPSLSLGT 190
Query: 367 MEKQPHQGISA---YGREAPVNV------HGSSNAQSTPSMITQV-------TQQMQIPL 410
+ +QG S YG P V G + ++PSM+ + +Q+ +P
Sbjct: 191 VLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A + S G++ P++ + P+ P
Sbjct: 311 TAKSTSGGTPGSAPTDLPAPFSPPLTALPTAP 342
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 145/339 (42%), Gaps = 52/339 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
+ ++ P + + P+ P +GG Y QY P + A M
Sbjct: 164 VVMLESPRKGVTVVVAPKPASTPVIF--AGGQAYTIQGQYAIPHPDLTKLHQLA-----M 216
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYI 427
++ P + P + S A T ++ IP +IG G I+ I
Sbjct: 217 QQTPFPPLGQTNPAFPAGLDASPPAS---------THELTIPNDLIGCIIGRQGTKINEI 267
Query: 428 RRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
R+ SGA + I E + I+GT + + AQ LI
Sbjct: 268 RQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 306
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 164/390 (42%), Gaps = 78/390 (20%)
Query: 94 PEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIK 153
P+ + D+ L+E+ E + L RML+ ++VGSIIG+KGE +K
Sbjct: 38 PDRMSSSDAGLEEEPELSITL----------------TLRMLMHGKEVGSIIGKKGETVK 81
Query: 154 KIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSH 213
+I E++ ARI I +G ER I+ + + I LD D
Sbjct: 82 RIREQSSARITISEG--SCPERITTITG----------STAAVFHAVSMIAFKLDEDLCA 129
Query: 214 APSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFAL 268
AP+ GG VS +L++PASQ GSLIGK G +K I+E + V+V G + LP
Sbjct: 130 APA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAG-DLLPN--- 184
Query: 269 QDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIP--PPQS 326
+R V V SGV A+ L R I + ++ P P+ IP P S
Sbjct: 185 STERAVTV----SGVPDAI---------ILCVRQICAVI---LESP-PKGATIPYHPSLS 227
Query: 327 WGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNV 386
G + S G+ QY PA++ + H A +P V
Sbjct: 228 LGT---VLLSANQGFSVQGQY--------GAVTPAEVTKLQQLSGH----AVPFASPSVV 272
Query: 387 HGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGE 446
G + T S Q+ +P VIG G+ IS IR+ SGA + I GE
Sbjct: 273 PGLDPSAQTSS------QEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGE 326
Query: 447 MTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
V I+G+ + AQ LI + A + S
Sbjct: 327 RHVTITGSPVSIALAQYLITACLETAKSTS 356
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 161/387 (41%), Gaps = 63/387 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ P +S+
Sbjct: 19 TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---PTNSIF 73
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKS 246
A + + + H G+GG ++ +L+VPASQ GSLIGK G +K
Sbjct: 74 KAFTLICKKFEEWCSQF-----HDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + ++V A D+ +R V + G + + + + I + + + IP
Sbjct: 129 IREVTGASIQV--ASDM--LPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIP- 183
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGY-----------------GHNPQYMP 349
+ P PQ GP + +GG Y G NP
Sbjct: 184 -------------YRPKPQVGGP---VILAGGQAYTIQGNYAVPAHSDMGKLGSNPLAGL 227
Query: 350 PPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
PA+ P + G + + S+ + P+ Q T +M +P
Sbjct: 228 AALGLGGLATPANTG---GLNPAALAALAGSQ----LRTSNTNRQQPAANNQ-THEMTVP 279
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I +E G + T+ I+G V AQ LI
Sbjct: 280 NELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLIS 339
Query: 467 NFMAEAAAPSQAQMGASADQGYNPYAS 493
+ A +AQ + G P AS
Sbjct: 340 MSVELQKANLEAQNTQTPGSGTTPGAS 366
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 152/366 (41%), Gaps = 90/366 (24%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 174 -------------------------------------------PPKGATIPYHPSLSLGT 190
Query: 367 MEKQPHQGISA---YGREAPVNVHG----SSNAQ--STPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V SS+A +TPS++ TQ +Q+ +P
Sbjct: 191 VLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPS 476
A + S
Sbjct: 311 TAKSTS 316
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 158/365 (43%), Gaps = 63/365 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGH-------NPQYMPPPRQAESYYPP 360
P P P + Q SG Y H N PP++A +
Sbjct: 179 -----RPKPS----SSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQ 229
Query: 361 ADLPPPMEKQPHQGI-------SAYGREAPVNVHGSS------------NAQSTPSMITQ 401
+P P + HQ ++G V SS +AQ+T
Sbjct: 230 YAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVESSSPDEKGYWAGLDASAQTT------ 283
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+ ++ IP +IG GA I+ IR+ SGA + I + V I+G+A+ + A
Sbjct: 284 -SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLA 342
Query: 462 QQLIQ 466
Q LI
Sbjct: 343 QYLIN 347
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 152/366 (41%), Gaps = 90/366 (24%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 174 -------------------------------------------PPKGATIPYHPSLSLGT 190
Query: 367 MEKQPHQGISA---YGREAPVNVHG----SSNAQ--STPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V SS+A +TPS++ TQ +Q+ +P
Sbjct: 191 VLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPS 476
A + S
Sbjct: 311 TAKSTS 316
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 152/366 (41%), Gaps = 90/366 (24%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 174 -------------------------------------------PPKGATIPYHPSLSLGT 190
Query: 367 MEKQPHQGISA---YGREAPVNVHG----SSNAQ--STPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V SS+A +TPS++ TQ +Q+ +P
Sbjct: 191 VLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPS 476
A + S
Sbjct: 311 TAKSTS 316
>gi|452978145|gb|EME77909.1| hypothetical protein MYCFIDRAFT_63821 [Pseudocercospora fijiensis
CIRAD86]
Length = 480
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 155/378 (41%), Gaps = 47/378 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + +I A+ + + G ER + +S
Sbjct: 119 VRAIISSAEAATVIGKGGENVTQIRRLAGAKCTVSEYTRGAVERILTVSGH--------- 169
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+ + S K +LL+P GS+IGKQG ++ IQEA
Sbjct: 170 -VDAVAKAFGLIIRTLNQEPLEQASTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEA 228
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
S R+ +E L +R + V+G A VH A +GS L + L DR
Sbjct: 229 SGA--RLNASES--CLPLSTERSLVVLGVADAVHIATYYVGSTLVEQLTDRFGGPAASNY 284
Query: 302 ---------------SIIPLFEMHM--QMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN 344
++P + QM +P S GPP+ G Y H
Sbjct: 285 AGRHGGPQGVVPGGMQVVPYVPQNTGGQMGHPDNFR---KHSNGPPRTPANPYGQPYMHG 341
Query: 345 PQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI--TQV 402
P+Q Y + P + P Q YG AP H Q M+ +
Sbjct: 342 QPPQQHPQQPMHYGAASPRAPYVGAGPQQP-QPYGHAAPSQAHAGPPQQPVQGMVPGQPI 400
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
TQQ+ IP A+IG GA I+ IR+ SG+ + I E + E V I+GT Q A
Sbjct: 401 TQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQMAL 460
Query: 463 QLIQNFMAEAAAPSQAQM 480
++ + + E++ S + M
Sbjct: 461 YMLYSRLGESSKNSNSIM 478
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 162/378 (42%), Gaps = 62/378 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 307 FEMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
++ P P+ IP P S G + S G+ QY PA++
Sbjct: 170 I---LESP-PKGATIPYHPSLSLGT---VLLSANQGFSVQGQY--------GAVTPAEVT 214
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
+ H A +P V G + T S Q+ +P VIG G+ I
Sbjct: 215 KLQQLSGH----AVPFASPSVVPGLDPSTQTSS------QEFLVPNDLIGCVIGRQGSKI 264
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASA 484
S IR+ SGA + I GE V I+G+ + AQ LI + A + S G++
Sbjct: 265 SEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAP 324
Query: 485 DQGYNPYASMYGSPPSNP 502
P++ + P+ P
Sbjct: 325 ADLPTPFSPPLTALPTAP 342
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 22/163 (13%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA------ 181
G FR+L A ++G +IG+ G +K++ +T ARI++ D P + R +++ A
Sbjct: 49 GHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNR 108
Query: 182 -------KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGT--GGKVSTKLLVPASQ 232
EE E+S A + +LRV +RI++ + G GG VS +LL SQ
Sbjct: 109 RIALQGSSEEVEAS--AAQEAVLRVFERILE-----VAAVVDGVPPGGVVSCRLLAETSQ 161
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVE 275
GS+IGK G V+ I+ S ++VL AE LP A D +VE
Sbjct: 162 VGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVE 204
>gi|402086578|gb|EJT81476.1| Poly(rC)-binding protein 3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 486
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 148/356 (41%), Gaps = 52/356 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + KI + + A+ + D G ER + +S
Sbjct: 128 IRAVISSPEAATVIGKGGENVSKIRQLSGAKCTVSDYQKGAVERILTVSG---------- 177
Query: 192 AMDGLLRVHKRIVDGLD----SDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+D + + I+ L+ SD+S A S T +LL+P GS+IGK G +K I
Sbjct: 178 IVDAVAKAFGLIIRTLNNEPLSDASSAHSKT---YPLRLLIPHILIGSIIGKGGARIKEI 234
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
QEAS L A D L +R + V+G A VH A +GS L + L DR P
Sbjct: 235 QEASGA---RLNASD-SCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAA 290
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY--MPPPRQ-----------A 354
+ + +P P LP G +G+ Y P PR A
Sbjct: 291 SAYATRAGGPVGAVPGGMQVVP--YLPQPAGGNFGNRENYGRRPDPRAGPVPQGAAVPYA 348
Query: 355 ESYYPPADLPPPMEKQPHQGI--SAYGRE--------APVNVHGSSNAQST------PSM 398
+ Y P A P H G AYG A VHG+ + Q P
Sbjct: 349 QHYNPHAAHQPTPAVPVHYGAQGGAYGAHVQPPHVGHAGPQVHGAPHQQPMHSQMPGPGG 408
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
+TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V I+GT
Sbjct: 409 AQSLTQQIYIPNDMVGAIIGKGGTKINEIRQISGSVIKINEPQDNSNERLVTITGT 464
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 152/352 (43%), Gaps = 62/352 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 307 FEMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
++ P P+ IP P S G + S G+ QY PA++
Sbjct: 170 I---LESP-PKGATIPYHPSLSLGT---VLLSANQGFSVQGQY--------GAVTPAEVT 214
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
+ H A +P V G A T S Q+ +P VIG G+ I
Sbjct: 215 KLQQLSGH----AVPFASPSVVPGLDPAAQTSS------QEFLVPNDLIGCVIGRQGSKI 264
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
S IR+ SGA + I GE + I+G+ + AQ LI + A + S
Sbjct: 265 SEIRQMSGAHIKIGNQAEGAGERHITITGSPVSIALAQYLITACLETAKSTS 316
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 147/353 (41%), Gaps = 75/353 (21%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV ++ VG+IIGR+G I++I + +RAR+ + G+ E+A+ I E +S
Sbjct: 129 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYGNPENCTS-- 186
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
KRI++ + ++++ G++ K+L + G +IGK G T+K I +
Sbjct: 187 --------ACKRILEVMQQEANNT---NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 235
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + V D+ F L +R++ V G + + I + LR+ +E
Sbjct: 236 TDTKITVSSINDINSFNL--ERIITVKGSIDNMSRGESQISAKLRQS---------YEND 284
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP--PPME 368
+Q PQ P P + + G G G + P + Y P +P PP
Sbjct: 285 LQALAPQSIMFPGLH----PMAMMSTAGNGMGFTGRTGMYPGTSYPMYQPPTVPGAPP-- 338
Query: 369 KQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
GSS+ Q T + IP + A+IGT G+ I I
Sbjct: 339 -------------------GSSDVQETT--------YLYIPNNAVGAIIGTKGSHIRNII 371
Query: 429 RSSGATVTI----------QETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
R SGA+V I Q+T E V I GT AQ LI M E
Sbjct: 372 RFSGASVKIAPLEADKPLEQQT-----ERKVTIVGTPEAQWKAQYLIFEKMRE 419
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGP-PGTTERAVMISAKEEPESS 188
+ +P VG+IIG KG I+ I+ + A +KI D P TER V I E +
Sbjct: 349 LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWK 408
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ +R + V G D +++ ++LVP++Q G +IGK G V+ +Q
Sbjct: 409 AQYLIFEKMR-EEGFVSGTDDV----------RLTVEILVPSAQVGRIIGKGGQNVRELQ 457
Query: 249 EASNCIVRV 257
+ I+++
Sbjct: 458 RVTGSIIKL 466
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 152/366 (41%), Gaps = 90/366 (24%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 174 -------------------------------------------PPKGATIPYHPSLSLGT 190
Query: 367 MEKQPHQGISA---YGREAPVNVHG----SSNAQ--STPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V SS+A +TPS++ TQ +Q+ +P
Sbjct: 191 VLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPS 476
A + S
Sbjct: 311 TAKSTS 316
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 156/353 (44%), Gaps = 47/353 (13%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
GE ++L PA K+G +IG+ G +K++ +ET A I + D + ER + +S+ E +
Sbjct: 312 GEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEALWN 371
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
++ +L++ + + D G ++T+LLVP+S+ G ++G+ G + +
Sbjct: 372 PRSQTIEAILQLQNKTSEYSDK----------GGMTTRLLVPSSKVGCILGQGGHVINEM 421
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRSIIPL 306
+ + +RV ED P A D+ +V++ G+ A+ I S LR + L D +
Sbjct: 422 RRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDAN---- 477
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
G + P PG+GH P +P + S A
Sbjct: 478 ---------------------GGVEPAPVGPVPGFGH-PGKLPGGLPSSSGALGAGSSGG 515
Query: 367 MEKQPHQGISAYGREAPV--NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
E G+ + PV G N S + + +IP + +VIG G ++
Sbjct: 516 FELSKGGGLEYEPQSYPVPPAATGYHNVNS--------SMESKIPNNSVSSVIGMGGGNV 567
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQ 477
+ + +GA V +Q+ + E VEI G++ + AQ ++Q FMA A A Q
Sbjct: 568 ANMSEMAGARVKLQDPQSGGSECVVEIRGSSEHLTAAQSILQAFMASAGAGGQ 620
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 50/247 (20%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI--------- 179
++V+R+L P++K+G +IG+ G +K + EET+A+I + D PG+ ER ++I
Sbjct: 44 DTVYRILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPK 103
Query: 180 --SAKEEPESS--------LPPAMDGLLRVHKRIV-DGLDSDSSHAPSGTGGKVSTKLLV 228
+ E+PE PA D L++VH+RI+ + L + V+ +LLV
Sbjct: 104 EHDSNEDPEMEEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLV 163
Query: 229 PASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAME 288
P + G L+GK+G ++ ++ + +RVL AE LP A+ D +V++ G + KA+
Sbjct: 164 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALY 223
Query: 289 LIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPS-GGPGY---GHN 344
+ + L + NP+ D PP P S GG G+ G +
Sbjct: 224 EVSTLLHQ------------------NPRKDK--------PPSSFPMSFGGQGFHPPGAS 257
Query: 345 PQYMPPP 351
MPPP
Sbjct: 258 MGNMPPP 264
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 162/378 (42%), Gaps = 62/378 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 307 FEMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
++ P P+ IP P S G + S G+ QY PA++
Sbjct: 170 I---LESP-PKGATIPYHPSLSLGT---VLLSANQGFSVQGQY--------GAVTPAEVT 214
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
+ H A +P V G + T S Q+ +P VIG G+ I
Sbjct: 215 KLQQLSGH----AVPFASPSVVPGMDPSTQTSS------QEFLVPNDLIGCVIGRQGSKI 264
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASA 484
S IR+ SGA + I GE V I+G+ + AQ LI + A + S G++
Sbjct: 265 SEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAP 324
Query: 485 DQGYNPYASMYGSPPSNP 502
P++ + P+ P
Sbjct: 325 ADLPTPFSPPLTALPTAP 342
>gi|367043886|ref|XP_003652323.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
gi|346999585|gb|AEO65987.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
Length = 482
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 147/359 (40%), Gaps = 59/359 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + KI + + A+ + D G ER + +S
Sbjct: 125 IRAVISSPEAATVIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSG---------- 174
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ + PS K +LL+P GS+IGK G +K IQEA
Sbjct: 175 IVDAVAKAFGLIIRTLNNEPLNEPSNQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEA 234
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A +GS L + L +R P +
Sbjct: 235 SGA---RLNASD-SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAY 290
Query: 311 MQMPNPQMDHIPPPQSWGP--PQGLPPSGGPGYGHNPQY-----------MPPPRQAESY 357
+P P PQ P+GG YG+ Y MPP +SY
Sbjct: 291 ATRSGGPAGTVPGGMQVVPYNPQ---PAGG-NYGNRDNYYRGRQDPRAYHMPP----QSY 342
Query: 358 YPPADLPPPM------------------EKQPHQGISAYGREAPVNVHGSSNAQSTPSMI 399
PP P P PH + G P + H + Q P
Sbjct: 343 APPYGHPHPAIPNPAVPMPYGAHAAGGYGAGPHVPVHHAGPAGP-HGHAGPHGQPMPGGA 401
Query: 400 TQ----VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
+TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V I+GT
Sbjct: 402 GMPGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGT 460
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 159/392 (40%), Gaps = 90/392 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPT-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 174 -------------------------------------------PPKGATIPYHPSLSLGT 190
Query: 367 MEKQPHQGISAYGREAPVN---------VHGSSNAQSTPSMITQV-------TQQMQIPL 410
+ +QG S G+ V + G + ++PSM+ + +Q+ +P
Sbjct: 191 VLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A + S G++ P++ + P+ P
Sbjct: 311 TAKSTSGGTPGSTPTDLPAPFSPPLTALPTAP 342
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 161/387 (41%), Gaps = 63/387 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ P +S+
Sbjct: 19 TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---PTNSIF 73
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKS 246
A + + + H G+GG ++ +L+VPASQ GSLIGK G +K
Sbjct: 74 KAFTLICKKFEEWCSQF-----HDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + ++V A D+ +R V + G + + + + I + + + IP
Sbjct: 129 IREVTGASIQV--ASDM--LPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIP- 183
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGY-----------------GHNPQYMP 349
+ P PQ GP + +GG Y G NP
Sbjct: 184 -------------YRPKPQVGGP---VILAGGQAYTIQGNYAVPAHSDMGKLGSNPLAGL 227
Query: 350 PPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
PA+ P + G + + S+ + P+ Q T +M +P
Sbjct: 228 AALGLGGLATPANTG---GLNPAALAALAGSQ----LRTSNTNRQQPAGNNQ-THEMTVP 279
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I +E G + T+ I+G V AQ LI
Sbjct: 280 NELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLIS 339
Query: 467 NFMAEAAAPSQAQMGASADQGYNPYAS 493
+ A +AQ + G P AS
Sbjct: 340 MSVELQKANLEAQNTQTPGSGTTPGAS 366
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 146/342 (42%), Gaps = 58/342 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 97
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 98 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 156 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP-- 209
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPA--DLP 364
+ P P S + +GG Y QY +P P Q + A P
Sbjct: 210 ------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 253
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
P Q + P + H ++ IP +IG G I
Sbjct: 254 FPPLGQTNPAFPGLDASPPASTH-----------------ELTIPNDLIGCIIGRQGTKI 296
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 297 NEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 338
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGW---PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G T +PG P S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 257 LGQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 316
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 317 SERQITIT 324
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 149/366 (40%), Gaps = 90/366 (24%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SFLERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIG+ G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGQAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G DL F +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG--DL--FPNSTERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 174 -------------------------------------------PPKGATIPYHPSLSLGT 190
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQ---------STPSMI------TQV-TQQMQIPL 410
+ +QG S G+ V + Q +TPS++ TQ +Q+ +P
Sbjct: 191 VLLSANQGFSVQGQYGAVTQREVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPS 476
A + S
Sbjct: 311 TAKSTS 316
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 162/378 (42%), Gaps = 62/378 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 307 FEMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
++ P P+ IP P S G + S G+ QY PA++
Sbjct: 170 I---LESP-PKGATIPYHPSLSLGT---VLLSANQGFSVQGQY--------GAVTPAEVT 214
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
+ H A +P V G + T S Q+ +P VIG G+ I
Sbjct: 215 KLQQLSGH----AVPFASPSVVPGLDPSTQTSS------QEFLVPNDLIGCVIGRQGSKI 264
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASA 484
S IR+ SGA + I GE V I+G+ + AQ LI + A + S G++
Sbjct: 265 SEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAP 324
Query: 485 DQGYNPYASMYGSPPSNP 502
P++ + P+ P
Sbjct: 325 ADLPTPFSPPLTALPTAP 342
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 149/338 (44%), Gaps = 50/338 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+ P ++
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDAI-- 68
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + + + S S++P+ + V+ +L+VPASQ GSLIGK G +K I+E++
Sbjct: 69 -FKAFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
V+V G + LP +R V + G + + ++ I + +
Sbjct: 128 GAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------CVVML 167
Query: 312 QMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
+ P P+ IP + P P +GG Y QY P + A M+
Sbjct: 168 ESP-PKGATIP----YRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLA-----MQ 217
Query: 369 KQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
+ P + P + S A T ++ IP +IG G I+ IR
Sbjct: 218 QTPFPPLGQTNPAFPAGLDASPPAS---------THELTIPNDLIGCIIGRQGTKINEIR 268
Query: 429 RSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+ SGA + I E + I+GT + + AQ LI
Sbjct: 269 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 306
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 116 VGSTEKKWPGW----PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG 171
+G T +P P S + +P +G IIGR+G I +I + + A+IKI + G
Sbjct: 224 LGQTNPAFPAGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG 283
Query: 172 TTERAVMIS 180
++ER + I+
Sbjct: 284 SSERQITIT 292
>gi|19075184|ref|NP_587684.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|74626925|sp|O74919.1|RNC1_SCHPO RecName: Full=RNA-binding protein rnc1; AltName: Full=RNA-binding
protein that suppresses calcineurin deletion 1
gi|3702642|emb|CAA21234.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces pombe]
Length = 398
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 145/350 (41%), Gaps = 74/350 (21%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R L+ ++ G IIG+ G+ + ++ T + + P +R + IS
Sbjct: 95 TLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISG--------- 145
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST----KLLVPASQAGSLIGKQGGTVKS 246
++ ++R ++ I+D +S++ P GT +T +LL+ S GS+IG+ G +K
Sbjct: 146 -PLENVVRAYRFIIDIFAKNSTN-PDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKL 203
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD---RSI 303
IQ+ +C R++ ++D+ +R VE+ G +H A+ IG K L+D R
Sbjct: 204 IQDKCSC--RMIASKDM--LPQSTERTVEIHGTVDNLHAAIWEIG----KCLIDDWERGA 255
Query: 304 IPLFE---MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY--- 357
+F + P P + PQ PP + G P SY
Sbjct: 256 GTVFYNPVSRLTQPLPSLASTASPQQVSPPAAPSTTSGEAI---------PENFVSYGAQ 306
Query: 358 -YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416
+P + P +QP +VTQ + IP +
Sbjct: 307 VFPATQM--PFLQQP-----------------------------KVTQNISIPADMVGCI 335
Query: 417 IGTAGASISYIRRSSGATVTI-QETRGVPGEMTVEISGTASQVQTAQQLI 465
IG G+ IS IRR+SG+ ++I +E GE I+GT + + A L+
Sbjct: 336 IGRGGSKISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKALFLL 385
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 156/353 (44%), Gaps = 47/353 (13%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
GE ++L PA K+G +IG+ G +K++ +ET A I + D + ER + +S+ E +
Sbjct: 340 GEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEALWN 399
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
++ +L++ + + D G ++T+LLVP+S+ G ++G+ G + +
Sbjct: 400 PRSQTIEAILQLQNKTSEYSDK----------GGMTTRLLVPSSKVGCILGQGGHVINEM 449
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-KFLVDRSIIPL 306
+ + +RV ED P A D+ +V++ G+ A+ I S LR + L D +
Sbjct: 450 RRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDAN---- 505
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
G + P PG+GH P +P + S A
Sbjct: 506 ---------------------GGVEPAPVGPVPGFGH-PGKLPGGLPSSSGALGAGSSGG 543
Query: 367 MEKQPHQGISAYGREAPV--NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
E G+ + PV G N S + + +IP + +VIG G ++
Sbjct: 544 FELSKGGGLEYEPQSYPVPPAATGYHNVNS--------SMESKIPNNSVSSVIGMGGGNV 595
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQ 477
+ + +GA V +Q+ + E VEI G++ + AQ ++Q FMA A A Q
Sbjct: 596 ANMSEMAGARVKLQDPQSGGSECVVEIRGSSEHLTAAQSILQAFMASAGAGGQ 648
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 50/247 (20%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI--------- 179
++V+R+L P++K+G +IG+ G +K + EET+A+I + D PG+ ER ++I
Sbjct: 72 DTVYRILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPK 131
Query: 180 --SAKEEPESS--------LPPAMDGLLRVHKRIV-DGLDSDSSHAPSGTGGKVSTKLLV 228
++ E+PE PA D L++VH+RI+ + L + V+ +LLV
Sbjct: 132 EHNSNEDPEREEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLV 191
Query: 229 PASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAME 288
P + G L+GK+G ++ ++ + +RVL AE LP A+ D +V++ G + KA+
Sbjct: 192 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALY 251
Query: 289 LIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPS-GGPGY---GHN 344
+ + L + NP+ D PP P S GG G+ G +
Sbjct: 252 EVSTLLHQ------------------NPRKDK--------PPSSFPMSFGGQGFHPPGAS 285
Query: 345 PQYMPPP 351
MPPP
Sbjct: 286 MGNMPPP 292
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 162/378 (42%), Gaps = 62/378 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 307 FEMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
++ P P+ IP P S G + S G+ QY PA++
Sbjct: 170 I---LESP-PKGATIPYHPSLSLGT---VLLSANQGFSVQGQY--------GAVTPAEVT 214
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
+ H A +P V G + T S Q+ +P VIG G+ I
Sbjct: 215 KLQQLSGH----AVPFASPSVVPGLDPSTQTSS------QEFLVPNDLIGCVIGRQGSKI 264
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASA 484
S IR+ SGA + I GE V I+G+ + AQ LI + A + S G++
Sbjct: 265 SEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETANSTSGGTPGSAP 324
Query: 485 DQGYNPYASMYGSPPSNP 502
P++ + P+ P
Sbjct: 325 ADLPTPFSPPLTALPTAP 342
>gi|341894976|gb|EGT50911.1| hypothetical protein CAEBREN_13773 [Caenorhabditis brenneri]
Length = 397
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 150/368 (40%), Gaps = 64/368 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G+ R+LV ++ G+IIG+ GE IK++ E A +++ D T ER ++A E+
Sbjct: 48 GKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADEKT-- 103
Query: 188 SLPPAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+L + K ++ L D+ S P ++L+ S AG+LIG+ G +K
Sbjct: 104 --------VLNILKDVLPRLEDNFSERDP------CEVRMLIHQSHAGALIGRNGSKIKE 149
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
++E + +++ DRV+ G+ V +E + L++ + S P
Sbjct: 150 LREKCSARLKIFTG----CAPGSTDRVLITSGEQKNVLAIIEEVMRELKEIPIKGSATPY 205
Query: 307 F-EMHMQMPN--------PQMDHIPPPQSWGPPQ----------------GLPPSGGPG- 340
H N M PP S GP Q + P GGP
Sbjct: 206 LPSFHYDPSNISEYGGFPGTMSSGGPPNSRGPSQQRGGQGPPGGPRSYGGAVTPGGGPRS 265
Query: 341 --YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSM 398
G Q+ P Q + P PP + Q +G P N +
Sbjct: 266 FEAGDFQQFRGGPVQGYAMNAPGY--PPQQGQ-------FGGAPPANTGYGYGPGGGGPV 316
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
T Q+ IP +IG G I+ IR+ SGA +T++ + G P E + I GT Q+
Sbjct: 317 ---TTAQVTIPSDLGGTIIGRGGERIARIRQDSGAQITLEPSNGQP-ERIITIKGTEQQI 372
Query: 459 QTAQQLIQ 466
+AQ L+Q
Sbjct: 373 HSAQYLLQ 380
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 24/117 (20%)
Query: 72 QVPEDHVPED--QVPEDHVPEDQVPEDIVPE-DSQLQEKQENEVNLAVGSTEKKWPGWPG 128
QVP+ + PE V D + +D++P + E+ EV
Sbjct: 84 QVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNFSERDPCEV---------------- 127
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEE 184
RML+ G++IGR G IK++ E+ AR+KI G PG+T+R ++ S +++
Sbjct: 128 ----RMLIHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQK 180
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 157/357 (43%), Gaps = 44/357 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 210
Query: 307 FEMHMQMP----NPQMDHIPPPQSWGPPQGL---PPSGGPGYGHNPQY-MPPPRQAESY- 357
P Q+ P S L PP P Y QY +P P + +
Sbjct: 211 RPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPL--PAYTIQGQYAIPHPDLTKLHQ 268
Query: 358 -------YPPADLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIP 409
+PP P P + + + E N+ G SS ++P T ++ IP
Sbjct: 269 LAMQQTPFPPLGQTNP--AFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIP 323
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 324 NDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 380
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 313 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 366
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 161/358 (44%), Gaps = 69/358 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I+D L+ D S + + + V+ +++VPASQ GSLIGK G +K I
Sbjct: 64 PTTAIFKAFSMIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G A H +E + ++ V
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGTA---HSIIECV----KQICV-------- 164
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPP--ADL 363
+ ++ P P+ IP P+ G P + +GG Y Q+ +P P + + P + L
Sbjct: 165 -VMLESP-PKGVTIPYRPKPSGSP--VIFAGGQAYAVQGQHAIPQPDSSSAAISPQLSKL 220
Query: 364 --------PPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
P PM +QG + A H +M IP
Sbjct: 221 HQLAMQQGPFPMAT-CNQGFTGMDASAQACSH-----------------EMTIPNDLIGC 262
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
+IG GA IS IR+ SGA + I + V I+G+ + + A+ LI+ ++ A
Sbjct: 263 IIGRQGAKISEIRQMSGAQIKIANPVDGSTDRQVTITGSPASIGLAEYLIKARLSSEA 320
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 153/363 (42%), Gaps = 77/363 (21%)
Query: 123 WPGWPGESV-----FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+ G PG+S R+LV + VG+IIGR+G I++I ++TRAR+ + G+ E+A
Sbjct: 276 FGGLPGQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKA 335
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ KRI++ + ++++ G++ K+L + G +
Sbjct: 336 ITIYG--NPENCTNAC--------KRILEVMQQEANNTNK---GEICLKILAHNNLIGRI 382
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + +A I + LR+
Sbjct: 383 IGKGGNTIKRIMQETDTKITVSSINDINSFNL--ERIITVKGAIDNMSRAEAQISAKLRQ 440
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + G GYG Y
Sbjct: 441 ---------SYENDLQAMAPQTMMFPGLH----PMAMMATAGIGYGSRGLYTG------- 480
Query: 357 YYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416
+ P+ G+ G G ++Q T + IP + A+
Sbjct: 481 ------------QAPYPGMYPAG-----AAQGGGDSQETTYLY--------IPNNAVGAI 515
Query: 417 IGTAGASISYIRRSSGATVTI--------QETRGVPGEMTVEISGTASQVQTAQQLIQNF 468
IGT G+ I I R SGA+V I QET+ E V I G+ AQ LI
Sbjct: 516 IGTKGSHIRNIIRFSGASVKIAPIDETKPQETQ---NERRVTIVGSPEAQWKAQYLIFEK 572
Query: 469 MAE 471
M E
Sbjct: 573 MRE 575
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESSLP 190
+ +P VG+IIG KG I+ I+ + A +KI + P T+ ++ PE+
Sbjct: 505 LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWK 564
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
L K +G + S +++ +++VP+SQ G +IGK G V+ +Q
Sbjct: 565 AQ---YLIFEKMREEGFVAGSDDV------RLTVEIMVPSSQVGRIIGKGGQNVRELQRV 615
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
+ ++++ P +D+ V ++G V A I + +V +S++PL
Sbjct: 616 TGSVIKLPEQGASP---QEDETTVHIIGPFFSVQSAQRRI-----RAMVLQSVVPL 663
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 151/352 (42%), Gaps = 62/352 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 307 FEMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
++ P P+ IP P S G + S G+ QY PA++
Sbjct: 170 I---LESP-PKGATIPYHPSLSLGT---VLLSANQGFSVQGQY--------GAVTPAEVT 214
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
+ H A +P V G T S Q+ +P VIG G+ I
Sbjct: 215 KLQQLSGH----AVPFASPSVVPGLDPGTQTSS------QEFLVPNDLIGCVIGRQGSKI 264
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
S IR+ SGA + I GE V I+G+ + AQ LI + A + S
Sbjct: 265 SEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTS 316
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 157/357 (43%), Gaps = 44/357 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 210
Query: 307 FEMHMQMP----NPQMDHIPPPQSWGPPQGL---PPSGGPGYGHNPQY-MPPPRQAESY- 357
P Q+ P S L PP P Y QY +P P + +
Sbjct: 211 RPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPL--PAYTIQGQYAIPHPDLTKLHQ 268
Query: 358 -------YPPADLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIP 409
+PP P P + + + E N+ G SS ++P T ++ IP
Sbjct: 269 LAMQQTPFPPLGQTNP--AFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIP 323
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 324 NDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 380
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 313 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 366
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 154/362 (42%), Gaps = 60/362 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G + ER V I+ E
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGPTE------- 69
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
G+ R I + D + A + + V+ +L+ P SQ GSLIGK G +K I
Sbjct: 70 ---GIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEI 126
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E + V+V G + LP +R V + SG +A+ H+ +++
Sbjct: 127 RETTGAQVQVAG-DMLPD---STERAVTI----SGTPQAITQCVRHICSVMLES------ 172
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
PP+ P P P H + P A+++ P
Sbjct: 173 ---------------PPKGATIP--YRPKVIPAGTH--AVLAPQHSAQAFAIPGQY---- 209
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSM------ITQVTQQMQIPLSYADAVIGTAG 421
HQ ++ + A ++ S QS P+ +Q++ IP + +IG G
Sbjct: 210 -AFAHQDLTKLHQLAMQHIPLPSLGQSNPTFPGLDASAPTSSQELAIPNDFIGCIIGRQG 268
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMG 481
+ I+ IR+ SGA + I V I+G+ + + AQ LI + A QA
Sbjct: 269 SKINEIRQVSGAHIKIASATDGSAMRQVTITGSPASISVAQYLINASLEMAKYTMQAASS 328
Query: 482 AS 483
A+
Sbjct: 329 AT 330
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 160/362 (44%), Gaps = 67/362 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 91 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 140
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 141 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 198
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 199 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------C 238
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQYM---PPPRQAESYYPPA 361
+ ++ P P+ IP + P P +GG Y QY P P Y P A
Sbjct: 239 VVMLESP-PKGATIP----YRPKPASTPVIFAGGQAYTIQGQYAIPHPDPLAHGLYQPSA 293
Query: 362 DL------PPPMEKQPH----QGISAY-GREAPVNVHGSSNAQS----TPSMITQ---VT 403
L M++ P Q A+ G + P +H S AQ+ +P + T
Sbjct: 294 ILQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP--LHSSEEAQNLMGQSPGLDASPPAST 351
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
++ IP +IG G I+ IR+ SGA + I E + I+GT + + AQ
Sbjct: 352 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQY 411
Query: 464 LI 465
LI
Sbjct: 412 LI 413
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP + L +H ++ G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 54 SVLPHSTLSTLSLHPQLYFGKKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 113
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 114 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 160
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 347 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 400
>gi|407917412|gb|EKG10721.1| K-like protein [Macrophomina phaseolina MS6]
Length = 488
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 155/370 (41%), Gaps = 54/370 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + +I + A+ + D G ER + +S
Sbjct: 134 VRAIISSAEAATVIGKGGENVTQIRRMSGAKCTVSDYSRGAVERILTVSG---------- 183
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ ++PS K +LL+P GS+IGK G ++ IQEA
Sbjct: 184 LVDAVAKAFGLIIRTLNNEDLNSPSTPQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEA 243
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A +GS L + L +R P +
Sbjct: 244 SGA---RLNASD-SCLPLSTERSLVVLGVADAVHIATYYVGSTLVEQLTERFGGPAASAY 299
Query: 311 --------------MQMPNPQMDHIPPPQS--WGPP----------QGLPPSG--GPGYG 342
MQ+ + ++P P WGPP Q P +G P +G
Sbjct: 300 ATRSGGPAGVVPGGMQV----VPYVPQPAGGQWGPPDTFHRKGPQAQRTPAAGYGAPMHG 355
Query: 343 HNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVN-VHGSSNAQSTPSMI-- 399
PQ P + P QP Q YG H AQ M+
Sbjct: 356 QYPQQPQAPLHYGAGSPRHAYTGAGPHQPQQ----YGAPHVAQPSHAGQPAQPMQGMMPG 411
Query: 400 TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
+TQQ+ IP A+IG GA I+ IR+ SG+ + I E + E V I+GT Q
Sbjct: 412 QPMTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTQECNQ 471
Query: 460 TAQQLIQNFM 469
A ++ + +
Sbjct: 472 MALYMLYSRL 481
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 157/357 (43%), Gaps = 44/357 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 210
Query: 307 FEMHMQMP----NPQMDHIPPPQSWGPPQGL---PPSGGPGYGHNPQY-MPPPRQAESY- 357
P Q+ P S L PP P Y QY +P P + +
Sbjct: 211 RPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPL--PAYTIQGQYAIPHPDLTKLHQ 268
Query: 358 -------YPPADLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIP 409
+PP P P + + + E N+ G SS ++P T ++ IP
Sbjct: 269 LAMQQTPFPPLGQTNP--AFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIP 323
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 324 NDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 380
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 313 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 366
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP + L H + G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 11 SVLPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 70
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 71 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 155/338 (45%), Gaps = 52/338 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+ P ++
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDTI-- 70
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + + + + S++P+ + V+ +L+VPASQ GSLIGK G +K ++E++
Sbjct: 71 -FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
V+V G + LP +R V + G E I +R+ V + +
Sbjct: 130 GAQVQVAG-DMLPN---STERAVTISGTP-------EAIIQCVRQICV---------VML 169
Query: 312 QMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPADLPPPMEK 369
+ P P+ IP P+ P SGG Y QY +P P Q + A M++
Sbjct: 170 ESP-PKGATIPYRPKPTSTPVIF--SGGQAYTIQGQYAIPHPDQLTKLHQLA-----MQQ 221
Query: 370 QPHQGISAYGREAPV--NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYI 427
P + G+ P + S A T ++ IP +IG G I+ I
Sbjct: 222 TPF---TPLGQTTPAFPGLDASPPAS---------THELTIPNDLIGCIIGRQGTKINEI 269
Query: 428 RRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
R+ SGA + I E + I+GT + + AQ LI
Sbjct: 270 RQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLI 307
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGW---PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G T +PG P S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 227 LGQTTPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGS 286
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 287 SERQITIT 294
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 161/383 (42%), Gaps = 72/383 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 307 FEMHMQMPNPQMDHIP--PPQSWG-----PPQGLPPSGGPGYGHNPQYMPPPRQAESYYP 359
++ P P+ IP P S G QG P G QY
Sbjct: 170 I---LESP-PKGATIPYHPSLSLGTVLLSANQGFPVQG--------QY--------GAVT 209
Query: 360 PADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGT 419
PA++ + H A +P V G T S Q+ +P VIG
Sbjct: 210 PAEVTKLQQLSGH----AVPFASPSVVPGLDPGTQTSS------QEFLVPNDLIGCVIGR 259
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQ 479
G+ IS IR+ SGA + I GE V I+G+ + AQ LI + A + S
Sbjct: 260 QGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGT 319
Query: 480 MGASADQGYNPYASMYGSPPSNP 502
G++ P++ + P+ P
Sbjct: 320 PGSTPADLSAPFSPPLTALPTAP 342
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 146/342 (42%), Gaps = 58/342 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 97
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 98 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 156 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP-- 209
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPA--DLP 364
+ P P S + +GG Y QY +P P Q + A P
Sbjct: 210 ------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 253
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
P Q + P + H ++ IP +IG G I
Sbjct: 254 FPPLGQTNPAFPGLDASPPASTH-----------------ELTIPNDLIGCIIGRQGTKI 296
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 297 NEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 338
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGW---PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G T +PG P S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 257 LGQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 316
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 317 SERQITIT 324
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP + L H + G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 11 SVLPHSTLSALSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 70
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 71 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 151/357 (42%), Gaps = 60/357 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G + ER V I+ E
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGPTE------- 69
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
G+ R I + D + A + + V+ +L+ P SQ GSLIGK G +K I
Sbjct: 70 ---GIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEI 126
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E + V+V G + LP +R V + SG +A+ H+ +++
Sbjct: 127 RETTGAQVQVAG-DMLPD---STERAVTI----SGTPQAITQCVRHICSVMLES------ 172
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
PP+ P P P H + P A ++ P
Sbjct: 173 ---------------PPKGATIP--YRPKILPAGAH--AVLAPQHSAHAFAIPGQY---- 209
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSM------ITQVTQQMQIPLSYADAVIGTAG 421
HQ ++ + A ++ S QS P+ + TQ++ IP +IG G
Sbjct: 210 -AFAHQDLTKLHQLAMQHIPLPSLGQSNPTFPGLDSSASTSTQELAIPNDLIGCIIGRQG 268
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQA 478
+ I+ IR+ SGA + I V I+G+ + + AQ LI + A QA
Sbjct: 269 SKINEIRQVSGAHIKIASATDGSAVRQVTITGSPASISIAQYLINASLEMARYTMQA 325
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 12/184 (6%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R++ P +G++IG+ G I +I +E+ A IK+ + + ISAKE +
Sbjct: 30 EFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIYDH- 88
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
P ++ +R+ R + ++ DS +T+LLVP+S+ G L+GK G + ++
Sbjct: 89 YSPTIEAAVRLQPRCSEKMERDSGLIS------FTTRLLVPSSRIGCLLGKGGAIIDEMR 142
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR-----SI 303
+ + I+R+ E+LP A DD +V++ GD A+ I LR + DR +I
Sbjct: 143 KLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVFDREGAMSAI 202
Query: 304 IPLF 307
+P+
Sbjct: 203 LPVL 206
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 156/367 (42%), Gaps = 87/367 (23%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSIIECV 159
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLP------PSGGPGY--GHNPQYMPPPRQAESYYP 359
+ HI PP+G+ PS P G +Y +A +
Sbjct: 160 K-----------HICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDKAYTIQG 208
Query: 360 PADLPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNAQSTPSMI 399
+P P + HQ G S +P V G ++AQ+T
Sbjct: 209 QYAIPQPDLTKLHQLAVQQSHFPMTHGNTGFSGIESSSP-EVKGYWAGLDASAQTT---- 263
Query: 400 TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
+ ++ IP +IG GA I+ I + SGA + I T + V I+G+A+ +
Sbjct: 264 ---SHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTITGSAASIS 320
Query: 460 TAQQLIQ 466
AQ LI
Sbjct: 321 LAQYLIN 327
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 159/359 (44%), Gaps = 50/359 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 308 EMHMQMP----NPQMDHIPPPQSWGPPQGL---PPSGGPGYGHNPQY-MPPPRQAESY-- 357
P Q+ P S L PP P Y QY +P P + +
Sbjct: 180 PKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPL--PAYTIQGQYAIPHPDLTKLHQL 237
Query: 358 ------YPP---ADLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQ 407
+PP A+ P EK P + E N+ G SS ++P T ++
Sbjct: 238 AMQQTPFPPLGQANPAFPGEKLP-----LHSSEEAQNLMGQSSGLDASPP---ASTHELT 289
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP +IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 290 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 348
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 281 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 334
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 153/337 (45%), Gaps = 50/337 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+ P ++
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDTI-- 70
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + + + + S++P+ + V+ +L+VPASQ GSLIGK G +K ++E++
Sbjct: 71 -FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 130 GAQVQVAG-DMLPN---STERAVTISGTPEAIIQCVKQICVVMLESPPKGATIP------ 179
Query: 312 QMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPADLPPPMEKQ 370
+ P P S + SGG Y QY +P P Q + A M++
Sbjct: 180 --------YRPKPAST----PVIFSGGQAYTIQGQYAIPHPDQLTKLHQLA-----MQQT 222
Query: 371 PHQGISAYGREAPV--NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
P + G+ P + S A T ++ IP +IG G I+ IR
Sbjct: 223 PF---TPLGQATPAFPGLDASPPAS---------THELTIPNDLIGCIIGRQGTKINEIR 270
Query: 429 RSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
+ SGA + I E + I+GT + + AQ LI
Sbjct: 271 QMSGAQIKIANAMEGSSERQITITGTPANISLAQYLI 307
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGW---PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G +PG P S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 227 LGQATPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGS 286
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 287 SERQITIT 294
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 147/345 (42%), Gaps = 64/345 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQY-MPPPRQAESYYPPA-- 361
+ ++ P P+ IP + P P +GG Y QY +P P Q + A
Sbjct: 164 VVMLESP-PKGATIP----YRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQ 218
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAG 421
P P Q + P + H ++ IP +IG G
Sbjct: 219 QTPFPPLGQTNPAFPGLDASPPASTH-----------------ELTIPNDLIGCIIGRQG 261
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 262 TKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 306
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGW---PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G T +PG P S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 225 LGQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 284
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 285 SERQITIT 292
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 160/367 (43%), Gaps = 69/367 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 225
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS------------NAQSTPSMI 399
P DL + +Q +G + SS +AQ+T
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDASAQTT---- 281
Query: 400 TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
+ ++ IP +IG GA I+ IR+ SGA + I + V I+G+A+ +
Sbjct: 282 ---SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASIS 338
Query: 460 TAQQLIQ 466
AQ LI
Sbjct: 339 LAQYLIN 345
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 146/345 (42%), Gaps = 52/345 (15%)
Query: 122 KWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA 181
K G V +M++ + +GSIIG++G IK+ +E+ A I I DG T ER V ++
Sbjct: 19 KGRGHSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGS--TPERIVSVTG 76
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
++ + + +++ D L S+S S T V+ +L+VP SQ GS+IGK G
Sbjct: 77 TKDA------VVTAFALIGQKLEDELKSNSK---SNTTPPVTLRLIVPGSQCGSIIGKGG 127
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+K I+E S V V G E LP +R V + G + ++L+ + +F
Sbjct: 128 AKIKEIREVSGASVVVAG-EFLPG---SSERAVTLSGTPEALETCIDLLCGVMIEFPPRG 183
Query: 302 SIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPA 361
+P +Q Q PPQ +G P GP YG P P
Sbjct: 184 HPMPYTPHKLQQ---QFGFYGPPQGFGYP-------GP-YGM-PHAFP------------ 219
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAG 421
G A G P IT T M I ++IG G
Sbjct: 220 -----------NGFMAGRGPYGGGRKGKGPPPPQPGPITSHT--MTILKGAVGSIIGQKG 266
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+ I+ IR+ SGA++ I ++ + V I+GTA V AQ LI
Sbjct: 267 SYITGIRQMSGASIKIGDSENGDDKREVLITGTAEAVGLAQFLIN 311
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQ 459
VT ++ +P S ++IG GA I IR SGA+V + +PG E V +SGT ++
Sbjct: 108 VTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVVA-GEFLPGSSERAVTLSGTPEALE 166
Query: 460 TAQQLIQNFMAE 471
T L+ M E
Sbjct: 167 TCIDLLCGVMIE 178
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 154/347 (44%), Gaps = 69/347 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPS-------GGPGYGHNPQYMPPPRQAESYYPP 360
E Q+ ++ PP+ P PS GG Y QY
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQY------------- 201
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGT 419
+P P + HQ ++ P++ HG++ + Q T ++ IP +IG
Sbjct: 202 -AIPQPDLTKLHQ-LAMQQSHFPMS-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGR 258
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 259 QGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 305
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 148/356 (41%), Gaps = 57/356 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + + + + A+ + D G ER + +S
Sbjct: 128 VRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVSG---------- 177
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ APS + K +LL+P GS+IGK G +K IQEA
Sbjct: 178 VVDAVAKAFGLIIRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEA 237
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A +GS L + L +R P +
Sbjct: 238 SGA---RLNASD-SYLPLSTERSLVVLGVADAVHIATYYVGSTLFEQLTERFGGPAASAY 293
Query: 311 MQ------------MPNPQMDHIPPPQSWGP-----PQGLPPSGGPGYGHNPQYMPPPRQ 353
MPN + S P P GG G G PQ P+Q
Sbjct: 294 ASRSGGPAGVVPGAMPNHTVKDRHLTNSQLPLHITGGHASPAVGGYG-GVGPQQ---PQQ 349
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
A P QPH G+ P + G +TQQ+ IP
Sbjct: 350 AGHAVP----------QPHGATGPQGQPMPGAIPGQP-----------LTQQIFIPNDMV 388
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
A+IG GA I+ IR+ SG+ + I E + E V I+GTA Q A ++ + +
Sbjct: 389 GAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECNQMALYMLYSRL 444
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 151/352 (42%), Gaps = 62/352 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCSAPA-NGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 307 FEMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
++ P P+ IP P S G + S G+ QY PA++
Sbjct: 170 I---LESP-PKGATIPYHPSLSLGT---VLLSANQGFSVQSQY--------GGVTPAEVT 214
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
+ H A +P V G T S Q+ +P VIG G+ I
Sbjct: 215 KLQQLSGH----AVPFGSPSMVPGLDPGAQTSS------QEFLVPNDLIGCVIGRQGSKI 264
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
S IR+ SGA + I GE V I+G+ + AQ LI + A + S
Sbjct: 265 SEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTS 316
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 147/345 (42%), Gaps = 64/345 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQY-MPPPRQAESYYPPA-- 361
+ ++ P P+ IP + P P +GG Y QY +P P Q + A
Sbjct: 164 VVMLESP-PKGATIP----YRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQ 218
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAG 421
P P Q + P + H ++ IP +IG G
Sbjct: 219 QTPFPPLGQTNPAFPGLDASPPASTH-----------------ELTIPNDLIGCIIGRQG 261
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 262 TKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 306
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGW---PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G T +PG P S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 225 LGQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 284
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 285 SERQITIT 292
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 157/356 (44%), Gaps = 44/356 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 308 EMHMQMP----NPQMDHIPPPQSWGPPQGL---PPSGGPGYGHNPQY-MPPPRQAESY-- 357
P Q+ P S L PP P Y QY +P P + +
Sbjct: 180 PKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPL--PAYTIQGQYAIPHPDLTKLHQL 237
Query: 358 ------YPPADLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPL 410
+PP P P + + + E N+ G SS ++P T ++ IP
Sbjct: 238 AMQQTPFPPLGQTNP--AFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPN 292
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 293 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 348
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 281 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 334
>gi|452004384|gb|EMD96840.1| hypothetical protein COCHEDRAFT_1220374 [Cochliobolus
heterostrophus C5]
Length = 489
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 160/369 (43%), Gaps = 48/369 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R + + +IIG+ GE + +I + A+ + D G ER + +S +
Sbjct: 131 IRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQ--------- 181
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV L+ + PS + K +LL+P GS+IGK G ++ IQEA
Sbjct: 182 -VDAVSKAFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEA 240
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
SN L A D + +R + V+G A VH A+ + L + L +R
Sbjct: 241 SNA---KLNASDT-LLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQY 296
Query: 302 --------SIIPLFEMHMQ--MPNPQMDHIPPPQSWG---PPQGLPPSGGPGYGHNPQYM 348
+++P M +Q +P P PQ++ P Q P GG GYG +
Sbjct: 297 ATRSGMAANVVP-GGMSVQPYVPQPAGGQYSHPQNFRRQEPAQRTPAHGG-GYGAPHMHG 354
Query: 349 PPPRQAESYYP--PADLPPPMEKQPHQGISA---YGREAPVNVHGSSNAQSTP--SMITQ 401
PP+Q+ +P P P + P+ G +A YG A P S+ Q
Sbjct: 355 QPPQQSPYGHPNMPYGAASP-SRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGSIPGQ 413
Query: 402 -VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQT 460
+TQQ+ IP A+IG GA I+ IR+ SG+ + I E E V I+GT Q
Sbjct: 414 PLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQECNQM 473
Query: 461 AQQLIQNFM 469
A ++ + +
Sbjct: 474 ALYMLYSRL 482
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 156/346 (45%), Gaps = 50/346 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLD----SDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ S +++ + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPA---- 361
E Q P P+ IP P S P + +GG Y QY P + A
Sbjct: 168 ETLSQSP-PKGVTIPYRPKPSSSP---VIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 223
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIGTA 420
P GI + E G ++AQ+T + ++ IP +IG
Sbjct: 224 HFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTT-------SHELTIPNDLIGCIIGRQ 276
Query: 421 GASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 277 GAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 322
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 153/347 (44%), Gaps = 69/347 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPS-------GGPGYGHNPQYMPPPRQAESYYPP 360
E Q+ ++ PP+ P PS GG Y QY
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQY------------- 201
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGT 419
+P P + HQ ++ P+ HG++ + Q T ++ IP +IG
Sbjct: 202 -AIPQPDLTKLHQ-LAMQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGR 258
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 259 QGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 305
>gi|320591828|gb|EFX04267.1| kh domain containing RNA-binding protein [Grosmannia clavigera
kw1407]
Length = 476
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 144/363 (39%), Gaps = 67/363 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + KI + + A+ + D G ER + +S
Sbjct: 119 IRAVISSPEAATIIGKGGENVSKIRQMSNAKCTVSDYQKGAVERILTVSG---------- 168
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ PS K +LL+P GS+IGK G +K IQEA
Sbjct: 169 VVDAVAKAFGLIIRTLNNEPLGEPSNAHSKTYPLRLLIPHILIGSIIGKGGSRIKEIQEA 228
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
S L A D + +R + V+G A VH A +GS L + L +R
Sbjct: 229 SGA---RLNASD-SCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAY 284
Query: 302 ---------------SIIPLFEM-------------HMQMPNPQMDHIPPPQSWGPPQGL 333
++P Q P Q+ PPQ +G P G
Sbjct: 285 AARGGGPVGVVPGGMQVVPYLPQPAGGSYGRTENYSRRQDPRAQL----PPQGYGAPYGA 340
Query: 334 PPSGGPGYGHNPQYMPPPRQAESYYPPADLPP-PMEKQPHQGISAYGREAPVNVHGSSNA 392
P + GPG P P P P + H G +G A H
Sbjct: 341 PIAHGPG----PAV---PMYGAQAAGAYGAPQLPHQNAAHHGAMPHGPHAGQPPHAGPGG 393
Query: 393 QSTPSMITQ-VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEI 451
P+M +TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V I
Sbjct: 394 H--PAMAGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTI 451
Query: 452 SGT 454
+GT
Sbjct: 452 TGT 454
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 162/392 (41%), Gaps = 90/392 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
G PP G +P Y+P L
Sbjct: 170 I-----------------------LGSPPKGA--------TIP-------YHPSLSLGTV 191
Query: 367 MEKQPHQGISA---YGREAPVNV------HGSSNAQSTPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V G + ++PS++ TQ +Q+ +P
Sbjct: 192 LLSA-NQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A + S G++ P++ + P+ P
Sbjct: 311 TAKSTSGGTPGSAPADLPTPFSPPLTALPTAP 342
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 155/354 (43%), Gaps = 40/354 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 308 EMHMQMP----NPQMDHIPPPQSWGPPQGL---PPSGGPGYGHNPQYMPPPRQAESYYPP 360
P Q+ P S L PP P Y QY P +
Sbjct: 180 PKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPL--PAYTIQGQYAIPHPDLTKLHQL 237
Query: 361 AD----LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSY 412
A LPP + P + + + E N+ G SS ++P T ++ IP
Sbjct: 238 AMQQTPLPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDL 294
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 295 IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 348
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 281 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 334
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 156/364 (42%), Gaps = 59/364 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHI-----PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 179 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 233
Query: 363 LPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNAQSTPSMITQV 402
+P P + HQ G S +P V G ++AQ+T
Sbjct: 234 IPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWAGLDASAQTT------- 285
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
+ ++ IP +IG GA I+ IR+ SGA + + V I+G+A+ + AQ
Sbjct: 286 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQ 345
Query: 463 QLIQ 466
LI
Sbjct: 346 YLIN 349
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 153/340 (45%), Gaps = 55/340 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
E Q+ ++ PP+ P PS P + QA + +P P
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSP-------VIFAGGQAYTIQGQYAIPQPD 207
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAGASISY 426
+ HQ ++ P+ HG++ + Q T ++ IP +IG GA I+
Sbjct: 208 LTKLHQ-LAMQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINE 265
Query: 427 IRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 266 IRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 305
>gi|425769369|gb|EKV07864.1| hypothetical protein PDIP_71440 [Penicillium digitatum Pd1]
gi|425770994|gb|EKV09451.1| hypothetical protein PDIG_62050 [Penicillium digitatum PHI26]
Length = 364
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 149/358 (41%), Gaps = 50/358 (13%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R +V +++ G IIG+ G+ + + +ET + + PG +R + ++ +
Sbjct: 44 ELTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQ------ 97
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQG 241
+ L R + + GL AP G GG VS +LL+ +Q G++IG+QG
Sbjct: 98 ----LRSLARAYAIVAKGL---LEGAPQMGMGGIVSNNGTHPIRLLISHNQMGTIIGRQG 150
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG L
Sbjct: 151 LKIKHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAIWEIGKCLLDDWQRG 206
Query: 302 SIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPA 361
+ L+ NP + S P P G GY +N RQ A
Sbjct: 207 TGTVLY-------NPA---VRASLSGSQPLNSNPPAGNGYQNNAN----SRQYNRTGNGA 252
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAG 421
D +Y R + + Q T TQ + IP +IG G
Sbjct: 253 DFSD----------GSYNRRSNSDAGNRGYPQVTEDGEEIQTQNISIPADMVGCIIGRGG 302
Query: 422 ASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
I+ IRRSSGA ++I + GE I G+A + A L+ +N AE SQ
Sbjct: 303 TKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTRRSQ 360
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 64/311 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV ++ VG+IIGR+G I++I + TRAR+ + G E+A+ I E +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPE---NCT 245
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A ++ V ++ GL G++S ++L + G +IGK G T+K I +
Sbjct: 246 NACKKIMEVTQQEAYGLSK----------GEISLRILAHNNLIGRIIGKGGTTIKKIMQD 295
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + V D+ F L +R++ V G + KA +I + LR+ +E
Sbjct: 296 TDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISNKLRQS---------YEND 344
Query: 311 MQMPNPQMDHIPP--PQSWGPPQGLP-PSGGPG-YGHNPQYMPPPRQAESYYPPADLPPP 366
+Q PQ P P + G+ S GPG YG P P P Q A LP
Sbjct: 345 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGP--APYPYQ-------ASLP-- 393
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
QGI P TQ T + IP + A+IG+ G+ I
Sbjct: 394 ----TQQGI--------------------PIGDTQETAFLYIPNTSVGAIIGSKGSHIRN 429
Query: 427 IRRSSGATVTI 437
I R SGA+V I
Sbjct: 430 IIRFSGASVKI 440
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGPPGT-TERAVMISAKE 183
E+ F + +P VG+IIG KG I+ I+ + A +KI D P +R V I
Sbjct: 405 ETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVG-- 461
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PES L K +G + + +++ ++LVP++Q G +IGK G
Sbjct: 462 SPESQWKAQ---YLIFEKMREEGFVAGTEDV------RLTIEILVPSTQVGRIIGKGGQN 512
Query: 244 VKSIQEASNCIVRV 257
V+ +Q + I+++
Sbjct: 513 VRELQRVTGSIIKL 526
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 140/328 (42%), Gaps = 59/328 (17%)
Query: 123 WPGWPGESV-----FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+ G PG R+LV + VG+IIGR+G I++I + +RAR+ + G+ E+A
Sbjct: 131 FSGLPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKA 190
Query: 177 VMISAK-EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSG--TGGKVSTKLLVPASQA 233
+ I + ++ ++ + + G D S+ G +++ K+L +
Sbjct: 191 ITIYGNPDNCTNACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNLI 250
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSH 293
G +IGK G T+K I + ++ + V D+ F L +R++ V G + KA +I S
Sbjct: 251 GRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGTIENMSKAESMISSK 308
Query: 294 LRKFLVDRSIIPLFEMHMQMPNPQMDHIPP--PQSWGPPQGLP-PSGGPG-YGHNPQYMP 349
LR+ +E +Q PQ P P + G+ S GPG YG P P
Sbjct: 309 LRQS---------YENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGP--AP 357
Query: 350 PPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
P Q+ Q QG+ P+ TQ T + IP
Sbjct: 358 YPYQS-------------SLQTQQGV--------------------PASDTQETTFLYIP 384
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTI 437
+ A+IGT G+ I I R SGA+V I
Sbjct: 385 NNSVGAIIGTKGSHIRNIIRFSGASVKI 412
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGPP-GTTERAVMISAKE 183
E+ F + +P VG+IIG KG I+ I+ + A +KI D P TER V I
Sbjct: 377 ETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVG-- 433
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PES L K +G S + +++ ++LVP++Q G +IGK G
Sbjct: 434 SPESQWKAQ---YLIFEKMREEGYVSGTEDV------RLTIEILVPSAQVGRIIGKGGQN 484
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
V+ +Q + ++++ + P A ++ V ++G V A I
Sbjct: 485 VRELQRVTGSVIKLSEQQATPPSA-DEETTVHIIGPFFSVQSAQRRI 530
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E F+++ ++G +IG+ G I+ + ET A + + +R + I+A E PES
Sbjct: 128 EITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESR 187
Query: 189 LPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PA + V R V+ G+DS + TG V+ +L+V ++Q G L+GK G
Sbjct: 188 YSPAQKATVLVFSRSVEAGIEKGIDSGLN-----TGSSVTAQLVVSSNQVGCLLGKGGVI 242
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
V +++A+ +R++G + + A +D+VV++ G+ S V A+ LR L
Sbjct: 243 VSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNL 297
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
S +++T T ++ +P V G G++++ +R+ SGA V I E R + T+ +SG
Sbjct: 484 SKSAIVTNTTIEIVVPEDTLYLVYGENGSNLARLRQISGAKVVIHEPRPGTSDRTIVLSG 543
Query: 454 TASQVQTAQQLIQNFMAEAAA 474
+ + Q AQ L+Q F+ ++
Sbjct: 544 SPDETQAAQSLLQAFILNGSS 564
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 159/354 (44%), Gaps = 47/354 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+ GE IKK E++ ARI I D ER V ++ E ++
Sbjct: 21 IRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS--SCAERIVTVTGSTE---AINN 75
Query: 192 AMDGLLR-VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A + + + + + + + + S+ P V+ +L+VPASQ GSLIGK G +K I+E
Sbjct: 76 AFEMITKKFEEDVSNNMANSSTPKP-----PVTLRLVVPASQCGSLIGKGGSKIKEIREN 130
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ V+V G + +R V + G + K + I +
Sbjct: 131 TGASVQVAG----DMLHQSTERAVTISGTPEAITKCVYQICC----------------VM 170
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPADLPPPMEK 369
++ P P+ IP + P + P Y + Y +P P + ++ P +
Sbjct: 171 LESP-PKGATIP----YRPKPTNATATHPAYAVHGNYAVPYPDFMKLHHLTMQHTPFLPG 225
Query: 370 QPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQ---MQIPLSYADAVIGTAGASISY 426
Q + + A +G +NA S + + QQ + IP VIG GA I+
Sbjct: 226 Q-----TPFTPTALNMGYGVANAASAGTQVATTGQQTYEIMIPNDLIGCVIGRGGAKINE 280
Query: 427 IRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF--MAEAAAPSQA 478
IR+ SGAT+ I ++ + +V ISGT + A LI + +A+ AP A
Sbjct: 281 IRQISGATIKIANSQEGSNDRSVTISGTVEAINLAHFLINSSLELAKNLAPELA 334
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G+ + +++P +G +IGR G I +I + + A IKI + G+ +R+V IS E +
Sbjct: 254 GQQTYEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQEGSNDRSVTISGTVEAIN 313
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPS 216
++ L + K + L + ++ P+
Sbjct: 314 LAHFLINSSLELAKNLAPELAAKANLIPT 342
>gi|116180584|ref|XP_001220141.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185217|gb|EAQ92685.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 485
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 150/378 (39%), Gaps = 66/378 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + KI + + A+ + D G ER + +S
Sbjct: 127 VRAVISSPEAATIIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSG---------- 176
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ PS K +LL+P GS+IGK G +K IQEA
Sbjct: 177 IVDAVAKAFGLIIRTLNNEPLGEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEA 236
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
S L A D L +R + V+G A VH A +GS L + L +R
Sbjct: 237 SGA---RLNASD-SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGASASAY 292
Query: 302 ---------------SIIPLF------------EMHMQMPNPQMDHIPPPQSWGPPQGLP 334
+IP H P+P+ H+ PPQ++ PPQ
Sbjct: 293 ATRSGGPAGAVPGGMQVIPYNPQPAGGNFGNRDNYHRGRPDPRAHHM-PPQAY-PPQ--- 347
Query: 335 PSGGPGYGHNPQYMP---PPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSN 391
YGH Q P P + QPH A G P HG
Sbjct: 348 ------YGHPHQPHPNPAAPMPYGGHAAAGGYGAGPHVQPHPAGPA-GPHGPAGPHGQPM 400
Query: 392 AQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEI 451
+TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V I
Sbjct: 401 PGGAAVPGGPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTI 460
Query: 452 SGTASQVQTAQQLIQNFM 469
+GT + A ++ + +
Sbjct: 461 TGTEECNRMALYMLYSRL 478
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E F+++ ++G +IG+ G I+ + ET A + + +R + I+A E PES
Sbjct: 330 EITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESR 389
Query: 189 LPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PA + V R V+ G+DS + TG V+ +L+V ++Q G L+GK G
Sbjct: 390 YSPAQKATVLVFSRSVEAGIEKGIDSGLN-----TGSSVTAQLVVSSNQVGCLLGKGGVI 444
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
V +++A+ +R++G + + A +D+VV++ G+ S V A+ LR L
Sbjct: 445 VSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNL 499
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 26/201 (12%)
Query: 117 GSTEKKWPGWP---------GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD 167
GS+++ P P G FR+L + ++G +IG+ G IK + T A+I+I D
Sbjct: 26 GSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIED 85
Query: 168 GPPGTTERAVMISAKEEPESS--------------LPPAMDGLLRVHKRIVDGLDSDSSH 213
P + +R +M+ + + A + LLRV RI++ + ++
Sbjct: 86 SPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILE-VAAEMEG 144
Query: 214 APSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRV 273
G VS +L+ ++QAGS+IGK G V+ I++ + C + V ++LP D V
Sbjct: 145 IELGD-RTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEV 202
Query: 274 VEVVGDASGVHKAMELIGSHL 294
+E+ G S V KA+ + +L
Sbjct: 203 IEIEGSVSSVKKALVAVSRNL 223
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
S +++T T ++ +P V G G++++ +R+ SGA V I E R + T+ +SG
Sbjct: 686 SKSAIVTNTTIEIVVPEDTLYLVYGENGSNLARLRQISGAKVVIHEPRPGTSDRTIVLSG 745
Query: 454 TASQVQTAQQLIQNFMAEAAA 474
+ + Q AQ L+Q F+ ++
Sbjct: 746 SPDETQAAQSLLQAFILNGSS 766
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 156/373 (41%), Gaps = 94/373 (25%)
Query: 102 SQLQEKQENEVNLAVGSTEKKWPGWPGESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETR 160
S+L + + + L S+ K+ P ESV FR+L PA + G+IIG+ G I+ + T
Sbjct: 214 SKLLQSKFDSGRLMEFSSSKR-PATAAESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTG 272
Query: 161 ARIKILDGPPG-TTERAVMISA-------------KEEPESSLPPAMDG----------- 195
++I+++D P + ER V+I A E P S P G
Sbjct: 273 SKIRVIDDIPVPSEERVVLIIAPSGKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDD 332
Query: 196 ----------LLRVHKRIVDGLDSDSSHAPSGTGGKVST--KLLVPASQAGSLIGKQGGT 243
LLRV +RIV G D+ S G+ + +++V +Q L+ K G
Sbjct: 333 EEAPSSAQMALLRVLERIVFGDDAASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKM 392
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
++ I+E S IVR+ + +P A D V+++ G S V KA+ LI + L++ S
Sbjct: 393 IQRIREDSGAIVRISSTDQIPPCAFPGDVVIQITGKFSSVKKALLLITNCLQE-----SG 447
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
P P D P PQ PGY PP + Y+P D
Sbjct: 448 AP----------PTWDECPFPQ-------------PGY-------PPDYHSMEYHPQWDH 477
Query: 364 PP-PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
PP PM P + P N P + +V+ ++ P ++IG GA
Sbjct: 478 PPNPM---PEDVV-------PFN---------RPVVEEEVSFRLLCPADKVGSLIGKGGA 518
Query: 423 SISYIRRSSGATV 435
+ ++ SGA++
Sbjct: 519 VVRALQNESGASI 531
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQET-----RGVPGEMTVEISGTASQVQTAQQLIQN 467
D ++ G I IR SGA V I T PG++ ++I+G S V+ A LI N
Sbjct: 382 VDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPGDVVIQITGKFSSVKKALLLITN 441
Query: 468 FMAEAAAP 475
+ E+ AP
Sbjct: 442 CLQESGAP 449
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 22/91 (24%)
Query: 74 PEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFR 133
P+ H E DH P + +PED+VP + + E+ E FR
Sbjct: 464 PDYHSMEYHPQWDH-PPNPMPEDVVPFNRPVVEE---------------------EVSFR 501
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIK 164
+L PA KVGS+IG+ G ++ + E+ A IK
Sbjct: 502 LLCPADKVGSLIGKGGAVVRALQNESGASIK 532
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 163/365 (44%), Gaps = 66/365 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
++++ V+V G + LP ++ + + G V + ++ I + +
Sbjct: 124 RKSTGAQVQVAG-DMLPN---STEQAITIAGMPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 168 ETISQSPQGRVMTIPYQPMPASSP--VICAGGQDRYSNTAGYPHATHDLEGPPLDAYSIQ 225
Query: 358 -------YPPADLPPPMEKQPH-------QGISAYGREAP-VNVHGSSNAQSTPSMITQV 402
A+L +Q H G + +P V + +S ST Q
Sbjct: 226 GQHTISPLHLANLNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLDAST-----QT 280
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTA 461
T ++ IP + +IG G +I+ IR+ SGA + I G G V I+G+A+ + A
Sbjct: 281 THELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLA 339
Query: 462 QQLIQ 466
Q LI
Sbjct: 340 QYLIN 344
>gi|242020720|ref|XP_002430800.1| predicted protein [Pediculus humanus corporis]
gi|212515997|gb|EEB18062.1| predicted protein [Pediculus humanus corporis]
Length = 515
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 146/349 (41%), Gaps = 61/349 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV + VG+IIGR+G I++I ++TRAR+ + G+ E+A+ I
Sbjct: 116 LRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNP------- 168
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
D K+I++ + +++S+ G++S K+L + G +IGK G T+K I +
Sbjct: 169 ---DNCTNACKKILEVMQAEASNTNK---GEISLKILAHNNLIGRIIGKGGNTIKRIMQD 222
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + V D+ F L +R++ V G + +A I + LR+ +E
Sbjct: 223 TDSKITVSSINDINSFNL--ERIITVKGTIDNMSRAESEISAKLRQ---------SYEND 271
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
+Q PQ P P + + GY P Y A +P
Sbjct: 272 LQAMAPQTMMFPGLH----PMAMMSTNNMGYSSRPGAF-----GGVYGSGAPIPYSPIYP 322
Query: 371 ---PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYI 427
P QG S G +Q T + IP S A+IGT G I I
Sbjct: 323 PAGPQQGPSQGGD-------------------SQETTFLFIPNSAVGAIIGTKGTHIRNI 363
Query: 428 RRSSGATVTI---QETRGV--PGEMTVEISGTASQVQTAQQLIQNFMAE 471
R SGA+V I ++ +G P E V I GT AQ LI M E
Sbjct: 364 IRFSGASVKIASLEQEKGTEPPAERKVTIVGTPESQWKAQYLIFEKMRE 412
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 153/346 (44%), Gaps = 51/346 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K + EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVK-MREESGARINISEG--NCPERII----------TLAG 62
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 63 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 122
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 123 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 166
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPP--SGGPGYGHNPQYMPPPRQAESYYPPA---- 361
E Q P P+ IP W P P +GG Y QY P + A
Sbjct: 167 ETLSQSP-PKGVTIP---YWPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 222
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIGTA 420
P GI + E G ++AQ+T + ++ IP +IG
Sbjct: 223 HFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTT-------SHELTIPNDLIGCIIGRQ 275
Query: 421 GASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 276 GAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 321
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 10/145 (6%)
Query: 158 ETRARIKILDGPPGTTERAVMI--SAKE-----EPESSLPPAMDGLLRVHKRIVDGLDSD 210
+T+A+I+I + G ER + I S++E + E + PA D L RVH+++ +D D
Sbjct: 4 DTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEKL--SIDDD 61
Query: 211 SSHAPSGTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQ 269
+ S G +V+ +LLVP+ Q G +IGK G ++ I+ + +RVL E+LP A+
Sbjct: 62 IGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAIS 121
Query: 270 DDRVVEVVGDASGVHKAMELIGSHL 294
D ++++ GD++ V KA+ + S L
Sbjct: 122 GDELLQISGDSTVVRKALLQVSSRL 146
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 7/173 (4%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E R+L A VG +IG+ G IK+I +E+ A IK+ D + + +SAKE E
Sbjct: 215 EFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKV-DSSNTEDDCIITVSAKEFFEDP 273
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ P ++ + + R + D +S+ PS T T+LLV S+ G LIGK G + I+
Sbjct: 274 VSPTINAAVHLQPRCSEKTDPESA-IPSYT-----TRLLVSTSRIGCLIGKGGSIITEIR 327
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
S +R+L E++P A +D+ +V++ GD V A+ I + L+ +R
Sbjct: 328 RTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFFER 380
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP-----GEMTVEISG 453
+ QVT ++ +P +IG G I IR +GA + + +P G+ ++ISG
Sbjct: 71 LAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISG 130
Query: 454 TASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
++ V+ A + + + + + SQ + +S Q Y P S GS + P
Sbjct: 131 DSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPY-PVGSHLGSSSTAP 178
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 152/360 (42%), Gaps = 62/360 (17%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
PG RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 12 PGLSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG-- 67
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIG 238
+ + I LD D A + GG +S +L++PASQ GSLIG
Sbjct: 68 --------STAAVFHAVSMIAFKLDEDLCSA-TANGGNISRPPVTLRLVIPASQCGSLIG 118
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
K G +K I+E + V+V G + LP +R V V SGV A+ L
Sbjct: 119 KAGTKIKEIRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------IL 161
Query: 299 VDRSIIPLFEMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
R I + ++ P P+ IP P S G + S G+ QY
Sbjct: 162 CVRQICAVI---LESP-PKGATIPYHPSLSLGT---VLLSANQGFSVQGQY--------G 206
Query: 357 YYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416
PA++ + H A +P V G T S Q+ +P V
Sbjct: 207 AVTPAEVTKLQQLSGH----AVPFASPGMVPGLDPGAQTSS------QEFLVPNDLIGCV 256
Query: 417 IGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
IG G+ IS IR+ SGA + I GE V I+G+ + AQ LI + A + S
Sbjct: 257 IGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTS 316
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 151/354 (42%), Gaps = 43/354 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE +K+ EE+ A+I I D ER V +S S
Sbjct: 24 IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTVSG------SRSA 75
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ K+ + +A + ++ +L+VPASQ GSLIGK G +K I+E +
Sbjct: 76 IYKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEIREIT 135
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
C ++V +E LP +R V + G A + + + I + + + IP
Sbjct: 136 GCSIQV-ASEMLPN---STERAVTLSGSAEAITQCIYHICCVMLESPPKGATIPY----- 186
Query: 312 QMPNPQMDH---IPPPQSWGPPQG---LPPSGGPGYGHNPQYMPP--------PRQAESY 357
P PQ++ + Q++ QG +P G NP P
Sbjct: 187 -RPKPQVNGPVIVANGQAY-TIQGNYAVPAQEVSGIAKNPLAGLAALGLAGAIPSNTGGL 244
Query: 358 YPPADLPPP--MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
P P +E PH ++A A + ++N P + + +M +P
Sbjct: 245 NPTGKYSSPNALEYIPHAALAAL---AGSQLRTNNNRNVAP--VQSQSHEMTVPNDLIGC 299
Query: 416 VIGTAGASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA + I +E + T+ I+G V AQ LI
Sbjct: 300 IIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLIN 353
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 155/355 (43%), Gaps = 70/355 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S K V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPS-------GGPGYGHNPQYMPPPRQAESYYPP 360
E Q+ ++ PP+ P PS GG Y QY P +
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 361 ADLPP--PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
A PM + G S G +A +AQ+T + ++ IP +IG
Sbjct: 215 AMQQSHFPMSHSGNTGFSG-GIDA--------SAQAT-------SHELTIPNDLIGCIIG 258
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
GA I+ IR+ SGA + I + V I+G+ + + AQ LI ++ A
Sbjct: 259 RQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLINVRLSSEA 313
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 148/365 (40%), Gaps = 71/365 (19%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P GE V R+L PA K+G +IG+ G IK I +E+ ARI + D E + I++ E
Sbjct: 116 PKCSGELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNE 175
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+ + A++ +L + +I D D++ GKV G LIGK G
Sbjct: 176 ATDDAKSAAVEAVLLLQSKIND--DNE---------GKV----------IGCLIGKGGSI 214
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
V ++ + + + E P A D +VEV G+ + A+ I LR ++ S+
Sbjct: 215 VNDMRSKTKAAIYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSV 273
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
N + D G P A SY PA L
Sbjct: 274 --------DRQNSEKD----------------------GKLTVATTDPLYASSYPLPALL 303
Query: 364 PPPMEKQP----HQGISAYGREA--PVNVHGSSNAQSTPSMITQVT-------------Q 404
P + P H+G G E +++G S+ Q+ + V+
Sbjct: 304 PYRQQITPLGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHM 363
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
+M IP S V+G G ++ I + SGA + I E++ ISGT Q Q+A+ L
Sbjct: 364 EMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENL 423
Query: 465 IQNFM 469
I+ F+
Sbjct: 424 IKAFI 428
>gi|403417714|emb|CCM04414.1| predicted protein [Fibroporia radiculosa]
Length = 420
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 154/385 (40%), Gaps = 95/385 (24%)
Query: 101 DSQLQEKQENEVNLAVGSTEKKWPGWPGESV-FRMLVPAQKVGSIIGRKGEFIKKIVEET 159
D+ ++ ++ + A ST P ++ R L+ Q IIG+ G + +I E++
Sbjct: 90 DAHVKLEEGSATTSAAPSTSSATGAAPAANIHMRCLIVTQDASIIIGKGGSHVNEIREKS 149
Query: 160 RARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG 219
AR+ + + PG ER + +S +D + + IV ++ + PS G
Sbjct: 150 SARVMVSESIPGNPERILNVSGP----------LDAVSKAFGLIVRRINDEPFDKPSVPG 199
Query: 220 GK-VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVG 278
+ V+ K ++P S+ GS+IGK G +K IQ+AS R+ +E + +RV+ V G
Sbjct: 200 SRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGA--RLNASEGM--LPGSTERVLSVSG 255
Query: 279 DASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMP--NPQMDHIPPPQSWGPPQGLPPS 336
A +H A IG+ L E + ++P N + P S P PP+
Sbjct: 256 VADAIHIATYYIGN------------ILIEANERLPSYNNSSYYRPSSNSRRP----PPN 299
Query: 337 GG---PGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQ 393
G PGY + YP + PP + Q
Sbjct: 300 GSSYVPGYSNT-------------YPGSSHGPPQQLQ----------------------- 323
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE-------TRGVP-- 444
TQQ+ IP +IG G+ I+ IR S + + I E G P
Sbjct: 324 ---------TQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIMEPGAVGVGMNGAPAP 374
Query: 445 ----GEMTVEISGTASQVQTAQQLI 465
GE V I+G + +Q A QL+
Sbjct: 375 AGGEGERLVVITGQPANIQMAVQLL 399
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQ 459
VT + IP S +VIG GA I I+ +SGA + E +PG E + +SG A +
Sbjct: 203 VTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGM-LPGSTERVLSVSGVADAIH 261
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNPGHAGHAGGYGSVY-GSN 518
A I N + EA ++ + + Y +S PP P + + GY + Y GS+
Sbjct: 262 IATYYIGNILIEA----NERLPSYNNSSYYRPSSNSRRPP--PNGSSYVPGYSNTYPGSS 315
Query: 519 YG 520
+G
Sbjct: 316 HG 317
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 134/311 (43%), Gaps = 64/311 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV ++ VG+IIGR+G I++I + TRAR+ + G E+A+ I E +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPE---NCT 245
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A ++ V ++ GL G++S ++L + G +IGK G T+K I +
Sbjct: 246 NACKKIMEVTQQEAYGLSK----------GEISLRILAHNNLIGRIIGKGGTTIKKIMQD 295
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + V D+ F L +R++ V G + KA +I S LR+ +E
Sbjct: 296 TDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISSKLRQS---------YEND 344
Query: 311 MQMPNPQMDHIPP--PQSWGPPQGLP-PSGGPG-YGHNPQYMPPPRQAESYYPPADLPPP 366
+Q PQ P P + G+ S GPG YG P P P Q LP
Sbjct: 345 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGP--APYPYQ-------TSLP-- 393
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
QGI P TQ T + IP + A+IG+ G+ I
Sbjct: 394 ----TQQGI--------------------PIGDTQETAFLYIPNTSVGAIIGSKGSHIRN 429
Query: 427 IRRSSGATVTI 437
I R SGA+V I
Sbjct: 430 IIRFSGASVKI 440
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGP-PGTTERAVMISAKE 183
E+ F + +P VG+IIG KG I+ I+ + A +KI D P +R V I
Sbjct: 405 ETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVG-- 461
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PES ++ + G D +++ ++LVP++Q G +IGK G
Sbjct: 462 SPESQWKAQYLIFEKMREEGFVGGTEDV---------RLTIEILVPSTQVGRIIGKGGQN 512
Query: 244 VKSIQEASNCIVRV 257
V+ +Q + I+++
Sbjct: 513 VRELQRVTGSIIKL 526
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 134/311 (43%), Gaps = 64/311 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV ++ VG+IIGR+G I++I + TRAR+ + G E+A+ I E +
Sbjct: 139 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPE---NCT 195
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A ++ V ++ GL G++S ++L + G +IGK G T+K I +
Sbjct: 196 NACKKIMEVTQQEAYGLSK----------GEISLRILAHNNLIGRIIGKGGTTIKKIMQD 245
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + V D+ F L +R++ V G + KA +I S LR+ +E
Sbjct: 246 TDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISSKLRQS---------YEND 294
Query: 311 MQMPNPQMDHIPP--PQSWGPPQGLP-PSGGPG-YGHNPQYMPPPRQAESYYPPADLPPP 366
+Q PQ P P + G+ S GPG YG P P P Q LP
Sbjct: 295 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGP--APYPYQ-------TSLP-- 343
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
QGI P TQ T + IP + A+IG+ G+ I
Sbjct: 344 ----TQQGI--------------------PIGDTQETAFLYIPNTSVGAIIGSKGSHIRN 379
Query: 427 IRRSSGATVTI 437
I R SGA+V I
Sbjct: 380 IIRFSGASVKI 390
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGP-PGTTERAVMISAKE 183
E+ F + +P VG+IIG KG I+ I+ + A +KI D P +R V I
Sbjct: 355 ETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVG-- 411
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PES L K +G + +++ ++LVP++Q G +IGK G
Sbjct: 412 SPESQWKAQ---YLIFEKMREEGFVGGTEDV------RLTIEILVPSTQVGRIIGKGGQN 462
Query: 244 VKSIQEASNCIVRV 257
V+ +Q + I+++
Sbjct: 463 VRELQRVTGSIIKL 476
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 151/355 (42%), Gaps = 45/355 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI + +G ER V I+
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG--NCPERIVTITGPT-------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D ++ S + V+ +L+VPASQ GSLIGK G +K +
Sbjct: 68 --DAIFKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 126 RESTGAQVQVAG-DMLPN---STERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 308 EMHMQMP------NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPA 361
P + D + P + L P Y QY P + A
Sbjct: 182 PKPATAPVIFSGGQVRADTLTAPATANLSLLLQHQPLPAYTIQGQYAIPHPDLTKLHQLA 241
Query: 362 DLPPPMEKQPHQGISAYGREAPV--NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGT 419
M++ P ++ G+ P V SS A T ++ IP +IG
Sbjct: 242 -----MQQTP---FTSLGQTTPAFPGVDASSQAS---------THELTIPNDLIGCIIGR 284
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAA 474
G I+ IR+ SGA + I + + I+GT + + AQ LI + AA
Sbjct: 285 QGTKINEIRQMSGAQIKIANAMEGSSDRQITITGTPANISLAQYLINARFRDVAA 339
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV---------- 177
G FR+L A ++G +IG+ G IK + ++T A+++I D P + +R +
Sbjct: 34 GHVSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSA 93
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
++ ++ E + + L+RV +RI++ +SDS G VS ++L S G++
Sbjct: 94 VVFSRIESAVEVSKGQEALVRVFERILEVAAESDSV-----ADGVVSCRMLAEVSSVGAV 148
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
IGK G V+ I++ C ++VL + LP A ++ ++E+ GD S V K + + L
Sbjct: 149 IGKGGKVVEKIRKDCGCRIKVL-VDKLPDCAASNEEMIEIEGDVSAVKKGLVAVSRCL 205
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P + VFR+L ++G +IG+ G ++ + ET A I + ER + ++A E PE
Sbjct: 297 PQQLVFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPE 356
Query: 187 SSLPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
S A ++ V R V+ GLD SS G V+ +L+V SQ G L+GK G
Sbjct: 357 SRYSAAQKTIVLVFSRAVESGIEKGLDPGSSR-----GSPVTARLVVSPSQVGCLLGKGG 411
Query: 242 GTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
+ +++A++ +R++ G + P + D VVE+ GD V A+ + LR L
Sbjct: 412 TIISEMRKATSTSIRIIVGDQRNPKCVPETDHVVEISGDFVNVKDAIYHVTGRLRDNL 469
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 340 GYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHG---SSNAQSTP 396
G H+ P PR S P P +GIS R P G S +S
Sbjct: 595 GLSHSLDRPPSPRLWASQTIPRVNP--------RGISDVSRRLPSLKAGLELGSGGKS-- 644
Query: 397 SMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTAS 456
+ +T T ++ +P + +V G G++++ +R+ SGA V + E R + V ISGT
Sbjct: 645 AFVTNTTVEIVVPENAFGSVYGENGSNLARLRQISGAKVIVHEPRLGTSDRIVVISGTPD 704
Query: 457 QVQTAQQLIQNFM 469
+ Q AQ L+Q F+
Sbjct: 705 ETQAAQSLLQAFI 717
>gi|255719726|ref|XP_002556143.1| KLTH0H06050p [Lachancea thermotolerans]
gi|238942109|emb|CAR30281.1| KLTH0H06050p [Lachancea thermotolerans CBS 6340]
Length = 392
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 160/390 (41%), Gaps = 63/390 (16%)
Query: 100 EDSQLQEKQENEVN-LAVGSTEKKWPGWPGESV------FRMLVPAQKVGSIIGRKGEFI 152
ED Q +E E E+ +A+ TE+ PG + RML ++ I+G GE I
Sbjct: 22 EDCQ-EELLEAEIKRVALDDTEE--TNDPGNEINKDYIHLRMLCLVKQASMIVGPGGEKI 78
Query: 153 KKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSS 212
++ EET RI + D G ER + I + E + +V +V ++ ++
Sbjct: 79 SRMKEETNTRINVSDNIRGVPERVIFIRGRCED----------VAKVFGMVVRAINGETD 128
Query: 213 HAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDR 272
S ++ +L+P G +IG+QG ++ I+E S + + G + LP + +DR
Sbjct: 129 GESSEQSATLTLNILIPHHMMGCVIGRQGSRLREIEELSAAKL-MAGPQTLP---MSNDR 184
Query: 273 VVEVVGDASGVHKAMELIG----SHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWG 328
++ V G A +H A +G +H F + I L P + H S+G
Sbjct: 185 ILCVSGVADAIHIATYYVGQTILNHKATFASKKCIFYL---------PSLLHSVLVNSYG 235
Query: 329 PP-------QGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGRE 381
Q P G H +Y P +Y P + PH +
Sbjct: 236 VSLQHQQQHQYRPGENGKKRLH--RYSASPDFGYAY-------PGVPSAPHMAVH----- 281
Query: 382 APVNVHGSSNAQSTPSM----ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI 437
V V + A + P ++ + Q++ I +Y VIG G I+ I+ ++G ++ I
Sbjct: 282 -NVRVADTLAAATIPPALAPQLSLIQQEVYIDDNYVGNVIGKGGKHINSIKETTGCSIQI 340
Query: 438 QETRGVPGEMTVEISGTASQVQTAQQLIQN 467
+ E + I GT QTA LI N
Sbjct: 341 DDHVEGCSERKILIRGTPIGSQTAILLINN 370
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 152/351 (43%), Gaps = 64/351 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPS-------GGPGYGHNPQYMPPPRQAESYYPP 360
E Q+ ++ PP+ P PS GG Y QY P +
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 361 A----DLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADA 415
A P GI + E G ++AQ+T + ++ IP
Sbjct: 215 AMQQSHFPMSHGNTGFSGIESSSPEVKGYWAGLDASAQTT-------SHELTIPNDLIGC 267
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 268 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 318
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 152/357 (42%), Gaps = 66/357 (18%)
Query: 121 KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMI 179
++ P +P R+LV ++ VG+IIGR+G I++I ++TRAR+ + G+ E+A+ I
Sbjct: 6 QRQPDFP----LRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENVGSLEKAITI 61
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
PE+ +R+++ + ++ + G++S K+L + G +IGK
Sbjct: 62 YGN--PENCTNAC--------RRVLEVMQQEADNTNK---GEISLKILAHNNLIGRIIGK 108
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV 299
G T+K + + + V D+ F + +RV+ + G + +A +I + LR+
Sbjct: 109 GGSTIKRVMLETETKITVSSLNDVSSFNM--ERVITIKGTIDNMSRAEGMISAKLRQS-- 164
Query: 300 DRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYP 359
+E +Q PQ P P + + G G+ + + PP A YP
Sbjct: 165 -------YESDLQAMAPQSMMFPGLH----PMAMMSTVGMGFSPSVRGTPPA-AAPGMYP 212
Query: 360 PADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGT 419
P P Y + P V +S + IP S A+IGT
Sbjct: 213 PGAAP-------------YAQAGPAGVGETSF--------------LYIPNSAVGAIIGT 245
Query: 420 AGASISYIRRSSGATVTIQE----TRGVP-GEMTVEISGTASQVQTAQQLIQNFMAE 471
G+ I I R SGA+V I T P E V I GT AQ LI M E
Sbjct: 246 RGSHIRNIIRFSGASVKITSLPEGTTAEPQAERKVTIVGTPEAQWKAQYLIFEKMRE 302
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 17/139 (12%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTT-----ERAVM 178
P GE+ F + +P VG+IIG +G I+ I+ + A +KI P GTT ER V
Sbjct: 223 PAGVGETSF-LYIPNSAVGAIIGTRGSHIRNIIRFSGASVKITSLPEGTTAEPQAERKVT 281
Query: 179 ISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
I E + + I + + + P+G +++ +LLV +SQ G +IG
Sbjct: 282 IVGTPEAQ----------WKAQYLIFEKMREEG-FMPAGEDVRLTVELLVASSQVGRIIG 330
Query: 239 KQGGTVKSIQEASNCIVRV 257
K G V+ +Q ++ ++++
Sbjct: 331 KGGQNVREMQRTTSSVIKL 349
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 147/354 (41%), Gaps = 77/354 (21%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV ++ VG+IIGR+G I++I + +RAR+ + G+ E+A+ I E +S
Sbjct: 128 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYGNPENCTS-- 185
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
KRI++ + ++++ G++ K+L + G +IGK G T+K I +
Sbjct: 186 --------ACKRILEVMQQEANNT---NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 234
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + V D+ F L +R++ V G + + I + LR+ +E
Sbjct: 235 TDTKITVSSINDINSFNL--ERIITVKGSIDNMSRGESQISAKLRQS---------YEND 283
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPA--DLPPPM 367
+Q PQ P P + + G G G + M P Y PP +PP
Sbjct: 284 LQALAPQSIMFPGLH----PMAMMSTAGNGMGFAGRSGMYPGSSYPMYQPPTAPGVPP-- 337
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYI 427
GSS+ Q T + IP + A+IGT G+ I I
Sbjct: 338 --------------------GSSDVQETT--------YLYIPNNAVGAIIGTKGSHIRNI 369
Query: 428 RRSSGATVTI----------QETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
R SGA+V I Q+T E V I GT AQ LI M E
Sbjct: 370 IRFSGASVKIAPLEADKPLEQQT-----ERKVTIVGTPEAQWKAQYLIFEKMRE 418
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGP-PGTTERAVMISAKEEPESS 188
+ +P VG+IIG KG I+ I+ + A +KI D P TER V I E +
Sbjct: 348 LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWK 407
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ +R + V G D +++ ++LVP++Q G +IGK G V+ +Q
Sbjct: 408 AQYLIFEKMR-EEGFVSGTDDV----------RLTVEILVPSAQVGRIIGKGGQNVRELQ 456
Query: 249 EASNCIVRV 257
+ I+++
Sbjct: 457 RVTGSIIKL 465
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 152/351 (43%), Gaps = 64/351 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPS-------GGPGYGHNPQYMPPPRQAESYYPP 360
E Q+ ++ PP+ P PS GG Y QY P +
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 361 A----DLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADA 415
A P GI + E G ++AQ+T + ++ IP
Sbjct: 215 AMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTT-------SHELTIPNDLIGC 267
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 268 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 318
>gi|212529012|ref|XP_002144663.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210074061|gb|EEA28148.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 461
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 151/367 (41%), Gaps = 55/367 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ +Q+ + IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 106 IRAVISSQEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQ-------- 157
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 158 --DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEA 215
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A + L + L +R P +
Sbjct: 216 SGA---RLNASDA-CLPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 271
Query: 311 --------------MQM--------------PNPQMDHIPPPQSWGP-PQGLP-PSGGPG 340
MQ+ P+ H P GP P G P P GGP
Sbjct: 272 ATRSGGPAGVVPGGMQVVPYVPQPAGGQYGHPDSARRHYPQNNRPGPGPYGAPYPHGGPA 331
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAP-VNVHGSSNAQSTPSMI 399
P PP Y A P PHQ + YG AP HG+S +
Sbjct: 332 -AQAPVTQPP----LHYGGGAARAPYAGAGPHQP-APYG--APHAQPHGASTQPLAGVVS 383
Query: 400 TQ-VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
+Q +TQQ+ IP A+IG G I+ IR SG+ + I E + E V I+GT
Sbjct: 384 SQPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQENSNERLVTITGTQECN 443
Query: 459 QTAQQLI 465
Q A ++
Sbjct: 444 QMALYML 450
>gi|451847129|gb|EMD60437.1| hypothetical protein COCSADRAFT_99089 [Cochliobolus sativus ND90Pr]
Length = 364
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 159/368 (43%), Gaps = 69/368 (18%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET R + G +R + ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTG--------- 96
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
++ G+ + + GL AP+ G GG + T +LL+ +Q G++IG+QG
Sbjct: 97 -SLSGISKAYGLAAKGL---LEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLK 152
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+AS VR++ +++ +RVVEV G +G+ KA+ IG K L+D
Sbjct: 153 IKQIQDASG--VRMVAQKEM--LPQSTERVVEVQGSPAGIEKAVWEIG----KCLIDDHE 204
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQ--GLPPSGGPG------YGHNPQY--MPPPRQ 353
+ + NP + + P GP G P+GG G GH + PP
Sbjct: 205 RGYGTV---LYNPAV-RVQPGVGPGPAANGGSAPAGGMGGRSYNRTGHGADFSDSPPAFS 260
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
S A PPP P + Q TQ + IP
Sbjct: 261 RRSGSDAASRPPP----------------PTHTEDGEEMQ---------TQNISIPSDMV 295
Query: 414 DAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAE 471
+IG G+ IS IR++S A ++I + GE I+G+AS + A L+ +N AE
Sbjct: 296 GCIIGRGGSKISEIRKTSNARISIAKAPHDDTGERMFTITGSASANEKALYLLYENLEAE 355
Query: 472 AAAPSQAQ 479
SQAQ
Sbjct: 356 KMRRSQAQ 363
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 152/351 (43%), Gaps = 64/351 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPS-------GGPGYGHNPQYMPPPRQAESYYPP 360
E Q+ ++ PP+ P PS GG Y QY P +
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 361 A----DLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADA 415
A P GI + E G ++AQ+T + ++ IP
Sbjct: 215 AMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTT-------SHELTIPNDLIGC 267
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 268 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 318
>gi|268567874|ref|XP_002640100.1| Hypothetical protein CBG12588 [Caenorhabditis briggsae]
Length = 398
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 169/414 (40%), Gaps = 75/414 (18%)
Query: 92 QVPEDIVPEDSQLQEKQENEVNLAVGSTE---KKWPGWP-----GESVFRMLVPAQKVGS 143
+VP ++ DS K+E+E + S+ +K G+ G+ R+LV ++ G+
Sbjct: 4 KVPTSVIGTDSPKAMKREHENDEGDRSSRHKRQKTDGFTEAIQQGKFEVRLLVSSKSAGA 63
Query: 144 IIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRI 203
IIG+ GE IK++ E A +++ D T ER ++A E+ +L + K +
Sbjct: 64 IIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADEKT----------VLNILKDV 111
Query: 204 VDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAED 262
+ L D+ S P ++L+ S AG+LIG+ G +K ++E + +++
Sbjct: 112 LPRLEDNFSERDP------CEVRVLIHQSHAGALIGRNGTKIKELREKCSARLKIFTG-- 163
Query: 263 LPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF-EMHMQMPN-PQMDH 320
DRV+ G+ V +E + L++ + S P H N +
Sbjct: 164 --CAPGSTDRVLITSGEQKNVLAIIEEVMKELKEIPIKGSATPYLPSFHYDPSNISEYGG 221
Query: 321 IPPPQSWGPPQ-----------------------GLPPSGGP-----GYGHNPQYMPPPR 352
P S G PQ + P GGP G H + P P
Sbjct: 222 FPGNVSGGGPQNNRGPAPPRGGQGPPGGPRSYGGAITPGGGPRSFEAGDFHQFRGGPVPG 281
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
Q P PP QG +G AP N + T Q+ IP
Sbjct: 282 QYSMNAPGYAQGPP------QG--QFG--APANAGYGYGPGGGGPV---TTAQVTIPSDL 328
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG G I+ IR+ SGA +T++ + G P E + I GT Q+ +AQ L+Q
Sbjct: 329 GGTIIGRGGERIARIRQESGAQITLEPSNGQP-ERIITIKGTEQQIHSAQYLLQ 381
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 134/311 (43%), Gaps = 64/311 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV ++ VG+IIGR+G I++I + TRAR+ + G E+A+ I E +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPE---NCT 245
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A ++ V ++ GL G++S ++L + G +IGK G T+K I +
Sbjct: 246 NACKKIMEVTQQEAYGLSK----------GEISLRILAHNNLIGRIIGKGGTTIKKIMQD 295
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + V D+ F L +R++ V G + KA +I S LR+ +E
Sbjct: 296 TDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISSKLRQS---------YEND 344
Query: 311 MQMPNPQMDHIPP--PQSWGPPQGLP-PSGGPG-YGHNPQYMPPPRQAESYYPPADLPPP 366
+Q PQ P P + G+ S GPG YG P P P Q LP
Sbjct: 345 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGTGP--APYPYQ-------TSLP-- 393
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
QGI P TQ T + IP + A+IG+ G+ I
Sbjct: 394 ----TQQGI--------------------PIGDTQETAFLYIPNTSVGAIIGSKGSHIRN 429
Query: 427 IRRSSGATVTI 437
I R SGA+V I
Sbjct: 430 IIRFSGASVKI 440
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGP-PGTTERAVMISAKE 183
E+ F + +P VG+IIG KG I+ I+ + A +KI D P +R V I
Sbjct: 405 ETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVG-- 461
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PES L K +G + +++ ++LVP++Q G +IGK G
Sbjct: 462 SPESQWKAQ---YLIFEKMREEGFVGGTEDV------RLTIEILVPSTQVGRIIGKGGQN 512
Query: 244 VKSIQEASNCIVRV 257
V+ +Q + I+++
Sbjct: 513 VRELQRVTGSIIKL 526
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 153/337 (45%), Gaps = 50/337 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+ P ++
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDTI-- 70
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + + + + S++P+ + V+ +L+VPASQ GSLIGK G +K ++E++
Sbjct: 71 -FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 130 GAQVQVAG-DMLPN---STERAVTISGTPEAIIQCVKQICVVMLESPPKGATIP------ 179
Query: 312 QMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPADLPPPMEKQ 370
+ P P S + SGG Y QY +P P Q + A M++
Sbjct: 180 --------YRPKPAST----PVIFSGGQAYTIQGQYAIPHPDQLTKLHQLA-----MQQT 222
Query: 371 PHQGISAYGREAPV--NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
P + G+ P + + A T ++ IP +IG G I+ IR
Sbjct: 223 PF---TPLGQTTPAFPGLDAAPPAS---------THELTIPNDLIGCIIGRQGTKINEIR 270
Query: 429 RSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
+ SGA + I E + I+GT + + AQ LI
Sbjct: 271 QMSGAQIKIANAMEGSSERQITITGTPANISLAQYLI 307
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGW---PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G T +PG P S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 227 LGQTTPAFPGLDAAPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGS 286
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 287 SERQITIT 294
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 151/357 (42%), Gaps = 54/357 (15%)
Query: 118 STEKKWPG-WPGESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTER 175
+TE K PG P ++ R+++ + VGSIIG+KG+ IK+ EE+ ARI I DG + ER
Sbjct: 6 TTENKVPGEAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDG--SSPER 63
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK-VSTKLLVPASQ 232
V I+ E +L+ I + D ++H S V+ +L+VPASQ
Sbjct: 64 IVTITGSTE----------NILKAFNMIGKKFEEDMKAAHVNSSVPVPPVTLRLIVPASQ 113
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
GSLIGK G +K I+E + ++V G + LP +R V V G + + + I
Sbjct: 114 CGSLIGKGGSKIKEIREVTGASIQVAG-DMLPN---STERAVTVSGTPDAISQCVYHICC 169
Query: 293 HLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPR 352
+ + + IP + P P S G P G + +
Sbjct: 170 VMLESPPKGATIP--------------YKPRPASGTSTSG--PVVFAGGQLTKLHQLALQ 213
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
Q P LP + Q +G + S P + T ++ IP
Sbjct: 214 QTPYITPGTTLPAALATQ-------FGVQ----------TASQPGNPSSQTHELTIPNEL 256
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+IG G I+ IR+ SGAT+ I + + V I+GT + AQ LI +
Sbjct: 257 IGCIIGKGGCKINEIRQCSGATIKIAGMQEGSTDRQVTITGTPESISMAQFLINTSL 313
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
PG P + +P + +G IIG+ G I +I + + A IKI G+T+R V I+
Sbjct: 240 PGNPSSQTHELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGMQEGSTDRQVTITGTP 299
Query: 184 EPESSLPPAMDGLLRVHKR 202
E S ++ L + KR
Sbjct: 300 ESISMAQFLINTSLELAKR 318
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 153/366 (41%), Gaps = 68/366 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ E++ ARI I +G ER V I+
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTITGPT-------- 67
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K +
Sbjct: 68 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I + L
Sbjct: 126 RESTGAQVQVAG-DMLPN---STERAVTISGAPEAIIQCVKQI------------CVVLL 169
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
E PP+ P P+ P Q P A + A+L +
Sbjct: 170 E-------------SPPKGATIPYRPKPASTPVIFSGGQVRADPLGAST----ANLSLLL 212
Query: 368 EKQ-------------PHQGISAYGREAPVNVHGSSNAQSTPSM------ITQVTQQMQI 408
+ Q PH +S + A + Q+TP+ T ++ I
Sbjct: 213 QHQPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTI 272
Query: 409 PLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF 468
P +IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 273 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINAR 332
Query: 469 MAEAAA 474
+ AA
Sbjct: 333 FRDVAA 338
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGWPGE---SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G T +PG S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 249 LGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGS 308
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 309 SERQITIT 316
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 154/345 (44%), Gaps = 67/345 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQA--ESYYPPADLPP 365
E Q+ ++ PP+ P PS P Q + A +S++P
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMT---- 210
Query: 366 PMEKQPHQGISAYGREAPVNVHG----SSNAQSTPSMITQVTQQMQIPLSYADAVIGTAG 421
+ G S +P V G ++AQ+T + ++ IP +IG G
Sbjct: 211 ----HGNTGFSGIESSSP-EVKGYWGLDASAQTT-------SHELTIPNDLIGCIIGRQG 258
Query: 422 ASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
A I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 259 AKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 303
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 139/323 (43%), Gaps = 65/323 (20%)
Query: 123 WPGWPGESV-----FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+ G PG R+LV + VG+IIGR+G I++I + TRAR+ + G+ E+A
Sbjct: 176 FSGLPGAGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSLEKA 235
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ K+I++ + ++S+ G+++ K+L + G +
Sbjct: 236 ITIYG--NPENCTNAC--------KKILEVMHQEASNTNK---GEITLKILAHNNLIGRI 282
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + KA +I + LR+
Sbjct: 283 IGKGGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIENMSKAEAMISNKLRQ 340
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + GY + +
Sbjct: 341 S---------YENDLQAMAPQSMMFPGLH----PMAMMSTASMGYNS---------RGPA 378
Query: 357 YYPPADLPPPMEKQ--PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
Y P P + P QG+ +S+AQ T + IP +
Sbjct: 379 LYGTGPAPYPYQSNLTPQQGVL------------TSDAQETTFLY--------IPNNSVG 418
Query: 415 AVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R SGA+V I
Sbjct: 419 AIIGTKGSHIRNIIRFSGASVKI 441
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGPP-GTTERAVMISAKE 183
E+ F + +P VG+IIG KG I+ I+ + A +KI D P TER V I
Sbjct: 406 ETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLESDKPAEQQTERKVTIVG-- 462
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PES L K +G S + +++ ++LVP++Q G +IGK G
Sbjct: 463 SPESQWKAQ---YLIFEKMREEGFVSGTEDV------RLTVEILVPSAQVGRIIGKGGQN 513
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
V+ +Q + ++++ + P A ++ V ++G V A I
Sbjct: 514 VRELQRVTGSVIKLSEQQATPPTA-DEETTVHIIGPFFSVQSAQRRI 559
>gi|330914909|ref|XP_003296833.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
gi|311330863|gb|EFQ95085.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 159/372 (42%), Gaps = 50/372 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R + + +IIG+ GE + +I + A+ + D G ER + +S +
Sbjct: 132 VRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQ--------- 182
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV L+ + PS + K +LL+P GS+IGK G ++ IQEA
Sbjct: 183 -VDAVSKAFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQEA 241
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
SN L A D + +R + V+G A VH A+ + L + L +R
Sbjct: 242 SNA---KLNASDT-LLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQY 297
Query: 302 --------SIIPLFEMHMQ--MPNPQMDHIPPPQSWG---PPQGLPPSGGPGYGHNPQYM 348
+++P M +Q +P P PQ++ PPQ P GG YG +
Sbjct: 298 ATRSGMAANVVP-GGMSVQPYVPQPAGGQYSHPQNFRRQEPPQRTPAHGG--YGAPHMHG 354
Query: 349 PPPRQAESYYP--PADLPPPMEKQPHQGISA---YGREAPVNVHGSSNAQSTPSMITQ-- 401
PP+Q+ +P P P + P+ G +A YG A ++
Sbjct: 355 QPPQQSPYGHPNMPYGAGSP-SRGPYGGPAAPTPYGAHPAAAPVAHGGAAPHAAVGAMPG 413
Query: 402 --VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
+TQQ+ IP A+IG GA I+ IR+ SG+ + I E E V I+GT Q
Sbjct: 414 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQECNQ 473
Query: 460 TAQQLIQNFMAE 471
A ++ + + +
Sbjct: 474 MALYMLYSRLGQ 485
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 143/340 (42%), Gaps = 68/340 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 58 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 107
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 108 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 165
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 166 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICV--------------- 206
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
+ ++ P P+ IP P+ P +GG Y QY P ++
Sbjct: 207 -VMLESP-PKGATIPYRPKPASTPVIF--AGGQAYTIQGQYAIPHPDVSFHFVCLPFSSC 262
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
++ P P + H ++ IP +IG G I+
Sbjct: 263 LDASP-----------PASTH-----------------ELTIPNDLIGCIIGRQGTKINE 294
Query: 427 IRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 295 IRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 334
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP G H + G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 21 SILPLGTLGTFSHHLQTHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 80
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 81 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 127
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 155/358 (43%), Gaps = 78/358 (21%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPS-------GGPGYGHNPQYMPPPRQAESYYPP 360
E Q+ ++ PP+ P PS GG Y QY P +
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSS------------NAQSTPSMITQVTQQMQI 408
A +Q H +S +G V SS +AQ+T + ++ I
Sbjct: 215 A------MQQSHFPMS-HGNTGFSGVESSSPDEKGYWAGLDASAQTT-------SHELTI 260
Query: 409 PLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
P +IG GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 261 PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 318
>gi|154281643|ref|XP_001541634.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411813|gb|EDN07201.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 482
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 147/352 (41%), Gaps = 50/352 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQ-------- 190
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 191 --DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 249 SGA---RLNASD-SCLPLSTERTLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 311 --------------MQMPNPQMDHIPPPQS--WGPPQGL----PP------SGGPG--YG 342
MQ+ + ++P P +G P PP +GG G Y
Sbjct: 305 ATRSGGAAGVVPGGMQV----VPYVPQPAGGQYGHPDTFKRHQPPGNRVVSTGGYGVPYV 360
Query: 343 HNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMI--T 400
H P +Y + P PHQ + YG P VHG +AQ ++
Sbjct: 361 HGQPGQPQMPHQALHYGSSSRPGYSGAGPHQP-APYGAPQPAPVHGGPSAQPAGGVVPGA 419
Query: 401 QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
VTQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+
Sbjct: 420 PVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTIT 471
>gi|310790849|gb|EFQ26382.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 471
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 146/357 (40%), Gaps = 55/357 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + I + + A+ + D G ER + +S
Sbjct: 114 IRAVISSPEAATIIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSG---------- 163
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + I+ L+++ PS K +LL+P GS+IGK G ++ IQEA
Sbjct: 164 VVDAAAKAFGLIIRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEA 223
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A +GS L + L DR P +
Sbjct: 224 SGA---RLNASD-SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAY 279
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY------------MPP-PRQAESY 357
+P P P +GG YG+ Y +P P A+ Y
Sbjct: 280 ATRSGGPAGVVPGGMQVVPYCPQPTTGG-NYGNRENYNRRHDARAQHPGLPAAPYGAQPY 338
Query: 358 YPPADLPPPME-----------------KQPHQGISA---YGREAPVNVHGSSNAQSTPS 397
P A P P QPH G + +G +HG++ A +
Sbjct: 339 PPHAAQPNPAMPIHYGAAQAGGYGAAAPMQPHAGAAVPQPHGAHPAQPMHGAAVAGAP-- 396
Query: 398 MITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
+TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V I+GT
Sbjct: 397 ----LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGT 449
>gi|451997944|gb|EMD90409.1| hypothetical protein COCHEDRAFT_1225891 [Cochliobolus
heterostrophus C5]
Length = 365
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 159/369 (43%), Gaps = 70/369 (18%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET R + G +R + ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTG--------- 96
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
++ G+ + + GL AP+ G GG + T +LL+ +Q G++IG+QG
Sbjct: 97 -SLSGISKAYGLAAKGL---LEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLK 152
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+AS VR++ +++ +R+VEV G +G+ KA+ IG K L+D
Sbjct: 153 IKQIQDASG--VRMVAQKEM--LPQSTERIVEVQGSPAGIEKAVWEIG----KCLIDDHE 204
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQ--GLPPSGGPG-------YGHNPQY--MPPPR 352
+ + NP + + P GP G P+GG G GH + PP
Sbjct: 205 RGYGTV---LYNPAV-RVQPGVGPGPAANGGSAPAGGMGGGRSYNRTGHGADFSDSPPAF 260
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
S A PPP P + Q TQ + IP
Sbjct: 261 SRRSGSDAASRPPP----------------PTHTEDGEEMQ---------TQNISIPSDM 295
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMA 470
+IG G+ IS IR++S A ++I + GE I+G+AS + A L+ +N A
Sbjct: 296 VGCIIGRGGSKISEIRKTSNARISIAKAPHDDTGERMFTITGSASANEKALYLLYENLEA 355
Query: 471 EAAAPSQAQ 479
E SQAQ
Sbjct: 356 EKMRRSQAQ 364
>gi|241956872|ref|XP_002421156.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223644499|emb|CAX41315.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 533
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 157/377 (41%), Gaps = 59/377 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RM P ++ +I+GRKGE I + E+ RI + + G ER V + P ++
Sbjct: 162 LRMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKG---PAENVAR 218
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A + RV L+ S T + + KLL+P G +IGKQG + I+E
Sbjct: 219 AFGLITRV------ILEEPEDEPASITSQQYNLKLLIPHPMIGFIIGKQGLKFREIEE-- 270
Query: 252 NCIVRVLGAED-LPVFALQDDRVVEVVGDASGVHKAMELIGSHL--RKFLVDRSIIPLFE 308
N ++ AE+ LP DRV+ V+G +H A+ I + K ++ ++ + L+
Sbjct: 271 NSAAKLKAAENPLP---YSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKNKVVLYN 327
Query: 309 MHMQMPNPQMD-----HIPPPQSWGPPQG----LPPSGGPGYGHNPQYMPPPRQAESYYP 359
P + PP S+ P G LPP P H+ Q+ P +
Sbjct: 328 PANYQPTDHQNLGGRQRHPPNNSYNNPMGYQAKLPPFSKP--PHHSQHQQSPYNFSMMFQ 385
Query: 360 PADLP----PPMEKQPHQGISAYGREAPVNV---------HGSS---NAQSTPSMIT--- 400
PA P P+ P+ IS G + +NV G++ +TP +
Sbjct: 386 PAVQPQHFGTPVTSNPN-AISPVGMQPSINVPPQNQYTDEFGNTIVGEVITTPPVQAGQD 444
Query: 401 QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE-----------TRGVPGEMTV 449
+ Q + + S +VIG G +I +IR +S T E +G+ +
Sbjct: 445 KYNQDVFVANSSIGSVIGKGGNNIKHIRETSACTYVKIEPDKGQSMMLGGGKGMTNIRKL 504
Query: 450 EISGTASQVQTAQQLIQ 466
++G+ + +QTA LI
Sbjct: 505 TLTGSLNSIQTAIYLIN 521
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
Q + PA +PP + Q ++ PV+ H + P+ I +M P+
Sbjct: 117 QTQETLEPAYVPPESDHADEQNTASSSSSKPVSNHRD---RDDPTFIQL---RMYCPVKE 170
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
A ++G G +I+++R + +T+ E +GVP E V + G A V A LI + E
Sbjct: 171 ASTIVGRKGETINHLREKANVRITVSENLKGVP-ERIVAVKGPAENVARAFGLITRVILE 229
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 154/346 (44%), Gaps = 68/346 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQA--ESYYPPADLPP 365
E Q+ ++ PP+ P PS P Q + A +S++P
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMT---- 210
Query: 366 PMEKQPHQGISAYGREAPVNVHG-----SSNAQSTPSMITQVTQQMQIPLSYADAVIGTA 420
+ G S +P V G ++AQ+T + ++ IP +IG
Sbjct: 211 ----HGNTGFSGIESSSP-EVKGYWAGLDASAQTT-------SHELTIPNDLIGCIIGRQ 258
Query: 421 GASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 259 GAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 304
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 145/343 (42%), Gaps = 68/343 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D +++ S + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I ++ L
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI-----------CVVMLE 168
Query: 308 EMHMQ----MPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
+Q +P+P + + P P Q +P L
Sbjct: 169 AYTIQGQYAIPHPDLTKLHQLAMQQTP-----------------FTPLGQTTPAFPGEKL 211
Query: 364 PPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
P + E N+ G SS ++P T ++ IP +IG G
Sbjct: 212 P------------LHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCIIGRQGT 256
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 257 KINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLI 299
>gi|392558575|gb|EIW51762.1| hypothetical protein TRAVEDRAFT_156921 [Trametes versicolor
FP-101664 SS1]
Length = 378
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 147/356 (41%), Gaps = 75/356 (21%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 65 MRCLIVTQDASIIIGKAGSHVNEIREKSGARVVVSESIPGNPERILNVSGP--------- 115
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G +K IQEA
Sbjct: 116 -LDAVSKAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEA 174
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S R+ +E + +R++ V G A +H A IG+ L E +
Sbjct: 175 SGA--RLNASETM--LPGSTERLLSVSGVADAIHIATYYIGNI------------LIEAN 218
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
+MP +N Y P QA S PP+ P +
Sbjct: 219 ERMPTT--------------------------NNSSYRPSSYQASS-APPSST--PRGRP 249
Query: 371 PHQGIS----AYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
P+ G S YG+ ++ A PS + TQQ+ IP +IG GA I+
Sbjct: 250 PYSGSSYVPGGYGQNPYAPAAPAAPAPGPPSQLQ--TQQIYIPNDLVGCIIGKGGAKINE 307
Query: 427 IRRSSGATVTIQE-------------TRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
IR S + + I E G GE V I+G + +Q A QL+ + +
Sbjct: 308 IRHMSASQIKIMEPGAVGVGLNGAAAPAGSEGERLVVITGQPANIQMAVQLLYSRL 363
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQ 459
VT + IP S +VIG G I I+ +SGA + ET +PG E + +SG A +
Sbjct: 146 VTIKFMIPNSRMGSVIGKGGTKIKEIQEASGARLNASETM-LPGSTERLLSVSGVADAIH 204
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGS-PPSN-----PGHAGHA---GG 510
A I N + EA +M + + Y P + S PPS+ P ++G + GG
Sbjct: 205 IATYYIGNILIEA----NERMPTTNNSSYRPSSYQASSAPPSSTPRGRPPYSGSSYVPGG 260
Query: 511 YG 512
YG
Sbjct: 261 YG 262
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 151/348 (43%), Gaps = 57/348 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I++ L+ D S + + + V+ +++VPASQ GSLIGK G +K I
Sbjct: 64 PTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGTPQSIIECVKQI---------------CV 164
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
M Q P P+ IP P+ G P + +GG Y Q+ P + A P
Sbjct: 165 VMLEQSP-PKGVTIPYRPKPSGSP--VIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 221
Query: 367 MEKQP-HQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
P +QG + A + H +M IP +IG G+ I+
Sbjct: 222 FPIAPNNQGFTGMDASAQTSSH-----------------EMTIPNDLIGCIIGRQGSKIN 264
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
IR+ SGA + I + V I+G+ + + A+ LI ++ A
Sbjct: 265 EIRQMSGAQIKIANPVDGSADRQVTITGSPASISLAEYLINARLSSEA 312
>gi|315055291|ref|XP_003177020.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
gi|311338866|gb|EFQ98068.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
Length = 367
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 154/369 (41%), Gaps = 72/369 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFI-------------KKIVEETRARIKILDGPPGTTERAV 177
R +V +++ G IIG+ G+ + K+V+ R+ + GP T +A
Sbjct: 49 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAY 108
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
I AK E + M G+++ ++ +H S +LL+ +Q G++I
Sbjct: 109 SIVAKSLLEGAPQMGMGGVVQ----------NNGTH---------SVRLLISHNQMGTII 149
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
G+QG +K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K
Sbjct: 150 GRQGLKIKYIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAIWEIG----KC 201
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY 357
L+D Q + + P ++ G P GP G NP Y R
Sbjct: 202 LID---------DWQRGTGTVLYNPAVRA---SVGSGPGQGPVAGSNPSYGGSSRSYNRT 249
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ-----VTQQMQIPLSY 412
AD H G +Y R + N ++T+ TQ + IP
Sbjct: 250 GNGADFSD------HPG--SYNRRG-----NNDNPNRGIPLVTEDGEEVQTQNISIPSDM 296
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMA 470
+IG G IS IRRSSGA ++I + GE I G+A + A L+ +N A
Sbjct: 297 VGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENLEA 356
Query: 471 EAAAPSQAQ 479
E SQ Q
Sbjct: 357 EKMRRSQQQ 365
>gi|242764737|ref|XP_002340835.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218724031|gb|EED23448.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 461
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 151/361 (41%), Gaps = 43/361 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ +Q+ + IG+ GE + KI + + ++ + D G ER + +S +
Sbjct: 106 IRAVISSQEAATCIGKGGENVSKIRQLSGSKCTVSDYSRGAVERILTVSGPQ-------- 157
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 158 --DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEA 215
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A + L + L +R P +
Sbjct: 216 SGA---RLNASDA-CLPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 271
Query: 311 MQMPNPQ-------MDHIP-PPQSWGPPQGLPPSG----------GPG-YGHNPQYMPPP 351
M +P PQ G G P S GPG YG + P
Sbjct: 272 ATRSGGPAGVVPGGMQVVPYVPQPAGGQYGHPDSVRRHYPQNNRPGPGPYGAPYAHGGPA 331
Query: 352 RQAESYYPPADLPPPMEKQPHQGISAYGREAPVNV-----HGSSNAQSTPSMITQ--VTQ 404
QA PP + P+ G + + AP HG+ AQ +++ +TQ
Sbjct: 332 AQAPVAQPPLHYGGGAARAPYAGAGPH-QPAPYGAPHAQPHGA-GAQPLAGVVSSQPITQ 389
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
Q+ IP A+IG G I+ IR SG+ + I E + E V I+GT Q A +
Sbjct: 390 QIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALYM 449
Query: 465 I 465
+
Sbjct: 450 L 450
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 156/350 (44%), Gaps = 61/350 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + ++ P +++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTTAI-- 68
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ I+D L+ D S + S + V+ +++VPASQ GSLIGK G +K I
Sbjct: 69 -----FKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDA--SGVHKAMELIGSHLRKFLVDRSIIP 305
+E++ GA+ V+V GD + +A+ + G+ L + I
Sbjct: 124 REST-------GAQ------------VQVAGDMLPNSTERAITIAGTPLSIIECVKQICV 164
Query: 306 LFEMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
+ ++ P P+ IP P+ G P +GG Y Q+ P + A
Sbjct: 165 VM---LESP-PKGVTIPYRPKPSGSPVTF--AGGQAYAVQGQHAIPQPDLTKLHQLAMQQ 218
Query: 365 PPMEKQPH-QGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGAS 423
P P QG +A G +A + ++ IP +IG GA
Sbjct: 219 SPFPLAPSSQGFTA-GMDATTQTG---------------SHELTIPNDLIGCIIGRQGAK 262
Query: 424 ISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
I+ IR+ SGA + I + V I+G+ + + A+ LI ++ A
Sbjct: 263 INEIRQMSGAQIKIANPVEGSNDRQVTITGSPASISLAEYLINARLSSEA 312
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 157/348 (45%), Gaps = 57/348 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + ++ P +S
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTTS--- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I++ L+ D S++ + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 68 ----IFKAFSMIIEKLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + V G + + ++ I I +
Sbjct: 124 RESAGAQVQVAG-DMLPN---STERAITVAGTPQSIIECVKQI------------CIVML 167
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
E PP+ P PSG P + QA + +P P
Sbjct: 168 E-------------SPPKGVTIPYRPKPSGSP-------VIFAGGQAYAVQGQHAIPQPD 207
Query: 368 EKQPHQGISAYGREAPVNV-HGSSNAQSTPSMITQV-TQQMQIPLSYADAVIGTAGASIS 425
+ HQ +++P + H + Q+ Q + ++ IP +IG GA I+
Sbjct: 208 LTKLHQ---LAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKIN 264
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
IR+ SGA + I + V I+G+ + + A+ LI ++ A
Sbjct: 265 EIRQMSGAQIKIANPVEGSTDRQVTITGSHASISLAEYLINARLSSEA 312
>gi|68475799|ref|XP_718106.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|68475932|ref|XP_718039.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439785|gb|EAK99099.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439861|gb|EAK99174.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|238882982|gb|EEQ46620.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 529
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 152/375 (40%), Gaps = 59/375 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RM P ++ +I+GRKGE I + E+ RI + + G ER V + P ++
Sbjct: 162 LRMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKG---PAENVAR 218
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A + RV L+ S + + KLL+P G +IGKQG + I+E
Sbjct: 219 AFGLITRV------ILEEPEDEPASINSQQYNLKLLIPHPMIGFIIGKQGLKFREIEE-- 270
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL--RKFLVDRSIIPLFEM 309
N ++ AE+ DRV+ V+G +H A+ I + K ++ + + L+
Sbjct: 271 NSAAKLKAAEN--ALPYSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKHKVVLYNP 328
Query: 310 HMQMPNPQ----MDHIPPPQSWGPPQG----LPPSGGPGYGHNPQYMPPPRQAESYYPPA 361
P Q PP S+ P G LPP P PQ+ P + PA
Sbjct: 329 ANYQPTDQSLGGRQRQPPSNSYNNPMGYQAKLPPFSKP-----PQHQQSPYNFSMMFQPA 383
Query: 362 DLP----PPMEKQPHQGISAYGREAPVNV---------HGSS---NAQSTPSMIT---QV 402
P P+ P+ +S G + VN+ G++ +TP + +
Sbjct: 384 VQPQHFGSPVTSNPN-AVSPVGMQPSVNIPPQNQFTDEFGNTIVGEVITTPPIQAGQDKY 442
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE-----------TRGVPGEMTVEI 451
Q + + S +VIG G +I +IR +S T E +G+ + +
Sbjct: 443 NQDVFVANSSIGSVIGKRGNNIKHIRETSACTYVKIEPDKGQSMMLGGGKGMTNIRKLTL 502
Query: 452 SGTASQVQTAQQLIQ 466
+GT + +QTA LI
Sbjct: 503 TGTLNSIQTAIYLIN 517
>gi|321468687|gb|EFX79671.1| hypothetical protein DAPPUDRAFT_225024 [Daphnia pulex]
Length = 573
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 29/223 (13%)
Query: 85 EDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGE-SVF-RMLVPAQKVG 142
ED + + +D PE S+ + + + +L +++K + G+ S++ ++LVP+ G
Sbjct: 13 EDSIRSPKFDDDDSPEHSERKRPLDGDSDL----SDRKKSHFTGDGSIYLKVLVPSVAAG 68
Query: 143 SIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESSLPPAMDGLLRV 199
+IIG+ GE I ++ +E ARIK+ D PGTTER +I E M L +
Sbjct: 69 AIIGKGGETIAQVQKEVNARIKMSKANDFYPGTTERVCLIKGTTE------SVMSMLTFI 122
Query: 200 HKRIVD--------GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++I D +D D S P+ +V K+LVP S AG +IGK G +K I+E S
Sbjct: 123 CEKIRDKPDPNAKPAMDFD-SKTPAERDKQV--KILVPNSTAGMIIGKGGSFIKQIKEES 179
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+++ ++ ALQ +R + V+GD+ KA +I S +
Sbjct: 180 GAYIQI--SQKAKDQALQ-ERCITVIGDSDCNRKACCMILSKI 219
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 200 HKRIVDGLDSDSSHAPSG--TG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVR 256
KR +DG DSD S TG G + K+LVP+ AG++IGK G T+ +Q+ N ++
Sbjct: 32 RKRPLDG-DSDLSDRKKSHFTGDGSIYLKVLVPSVAAGAIIGKGGETIAQVQKEVNARIK 90
Query: 257 VLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+ A D + +RV + G V + I +R
Sbjct: 91 MSKANDF--YPGTTERVCLIKGTTESVMSMLTFICEKIR 127
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD-GPPGTTERAVMISAKEEP 185
P E R+L ++ +G +IGR G ++++ ++T ARI + + + ER ++IS+KE P
Sbjct: 64 PEEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISSKEIP 123
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
+ P ++ L+ +H ++ S+ S + K+ T+L+VP+ + G ++G+ G +
Sbjct: 124 ADPVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVTRLVVPSKKVGCILGEGGKVIT 183
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
++ +RV D P + ++ +V+V G +A+ I S LR ++ I
Sbjct: 184 EMRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAREALTEIASRLRDRILRDGI 241
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 381 EAPVNVHGSSNAQSTPSMI--TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQ 438
EA +HG + Q + + + +++IP S ++V+G G +++ IR+ SGA + +
Sbjct: 469 EAAGQMHGREDYQRAADVTGYSSSSVELRIPNSSLESVVGAGGVNLAEIRQISGARMKLL 528
Query: 439 ETRGVPGEMTVEISGTASQVQTAQQLIQNFM---AEAAAPSQA 478
E R E +EI G A QV+ AQ L+Q F+ +++A PSQ+
Sbjct: 529 EARPGSSESIMEIQGMAHQVRVAQSLLQGFIGANSQSAQPSQS 571
>gi|358055492|dbj|GAA98612.1| hypothetical protein E5Q_05299 [Mixia osmundae IAM 14324]
Length = 549
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R L+ Q IIG+ G+ IK+I E+ ++ + + P ER + +S
Sbjct: 189 TLRALIVTQDASIIIGKGGQSIKEIREKAGVKVLVSESIPNNPERILNVSG--------- 239
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQE 249
+DG+ + IV ++ + PS G + V+ + +VP + GS+IGKQG +K IQ+
Sbjct: 240 -LLDGVSKAFGLIVRRINDEPFDVPSVPGSRAVTIRFIVPNHRMGSIIGKQGAKIKEIQD 298
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI--IPL- 306
AS R+ E + +R++ + G A +H A+ G+ L + DR++ P
Sbjct: 299 ASGA--RLQATESM--LPGSTERILSISGVADAIHIAVYYTGAILAEH-SDRAVNNTPYR 353
Query: 307 ----------------------------------FEMHMQMPNPQMDHIPPPQSWGPPQG 332
+ + M NP H P GPP
Sbjct: 354 PGLPPTSYGPPPPRPGSGPSAGGYYPPAPPHHDPYRVAAPMVNPTGYHDPYRGMGGPPAA 413
Query: 333 LPPSGGPGYGHNPQ--YMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSS 390
+ P P +G PQ + PP Q PP + Q +G PV
Sbjct: 414 MAP---PQHGQAPQQHFAAPPVQGM---------PPAQAQATTSAMPFG-PPPV------ 454
Query: 391 NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETR--GV--PGE 446
+T + TQQ+ IP +IG G I+ +R +SGA + I E G+ GE
Sbjct: 455 ---ATGPVGPNQTQQVYIPNELVGPIIGKGGLKINELRNNSGAHIKIMEPSEGGLNPNGE 511
Query: 447 MTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPY 491
V +SG + +Q A Q++ + + A +QGY+ Y
Sbjct: 512 RLVNVSGQPANIQMAVQMLYQRLEQEKA-------NKMNQGYSGY 549
>gi|258574629|ref|XP_002541496.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901762|gb|EEP76163.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 491
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 153/370 (41%), Gaps = 47/370 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 134 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTVSGPQ-------- 185
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQE
Sbjct: 186 --DAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEH 243
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + + L + L +R P +
Sbjct: 244 SGA---RLNASD-SCLPLSTERSLVILGVADAVHIATYYVAATLVEQLTERFGGPAASAY 299
Query: 311 MQMPNPQMDHIPPPQSWGP--PQGLPPSGGPGYGH---NPQYMPPPRQAES------YYP 359
IP P PQ P+GG YGH ++ P +A S Y
Sbjct: 300 ATRSGGPAGVIPGGMQVVPYVPQ---PAGGQ-YGHPDSFKRHHPQANRAMSTGYGMPYMQ 355
Query: 360 PADLPPPMEKQ--------PHQGISA--------YGREAPVNVHGS-SNAQSTPSMITQV 402
P P Q P QG + YG P + HG+ + P +
Sbjct: 356 GGPGPSPHAMQQPIHYNASPRQGYTGAGPHQPAPYGAPQPPHSHGTPAQPMGAPVAGGPL 415
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
TQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q A
Sbjct: 416 TQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQMAL 475
Query: 463 QLIQNFMAEA 472
++ + + E+
Sbjct: 476 YMLYSRLGES 485
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 158/385 (41%), Gaps = 53/385 (13%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ P +S+
Sbjct: 21 TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---PTNSIF 75
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKV-----STKLLVPASQAGSLIGKQGGTVK 245
A + + + +G GG V + +L+VPASQ GSLIGK G +K
Sbjct: 76 KAFTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIGKGGSKIK 135
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIP 305
I+E + ++V +E LP +R V + G + + + + I + + + IP
Sbjct: 136 EIREVTGASIQV-ASEMLPN---STERAVTISGTSEAITQCIYHICCVMLESPPKGATIP 191
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPP-----------PRQA 354
+ P PQ GP + +GG + Y P P
Sbjct: 192 --------------YRPKPQVGGP---VILAGGQAFTIQGNYAVPAHSDMGKLGSSPLAG 234
Query: 355 ESYYPPADLPPPMEK---QPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
+ L P P + G + N NA T +M +P
Sbjct: 235 LAALGLGGLAAPANTGGLNPAALAALAGSQLRTN-----NANRQQPAANNQTHEMTVPNE 289
Query: 412 YADAVIGTAGASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQNF 468
+IG G I+ IR+ SGA + I +E G P + T+ I+G V AQ LI
Sbjct: 290 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITGNPDSVALAQYLINMS 349
Query: 469 MAEAAAPSQAQMGASADQGYNPYAS 493
+ A +AQ + G P A+
Sbjct: 350 VELQKANLEAQNTQNPGSGTTPGAT 374
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 152/346 (43%), Gaps = 53/346 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + ++ P +++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTTAI-- 68
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ I++ L+ D S + + + V+ +++VPASQ GSLIGK G +K I
Sbjct: 69 -----FKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGTPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
E PP+ P PSG P Q Q + P DL
Sbjct: 168 E-------------SPPKGVTIPYRPKPSGSPVIFAGGQAYAV--QGQHAIPQPDLTKLH 212
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYI 427
+ Q G P G +A + S + +M IP +IG G+ I+ I
Sbjct: 213 QLAMQQSPFPMGPNNP-GFQGGMDASAQTS-----SHEMTIPNDLIGCIIGRQGSKINEI 266
Query: 428 RRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
R+ SGA + I + V I+G+A+ + A+ LI ++ A
Sbjct: 267 RQMSGAQIKIANPVEGSADRQVTITGSAASISLAEYLINARLSSEA 312
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 157/350 (44%), Gaps = 61/350 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + ++ P +++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTTAI-- 68
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ I+D L+ D S + S + V+ +++VPASQ GSLIGK G +K I
Sbjct: 69 -----FKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDA--SGVHKAMELIGSHLRKFLVDRSIIP 305
+E++ GA+ V+V GD + +A+ + G+ L + I
Sbjct: 124 REST-------GAQ------------VQVAGDMLPNSTERAITIAGTPLSIIECVKQICV 164
Query: 306 LFEMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
+ ++ P P+ IP P+ G P + +GG Y Q+ P + A
Sbjct: 165 VM---LESP-PKGVTIPYRPKPSGSP--VIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQ 218
Query: 365 PPMEKQPH-QGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGAS 423
P P QG +A G +A + ++ IP +IG GA
Sbjct: 219 SPFPLAPSSQGFTA-GMDATTQTG---------------SHELTIPNDLIGCIIGRQGAK 262
Query: 424 ISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
I+ IR+ SGA + I + V I+G+ + + A+ LI ++ A
Sbjct: 263 INEIRQMSGAQIKIANPVEGSNDRQVTITGSPASISLAEYLINARLSSEA 312
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 21/142 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA----KEEPES 187
+R+L P + +GS+IG+ G+ I I +ETRA++K++D PG +R + I KE+ E
Sbjct: 41 YRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGPNDRVITIYCYVKKKEDVEL 100
Query: 188 S--------LPPAMDGLLRVHKRIVDG----LDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
A D LLRVH I + LDSD K ++LVP+SQ+ +
Sbjct: 101 DDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKD-----KEECRILVPSSQSAN 155
Query: 236 LIGKQGGTVKSIQEASNCIVRV 257
+IGK G T+K ++ + ++V
Sbjct: 156 IIGKAGTTIKKLRSKTRATIKV 177
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL--DGPPGTTERAV-MISAKEEPESS 188
R+LVP+ + +IIG+ G IKK+ +TRA IK+ D T A+ + P+
Sbjct: 144 CRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPKDASDPTHSCAMDFDNFIMSPDDL 203
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L + +I D D D+ VS +LLVP G +IGK G + I+
Sbjct: 204 KSMAVEAILLLQGKINDE-DDDT----------VSIRLLVPCKVIGCIIGKSGSIINEIR 252
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+ +R+ + P A D +VEV+G+ V A+ I LR
Sbjct: 253 RRTKADIRISKGQK-PKCADSSDELVEVLGEVGSVRDALVQIVLRLR 298
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
T +M +P + V+G GA+I+ IR+ SGA + I + + G+ ISGT Q + A+
Sbjct: 393 TLEMLVPANAVGKVLGKGGANIANIRKISGAMIEISDAKSARGDRIAHISGTPEQKRAAE 452
Query: 463 QLIQNFM 469
LIQ F+
Sbjct: 453 NLIQAFI 459
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 152/348 (43%), Gaps = 58/348 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I++ L+ D S + + + V+ +++VPASQ GSLIGK G +K I
Sbjct: 64 PTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGTPQSIIECVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
+ ++ P P+ IP P+ G P + +GG Y Q+ P + A P
Sbjct: 164 VVMLESP-PKGVTIPYRPKPSGSP--VIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 367 MEKQP-HQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
P +QG + A + H +M IP +IG GA I+
Sbjct: 221 FPIAPSNQGFTGIDASAQTSSH-----------------EMTIPNDLIGCIIGRQGAKIN 263
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
IR+ SGA + I + V I+G+ + + A+ LI ++ A
Sbjct: 264 EIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLINARLSSEA 311
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 151/351 (43%), Gaps = 64/351 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPS-------GGPGYGHNPQYMPPPRQAESYYPP 360
E Q+ ++ PP+ P PS GG Y QY P +
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 361 A----DLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADA 415
A P GI + E G ++AQ+T + ++ IP
Sbjct: 215 AMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTT-------SHELTIPNDLIGC 267
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+IG GA I+ IR+ SGA + + V I+G+A+ + AQ LI
Sbjct: 268 IIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLIN 318
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 152/348 (43%), Gaps = 58/348 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I++ L+ D S + + + V+ +++VPASQ GSLIGK G +K I
Sbjct: 64 PTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGTPQSIIECVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
+ ++ P P+ IP P+ G P + +GG Y Q+ P + A P
Sbjct: 164 VVMLESP-PKGVTIPYRPKPSGSP--VIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 367 MEKQP-HQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
P +QG + A + H +M IP +IG GA I+
Sbjct: 221 FPIAPSNQGFTGMDASAQTSSH-----------------EMTIPNDLIGCIIGRQGAKIN 263
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
IR+ SGA + I + V I+G+ + + A+ LI ++ A
Sbjct: 264 EIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLINARLSSEA 311
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 154/367 (41%), Gaps = 84/367 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ +++
Sbjct: 19 IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGS---TNAIFK 73
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A + + + D ++S S P ++ +L+VPASQ GSLIGK G +K I+E +
Sbjct: 74 AFTLICKKFEEFQD-INSGGSGVPR---PPITLRLIVPASQCGSLIGKGGSKIKEIREVT 129
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
++V +E LP +R V + G + + + I + + + + IP
Sbjct: 130 GASIQV-ASEMLPN---STERAVTISGTGEAITQCIYHICTVMLESPPKGATIP------ 179
Query: 312 QMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQP 371
+ P PQ GP + +GG Y Y P
Sbjct: 180 --------YRPKPQVGGP---VILAGGQAYTIQGNYAVP--------------------A 208
Query: 372 HQGISAYGRE-------------APVNVHG---------------SSNAQSTPSMITQVT 403
H +SA G+ AP N G +SN+++ + Q T
Sbjct: 209 HTDMSALGKSPLAGLAALGLGGLAPTNTGGLNPAALAALAGSQLRTSNSRNQQNS-NQQT 267
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQET----RGVPGEMTVEISGTASQVQ 459
+M +P +IG G I+ IR+ SGA + I GV + T+ ISG V
Sbjct: 268 HEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVT-DRTITISGNPDAVA 326
Query: 460 TAQQLIQ 466
AQ LI
Sbjct: 327 LAQYLIN 333
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 153/367 (41%), Gaps = 78/367 (21%)
Query: 123 WPGWPGESV-----FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+ G PG+S R+LV + VG+IIGR+G I++I ++TRAR+ + G+ E+A
Sbjct: 118 FGGLPGQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKA 177
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQ 232
+ I PE+ KRI++ + ++++ G K + K+L +
Sbjct: 178 ITIYG--NPENCTNAC--------KRILEVMQQEANNTNKGYAKKYYYEICLKILAHNNL 227
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
G +IGK G T+K I + ++ + V D+ F L +R++ V G + +A I +
Sbjct: 228 IGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNL--ERIITVKGAIDNMSRAEAQISA 285
Query: 293 HLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPR 352
LR+ +E +Q PQ P P + + G GYG Y
Sbjct: 286 KLRQ---------SYENDLQAMAPQTMMFPGLH----PMAMMATAGIGYGSRGLYTG--- 329
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
+ P+ G+ G G ++Q T + IP +
Sbjct: 330 ----------------QAPYPGMYPAGAA-----QGGGDSQETT--------YLYIPNNA 360
Query: 413 ADAVIGTAGASISYIRRSSGATVTI--------QETRGVPGEMTVEISGTASQVQTAQQL 464
A+IGT G+ I I R SGA+V I QET+ E V I G+ AQ L
Sbjct: 361 VGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQ---NERRVTIVGSPEAQWKAQYL 417
Query: 465 IQNFMAE 471
I M E
Sbjct: 418 IFEKMRE 424
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESSLP 190
+ +P VG+IIG KG I+ I+ + A +KI + P T+ ++ PE+
Sbjct: 354 LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWK 413
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
L K +G + S +++ +++VP+SQ G +IGK G V+ +Q
Sbjct: 414 AQY---LIFEKMREEGFVAGSDDV------RLTVEIMVPSSQVGRIIGKGGQNVRELQRV 464
Query: 251 SNCIVRV 257
+ ++++
Sbjct: 465 TGSVIKL 471
>gi|451855342|gb|EMD68634.1| hypothetical protein COCSADRAFT_350318 [Cochliobolus sativus
ND90Pr]
Length = 488
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 156/369 (42%), Gaps = 49/369 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R + + +IIG+ GE + +I + A+ + D G ER + +S +
Sbjct: 131 VRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQ--------- 181
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV L+ + PS + K +LL+P GS+IGK G ++ IQEA
Sbjct: 182 -VDAVSKAFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEA 240
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
SN L A D + +R + V+G A VH A+ + L + L +R
Sbjct: 241 SNA---KLNASDT-LLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQY 296
Query: 302 --------SIIPLFEMHMQ--MPNPQMDHIPPPQSWG---PPQGLPPSGGPGYGHNPQYM 348
+++P M +Q +P P PQ++ P Q P GG YG +
Sbjct: 297 ATRSGMAANVVP-GGMSVQPYVPQPAGGQYSHPQNFRRQEPAQRTPAHGG--YGAPHMHG 353
Query: 349 PPPRQAESYYP--PADLPPPMEKQPHQGISA---YGREAPVNVHGSSNAQSTPSMITQ-- 401
PP+Q+ +P P P + P+ G +A YG A P
Sbjct: 354 QPPQQSPYGHPNMPYGAASP-SRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGAIPGQ 412
Query: 402 -VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQT 460
+TQQ+ IP A+IG GA I+ IR+ SG+ + I E E V I+GT Q
Sbjct: 413 PLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQECNQM 472
Query: 461 AQQLIQNFM 469
A ++ + +
Sbjct: 473 ALYMLYSRL 481
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 161/354 (45%), Gaps = 60/354 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I++ L+ D S + + + V+ +++VPASQ GSLIGK G +K I
Sbjct: 64 PTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGTPQSIIECVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
+ ++ P P+ IP P+ G P + +GG Y Q+ P + S A + P
Sbjct: 164 VVMLESP-PKGVTIPYRPKPSGSP--VIFAGGQAYAVQGQHAIPQPDSSS----ASISPQ 216
Query: 367 MEKQPHQGISAYGREAPV-------NVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGT 419
+ K HQ +++P G +A + S + +M IP +IG
Sbjct: 217 LTKL-HQ---LAMQQSPFPMGPNNPGFQGGMDASAQTS-----SHEMTIPNDLIGCIIGR 267
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
G+ I+ IR+ SGA + I + V I+G+A+ + A+ LI ++ A
Sbjct: 268 QGSKINEIRQMSGAQIKIANPVEGSADRQVTITGSAASISLAEYLINARLSSEA 321
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESS 188
E FR+L GSIIG+KG ++ + ET A I + ER V ISA E ES
Sbjct: 284 EVSFRLLCSNGAAGSIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVTISALENLESW 343
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGT--GGKVSTKLLVPASQAGSLIGKQG-GTVK 245
PA + + V R V+ D + H PSG G V+ +LLV + LI K G G +
Sbjct: 344 HSPAQNAAILVFARSVEH-DIEKGH-PSGLIEGATVTARLLVASDAVCCLIEKGGTGNID 401
Query: 246 S-IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
S + E S +R+L E + A +DD V+E+ G+ V A+ ++ LR
Sbjct: 402 SEMIEVSGADIRILDGEQIMACASEDDVVIEITGEYKNVQNALFMVTGKLR 452
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 141/362 (38%), Gaps = 84/362 (23%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI------- 179
PG+ FR++ A +G +IGR G I +I +T + + G+ R + I
Sbjct: 22 PGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPASPG 81
Query: 180 --------------SAKEEPESSLPPAMDGLLRVHKRI--VD-------GLDSDSSHAPS 216
A+EE + + A + ++RV +R+ VD G+D++S+++
Sbjct: 82 KRITLNSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMWEVDGQRERRGGVDNNSNNSGL 141
Query: 217 GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
G G LL +Q G+++GK G V ++ S +R L P A +DD+++++
Sbjct: 142 GEG---YCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFLPP---PHCASKDDQLIQI 195
Query: 277 VGDASGVHKAMELIGSHLRK---FLVDRSII--PLFEM-HMQMPNPQMDHIPPPQSWGPP 330
G V KA+ + L + D +++ PL H+ +P + P S PP
Sbjct: 196 TGSILAVKKALVAVTDCLHDCPPYEKDPTLLMRPLERASHLASSDPHAEFFPHLSSLLPP 255
Query: 331 QGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSS 390
SG G H L + P+Q A E + S+
Sbjct: 256 L----SGNSGTSH------------------PLSSDAGEDPNQDAEAVRHEVSFRLLCSN 293
Query: 391 NAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVE 450
A A ++IG G + ++ +GA++ + GE V
Sbjct: 294 GA--------------------AGSIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVT 333
Query: 451 IS 452
IS
Sbjct: 334 IS 335
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 362 DLPPPMEKQPHQGI---SAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
D P P P Q +GR A + S + + +P ++ + + + +P +V G
Sbjct: 578 DFPSPALHMPQQTAGRGKTFGRGAELE---SYSRKRSPIVVNTIIE-LVVPEDTIGSVYG 633
Query: 419 TAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
G++++ +R+ SGA V ++E + G G + V ISGT Q AQ L+Q F+
Sbjct: 634 EDGSNLARLRQISGAKVEVREPSSGKSGRIVV-ISGTPDQTNAAQSLLQAFI 684
>gi|189188542|ref|XP_001930610.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972216|gb|EDU39715.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 364
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 156/369 (42%), Gaps = 71/369 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET R + G +R + ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTG--------- 96
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
++ G+ + + GL AP+ G GG + T +LL+ +Q G++IG+QG
Sbjct: 97 -SLSGISKAYGLAAKGL---LEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLK 152
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD--- 300
+K IQ+AS VR++ +++ +R+VEV G +G+ KA+ IG K L+D
Sbjct: 153 IKQIQDASG--VRMVAQKEM--LPQSTERIVEVQGSPAGIEKAVWEIG----KCLIDDHE 204
Query: 301 RSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG------YGHNPQY--MPPPR 352
R + + P P P S G G PSG G GH + PP
Sbjct: 205 RGYGTVLYNPVVRVQPGAG--PGPLSNG---GSAPSGSMGGRSYNRTGHGADFSDSPPAF 259
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
S A PPP P + Q TQ + IP
Sbjct: 260 SRRSGSDAASRPPP----------------PTHTEDGEEMQ---------TQNISIPSDM 294
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMA 470
+IG G IS IR++S A ++I + GE I+G+AS + A L+ +N A
Sbjct: 295 VGCIIGRGGTKISEIRKTSNARISIAKAPHDDTGERMFTITGSASANEKALYLLYENLEA 354
Query: 471 EAAAPSQAQ 479
E SQAQ
Sbjct: 355 EKMRRSQAQ 363
>gi|365766932|gb|EHN08421.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 413
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 141/364 (38%), Gaps = 54/364 (14%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P + RML + I+G KG I +I ET ARI I + G ER V +
Sbjct: 64 PSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRG----- 118
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + + IV L + + +G ++S LL+P G +IGK+G ++
Sbjct: 119 -----TCDDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL-------V 299
I++ S ++ + + L +DR++ + G +H A I L F V
Sbjct: 174 IEDLS--AAKLFASPNQ--LLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNV 229
Query: 300 DRSIIPLFEMHMQMPNPQMDHIPPPQ----------------SWGPPQGLPPSGGPGYGH 343
RSI + Q + +DH P S+ P + LP S
Sbjct: 230 KRSI---YYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTXLSMA 286
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT 403
PQY + + P + P + + PV S A ++ V
Sbjct: 287 TPQYTTASVANATAFQPNFVIP----------NVTVLDGPV----ISPAPGNHLLMNFVQ 332
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
Q++ I + VIG G I+ ++ S+G ++ IQ+ E + I GT Q A
Sbjct: 333 QEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGTFMASQAAIM 392
Query: 464 LIQN 467
LI N
Sbjct: 393 LISN 396
>gi|449304748|gb|EMD00755.1| hypothetical protein BAUCODRAFT_60994 [Baudoinia compniacensis UAMH
10762]
Length = 333
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 154/357 (43%), Gaps = 72/357 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R +V +++ G IIG+ G+ + ++ ++T R + PG +R + ++
Sbjct: 20 LRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSKVVPGVHDRVLTVTGP--------- 70
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGTV 244
+ G+ + + DGL AP G GG V+ +LL+ +Q G++IG+QG +
Sbjct: 71 -LTGISEAYGLVADGL---VKGAPQMGMGGVVANPNTHPIRLLISHNQMGTIIGRQGLKI 126
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--- 301
K IQ+AS VR++ +++ +R+VE+ G GV KA+ IG K L+D
Sbjct: 127 KQIQDASG--VRMVAQKEM--LPQSTERIVEIQGTPDGVQKAVWEIG----KCLIDDQER 178
Query: 302 ---SII--PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+++ P + P P M+ +G P+G +G G + P Q S
Sbjct: 179 GYGTVLYSPAVRVQGAAPTPAMNGT----GYGAPRGYNRTGN---GADFTGSGAPYQRRS 231
Query: 357 YYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416
P PPP V + Q TQ + IP +
Sbjct: 232 TGPSDTGPPPA------------------VEDGEDIQ---------TQNISIPADMVGCI 264
Query: 417 IGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAE 471
IG G+ IS IR+SSGA ++I + GE I+G + + A L+ +N AE
Sbjct: 265 IGRGGSKISEIRKSSGARISIAKAPHDDTGERMFTITGGQTANEKALYLLYENLEAE 321
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 149/343 (43%), Gaps = 34/343 (9%)
Query: 146 GRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVD 205
G+KGE +KK+ EE+ ARI I +G ER + ++ + + + I+D
Sbjct: 22 GKKGESVKKMREESGARINISEG--NCPERIITLAGPT----------NAIFKAFAMIID 69
Query: 206 GLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE 261
L+ D SS S K V+ +L+VPASQ GSLIGK G +K I+E++ V+V G +
Sbjct: 70 KLEEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG-D 128
Query: 262 DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHI 321
LP +R + + G + + ++ I + + IP P P +
Sbjct: 129 MLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY------RPKPSSSPV 179
Query: 322 PPP-----QSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGIS 376
S G P P NP PP +A + +P P + HQ ++
Sbjct: 180 IFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ-LA 238
Query: 377 AYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAGASISYIRRSSGATV 435
P+ HG++ + Q T ++ IP +IG GA I+ IR+ SGA +
Sbjct: 239 MQQSHFPMT-HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 297
Query: 436 TIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQA 478
I + V I+G+A+ + AQ LI + A SQA
Sbjct: 298 KIANPVEGSTDRQVTITGSAASISLAQYLINVSLENAKPSSQA 340
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTTERAVMIS 180
R++VPA + GS+IG+ G IK+I E T A++++ D P +TERA+ I+
Sbjct: 92 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 141
>gi|296825084|ref|XP_002850758.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
gi|238838312|gb|EEQ27974.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
Length = 367
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 153/369 (41%), Gaps = 72/369 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFI-------------KKIVEETRARIKILDGPPGTTERAV 177
R +V +++ G IIG+ G+ + K+V+ R+ + GP T +A
Sbjct: 49 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAY 108
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
I AK E + M G+++ ++ +H S +LL+ +Q G++I
Sbjct: 109 SIVAKSLLEGAPQMGMGGVVQ----------NNGTH---------SVRLLISHNQMGTII 149
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
G+QG +K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K
Sbjct: 150 GRQGLKIKYIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAIWEIG----KC 201
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY 357
L+D Q + + P ++ G P G NP Y R
Sbjct: 202 LID---------DWQRGTGTVLYNPAVRA---SVGSGPGQASAAGSNPSYGGNSRSYNRT 249
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ-----VTQQMQIPLSY 412
AD H G +YGR + N ++T+ TQ + IP
Sbjct: 250 GNGADFSD------HPG--SYGRRG-----NNDNPNRGIPLVTEDGEEVQTQNISIPSDM 296
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMA 470
+IG G IS IRRSSGA ++I + GE I G+A + A L+ +N A
Sbjct: 297 VGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENLEA 356
Query: 471 EAAAPSQAQ 479
E SQ Q
Sbjct: 357 EKMRRSQQQ 365
>gi|402083824|gb|EJT78842.1| hypothetical protein GGTG_03937 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 373
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 61/366 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET R + G +R + I+
Sbjct: 47 TVRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVVQGVHDRVLTITG--------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
D + + + + L AP+ G GG V + KLL+ +Q G++IG++G
Sbjct: 98 -GCDAISKAYAIVARAL---LEGAPTLGMGGVVQSNGTHPIKLLISHNQMGTIIGREGLK 153
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+ S VR++ +D+ ++RVVEV G G+ +A+ + K L+D
Sbjct: 154 IKHIQDVSG--VRMVAQKDM--LPQSNERVVEVQGTPEGIQRAVW----EICKCLID--- 202
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--SGGPGY---GHNPQYMPPPRQAESY- 357
Q + + P ++ P G PP +GGPGY G Y PR +
Sbjct: 203 ------DWQRATGTVLYNPAVRT--QPGGAPPLTTGGPGYNSTGARGDYGSSPRVTRTGN 254
Query: 358 ---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
+ P ++ A R P + Q TQ + IP +
Sbjct: 255 GADFSNGSTPRLYNRRSDS--DAANRGPPTHDENGEEIQ---------TQNISIPANMVG 303
Query: 415 AVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEA 472
+IG AG+ IS IR++SGA ++I + GE I G+A ++A L+ +N AE
Sbjct: 304 CIIGRAGSKISEIRKASGARISIAKAPHDETGERMFTIMGSAKANESALFLLYENLEAEK 363
Query: 473 AAPSQA 478
SQA
Sbjct: 364 IRRSQA 369
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 149/340 (43%), Gaps = 58/340 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I++ L+ D S + + + V+ +++VPASQ GSLIGK G +K I
Sbjct: 64 PTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGTPQSIIECVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
+ ++ P P+ IP P+ G P + +GG Y Q+ P + A P
Sbjct: 164 VVMLESP-PKGVTIPYRPKPSGSP--VIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 367 MEKQP-HQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
P +QG + A + H +M IP +IG GA I+
Sbjct: 221 FPIAPSNQGFTGIDASAQTSSH-----------------EMTIPNDLIGCIIGRQGAKIN 263
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
IR+ SGA + I + V I+G+ + + A+ LI
Sbjct: 264 EIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLI 303
>gi|358400710|gb|EHK50036.1| hypothetical protein TRIATDRAFT_51252 [Trichoderma atroviride IMI
206040]
Length = 477
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 154/365 (42%), Gaps = 40/365 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + I + + A+ + D G ER + +S
Sbjct: 120 IRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSG---------- 169
Query: 192 AMDGLLRVHKRIVDGLDSD-SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ S A + + +LL+P GS+IGK G ++ IQEA
Sbjct: 170 IVDAVAKAFGLIIRTLNNEPLSEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEA 229
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D + +R + V+G A VH A +GS L + L +R P +
Sbjct: 230 SGA---RLNASD-SCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPGASAY 285
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN--------PQYMPPPRQAES--YYPP 360
+ IP P P SG G N P +MPP + + P
Sbjct: 286 ATRSGAPVGSIPGGMQVVPYSPQPASGHYGRAENYGRHQERRPHHMPPAPYPQPYAHGAP 345
Query: 361 ADLPP-PMEKQPHQGISAYGREAPV-----------NVHGSSNAQSTPSMITQ--VTQQM 406
P PM+ Q +AYG AP HG+ Q + + +TQQ+
Sbjct: 346 HGAPAIPMQYGAGQ-PAAYGAAAPHVQPHMAPHTGPQAHGAPQGQPMHAGMPGGPITQQI 404
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP A+IG G I+ IR+ SG+ + I E + E V I+GT + A ++
Sbjct: 405 YIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTEECNRMALYMLY 464
Query: 467 NFMAE 471
+ + E
Sbjct: 465 SRLGE 469
>gi|405976740|gb|EKC41236.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Crassostrea
gigas]
Length = 416
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 126/307 (41%), Gaps = 65/307 (21%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPPGTTERAVMISAKEEPESSLPP 191
+LV ++ VG+IIG++G+ I I E+RAR+ I DG T +++ K PE+
Sbjct: 12 ILVGSEYVGAIIGKQGQTIHNITSESRARVDIHRRDGLSTDT----LVTIKGSPENCSKA 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + +IV+ S A S G+ K++ P S G +IGKQG +KS E +
Sbjct: 68 CKEIM-----KIVE------SEAQSLNKGEPPLKIICPNSLCGRIIGKQGNVIKSFMEQT 116
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
+ V A D+ F + DRV+ + G KA L+ +RK FE
Sbjct: 117 GTHIVVSSATDMNNFFV--DRVITITGSPENTSKAEALVSEKMRK---------CFEQDA 165
Query: 312 QMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQP 371
Q N QM G P + P Y P Q + +Y
Sbjct: 166 QNYNTQMGMF-----GGMPPMPNMMPPYNFQRGPPYPPYQMQGDGFY------------- 207
Query: 372 HQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSS 431
YG+ P P +VT + IP S A IG+ G++I I R S
Sbjct: 208 ------YGQGGP------------PQQDLEVT-YLYIPESTVGACIGSKGSNIKEIMRLS 248
Query: 432 GATVTIQ 438
GA + I+
Sbjct: 249 GARIKIE 255
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
V + +P VG+ IG KG IK+I+ + ARIKI + + + M ++ P P
Sbjct: 220 VTYLYIPESTVGACIGSKGSNIKEIMRLSGARIKIENPQMQSGKNGDMNGDRKGP---TP 276
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTK--------------LLVPASQAGSL 236
P L K I+ G A K+ T+ +LVP S G +
Sbjct: 277 P-----LEERKVIITGTAEAQWKAQFYVFDKIKTEGGFQRIEEVHLRSEVLVPRSMIGRI 331
Query: 237 IGKQGGTVKSIQEASNCIVRV 257
IGK G V+ +Q S IV+V
Sbjct: 332 IGKGGQNVREMQRVSGAIVKV 352
>gi|357621941|gb|EHJ73587.1| hypothetical protein KGM_22691 [Danaus plexippus]
Length = 431
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 144/375 (38%), Gaps = 78/375 (20%)
Query: 138 AQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLL 197
++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ +
Sbjct: 3 GKEVGSIIGKKGEIVKRFREESGAKINISDGS--CPERIVTVTGNTSS----------IF 50
Query: 198 RVHKRIVDGLDSDSSHAPSGTGGK---VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCI 254
+ I + S G GG ++ +L+VPASQ GSLIGK G +K I++ + +
Sbjct: 51 KAFTLICKKFEEWCSQFNEGGGGSRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTGRL 110
Query: 255 VRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMP 314
+ +E LP +R V + G + + + I + + + IP
Sbjct: 111 YVHVASEMLPN---STERAVTISGTCDAITQCIYHICCVMLESPPKGATIP--------- 158
Query: 315 NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES--YYPPADLPPPM----- 367
+ P P GP + +GG Y Y P + A +P ++ PP+
Sbjct: 159 -----YRPKPNVAGP---VILAGGQAYTIQGNYAVPAQDAVCAPVFPMLEVKPPLVGALP 210
Query: 368 -----EKQPHQGISAYGRE-------------APVNVHG---------------SSNAQS 394
H + + P N G SSN
Sbjct: 211 PAHLLPPLDHHLMGGLAKSPLAGLAALGLGGLGPANTGGLNPAALAALAGSQLRSSNTGR 270
Query: 395 TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI---QETRGVPGEMTVEI 451
Q + +M +P +IG G I+ IR+ SGA + I +E G + T+ I
Sbjct: 271 NQPATNQQSHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTITI 330
Query: 452 SGTASQVQTAQQLIQ 466
SG V AQ LI
Sbjct: 331 SGNPDSVALAQYLIN 345
>gi|398365639|ref|NP_009792.3| Pbp2p [Saccharomyces cerevisiae S288c]
gi|586350|sp|P38151.1|PBP2_YEAST RecName: Full=PAB1-binding protein 2
gi|536633|emb|CAA85196.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946618|gb|EDN64840.1| pbp1p binding protein [Saccharomyces cerevisiae YJM789]
gi|190408618|gb|EDV11883.1| PAB1-binding protein 2 [Saccharomyces cerevisiae RM11-1a]
gi|207347516|gb|EDZ73659.1| YBR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272922|gb|EEU07890.1| Pbp2p [Saccharomyces cerevisiae JAY291]
gi|285810563|tpg|DAA07348.1| TPA: Pbp2p [Saccharomyces cerevisiae S288c]
gi|323310022|gb|EGA63217.1| Pbp2p [Saccharomyces cerevisiae FostersO]
gi|323334658|gb|EGA76032.1| Pbp2p [Saccharomyces cerevisiae AWRI796]
gi|323338741|gb|EGA79957.1| Pbp2p [Saccharomyces cerevisiae Vin13]
gi|323349811|gb|EGA84026.1| Pbp2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356159|gb|EGA87964.1| Pbp2p [Saccharomyces cerevisiae VL3]
gi|392301080|gb|EIW12169.1| Pbp2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 413
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 141/364 (38%), Gaps = 54/364 (14%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P + RML + I+G KG I +I ET ARI I + G ER V +
Sbjct: 64 PSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRG----- 118
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + + IV L + + +G ++S LL+P G +IGK+G ++
Sbjct: 119 -----TCDDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL-------V 299
I++ S ++ + + L +DR++ + G +H A I L F V
Sbjct: 174 IEDLS--AAKLFASPNQ--LLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNV 229
Query: 300 DRSIIPLFEMHMQMPNPQMDHIPPPQ----------------SWGPPQGLPPSGGPGYGH 343
RSI + Q + +DH P S+ P + LP S
Sbjct: 230 KRSI---YYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMA 286
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT 403
PQY + + P + P + + PV S A ++ V
Sbjct: 287 TPQYTTASVANATAFQPNFVIP----------NVTVLDGPV----ISPAPGNHLLMNFVQ 332
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
Q++ I + VIG G I+ ++ S+G ++ IQ+ E + I GT Q A
Sbjct: 333 QEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGTFMASQAAIM 392
Query: 464 LIQN 467
LI N
Sbjct: 393 LISN 396
>gi|290878251|emb|CBK39310.1| Pbp2p [Saccharomyces cerevisiae EC1118]
Length = 413
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 141/364 (38%), Gaps = 54/364 (14%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P + RML + I+G KG I +I ET ARI I + G ER V +
Sbjct: 64 PSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRG----- 118
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + + IV L + + +G ++S LL+P G +IGK+G ++
Sbjct: 119 -----TCDDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL-------V 299
I++ S ++ + + L +DR++ + G +H A I L F V
Sbjct: 174 IEDLS--AAKLFASPNQ--LLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNV 229
Query: 300 DRSIIPLFEMHMQMPNPQMDHIPPPQ----------------SWGPPQGLPPSGGPGYGH 343
RSI + Q + +DH P S+ P + LP S
Sbjct: 230 KRSI---YYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMA 286
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT 403
PQY + + P + P + + PV S A ++ V
Sbjct: 287 TPQYTTASVANATAFQPNFVIP----------NVTVLDGPV----ISPAPGNHLLMNFVQ 332
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
Q++ I + VIG G I+ ++ S+G ++ IQ+ E + I GT Q A
Sbjct: 333 QEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGTFMASQAAIM 392
Query: 464 LIQN 467
LI N
Sbjct: 393 LISN 396
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 156/362 (43%), Gaps = 66/362 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R +V +++ G IIG+ G+ + + E+T R + PG +R + ++
Sbjct: 44 LRAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSKVVPGVHDRVLTVTG---------- 93
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGTV 244
A+ G+ + + D L AP G GG V +LL+ +Q G++IG+QG +
Sbjct: 94 ALTGIADAYGLVADSL---VKGAPQMGMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKI 150
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD---R 301
K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K LVD R
Sbjct: 151 KQIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPDGIQKAVWEIG----KCLVDDEQR 202
Query: 302 SIIPLFEMHMQMPNPQMDHIPPPQSWGPP---QGLPPSGGPGYGHNPQYMPPPRQAE-SY 357
+ + P ++ Q GPP G P G GYG Y A+ +
Sbjct: 203 G----YGTVLYSPAVRV------QGGGPPLNGTGAPVGPGAGYGAPRSYNRTGNGADFTG 252
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVI 417
PA P ++ P P + Q TQ + IP +I
Sbjct: 253 AAPAPYSPRRQEGP----------LPTTNEDGEDIQ---------TQNISIPADMVGCII 293
Query: 418 GTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAP 475
G G+ IS IR+SSGA ++I + GE I+G ++ + A L+ +N AE
Sbjct: 294 GRGGSKISEIRKSSGARISIAKAPHDETGERMFTITGGSAANEKALYLLYENLEAEKMRR 353
Query: 476 SQ 477
SQ
Sbjct: 354 SQ 355
>gi|401626761|gb|EJS44683.1| pbp2p [Saccharomyces arboricola H-6]
Length = 416
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 142/363 (39%), Gaps = 52/363 (14%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P RML + I+G KG I KI ET ARI + + G ER V +
Sbjct: 67 PSHVHLRMLCLVKHASLIVGHKGATISKIKSETSARINVSNNIRGVPERIVYVRG----- 121
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + + IV L + + +V+ LL+P G +IGK+G ++
Sbjct: 122 -----TCDDVAKAYSMIVRALLEEHENEDQEEDIEVTINLLIPHHLMGCIIGKRGSRLRE 176
Query: 247 IQEASNCIVRVLGAEDLPV----FALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD-- 300
I++ L A L L +DR++ + G +H A IG L F ++
Sbjct: 177 IED--------LSAAKLFASPNQLLLSNDRILTISGVPDAIHIATFYIGQTLLNFQMESP 228
Query: 301 -----RSIIPLFEMHMQMPNPQMDHIPPPQSWGP------PQGLPPSGGPG--YGHNPQY 347
RSI F Q + +DH P P SG P + + +
Sbjct: 229 QKKLKRSI---FYQPTQFNSVLIDHSQPNAILHQRNHQYHPNDKQLSGRPNRKFSVSSTF 285
Query: 348 --MPPPRQAESYYPPADLPPPMEKQPHQGI-SAYGREAPVNVHGSSNAQSTPSMITQVTQ 404
M PP+ Y A + QP+ I + + V G SN S + V Q
Sbjct: 286 LNMAPPQ-----YTTASVANATAFQPNFVIPNVRILDGSVVNSGISNHLS----MNLVQQ 336
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
++ I ++ VIG G I+ ++ S+G ++ IQ+ E + I GT Q A L
Sbjct: 337 EIFIDENFVGNVIGKDGKHINSVKESTGCSIIIQDPVECASERRLSIRGTFMASQAAIML 396
Query: 465 IQN 467
I N
Sbjct: 397 ISN 399
>gi|349576607|dbj|GAA21778.1| K7_Pbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 413
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 141/364 (38%), Gaps = 54/364 (14%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P + RML + I+G KG I +I ET ARI I + G ER V +
Sbjct: 64 PSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRG----- 118
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + + IV L + + +G ++S LL+P G +IGK+G ++
Sbjct: 119 -----TCDDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL-------V 299
I++ S ++ + + L +DR++ + G +H A I L F V
Sbjct: 174 IEDLS--AAKLFASPNQ--LLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNV 229
Query: 300 DRSIIPLFEMHMQMPNPQMDHIPPPQ----------------SWGPPQGLPPSGGPGYGH 343
RSI + Q + +DH P S+ P + LP S
Sbjct: 230 KRSI---YYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMA 286
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT 403
PQY + + P + P + + PV S A ++ V
Sbjct: 287 TPQYTTASVANATAFQPNFVIP----------NVTVLDGPV----ISPAPGNHLLMNFVQ 332
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
Q++ I + VIG G I+ ++ S+G ++ IQ+ E + I GT Q A
Sbjct: 333 QEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGTFMASQAAIM 392
Query: 464 LIQN 467
LI N
Sbjct: 393 LISN 396
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 146/356 (41%), Gaps = 50/356 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + PG +R + ++ +
Sbjct: 48 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQ-------- 99
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
+ L R + + GL AP G GG VS +LL+ +Q G++IG+QG
Sbjct: 100 --LRSLARAYAIVAKGL---LEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQGLK 154
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG L +
Sbjct: 155 IKHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAIWEIGKCLLDDWQRGTG 210
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
L+ NP + S P P G GY +N RQ AD
Sbjct: 211 TVLY-------NPA---VRASLSGSQPLNNNPPAGNGYQNN----TSSRQYNRTGNGADF 256
Query: 364 PPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGAS 423
Y R + + T TQ + IP +IG G
Sbjct: 257 SD----------GGYNRRSNSDAGNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGTK 306
Query: 424 ISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
I+ IRRSSGA ++I + GE I G+A + A L+ +N AE SQ
Sbjct: 307 ITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTRRSQ 362
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 151/351 (43%), Gaps = 64/351 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPS-------GGPGYGHNPQYMPPPRQAESYYPP 360
E Q+ ++ PP+ P PS GG Y QY P +
Sbjct: 157 ECVKQICVVMLES--PPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 361 A----DLPPPMEKQPHQGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADA 415
A P GI + E G ++AQ+T + ++ IP
Sbjct: 215 AMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTT-------SHELTIPNDLIGC 267
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+I GA I+ IR+ SGA + I + V I+G+A+ + AQ LI
Sbjct: 268 IIRRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLIN 318
>gi|32564028|ref|NP_491825.2| Protein F26B1.2, isoform c [Caenorhabditis elegans]
gi|373218907|emb|CCD64193.1| Protein F26B1.2, isoform c [Caenorhabditis elegans]
Length = 380
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 151/368 (41%), Gaps = 64/368 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G+ R+LV ++ G+IIG+ GE IK++ E A +++ D T ER ++A E+
Sbjct: 31 GKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADEKT-- 86
Query: 188 SLPPAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+L + K ++ L D+ S P ++LV S AG+LIG+ G +K
Sbjct: 87 --------VLNILKDVLPRLEDNFSERDP------CEVRMLVHQSHAGALIGRNGSKIKE 132
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
++E + +++ DRV+ G+ V +E + L++ + S P
Sbjct: 133 LREKCSARLKIFTG----CAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPY 188
Query: 307 FEMHMQMPNPQMDH------IP---PPQSWGPPQ---------------GLPPSGGPGY- 341
P+ D+ +P PP + GP G GG
Sbjct: 189 LPAFNYDPSNISDYGGFPGNMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRS 248
Query: 342 ---GHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSM 398
G Q+ P Y A PP + Q +G AP N +
Sbjct: 249 FEAGDFQQFRGGPGPVPGYAMSAPGYPPQQGQ-------FG--APNNAGYGYGPGGGGPV 299
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
T Q+ IP +IG G I+ IR+ SGA +T++++ G P E + I GT Q+
Sbjct: 300 ---TTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQP-ERIITIKGTEQQI 355
Query: 459 QTAQQLIQ 466
+AQ L+Q
Sbjct: 356 HSAQYLLQ 363
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 24/117 (20%)
Query: 72 QVPEDHVPED--QVPEDHVPEDQVPEDIVPE-DSQLQEKQENEVNLAVGSTEKKWPGWPG 128
QVP+ + PE V D + +D++P + E+ EV
Sbjct: 67 QVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNFSERDPCEV---------------- 110
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEE 184
RMLV G++IGR G IK++ E+ AR+KI G PG+T+R ++ S +++
Sbjct: 111 ----RMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQK 163
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 157/377 (41%), Gaps = 65/377 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RM++ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I LD D P G V+ +L++PASQ GSLIGK G +K I
Sbjct: 68 STGAVFHAVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEI 127
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 128 RETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAVI 170
Query: 308 EMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
++ P P+ IP P S G + S G+ QY PA++
Sbjct: 171 ---LESP-PKGATIPYHPSLSLGT---VLLSANQGFSVQGQY--------GTVTPAEVSK 215
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
+ H A +P V G + T S Q+ +P VIG G+ IS
Sbjct: 216 LQQLSGHPVPFA----SPSVVPGLDPSAQTSS------QEFLVPNDLIGCVIGRQGSKIS 265
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASAD 485
IR+ SGA + I GE V I+G+ + AQ LI + A + S G+
Sbjct: 266 EIRQMSGAHIKIGNQAEGSGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSGTA 325
Query: 486 QGYNPYASMYGSPPSNP 502
P+ SPP P
Sbjct: 326 DLSAPF-----SPPLAP 337
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 162/388 (41%), Gaps = 60/388 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ P +S+
Sbjct: 16 TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---PTNSIF 70
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVK 245
A + + + D +G GG VS +L+VPASQ GSLIGK G +K
Sbjct: 71 KAFTLICKKFEEWCSQFH-DIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIK 129
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIP 305
I+E + ++V +E LP +R V + G + + + + I + + + IP
Sbjct: 130 EIREVTGASIQV-ASEMLPN---STERAVTISGTSEAITQCIYHICCVMLESPPKGATIP 185
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGY-----------------GHNPQYM 348
+ P PQ GP + +GG Y G NP
Sbjct: 186 --------------YRPKPQVGGP---VILAGGQAYTIQGNYAVPAHSDMGKLGSNPLAS 228
Query: 349 PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQI 408
PA+ P + G + + S+ + P+ Q T +M +
Sbjct: 229 LAALGLGGLATPANTG---GLNPAALAALAGSQ----LRTSNTNRQQPAANNQ-THEMTV 280
Query: 409 PLSYADAVIGTAGASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLI 465
P +IG G I+ IR+ SGA + I +E G + T+ I+G V AQ LI
Sbjct: 281 PNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLI 340
Query: 466 QNFMAEAAAPSQAQMGASADQGYNPYAS 493
+ A +AQ + G P AS
Sbjct: 341 NMSVELQKANLEAQNTQTPGSGTTPGAS 368
>gi|256079872|ref|XP_002576208.1| rna-binding protein related [Schistosoma mansoni]
gi|353231011|emb|CCD77429.1| rna-binding protein related [Schistosoma mansoni]
Length = 666
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 108/250 (43%), Gaps = 44/250 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP---PGTTERAVMISAKEEPESS 188
F++LVP+ G+IIG+ GE I +I +T A++K+ PGTTER +I
Sbjct: 45 FKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVG------- 97
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAP-SGTGGKVST------KLLVPASQAGSLIGKQG 241
++ +LRV + I + + P +G G+V T K+LVP S AG +IGK G
Sbjct: 98 ---TIESILRVFQYISEKIYEKPESVPKTGCEGRVLTERHKQVKILVPNSTAGMIIGKGG 154
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR 301
+K +++ + ++V A +R V V G+ S A+ LI L K D
Sbjct: 155 SFIKELKDTTGVFIQVSQKSKELNLA---ERCVTVAGELSQTRDAIALI---LSKIAED- 207
Query: 302 SIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLP-----------PSGGPGYGHNPQYMPP 350
PN I P + P G P P+ G G+G + +
Sbjct: 208 ------PQSSSCPNISYSEIIGPVASAYPTGSPYALAVGSHPGLPACGMGFGSDMHFRAA 261
Query: 351 PRQAESYYPP 360
P S+ PP
Sbjct: 262 PGSNSSFLPP 271
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 78/277 (28%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-SAKEEP- 185
G++V+R+L P++K+G +IG+ G +K + EET+++I + D G+ ER ++I S+ ++P
Sbjct: 42 GDTVYRILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPP 101
Query: 186 -----ESSLP-------------PAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKV 222
+ LP A D LL+VH RIV+ G+ SD + V
Sbjct: 102 RKMDGDEGLPAGNGQQEAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDN----DNNVV 157
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASG 282
+ +LLVP + G ++GK+G ++ ++ + +RVL A+ LP A+ D +V++ G +
Sbjct: 158 TARLLVPNNMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAV 217
Query: 283 VHKAMELIGSHLRKFLVDRSIIPLFEMHMQM-PNPQMDHIPPPQSWGPPQGLPPSGGPGY 341
+A L+E+ + + NP+ D +P
Sbjct: 218 AKRA-------------------LYEISILLHQNPRKDKLPS------------------ 240
Query: 342 GHNPQYMPPPRQAESYYPPAD-----LPPPMEKQPHQ 373
+P P +++PP+D LPP PH+
Sbjct: 241 ------VPMPYGGRTFHPPSDSMANMLPPGNPMWPHR 271
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 152 IKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDS 211
+K + +ET A I + D + ERA+ +SA E + +D +L++ + SD
Sbjct: 333 VKIVQQETGASIHVEDASAESEERAIRVSAFEGLWNPRSQTIDAILQLQDKT-----SDF 387
Query: 212 SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDD 271
S G + T+LLVP+S+ G ++G+ G + ++ +RV D P A D+
Sbjct: 388 SEK-----GMIITRLLVPSSKVGCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDE 442
Query: 272 RVVEVVGDASGVHKAMELIGSHLR 295
+V++ G+ A+ I S LR
Sbjct: 443 ELVQISGNYGVAKDALAEIASRLR 466
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 154/377 (40%), Gaps = 65/377 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G+ R+LVP++ G++IG+ GE IK++ E A + I D T ER V I A+
Sbjct: 36 GKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQ--TPERIVTIVAE----- 88
Query: 188 SLPPAMDGLLRVHKRIVDGLD----SDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+D ++R I+ LD + S G+ +LLV S AG++IG+ G
Sbjct: 89 -----IDNVIRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYR 143
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K ++E ++ ++V ++ P +RV++++G + + LI + L++ +
Sbjct: 144 IKELREETSTQLKVY-SQCCP---QSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPS 199
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD- 362
P M P + H PP R P
Sbjct: 200 RPYESMFYD--------------------------PNFVHEYGGFPPDRNYRGMGPRGGM 233
Query: 363 ----LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
LPP + P+ G G G S P T Q+ IP +IG
Sbjct: 234 YGGGLPPRAPRFPYGG-RGMG-------MGVSPFPPAPFGGPMQTTQVTIPNELGGTIIG 285
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQA 478
G I+ IR SGA + + E + E + ISG+ +Q+QTAQ L+Q ++ A
Sbjct: 286 KGGERINRIREESGAHIVV-EPQQPNSERIITISGSHAQIQTAQYLLQQWIVRFPNKYPA 344
Query: 479 QMGASADQGYNPYASMY 495
A YN YA +
Sbjct: 345 -----AQPRYNAYARRW 356
>gi|407924223|gb|EKG17277.1| K-like protein [Macrophomina phaseolina MS6]
Length = 357
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 150/365 (41%), Gaps = 73/365 (20%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET R + PG +R + ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGQNVANLRDETGVRAGVSKVVPGVHDRVLTVTG--------- 96
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
A+ G+ + + + GL APS G GG ++T +LL+ +Q G++IG+ G
Sbjct: 97 -ALSGISKAYHLVAKGLLEG---APSVGMGGVINTSGTHPVRLLISHNQMGTIIGRAGLK 152
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR-- 301
+K IQ+AS VR++ +++ +R+VE+ G G+ KA IG K L+D
Sbjct: 153 IKQIQDASG--VRMVAQKEM--LPQSTERIVEIQGTPEGIEKATWEIG----KCLIDDHE 204
Query: 302 ----SII--PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
+++ P + P + +S+ GH + P +
Sbjct: 205 RGYGTVLYNPAVRVQAGTTGPVTNGFTGNRSYNRT-----------GHGNDFSDSPTYSR 253
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
A PPM P Q TQ + IP
Sbjct: 254 RSGSDAASRPPM---------------PTTTEDGEEIQ---------TQNISIPSDMVGC 289
Query: 416 VIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAA 473
+IG G+ IS IR+SSGA ++I + GE I G+ S + A L+ +N AE
Sbjct: 290 IIGRGGSKISEIRKSSGARISIAKAPHDETGERMFTIMGSPSSNEKALYLLYENLEAEKM 349
Query: 474 APSQA 478
SQA
Sbjct: 350 RRSQA 354
>gi|380478963|emb|CCF43298.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 469
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 144/357 (40%), Gaps = 56/357 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + I + + A+ + D G ER + +S
Sbjct: 113 IRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSG---------- 162
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + I+ L+++ PS K +LL+P GS+IGK G ++ IQEA
Sbjct: 163 VVDAAAKAFGLIIRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEA 222
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A +GS L + L DR P +
Sbjct: 223 SGA---RLNASD-SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAY 278
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY------------MPP-PRQAESY 357
+P P P +G YG+ Y +P P A+ Y
Sbjct: 279 ATRSGGPAGVVPGGMQVVPYSPQPTTGN--YGNRENYNRRHDARAQHHGLPAAPYGAQPY 336
Query: 358 YPPADLPPPME-----------------KQPHQGISA---YGREAPVNVHGSSNAQSTPS 397
P A P P QPH G + +G +HG + A +
Sbjct: 337 PPHAAQPNPAMPIHYGAAQAGGYGAAAPMQPHAGAAVPQPHGAHPAQPIHGGAVAGAP-- 394
Query: 398 MITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
+TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V I+GT
Sbjct: 395 ----LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGT 447
>gi|25144314|ref|NP_740869.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
gi|373218905|emb|CCD64191.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
Length = 397
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 151/368 (41%), Gaps = 64/368 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G+ R+LV ++ G+IIG+ GE IK++ E A +++ D T ER ++A E+
Sbjct: 48 GKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADEKT-- 103
Query: 188 SLPPAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+L + K ++ L D+ S P ++LV S AG+LIG+ G +K
Sbjct: 104 --------VLNILKDVLPRLEDNFSERDP------CEVRMLVHQSHAGALIGRNGSKIKE 149
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
++E + +++ DRV+ G+ V +E + L++ + S P
Sbjct: 150 LREKCSARLKIFTG----CAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPY 205
Query: 307 FEMHMQMPNPQMDH------IP---PPQSWGPPQ---------------GLPPSGGPGY- 341
P+ D+ +P PP + GP G GG
Sbjct: 206 LPAFNYDPSNISDYGGFPGNMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRS 265
Query: 342 ---GHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSM 398
G Q+ P Y A PP + Q +G AP N +
Sbjct: 266 FEAGDFQQFRGGPGPVPGYAMSAPGYPPQQGQ-------FG--APNNAGYGYGPGGGGPV 316
Query: 399 ITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
T Q+ IP +IG G I+ IR+ SGA +T++++ G P E + I GT Q+
Sbjct: 317 ---TTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQP-ERIITIKGTEQQI 372
Query: 459 QTAQQLIQ 466
+AQ L+Q
Sbjct: 373 HSAQYLLQ 380
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 24/117 (20%)
Query: 72 QVPEDHVPED--QVPEDHVPEDQVPEDIVPE-DSQLQEKQENEVNLAVGSTEKKWPGWPG 128
QVP+ + PE V D + +D++P + E+ EV
Sbjct: 84 QVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNFSERDPCEV---------------- 127
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEE 184
RMLV G++IGR G IK++ E+ AR+KI G PG+T+R ++ S +++
Sbjct: 128 ----RMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQK 180
>gi|159129031|gb|EDP54145.1| KH domain RNA binding protein [Aspergillus fumigatus A1163]
Length = 464
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 155/370 (41%), Gaps = 52/370 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ +Q+ ++IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 114 IRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQ-------- 165
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 166 --DAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEA 223
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 224 SGA---RLNASD-SCLPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAY 279
Query: 311 MQMPNPQMDHIPPPQSWGP--PQGLPPSGGPGYGH---NPQYMPPPRQAES--------- 356
+P P PQ P+GG YGH ++ P P +A +
Sbjct: 280 ATRSGGPAGAVPGGMQVVPYVPQ---PAGGQ-YGHPEHFKRHHPHPNRAAAGAYGVPYLH 335
Query: 357 -------------YYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPS---MIT 400
+Y A P PHQ + YG P G+ +TP M
Sbjct: 336 GQPAPAPVAQPALHYGAAPHAPYAGAGPHQ-PAPYGAPQPAQARGAPTP-ATPVGGVMPG 393
Query: 401 Q-VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
Q +TQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQ 453
Query: 460 TAQQLIQNFM 469
A ++ + +
Sbjct: 454 MALYMLYSRL 463
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 160/348 (45%), Gaps = 57/348 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + ++ P +++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTTAI-- 68
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ I++ L+ D S + S + V+ +++VPASQ GSLIGK G +K I
Sbjct: 69 -----FKAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP + +A+ + G+ L + I +
Sbjct: 124 RESTGAQVQVAG-DMLP----------------NSTERAITIAGTPLSIIECVKQICVVM 166
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
++ P P+ IP P+ G P + +GG Y Q+ P + A P
Sbjct: 167 ---LESP-PKGVTIPYRPKPSGSP--VIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 367 MEKQPH-QGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
P QG +A G +A +AQ+ + ++ IP +IG GA I+
Sbjct: 221 FPLAPSSQGFTA-GMDA--------SAQTG-------SHELTIPNDLIGCIIGRQGAKIN 264
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
IR+ SGA + I + V I+G+ + + A+ LI ++ A
Sbjct: 265 EIRQMSGAQIKIANPVEGSSDRQVTITGSPASISLAEYLINARLSSEA 312
>gi|119480179|ref|XP_001260118.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408272|gb|EAW18221.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 464
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 152/369 (41%), Gaps = 50/369 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ +Q+ ++IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 114 IRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQ-------- 165
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 166 --DAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEA 223
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 224 SGA---RLNASD-SCLPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAY 279
Query: 311 MQMPNPQMDHIPPPQSWGP--PQGLPPSGGPGYGH---NPQYMPPPRQAES--------- 356
+P P PQ P+GG YGH ++ P P +A +
Sbjct: 280 ATRSGGPAGAVPGGMQVVPYVPQ---PAGGQ-YGHPEHFKRHHPHPNRAAAGAYGVPYLH 335
Query: 357 -------------YYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ-- 401
+Y A P PHQ + YG P G+ + +
Sbjct: 336 GQPAPAPVAQPALHYGAAPHAPYAGAGPHQ-PAPYGAPQPAQARGAPTPATPVGGVMPGQ 394
Query: 402 -VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQT 460
+TQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q
Sbjct: 395 PLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQM 454
Query: 461 AQQLIQNFM 469
A ++ + +
Sbjct: 455 ALYMLYSRL 463
>gi|307181420|gb|EFN69015.1| RNA-binding protein Nova-1 [Camponotus floridanus]
Length = 514
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 34/192 (17%)
Query: 117 GSTEKKWPGWPGESVF--RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
G+T++ G G+ + ++LVP G+IIG+ G+ I ++ ++T AR+K+ D PG
Sbjct: 30 GATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPG 89
Query: 172 TTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGL------------DSDSSHAPSGTG 219
TTER +I+ +D ++ V + I+D + D DS A +
Sbjct: 90 TTERVCLITG----------TVDAIMEVMEFIMDKIREKPDLTSKTTVDFDSGKATAERD 139
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVG 278
+V K+LVP S AG +IGK G +K I+E S V++ A+DL +LQ +R + V+G
Sbjct: 140 KQV--KILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDL---SLQ-ERCITVIG 193
Query: 279 DASGVHKAMELI 290
+ H+A+ +I
Sbjct: 194 EKENNHRALHMI 205
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 207 LDSDS-------SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLG 259
LD D+ SH SG G K+LVP AG++IGK G T+ +Q+ + V++
Sbjct: 23 LDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSK 82
Query: 260 AEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ D + +RV + G + + ME I +R+
Sbjct: 83 SHDF--YPGTTERVCLITGTVDAIMEVMEFIMDKIRE 117
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 149/357 (41%), Gaps = 51/357 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + PG +R + ++
Sbjct: 228 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 278
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST------KLLVPASQAGSLIGKQGGTV 244
A+ G R + + GL + G GG VS +LL+ +Q G++IG+QG +
Sbjct: 279 -ALSGTARAYALVAKGLLEGAPQM--GMGGIVSNNGTHPIRLLISHNQMGTIIGRQGLKI 335
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 336 KHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAIWEIG----KCLID---- 383
Query: 305 PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
Q + + P +S + +GG +N + P R AD
Sbjct: 384 -----DWQRGTGTILYNPAVRSSVGSGSIQHNGGNSDSYNSR--PYNRTGNG----ADFS 432
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
YGR + + T TQ + IP +IG G I
Sbjct: 433 DQS--------GGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGTKI 484
Query: 425 SYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQAQ 479
+ IRRSSGA ++I + GE I G+A + A L+ +N AE SQ Q
Sbjct: 485 TEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTRRSQLQ 541
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
FR+L+P G +IG+KG IK I ET A I + G ER + I A E P+S
Sbjct: 280 FRLLLPTYLAGGLIGKKGLIIKGIEVETGACIDVGAPVAGCKERVITICALESPDSEYHI 339
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
LL + R+++ ++H+ + ++LV +Q G L+G G +K + +
Sbjct: 340 VQSALLLIFDRMMEM--ETNTHSTFEKASQFLVRVLVLKNQFGCLVGLGGSIIKEMVNTT 397
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL 298
+++L ++P A + VV++ G+ + A+ L+ LR +
Sbjct: 398 GARIQILDDTEIPACASTFELVVQITGELMNIRNALSLVFWKLRNHI 444
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 154/348 (44%), Gaps = 51/348 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + ++ P +S
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTTS--- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I++ L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 68 ----IFKAFSMIIEKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + V G + + ++ I I +
Sbjct: 124 RESAGAQVQVAG-DMLPN---STERAITVAGTPQSIIECVKQI------------CIVML 167
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
E PP+ P PSG P Q Q P P +
Sbjct: 168 E-------------SPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDVSEGPSL 214
Query: 368 EKQPHQGISAYGREAPVNV-HGSSNAQSTPSMITQV-TQQMQIPLSYADAVIGTAGASIS 425
K HQ +++P + H + Q+ Q + ++ IP +IG GA I+
Sbjct: 215 TKL-HQ---LAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKIN 270
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
IR+ SGA + I + V I+G+ + + A+ LI ++ A
Sbjct: 271 EIRQMSGAQIKIANPVEGSTDRQVTITGSHASISLAEYLINARLSSEA 318
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 141/344 (40%), Gaps = 43/344 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S
Sbjct: 25 TIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG--------- 73
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I + S G GK + +L+VPASQ GSLIGK G +K I
Sbjct: 74 -TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
++ + C ++V +E LP + +A+ L GS + + + I +
Sbjct: 133 RQTTGCSIQV-ASEMLP----------------NSTERAVTLSGSAEQ---ITQCIYQIC 172
Query: 308 EMHMQMP--NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
+ ++ P + + P PQ GP + + G + Y P ++ +
Sbjct: 173 LVMLESPPRGATIPYRPKPQVTGP---VILANGQAFTIQGNYAVPTQEVAKNPLASLAAL 229
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
+ A + GS + + Q +M + +IG G I+
Sbjct: 230 GLAGMTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKIA 289
Query: 426 YIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IR+ SGA + I +E G + T+ ISG V AQ LI
Sbjct: 290 EIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLIN 333
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 21/173 (12%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI-------SA 181
++++R L P +K+GSII R + +K+ +T+ +I I D G E V I +
Sbjct: 291 DTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESNV 350
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
+ + + P + L RVH R++ SD H + ASQ G +IGK G
Sbjct: 351 FDNSNTFVSPTQNVLFRVHDRVI----SDEVHDEN----------FEEASQIGCVIGKGG 396
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
++SI+ S +R+L + LP L D+++++ G+ S V KA+ I S L
Sbjct: 397 QIIQSIRSESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRL 449
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 161/348 (46%), Gaps = 57/348 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + ++ P +S+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTTSI-- 68
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ I++ L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 69 -----FKAFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I
Sbjct: 124 RESAGAQVQVAG-DMLPN---STERAITIAGTPQSIIECVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPADLPP 365
+ ++ P P+ IP P+ G P + +GG Y Q+ +P P + + P
Sbjct: 164 VVMLESP-PKGVTIPYRPKPSGSP--VIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
+QG A G +A +AQ+ + ++ IP +IG GA I+
Sbjct: 221 FPIAHSNQGFQA-GMDA--------SAQTG-------SHELTIPNDLIGCIIGRQGAKIN 264
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
IR+ SGA + I + V I+G+ + + A+ LI ++ A
Sbjct: 265 EIRQMSGAQIKIANPVEGSTDRQVTITGSHASISLAEYLINARLSSEA 312
>gi|332026626|gb|EGI66735.1| RNA-binding protein Nova-1 [Acromyrmex echinatior]
Length = 514
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 34/192 (17%)
Query: 117 GSTEKKWPGWPGESVF--RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
G+T++ G G+ + ++LVP G+IIG+ G+ I ++ ++T AR+K+ D PG
Sbjct: 30 GATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPG 89
Query: 172 TTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGL------------DSDSSHAPSGTG 219
TTER +I+ +D ++ V + I+D + D DS A +
Sbjct: 90 TTERVCLITG----------TVDAIMEVMEFIMDKIREKPDLTSKTTVDFDSGKATAERD 139
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVG 278
+V K+LVP S AG +IGK G +K I+E S V++ A+DL +LQ +R + V+G
Sbjct: 140 KQV--KILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDL---SLQ-ERCITVIG 193
Query: 279 DASGVHKAMELI 290
+ H+A+ +I
Sbjct: 194 EKENNHRALHMI 205
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 207 LDSDS-------SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLG 259
LD D+ SH SG G K+LVP AG++IGK G T+ +Q+ + V++
Sbjct: 23 LDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSK 82
Query: 260 AEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ D + +RV + G + + ME I +R+
Sbjct: 83 SHDF--YPGTTERVCLITGTVDAIMEVMEFIMDKIRE 117
>gi|70989551|ref|XP_749625.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
gi|66847256|gb|EAL87587.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
Length = 464
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 150/366 (40%), Gaps = 44/366 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ +Q+ ++IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 114 IRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQ-------- 165
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 166 --DAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEA 223
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 224 SGA---RLNASD-SCLPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAY 279
Query: 311 --------------MQM----PNPQMDHIPPPQSWGPPQGLPPSGGPG-----YGHNPQY 347
MQ+ P P P+ + P G Y H
Sbjct: 280 ATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPEHFKRHHHHPNRAAAGAYGVPYLHGQPA 339
Query: 348 MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPS---MITQ-VT 403
P Q +Y A P PHQ + YG P G+ +TP M Q +T
Sbjct: 340 PAPVAQPALHYGAAPHAPYAGAGPHQ-PAPYGAPQPAQARGAPTP-ATPVGGVMPGQPLT 397
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
QQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q A
Sbjct: 398 QQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALY 457
Query: 464 LIQNFM 469
++ + +
Sbjct: 458 MLYSRL 463
>gi|358056167|dbj|GAA97907.1| hypothetical protein E5Q_04587 [Mixia osmundae IAM 14324]
Length = 531
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 163/393 (41%), Gaps = 91/393 (23%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
+ R LV +++ G +IGR+G+ + I E+ + + + PG +ER + ++ +
Sbjct: 144 IMRALVSSREAGIVIGRQGKNVADIREKAQVKAGVSKLVPGVSERVLTVTGQ-------- 195
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGT--------GGKVSTKLLVPASQAGSLIGKQGG 242
+ G+ R I + +SS P+ + G ++ +LL+ ++Q G +IGK G
Sbjct: 196 --ISGVARAFGLICQTIMDNSSGIPNDSPSTYTGLSGSTLTLRLLISSAQMGGVIGKAGT 253
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLV--D 300
+KSIQ+ S R+ +++L +R+VE+ G V KA+ I K LV +
Sbjct: 254 KIKSIQQTSG--TRMAASKEL--LPQSTERLVEISGRPEQVEKAVAEIA----KALVEDE 305
Query: 301 RSIIPLFEMHMQMPNPQMD---HIPP---PQSWGPPQGLPPSG---GPG----------- 340
+ H NP++ IPP S G P + PG
Sbjct: 306 AKAVGTIAFHPANLNPELSGLQSIPPIMRSSSSGTASRAPAASDGRAPGMMSMQQPHQQP 365
Query: 341 -----------------------YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISA 377
YG+ + PPPR+ Y PP QG A
Sbjct: 366 QHMYPAAYAQHAQPAPAPAAAPLYGYTNDHAPPPRR---YVPP------------QGYRA 410
Query: 378 YG-REAPVNVHGSSNAQSTPSMI---TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGA 433
R P + + ++ + ++ + TQ + IP +IG G I+ IR+SSG+
Sbjct: 411 NDPRNTPQDRYRANASIASAAHAPDPNLRTQNISIPSDMVGCIIGKGGQKINDIRKSSGS 470
Query: 434 TVTIQET-RGVPGEMTVEISGTASQVQTAQQLI 465
++I +T GE I+GTA +TA L+
Sbjct: 471 KISIAKTAHDETGERMFTITGTAQNNETALFLL 503
>gi|391326103|ref|XP_003737564.1| PREDICTED: RNA-binding protein Nova-1-like [Metaseiulus
occidentalis]
Length = 430
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 59/270 (21%)
Query: 112 VNLAVGSTEKKWPGWPGESV----FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL- 166
V+ V ST G PG + F++LVPA G+IIG+ GE I ++ ++ AR+K+
Sbjct: 3 VDRNVASTAASAGGSPGLTAPTYHFKILVPAVAAGAIIGKGGETIAQVQKDCGARVKMSK 62
Query: 167 --DGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVD------------GLDSDSS 212
D PGTTER +I+ ++G++++H I+D G+D D
Sbjct: 63 SNDFYPGTTERVCLITG----------TVEGIVKIHNFIMDKIKEKPDPNSRTGVDFDHK 112
Query: 213 HAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDR 272
P+ +V K+LVP S AG +IGK G +K I+E SN +++ A +R
Sbjct: 113 Q-PAEREKQV--KILVPNSTAGMIIGKGGSYIKQIKEDSNVYIQLSQKSRDHALA---ER 166
Query: 273 VVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQ---MDHIPPPQSWGP 329
+ ++G+ KA++L+ L K + D PQ ++ + GP
Sbjct: 167 SITIIGELEPTRKAVDLV---LAKIVED---------------PQSGSCLNVSYADAQGP 208
Query: 330 PQGLPPSGGPGYGH--NPQYMPPPRQAESY 357
P+G P Y + N Q+ PP ES
Sbjct: 209 VANFNPTGSP-YANPTNLQHSPPGGNVESL 237
>gi|367019960|ref|XP_003659265.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
gi|347006532|gb|AEO54020.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
Length = 482
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 151/388 (38%), Gaps = 87/388 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + KI + + A+ + D G ER + +S
Sbjct: 125 VRAVISSPEAATIIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSG---------- 174
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ + PS K +LL+P GS+IGK G +K IQEA
Sbjct: 175 IVDAVAKAFGLIIRTLNNEPLNEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEA 234
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--------- 301
S L A D L +R + V+G A VH A +GS L + L +R
Sbjct: 235 SGA---RLNASD-SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGAAASAY 290
Query: 302 ---------------SIIPLF------------EMHMQMPNPQMDHIPP----------- 323
+IP + +P+ H+PP
Sbjct: 291 ATRSGGPAGAVPGGMQVIPYNPQPAGGNYGNRDNYYRARADPRAHHMPPQAYPPPYGHPH 350
Query: 324 PQSWGPPQGLPPSGGP--GYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGRE 381
P GP +P P YG P P P PH +G+
Sbjct: 351 PAHPGPAVPMPYGAHPAAAYGAGPHVQPHPVG--------------HAGPHVATGPHGQP 396
Query: 382 APVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETR 441
P G+++ P +TQQ+ IP A+IG G I+ IR+ SG+ + I E +
Sbjct: 397 MP----GAAHVPGAP-----LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQ 447
Query: 442 GVPGEMTVEISGTASQVQTAQQLIQNFM 469
E V I+GT + A ++ + +
Sbjct: 448 DNSNERLVTITGTEECNRMALYMLYSRL 475
>gi|213410260|ref|XP_002175900.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces japonicus yFS275]
gi|212003947|gb|EEB09607.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces japonicus yFS275]
Length = 381
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 138/330 (41%), Gaps = 67/330 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ ++ G IIG+ G+ + ++ T + I P +R + IS
Sbjct: 88 LRALLSTREAGIIIGKSGKNVAELRSTTNVKAGITKAVPNVHDRVLTISG---------- 137
Query: 192 AMDGLLRVHKRIVDGLDSDSSHA---PSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+++ ++R ++ I+D +S++A P +LL+ S GS+IG+ G +K IQ
Sbjct: 138 SLENVVRAYRFIIDIFAKNSTNANGTPVDPHAPRKLRLLIAHSLMGSIIGRNGLRIKLIQ 197
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD---RSIIP 305
+ +C R++ ++D+ +R VEV G +H A+ IG K L+D R
Sbjct: 198 DKCSC--RMIASKDM--LPQSTERTVEVHGTVENLHAAIWEIG----KCLIDDWERGAGT 249
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
+F P ++ P P P+ + P +P P + P PP
Sbjct: 250 VF----YNPVSRLTQ-PFPTVATSPRAVSQQMTPA-------IPSP-MMDGGAAPYFFPP 296
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
+QP ++TQ + IP +IG AG+ IS
Sbjct: 297 AAPQQP-----------------------------RITQNISIPADMVGCIIGRAGSKIS 327
Query: 426 YIRRSSGATVTI-QETRGVPGEMTVEISGT 454
IRRSSG+ ++I +E GE I+GT
Sbjct: 328 EIRRSSGSKISIAKEPHDETGERMFTITGT 357
>gi|392595587|gb|EIW84910.1| hypothetical protein CONPUDRAFT_117160 [Coniophora puteana
RWD-64-598 SS2]
Length = 378
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 137/348 (39%), Gaps = 60/348 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 60 MRCLIVTQDASIIIGKGGTHVNEIREKSGARVVVSESIPGNPERILNVSGP--------- 110
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGKQG +K IQ+A
Sbjct: 111 -LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDA 169
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S R+ +E + +RV+ V G A +H A IG+ L++ +
Sbjct: 170 SGA--RLNASEGM--LPGSTERVLSVAGVADAIHIATYYIGN----ILIEAN-------- 213
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
+ LP SG Y + PP SY P P
Sbjct: 214 --------------------ERLPSSGNSSYRPSSYTRRPPYTGSSYVPGYSSSQPYAGG 253
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
P G P G TQQ+ IP +IG G+ I+ IR
Sbjct: 254 PGGPGGPGGPPGPPGPGGPGGPGGPNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHM 313
Query: 431 SGATVTIQE-------TRGVP------GEMTVEISGTASQVQTAQQLI 465
S + + I E G P GE V I+G + +Q A QL+
Sbjct: 314 SASQIKIMEPGAVGVGMNGAPAPSGGEGERLVVITGQPANIQMAVQLL 361
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 156/366 (42%), Gaps = 72/366 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + ++T R + PG +R + ++
Sbjct: 42 TLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTG--------- 92
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST------KLLVPASQAGSLIGKQGGTV 244
A+ G+ + + D L G GG V +LL+ +Q G++IG+QG +
Sbjct: 93 -ALTGISDAYGLVADSLVKGVPQM--GMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKI 149
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--- 301
K IQ+AS VR++ +++ +R+VEV G GV KA+ IG K L+D
Sbjct: 150 KQIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGVQKAVWEIG----KCLIDDEQR 201
Query: 302 ---SII--PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSG-GPGY--GHNPQYMPPPRQ 353
+++ P + P P ++ S+G P+ +G G + G +P PP R
Sbjct: 202 GYGTVLYSPAVRVQGGAPAPPLNGTGA--SYGAPRSYNRTGNGADFTGGQSPSSYPPRRN 259
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
P+D PP + + I TQ + IP
Sbjct: 260 G-----PSDGGPPPRPEDGEDIQ--------------------------TQNISIPADMV 288
Query: 414 DAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAE 471
+IG G+ IS IR+SSGA ++I + GE I+G + + A L+ +N AE
Sbjct: 289 GCIIGRGGSKISEIRKSSGARISIAKAPHDETGERMFTITGGPAANEKALYLLYENLEAE 348
Query: 472 AAAPSQ 477
SQ
Sbjct: 349 KMRRSQ 354
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 141/343 (41%), Gaps = 43/343 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG---------- 73
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ + I + S G GK + +L+VPASQ GSLIGK G +K I+
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + C ++V +E LP + +A+ L GS + + + I +
Sbjct: 134 QTTGCSIQV-ASEMLP----------------NSTERAVTLSGSAEQ---ITQCIYQICL 173
Query: 309 MHMQMP--NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
+ ++ P + + P PQ GP + + G + Y P ++ +
Sbjct: 174 VMLESPPRGATIPYRPKPQVTGP---VILANGQAFTIQGNYAVPTQEVAKNPLASLAALG 230
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
+ A + GS + + Q +M + +IG G I+
Sbjct: 231 LAGMTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKIAE 290
Query: 427 IRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IR+ SGA + I +E G + T+ ISG V AQ LI
Sbjct: 291 IRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLIN 333
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 155/348 (44%), Gaps = 40/348 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+ P ++
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDAI-- 68
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + + +++ +++P+ + V+ +L+VPASQ GSLIGK G +K I+E++
Sbjct: 69 -FKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIP------ 305
V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 128 GAQVQVAG-DMLPN---STERAVTISGMPDAIIQCVKQICVVMLESPPKGATIPYRPKPA 183
Query: 306 ----LFEMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQ-AESYYP 359
+F IP P + + +PQ P Q E+ +
Sbjct: 184 SAPVIFAGGQAYTIQGQCAIPHPDDACLLSAEYKTALTSTLWRSPQLAHPSSQLKEAAWR 243
Query: 360 PADLPPPME-KQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
P L ME K ++ +G +A N Q++ +T IP +IG
Sbjct: 244 PESLRGKMELKNCNEESENWGMDA--------NPQASTHELT-------IPNDLIGCIIG 288
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G I+ IR+ SGA + I E + I+G+ + + AQ LI
Sbjct: 289 RQGTKINEIRQMSGAQIKIANATEGSTERQITITGSPANISLAQYLIN 336
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G+TER + I+
Sbjct: 269 PQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITIT 322
>gi|340521021|gb|EGR51256.1| predicted protein [Trichoderma reesei QM6a]
Length = 475
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 40/348 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + I + + A+ + D G ER + +S
Sbjct: 121 IRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSG---------- 170
Query: 192 AMDGLLRVHKRIVDGLDSD-SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ + A + + +LL+P GS+IGK G ++ IQEA
Sbjct: 171 IVDAVAKAFGLIIRTLNNEPLTEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEA 230
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D + +R + V+G A VH A +GS L + L +R P +
Sbjct: 231 SGA---RLNASD-SCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAY 286
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN--------PQYMPPPRQAES--YYPP 360
+ IP P P SG G N P +MPP + + P
Sbjct: 287 ATRSGAPVGSIPGGMQVVPYSPQPASGHYGRAENYGRHQERRPHHMPPAPYPQPYAHGAP 346
Query: 361 ADLPP-PMEKQPHQGISAYGREAPV-----------NVHGSSNAQSTPSMITQ--VTQQM 406
P PM+ Q +AYG AP HG+ Q + + +TQQ+
Sbjct: 347 HGTPAMPMQYGAGQP-AAYGAAAPHVQPHMAPHTGPQAHGAPQGQPMHAGMPGGPITQQI 405
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
IP A+IG G I+ IR+ SG+ + I E + E V I+GT
Sbjct: 406 YIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGT 453
>gi|121710178|ref|XP_001272705.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119400855|gb|EAW11279.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 464
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 153/366 (41%), Gaps = 44/366 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ +Q+ ++IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 114 IRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQ-------- 165
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 166 --DAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEA 223
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 224 SGA---RLNASDA-CLPLSTERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAY 279
Query: 311 --------------MQM----PNPQMDHIPPPQSWG-----PPQGLPPSGGPGYGHNPQY 347
MQ+ P P P+++ P + + G Y H
Sbjct: 280 ATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPETFKRHHPHPNRAAAGAYGVPYLHGQPA 339
Query: 348 MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPS---MITQ-VT 403
P Q +Y P PHQ + YG P G+ +TP+ M Q +T
Sbjct: 340 PAPVAQPALHYGATPHTPYAGAGPHQ-PAPYGAPQPAQSRGAPTP-ATPAGGVMPGQPLT 397
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
QQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q A
Sbjct: 398 QQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALY 457
Query: 464 LIQNFM 469
++ + +
Sbjct: 458 MLYSRL 463
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP---GTTERAVMISAKEEPES 187
++R+L P + GS+IG+ GE +K++ ++ A+IK+ PP ER + I A++ +
Sbjct: 266 LYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKV--EPPVDSTIAERVIAIEAQDVDDP 323
Query: 188 SL-PPAMDGLLRVHKRIV-DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
++ P+ LLR+ + IV D + + A G + +LL+P+SQ ++IG+ G ++
Sbjct: 324 TVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGHIVIRLLLPSSQIRNVIGRFGNVIE 383
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDA-SGVHKAMELIGSHLR 295
I+ S VRVL + + P A ++D V+++ ++ V A+ +I + LR
Sbjct: 384 RIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLR 434
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 141/344 (40%), Gaps = 63/344 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D ++ S + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI----------------C 163
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQYMPPPRQAESYYPPA--D 362
+ ++ P P+ IP + P P +GG Y QY P + A
Sbjct: 164 VVMLESP-PKGATIP----YRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQ 218
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
P P Q P + H ++ IP +IG G
Sbjct: 219 TPFPPLGQTTPAFPGLDASPPASTH-----------------ELTIPNDLIGCIIGRQGT 261
Query: 423 SISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 262 KINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 305
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGW---PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G T +PG P S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 224 LGQTTPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 283
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 284 SERQITIT 291
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 174/382 (45%), Gaps = 50/382 (13%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
STE+K VF+++ + G IIG++G I+ + ET A I + + ER V
Sbjct: 272 STERK-------VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVV 324
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVSTKLLVPASQAGSL 236
+SA+E ES A + L V R V+ +D + P G V TKLLVP+ A S
Sbjct: 325 TVSARENLESRYSHAQNALALVFARSVE-IDVEKGLRPGLHNGAIVKTKLLVPSHFANSF 383
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
G G ++I A+ V + + + +++ V+E+ G+ S V KA+ + S LR+
Sbjct: 384 NGN--GNREAII-ATGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRE 440
Query: 297 FLVDRSIIPLFEMHMQMPNP--------QMDHIPPPQ---SWG---------PPQGLPPS 336
L+ + + L EM ++ NP Q+ ++ P Q S G P + S
Sbjct: 441 NLLPKKV--LGEMRARVSNPYESAGGRSQIYNLQPSQQDASRGDSLSVSAAVPDLKMVRS 498
Query: 337 GGPGYGHN----PQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNA 392
G N + + + + P L +E+ QG+ ++ ++ +G ++
Sbjct: 499 GAEVLKSNSVMHTEVLKEVDELNDFTLPQSL---LEEDLTQGM----KQLQMSSNGDVSS 551
Query: 393 ---QSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTV 449
+S + ++T ++ + ++ G G + +++ SGA V +++ G E TV
Sbjct: 552 LPPRSKGVSVRKITLELAVEKDALGSLYGRDGTGVDNLQQISGANVDVKDPTGT--EATV 609
Query: 450 EISGTASQVQTAQQLIQNFMAE 471
ISG Q +TA LI++ + +
Sbjct: 610 LISGNPEQARTAMSLIESILTD 631
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 140/373 (37%), Gaps = 67/373 (17%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P E+ R++ A +G IIG G + K+ ET +I G+ V I
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 187 SSL----------------------PPAMDGLLRVHKRIVDGLDS-DSSHAPSGTGGKVS 223
S+ A L+RV +R L + D G +
Sbjct: 82 QSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAY 141
Query: 224 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGV 283
+L +Q G+++G G V+ ++ S ++RVL P+ ++D ++++ GD V
Sbjct: 142 CGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVLAV 198
Query: 284 HKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGH 343
KA+ ++ S+++ N ++ PPP S + L G H
Sbjct: 199 KKALVMVSSYIQN------------------NAPLNGYPPPLSIKGYESLSTDGNSEDPH 240
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT 403
+ ++ P R + S ++ P+ G ++ R+ + + T V
Sbjct: 241 S-EFFPNLRSS-SLSNATEIVASNRHLPYDGGNSTERKVVFKI-----------IFTSVV 287
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
A +IG G I ++ +GA++++ V GE V +S +++
Sbjct: 288 ---------AGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSAR-ENLESRYS 337
Query: 464 LIQNFMAEAAAPS 476
QN +A A S
Sbjct: 338 HAQNALALVFARS 350
>gi|421098457|ref|ZP_15559126.1| sphingomyelin phosphodiesterase [Leptospira borgpetersenii str.
200901122]
gi|410798420|gb|EKS00511.1| sphingomyelin phosphodiesterase [Leptospira borgpetersenii str.
200901122]
Length = 614
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 20 IPENQEVENQVPGYEVPEYEVPE--VPQEQVPQEQVPESQVTKEQVTEDQLTEDQVPEDH 77
IPEN EN +P +PE + E +P+ +P+ + E +++ + ED ++E+ +PE+
Sbjct: 53 IPENSISENSIPANSIPENSISENSIPENSIPENSILEDSISENSILEDSISENSIPENS 112
Query: 78 VPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGW--PGESVFRML 135
+ ED + E+ +PE+ +PE+ +PE+S L+ + ++ V K PGW G+S
Sbjct: 113 ILEDSISENSIPENSIPENSIPENSILENVEIKILSHNVFLLPKALPGWGSWGQS----- 167
Query: 136 VPAQKV--GSIIGRKGEFIKKIVEETRARIKILDG 168
A+++ S I + + +T AR +LDG
Sbjct: 168 TRAERIVSSSYIRNQDVIVFDEAFDTNARKVLLDG 202
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 43 VPQEQVPQEQVPESQVTKEQVTEDQLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDS 102
+P+ + + +P + + + ++E+ + + +PE+ + E+ +PE+ +PE+ + ED + E+S
Sbjct: 38 IPENSISENSIPANSIPENSISENSIPANSIPENSISENSIPENSIPENSILEDSISENS 97
Query: 103 QLQEK-QENEV 112
L++ EN +
Sbjct: 98 ILEDSISENSI 108
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 125/307 (40%), Gaps = 57/307 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E+A+ I PE+
Sbjct: 67 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYG--NPENCTM 124
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
K+I++ + + A S G++ K+L + G +IGK G T+K I +
Sbjct: 125 AC--------KKILEVMQQE---ANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 173
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + V D+ F L +R++ V G + K I + LR+ +E
Sbjct: 174 TDTKITVSSINDISSFNL--ERIITVKGSIENMSKGESQISAKLRQS---------YEND 222
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
+Q PQ P P + + G G G + A P
Sbjct: 223 LQALAPQTIMFPGLH----PMAMMSTAGNGMGFTGRTAGATASASGSGATGMYP------ 272
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
G P+ V Q T + IP + A+IGT G I I R
Sbjct: 273 --------GSNFPIEV--------------QETTYLYIPNNAVGAIIGTKGLHIRNIIRF 310
Query: 431 SGATVTI 437
SGA+V I
Sbjct: 311 SGASVKI 317
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGP-PGTTERAVMISAKEEPESS 188
+ +P VG+IIG KG I+ I+ + A +KI D P TER V I E +
Sbjct: 286 LYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTPEAQWK 345
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ +R + V G D +++ ++ VP++Q G +IGK G V+ +Q
Sbjct: 346 AQYLIFEKMR-EEGFVSGTDDV----------RLTVEIFVPSAQVGRIIGKGGQNVRELQ 394
Query: 249 EASNCIVRV 257
+ I+++
Sbjct: 395 RVTGSIIKL 403
>gi|302926012|ref|XP_003054209.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
gi|256735150|gb|EEU48496.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
Length = 472
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 146/373 (39%), Gaps = 55/373 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + I + + AR + D G ER + +S
Sbjct: 114 IRAVISSPEAATVIGKGGENVSNIRKLSNARCTVSDYQKGAVERILTVSG---------- 163
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ + S + K +LL+P GS+IGK G ++ IQEA
Sbjct: 164 IVDAVAKAFGLIIRTLNNEPLNESSTSSSKTYPLRLLIPHILIGSIIGKGGARIREIQEA 223
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D + +R + V+G A VH A +GS L + L DR P +
Sbjct: 224 SGA---RLNASDA-CLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAY 279
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQ---------AESYYPPA 361
IP P P SG G G N R + + A
Sbjct: 280 ATRSGAPAGSIPGGMQVVPYCPQPASGHYGRGENYARHNDRRSHHMPPAPYPQQYPHAAA 339
Query: 362 DLPPPMEKQ---------------------PHQGISAYGREAPVNVHGSSNAQSTPSMIT 400
P M PH G A+G G+ AQ + I
Sbjct: 340 QANPAMPMHYGGAQGGGAYGAAPHVQPHMPPHAGPQAHG--------GAPQAQPMGAAIP 391
Query: 401 Q--VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQV 458
+TQQ+ IP A+IG G I+ IR+ S + + I E + E V I+GT
Sbjct: 392 GGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQDNSNERLVTITGTEECN 451
Query: 459 QTAQQLIQNFMAE 471
+ A ++ + + E
Sbjct: 452 RMALYMLYSRLGE 464
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 146/346 (42%), Gaps = 75/346 (21%)
Query: 101 DSQLQEKQENEVNLAVGSTEKKWPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKI 155
D + Q N+ N +PG PG + R+LV ++ VG+IIGR+G I+ I
Sbjct: 59 DKNQRRSQRNQRN--------TYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 110
Query: 156 VEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHA 214
+++RAR+ + G+ E+++ I PE+ KRI++ + + A
Sbjct: 111 TQQSRARVDVHRKENVGSLEKSITIYGN--PENCTNAC--------KRILEVMQQE---A 157
Query: 215 PSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVV 274
S G++ K+L + G +IGK G T+K I + ++ + V D+ F L +R++
Sbjct: 158 LSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERII 215
Query: 275 EVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLP 334
V G + +A I + LR+ +E +Q PQ P P +
Sbjct: 216 TVKGLIENMSRAENQISTKLRQS---------YENDLQAMAPQSLMFPGLH----PMAMM 262
Query: 335 PSGGPGYGHNPQYMPPPRQAESY---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSN 391
+ G G N MP P +S+ PA + PP+ P ++
Sbjct: 263 STPGNGMVFNTS-MPFP-SCQSFAMSKTPASVVPPV--------------FPNDL----- 301
Query: 392 AQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI 437
Q T + IP + A+IGT G+ I I R S A++ I
Sbjct: 302 ---------QETTYLYIPNNAVGAIIGTKGSHIRSIMRFSNASLKI 338
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAVMISAKEEPESS 188
+ +P VG+IIG KG I+ I+ + A +KI LD TER V I E
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPE---- 362
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSLIGKQGGTVKSI 247
G + I + + + GT +++ +LLV +SQ G +IGK G V+ +
Sbjct: 363 ------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRIIGKGGQNVREL 414
Query: 248 QEASNCIVRV 257
Q + ++++
Sbjct: 415 QRVTGSVIKL 424
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 67/324 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 66 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 125
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ KRI++ + + A S G++ K+L + G +
Sbjct: 126 ITIYG--NPENCTNAC--------KRILEVMQQE---AISTNKGEICLKILAHNNLIGRI 172
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + +A I + LR+
Sbjct: 173 IGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQ 230
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + G G N MP P +S
Sbjct: 231 S---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP-SCQS 275
Query: 357 Y---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+ PA + PP+ P ++ Q T + IP +
Sbjct: 276 FAMSKTPASVVPPV--------------FPNDL--------------QETTYLYIPNNAV 307
Query: 414 DAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R S A++ I
Sbjct: 308 GAIIGTKGSHIRSIMRFSNASLKI 331
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAV 177
+P E+ + + +P VG+IIG KG I+ I+ + A +KI LD TER V
Sbjct: 290 FPNDLQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKV 348
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSL 236
I E G + I + + + GT +++ +LLV +SQ G +
Sbjct: 349 TIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRI 396
Query: 237 IGKQGGTVKSIQEASNCIVRV 257
IGK G V+ +Q + ++++
Sbjct: 397 IGKGGQNVRELQRVTGSVIKL 417
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 142/341 (41%), Gaps = 42/341 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG---------- 73
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + I + + G ++ +L+VPASQ GSLIGK G +K I++ +
Sbjct: 74 TTNAIFSAFTLITKKFEEFNDVGKVGKT-QIPIRLIVPASQCGSLIGKSGSKIKEIRQTT 132
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
C ++V +E LP + +A+ L GS + + + I + + +
Sbjct: 133 GCSIQV-ASEMLP----------------NSTERAVTLSGSAEQ---ITQCIYQICLVML 172
Query: 312 QMP--NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEK 369
+ P + + P PQ GP + + G + Y P ++ + +
Sbjct: 173 ESPPRGATIPYRPKPQVTGP---VILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAG 229
Query: 370 QPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQ-QMQIPLSYADAVIGTAGASISYIR 428
A + GS + P+ Q Q +M + +IG G I+ IR
Sbjct: 230 MNPASTGGINHTALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIR 289
Query: 429 RSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+ SGA + I +E G + T+ ISG V AQ LI
Sbjct: 290 QISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLIN 330
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 145/342 (42%), Gaps = 41/342 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S S++
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSGTT---SAIFA 80
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQE 249
A + + + + S G GK + +L+VPASQ GSLIGK G +K I++
Sbjct: 81 AFTLITKKFE------EWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
+ C ++V +E LP + +A+ L GS + + + I + +
Sbjct: 135 NTGCSIQV-ASEMLP----------------NSTERAVTLSGSAEQ---ITQCIYQICLV 174
Query: 310 HMQMP--NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
++ P + + P PQ GP + + G + Y P ++ + +
Sbjct: 175 MLESPPRGATIPYRPKPQVTGP---VILANGQAFTIQGNYAVPTQEVSKNPLASLAALGL 231
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYI 427
A + GS + + Q +M + +IG G I+ I
Sbjct: 232 AGMTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEI 291
Query: 428 RRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
R+ SGA + I +E G + T+ ISG V AQ LI
Sbjct: 292 RQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLIN 333
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 137/324 (42%), Gaps = 67/324 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 131 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 190
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I E KRI++ + + A S G++ K+L + G +
Sbjct: 191 ITIYGNPE----------NCTNACKRILEVMQQE---ALSTNKGEICLKILAHNNLIGRI 237
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + +A I + LR+
Sbjct: 238 IGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQ 295
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + G G N MP P +S
Sbjct: 296 S---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP-SCQS 340
Query: 357 Y---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+ PA + PP A+ + Q T + IP +
Sbjct: 341 FAMSKTPASVVPP----------AFPND------------------MQETTYLYIPNNAV 372
Query: 414 DAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R S A++ I
Sbjct: 373 GAIIGTKGSHIRSIMRFSSASLKI 396
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 124 PGWPG---ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTER 175
P +P E+ + + +P VG+IIG KG I+ I+ + A +KI LD TER
Sbjct: 353 PAFPNDMQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTER 411
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAG 234
V I E G + I + + + GT +++ +LLV +SQ G
Sbjct: 412 KVTIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVG 459
Query: 235 SLIGKQGGTVKSIQEASNCIVRV 257
+IGK G V+ +Q + ++++
Sbjct: 460 RIIGKGGQNVRELQRVTGSVIKL 482
>gi|378731796|gb|EHY58255.1| hypothetical protein HMPREF1120_06267 [Exophiala dermatitidis
NIH/UT8656]
Length = 492
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 153/369 (41%), Gaps = 50/369 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I + + A+ + D G ER + +S +E S
Sbjct: 136 IRAVISSAEAATCIGKGGENVTQIRKLSGAKCTVSDYSRGAVERILTVSGSQEAVS---- 191
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+ I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 192 ------KAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEA 245
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A VH A + L + L +R P +
Sbjct: 246 SGA---RLNASD-SCLPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 301
Query: 311 MQMPNPQMDHIPPPQSWGP--PQGLPPSGGPGYGHNPQY-----MPPPRQ-AESYYPP-- 360
IP P PQ P+GG YGH Y +PP R A+ Y P
Sbjct: 302 ATRSGGPAGVIPGGMQVVPYVPQ---PAGG-QYGHPDTYKRHNTLPPQRAPAQPYGAPQV 357
Query: 361 -----------ADLPPPMEKQPHQGISA------YGR--EAPVNVHGSSNAQSTPSMITQ 401
+ P G + YG+ PV HG AQ M Q
Sbjct: 358 HGAAPQPYAPYPQPYAATPRTPSYGAAVPQPAGPYGQVPPQPVVPHGQP-AQPAHGMPGQ 416
Query: 402 -VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQT 460
+TQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q
Sbjct: 417 PITQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQM 476
Query: 461 AQQLIQNFM 469
A ++ + +
Sbjct: 477 ALYMLYSRL 485
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 146/348 (41%), Gaps = 49/348 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S
Sbjct: 25 TIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG--------- 73
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I + S G GK + +L+VPASQ GSLIGK G +K I
Sbjct: 74 -TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
++ + C ++V +E LP + +A+ L GS + + + I +
Sbjct: 133 RQTTGCSIQV-ASEMLP----------------NSTERAVTLSGSAEQ---ITQCIYQIC 172
Query: 308 EMHMQMP--NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE---SYYPPAD 362
+ ++ P + + P PQ GP + + G + Y P ++ A
Sbjct: 173 LVMLESPPRGATIPYRPKPQVTGP---VILANGQAFTIQGNYAVPTQEVAKNPLASLAAL 229
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQ-QMQIPLSYADAVIGTAG 421
M GI+ A + GS + P+ Q Q +M + +IG G
Sbjct: 230 GLAGMNPASTGGINHTAALAA--LAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGG 287
Query: 422 ASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
I+ IR+ SGA + I +E G + T+ ISG V AQ LI
Sbjct: 288 TKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLIN 335
>gi|322708646|gb|EFZ00223.1| hypothetical protein MAA_04000 [Metarhizium anisopliae ARSEF 23]
Length = 456
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 158/414 (38%), Gaps = 96/414 (23%)
Query: 102 SQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRA 161
S + N A E W R ++ + + +IIG+ GE + I + + A
Sbjct: 86 SNATASSDTAANSAAAHDETSW------IHIRAVISSPEAATIIGKGGENVSNIRKMSNA 139
Query: 162 RIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK 221
+ + D G ER + +S GL I+ L+++ P G
Sbjct: 140 KCTVSDYQKGAVERILTVSG----------IAFGL------IIRTLNNE----PLGEAST 179
Query: 222 VSTK-----LLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
S+K LL+P GS+IGK G ++ IQEAS L A D + +R + V
Sbjct: 180 ASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA---RLNASD-SCLPMSSERSLVV 235
Query: 277 VGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH--------------MQM----PNPQM 318
+G A VH A +GS L + L +R P + MQ+ P P
Sbjct: 236 MGVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSGAPAGSIPGGMQVVPYSPQPAS 295
Query: 319 DHIPPPQSWG----------PPQGLPPSGGPGYGHNPQYMPPPR---------QAESY-- 357
H P+++G PP PP H P PP Q +Y
Sbjct: 296 GHYGRPENYGRHQDRRAHHMPPATYPP-------HYPHNAAPPNPAMPMQYGGQQAAYGG 348
Query: 358 --YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
+ +PP + QPH G + P HG +TQQ+ IP A
Sbjct: 349 APHATQHMPPHVGPQPHGG-----PQGPPMQHGMPGGP--------LTQQIFIPNDMVGA 395
Query: 416 VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
+IG G I+ IR+ SG+ + I E + E V I+GT + A ++ + +
Sbjct: 396 IIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYMLYSRL 449
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 67/324 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 66 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 125
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ KRI++ + + A S G++ K+L + G +
Sbjct: 126 ITIYG--NPENCTNAC--------KRILEVMQQE---AISTNKGEICLKILAHNNLIGRI 172
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + +A I + LR+
Sbjct: 173 IGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQ 230
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + G G N MP P +S
Sbjct: 231 S---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP-SCQS 275
Query: 357 Y---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+ PA + PP+ P ++ Q T + IP +
Sbjct: 276 FAMSKTPASVVPPV--------------FPNDL--------------QETTYLYIPNNAV 307
Query: 414 DAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R S A++ I
Sbjct: 308 GAIIGTRGSHIRSIMRFSNASLKI 331
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAV 177
+P E+ + + +P VG+IIG +G I+ I+ + A +KI LD TER V
Sbjct: 290 FPNDLQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKV 348
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSL 236
I E G + I + + + GT +++ +LLV +SQ G +
Sbjct: 349 TIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRI 396
Query: 237 IGKQGGTVKSIQEASNCIVRV 257
IGK G V+ +Q + ++++
Sbjct: 397 IGKGGQNVRELQRVTGSVIKL 417
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 67/324 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 67 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 126
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ KRI++ + + A S G++ K+L + G +
Sbjct: 127 ITIYG--NPENCTNAC--------KRILEVMQQE---ALSTNKGEICLKILAHNNLIGRI 173
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + +A I + LR+
Sbjct: 174 IGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQ 231
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + G G N MP P +S
Sbjct: 232 S---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP-SCQS 276
Query: 357 Y---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+ PA + PP+ P ++ Q T + IP +
Sbjct: 277 FAMSKTPASVVPPV--------------FPNDL--------------QETTYLYIPNNAV 308
Query: 414 DAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R S A++ I
Sbjct: 309 GAIIGTKGSHIRSIMRFSNASLKI 332
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAV 177
+P E+ + + +P VG+IIG KG I+ I+ + A +KI LD TER V
Sbjct: 291 FPNDLQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKV 349
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSL 236
I E G + I + + + GT +++ +LLV +SQ G +
Sbjct: 350 TIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRI 397
Query: 237 IGKQGGTVKSIQEASNCIVRV 257
IGK G V+ +Q + ++++
Sbjct: 398 IGKGGQNVRELQRVTGSVIKL 418
>gi|119193374|ref|XP_001247293.1| hypothetical protein CIMG_01064 [Coccidioides immitis RS]
gi|303312121|ref|XP_003066072.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105734|gb|EER23927.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320040053|gb|EFW21987.1| KH domain RNA binding protein [Coccidioides posadasii str.
Silveira]
gi|392863461|gb|EAS35786.2| KH domain RNA binding protein [Coccidioides immitis RS]
Length = 489
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 149/363 (41%), Gaps = 40/363 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 135 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTVSGPQ-------- 186
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ +PS K +LL+P GS+IGK G ++ IQE
Sbjct: 187 --DAVAKAFGLIIRTLNNEPLDSPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEH 244
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + + L + L +R P +
Sbjct: 245 SGA---RLNASD-SCLPLSTERSLVILGVADAVHIATYYVAATLVEQLTERFGGPAASAY 300
Query: 311 --------------MQM----PNPQMDHIPPPQSWG---PPQGLPPSGGPG--YGHNPQY 347
MQ+ P P P S+ P S G G Y H P
Sbjct: 301 ATRSGGPAGVVPGGMQVVPYVPQPAGGQYGHPDSFKRHHPQANRAMSTGYGVPYMHGPGP 360
Query: 348 MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGS-SNAQSTPSMITQVTQQM 406
P Q +Y + PHQ + YG P + HG+ + P +TQQ+
Sbjct: 361 SPHGMQQPIHYNASPRQGYTGAGPHQ-PAPYGAPQPPHSHGTPAQPMGAPVAGGPLTQQI 419
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP A+IG GA I+ IR SG+ + I E + E V I+GT Q A ++
Sbjct: 420 FIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQMALYMLY 479
Query: 467 NFM 469
+ +
Sbjct: 480 SRL 482
>gi|365761950|gb|EHN03570.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 140/365 (38%), Gaps = 52/365 (14%)
Query: 125 GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
P RML + I+G KG I +I ET ARI + + G ER + +
Sbjct: 65 NLPSHVHLRMLCLVKHASLIVGHKGATISRIKSETSARINVSNNIRGVPERIIYVRG--- 121
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
D + + + IV L + + +VS LL+P G +IGK+G +
Sbjct: 122 -------TCDDVAKAYGMIVRALLEEHENESEEEDIEVSINLLIPHHLMGCIIGKRGSRL 174
Query: 245 KSIQEASNCIVRVLGAEDLPV----FALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
+ I++ L A L L +DR++ + G +H A +G L F ++
Sbjct: 175 REIED--------LSAAKLFASPNQLLLSNDRILTISGVPDAIHIATFYVGQTLLNFQIE 226
Query: 301 -------RSIIPLFEMHMQMPNPQMDHIPP-------PQSWGPPQGL---PPSGGPGYGH 343
RSI F Q + +DH + P L P+
Sbjct: 227 SPQKKLKRSI---FYQPTQFNSVLLDHSQSNAVLHQRNHQYHPNDKLLSCRPNRKFSVSS 283
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGI-SAYGREAPVNVHGSSNAQSTPSMITQV 402
M PP+ Y A + P+ I + +APV G SN S +
Sbjct: 284 TLLSMAPPQ-----YTTASVANATAFHPNFVIPNVRILDAPVIDQGPSNHLS----MNLF 334
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
Q++ I ++ VIG G I+ ++ S+G ++ +Q++ E + I GT Q A
Sbjct: 335 QQEIFIDENFVGNVIGKDGKHINSVKESTGCSIIVQDSAEGSSERRLSIRGTFMASQAAI 394
Query: 463 QLIQN 467
LI N
Sbjct: 395 MLISN 399
>gi|322780737|gb|EFZ09994.1| hypothetical protein SINV_05815 [Solenopsis invicta]
Length = 483
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 32/184 (17%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMI 179
+ G G ++LVP G+IIG+ G+ I ++ ++T AR+K+ D PGTTER +I
Sbjct: 7 FVGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLI 66
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGL------------DSDSSHAPSGTGGKVSTKLL 227
+ +D ++ V + I+D + D DS A + +V K+L
Sbjct: 67 TG----------TVDAIMEVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQV--KIL 114
Query: 228 VPASQAGSLIGKQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHKA 286
VP S AG +IGK G +K I+E S V++ A+DL + +R + V+G+ H+A
Sbjct: 115 VPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSL----QERCITVIGEKENNHRA 170
Query: 287 MELI 290
+ +I
Sbjct: 171 LHMI 174
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 67/324 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 73 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 132
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ KRI++ + + A S G++ K+L + G +
Sbjct: 133 ITIYG--NPENCTNAC--------KRILEVMQQE---AISTNKGEICLKILAHNNLIGRI 179
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + +A I + LR+
Sbjct: 180 IGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQ 237
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + G G N MP P +S
Sbjct: 238 S---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP-SCQS 282
Query: 357 Y---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+ PA + PP+ P ++ Q T + IP +
Sbjct: 283 FAMSKTPASVVPPV--------------FPNDL--------------QETTYLYIPNNAV 314
Query: 414 DAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R S A++ I
Sbjct: 315 GAIIGTRGSHIRSIMRFSNASLKI 338
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAV 177
+P E+ + + +P VG+IIG +G I+ I+ + A +KI LD TER V
Sbjct: 297 FPNDLQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKV 355
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSL 236
I E G + I + + + GT +++ +LLV +SQ G +
Sbjct: 356 TIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRI 403
Query: 237 IGKQGGTVKSIQEASNCIVRV 257
IGK G V+ +Q + ++++
Sbjct: 404 IGKGGQNVRELQRVTGSVIKL 424
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 67/324 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 67 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 126
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ KRI++ + + A S G++ K+L + G +
Sbjct: 127 ITIYG--NPENCTNAC--------KRILEVMQQE---ALSTNKGEICLKILAHNNLIGRI 173
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + +A I + LR+
Sbjct: 174 IGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQ 231
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + G G N MP P +S
Sbjct: 232 S---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP-SCQS 276
Query: 357 Y---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+ PA + PP+ P ++ Q T + IP +
Sbjct: 277 FAMSKTPASVVPPV--------------FPNDL--------------QETTYLYIPNNAV 308
Query: 414 DAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R S A++ I
Sbjct: 309 GAIIGTKGSHIRSIMRFSNASLKI 332
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAVMISAKEEPESS 188
+ +P VG+IIG KG I+ I+ + A +KI LD TER V I E
Sbjct: 301 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPE---- 356
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSLIGKQGGTVKSI 247
G + I + + + GT +++ +LLV +SQ G +IGK G V+ +
Sbjct: 357 ------GQWKAQFMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRIIGKGGQNVREL 408
Query: 248 QEASNCIVRV 257
Q + ++++
Sbjct: 409 QRVTGSVIKL 418
>gi|346979418|gb|EGY22870.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 477
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 141/359 (39%), Gaps = 56/359 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + I + + A+ + D G ER + +S
Sbjct: 117 IRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSG---------- 166
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + I+ L+++ PS K +LL+P GS+IGK G ++ IQEA
Sbjct: 167 VVDASAKAFGLIIRTLNNEPLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEA 226
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D + +R + V+G A VH A +GS L + L DR P +
Sbjct: 227 SGA---RLNASD-SCLPMSTERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAY 282
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPG-----------YGHNPQ--YMPPPRQAESY 357
+P P P +G G G +PQ +MPP + Y
Sbjct: 283 ATRSGGPAGVVPGGMQVVPYCPQPTTGNYGNRENFGRRHDARGQHPQQHHMPPAPYGQQY 342
Query: 358 YPPADLPPPM---------------EKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ- 401
P P P QPH G +A HG AQ
Sbjct: 343 PPHGAQPGPAIPQQYGAQAGGYGGAPMQPHGGPAA------PQPHGGHPAQPMHGGPAGG 396
Query: 402 ------VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGT 454
+TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V I+GT
Sbjct: 397 GMAGQPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGT 455
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 144/343 (41%), Gaps = 42/343 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S +
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG------TTSA 77
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQE 249
+ K+ + S G GK + +L+VPASQ GSLIGK G +K I++
Sbjct: 78 IFSAFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
+ C ++V +E LP + +A+ L GS + + + I + +
Sbjct: 135 TTGCSIQV-ASEMLP----------------NSTERAVTLSGSAEQ---ITQCIYQICLV 174
Query: 310 HMQMP--NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQ-AESYYPPADLPPP 366
++ P + + P PQ GP + + G + Y P ++ A++
Sbjct: 175 MLESPPRGATIPYRPKPQVTGP---VILANGQAFTIQGNYAVPTQEVAKNPLASLAALGL 231
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
P A + GS + + Q +M + +IG G I+
Sbjct: 232 AGMNPASTGGINHTAALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKIAE 291
Query: 427 IRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IR+ SGA + I +E G + T+ ISG V AQ LI
Sbjct: 292 IRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLIN 334
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 145/345 (42%), Gaps = 45/345 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG---------- 73
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ + I + S G GK + +L+VPASQ GSLIGK G +K I+
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + C ++V +E LP + +A+ L GS + + + I +
Sbjct: 134 QTTGCSIQV-ASEMLP----------------NSTERAVTLSGSAEQ---ITQCIYQICL 173
Query: 309 MHMQMP--NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQ-AESYYPPADLPP 365
+ ++ P + + P PQ GP + + G + Y P ++ A++
Sbjct: 174 VMLESPPRGATIPYRPKPQVTGP---VILANGQAFTIQGNYAVPTQEVAKNPLASLAALG 230
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQ-QMQIPLSYADAVIGTAGASI 424
P A + GS + P+ Q Q +M + +IG G I
Sbjct: 231 LAGMNPASTGGINHTAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKI 290
Query: 425 SYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
+ IR+ SGA + I +E G + T+ ISG V AQ LI
Sbjct: 291 AEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLIN 335
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 67/324 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 73 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSVEKS 132
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I PE+ KRI++ + + A S G++ K+L + G +
Sbjct: 133 ITIYG--NPENCTNAC--------KRILEVMQQE---ALSTNKGEICLKILAHNNLIGRI 179
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + +A I + LR+
Sbjct: 180 IGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQ 237
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + G G N MP P +S
Sbjct: 238 S---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP-SCQS 282
Query: 357 Y---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+ PA + PP+ P ++ Q T + IP +
Sbjct: 283 FAMSKTPASVVPPV--------------FPNDL--------------QETTFLYIPNNAV 314
Query: 414 DAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R S A++ I
Sbjct: 315 GAIIGTKGSHIRSIMRFSNASLKI 338
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAV 177
+P E+ F + +P VG+IIG KG I+ I+ + A +KI LD TER V
Sbjct: 297 FPNDLQETTF-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKV 355
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSL 236
I E G + I + + + GT +++ +LLV +SQ G +
Sbjct: 356 TIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRI 403
Query: 237 IGKQGGTVKSIQEASNCIVRV 257
IGK G V+ +Q + ++++
Sbjct: 404 IGKGGQNVRELQRVTGSVIKL 424
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 47/347 (13%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S +++
Sbjct: 25 TIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG---TTNAIF 79
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A + + + D + P +L+VPASQ GSLIGK G +K I++
Sbjct: 80 SAFTLITKKFEEFNDVGKVGKTQIP--------IRLIVPASQCGSLIGKSGSKIKEIRQT 131
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ C ++V +E LP + +A+ L GS + + + I + +
Sbjct: 132 TGCSIQV-ASEMLP----------------NSTERAVTLSGSAEQ---ITQCIYQICLVM 171
Query: 311 MQMP--NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE---SYYPPADLPP 365
++ P + + P PQ GP + + G + Y P ++ A
Sbjct: 172 LESPPRGATIPYRPKPQVTGP---VILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLA 228
Query: 366 PMEKQPHQGISAYGR--EAPVNVHGSSNAQSTPSMITQVTQ-QMQIPLSYADAVIGTAGA 422
M GI+ G A + GS + P+ Q Q +M + +IG G
Sbjct: 229 GMNPASTGGINHTGSAPAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGT 288
Query: 423 SISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
I+ IR+ SGA + I +E G + T+ ISG V AQ LI
Sbjct: 289 KIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLIN 335
>gi|401838485|gb|EJT42099.1| PBP2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 416
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 140/365 (38%), Gaps = 52/365 (14%)
Query: 125 GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
P RML + I+G KG I +I ET ARI + + G ER + +
Sbjct: 65 NLPSHVHLRMLCLVKHASLIVGHKGATISRIKSETSARINVSNNIRGVPERIIYVRG--- 121
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
D + + + IV L + + +VS LL+P G +IGK+G +
Sbjct: 122 -------TCDDVAKAYGMIVRALLEEHENESEEEDIEVSINLLIPHHLMGCIIGKRGSRL 174
Query: 245 KSIQEASNCIVRVLGAEDLPV----FALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
+ I++ L A L L +DR++ + G +H A +G L F ++
Sbjct: 175 REIED--------LSAAKLFASPNQLLLSNDRILTINGVPDAIHIATFYVGQTLLNFQIE 226
Query: 301 -------RSIIPLFEMHMQMPNPQMDHIPP-------PQSWGPPQGL---PPSGGPGYGH 343
RSI F Q + +DH + P L P+
Sbjct: 227 SPQKKLKRSI---FYQPTQFNSVLLDHSQSNAVLHQRNHQYHPNDKLLSCRPNRKFSVSS 283
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGI-SAYGREAPVNVHGSSNAQSTPSMITQV 402
M PP+ Y A + P+ I + +APV G SN S +
Sbjct: 284 TLLSMAPPQ-----YTTASVANATAFHPNFVIPNVRILDAPVIDQGPSNHLS----MNLF 334
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
Q++ I ++ VIG G I+ ++ S+G ++ +Q++ E + I GT Q A
Sbjct: 335 QQEIFIDENFVGNVIGKDGKHINSVKESTGCSIIVQDSVEGSSERRLSIRGTFMASQAAI 394
Query: 463 QLIQN 467
LI N
Sbjct: 395 MLISN 399
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 136/322 (42%), Gaps = 63/322 (19%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 73 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 132
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I E KRI++ + + A S G++ K+L + G +
Sbjct: 133 ITIYGNPE----------NCTNACKRILEVMQQE---ANSTNKGEICLKILAHNNLIGRI 179
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ F L +R++ V G + +A I + LR+
Sbjct: 180 IGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQ 237
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + G G N P Q +
Sbjct: 238 S---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTSMPFPSCQGFA 284
Query: 357 Y-YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
PA++ PP+ P ++ Q T + IP + A
Sbjct: 285 MSKTPANVVPPV--------------FPNDM--------------QETTYLYIPNNAVGA 316
Query: 416 VIGTAGASISYIRRSSGATVTI 437
+IGT G+ I I R S A++ I
Sbjct: 317 IIGTKGSHIRSIMRFSNASLKI 338
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGPPGT-TERAVMISAKEEPESS 188
+ +P VG+IIG KG I+ I+ + A +KI D P TER V I E
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVGTPE---- 362
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSLIGKQGGTVKSI 247
G + I + + + GT +++ +LLV +SQ G +IGK G V+ +
Sbjct: 363 ------GQWKAQYMIFEKMREEGFMC--GTDDVRLTIELLVASSQVGRIIGKGGQNVREL 414
Query: 248 QEASNCIVRV 257
Q + ++++
Sbjct: 415 QRVTGSVIKL 424
>gi|345566886|gb|EGX49826.1| hypothetical protein AOL_s00076g710 [Arthrobotrys oligospora ATCC
24927]
Length = 379
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 149/355 (41%), Gaps = 38/355 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + PG +R + ++
Sbjct: 50 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGN-------- 101
Query: 191 PAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
+DG+ + + + L DS P+ G +LL+ +Q G++IG+QG +K IQ+
Sbjct: 102 --LDGVAKAYAMVAQTLVDSPPGAIPTTPMGTHPVRLLISHNQMGTIIGRQGLKIKHIQD 159
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD---RSIIPL 306
S VR++ +++ +R+VEV G A G+ +A+ IG K LVD R +
Sbjct: 160 VSG--VRMVAQKEM--LPQSTERIVEVQGSADGIRQAIWEIG----KCLVDDWQRGTGTI 211
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYM--PPPRQAESYYPPADLP 364
+ NP + + P + G G ++ P R D
Sbjct: 212 ------LYNPAVRSNTSHGTGSSPSVISNGGAGTSGPTDRFTNERPNRGPVRTGNGTDFS 265
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
P P +G S A + N + TQ + IP +IG G+ I
Sbjct: 266 EPSPSFPRRGHSDSTSRASAPAPNTENGEELQ------TQNISIPADMVGCIIGRGGSKI 319
Query: 425 SYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
S IR+SSGA ++I + GE I G+ + A L+ +N AE SQ
Sbjct: 320 SEIRKSSGARISIAKAPHDDTGERMFTIVGSPQSNEKALYLLYENLEAEKTRRSQ 374
>gi|257222786|gb|ACV52667.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222788|gb|ACV52668.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222804|gb|ACV52676.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
Length = 181
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 15/129 (11%)
Query: 262 DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHI 321
DLP AL+DD ++E+ G + VH+A+EL+ HLRK+LV RS+IPLF+ H+ +P +D +
Sbjct: 2 DLPPVALEDDMIIEIWGLPARVHQALELVACHLRKYLVHRSVIPLFDPHVSIPISPVD-M 60
Query: 322 PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY---YPPADLP---PPMEKQPHQGI 375
PP +GL PGY AE++ +P D PME H I
Sbjct: 61 PPFHYSDHHEGLLHEASPGYY--------SLYAEAFQLEHPWTDTSYSRYPMENFTHADI 112
Query: 376 SAYGREAPV 384
Y +EAPV
Sbjct: 113 FEYRQEAPV 121
>gi|350646767|emb|CCD58488.1| soluble guanylate cyclase gcy, putative [Schistosoma mansoni]
Length = 1102
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 20/163 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
F++LVP G+IIG+KGE I+ I +T AR+K+ D PGTTER +I
Sbjct: 6 FKILVPNVAAGAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLIIG------- 58
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
++ +++H ++ + + T V K+LVP S AG +IGK G ++ I+
Sbjct: 59 ---TLEACIQLHDYVMAKISKRPQNIAIITPTGV--KILVPDSTAGIIIGKFGNFIERIK 113
Query: 249 EASNCIVRVLGA-EDLPVFALQDDRVVEVVGDASGVHKAMELI 290
E SN ++V +D+ +F +R + + G+ KA+E+I
Sbjct: 114 EESNAFIQVSQRPKDIRLF----ERCIVITGELKERRKAVEMI 152
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 151/362 (41%), Gaps = 60/362 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ E++ ARI I +G ER V
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTXXXXXXX------ 69
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + + + + S++P+ + V+ +L+VPASQ GSLIGK G +K ++E++
Sbjct: 70 IFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
V+V G + LP +R V + G + + ++ I + + E
Sbjct: 130 GAQVQVAG-DMLPN---STERAVTISGAPEAIIQCVKQI------------CVVMLE--- 170
Query: 312 QMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQP 371
PP+ P P+ P Q P A + A+L ++ QP
Sbjct: 171 ----------SPPKGATIPYRPKPASTPVIFSGGQVRADPLGAST----ANLSLLLQHQP 216
Query: 372 HQGISAYGREA-----PVNVHGSSNAQSTPSMITQVT--------------QQMQIPLSY 412
+ G+ A +H + Q+ + + Q T ++ IP
Sbjct: 217 LPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTIPNDL 276
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEA 472
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI +
Sbjct: 277 IGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFRDV 336
Query: 473 AA 474
AA
Sbjct: 337 AA 338
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGWPGE---SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G T +PG S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 249 LGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGS 308
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 309 SERQITIT 316
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 162/381 (42%), Gaps = 88/381 (23%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S K V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
E Q+ ++ PP+ P PS P Q RQA + DL
Sbjct: 157 ECVKQICVVMLE--SPPKGVTIPYRPKPSSSPVIFAGGQV---SRQAGGHACETDLWEG- 210
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSM----ITQV----TQQMQIPLSYA------ 413
++ H G + V++HG+ Q ++ +T++ QQ P+S++
Sbjct: 211 -RRSHTGGVSL---DAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFS 266
Query: 414 ---------------------DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
+IG GA I+ IR+ SGA + I + V I+
Sbjct: 267 GGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
Query: 453 GTASQVQTAQQLIQNFMAEAA 473
G+ + + AQ LI ++ A
Sbjct: 327 GSTASISLAQYLINVRLSSEA 347
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 162/381 (42%), Gaps = 88/381 (23%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S K V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
E Q+ ++ PP+ P PS P Q RQA + DL
Sbjct: 157 ECVKQICVVMLE--SPPKGVTIPYRPKPSSSPVIFAGGQV---SRQAGGHACETDLWEG- 210
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSM----ITQV----TQQMQIPLSYA------ 413
++ H G + V++HG+ Q ++ +T++ QQ P+S++
Sbjct: 211 -RRSHTGGVSL---DAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFS 266
Query: 414 ---------------------DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
+IG GA I+ IR+ SGA + I + V I+
Sbjct: 267 GGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
Query: 453 GTASQVQTAQQLIQNFMAEAA 473
G+ + + AQ LI ++ A
Sbjct: 327 GSTASISLAQYLINVRLSSEA 347
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 16/163 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RM++ ++VGSIIG+KG+ IKK E++ A+I I DG ER V ++ E
Sbjct: 14 VRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDG--SCPERIVTVTGTTE------- 64
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + I + D + P+ V+ +L+VPASQ GSLIGK G +K I+E +
Sbjct: 65 ---CIHKAFTMICKKFEEDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETT 121
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
++V +E LP +R V V G A + ++ I S +
Sbjct: 122 GASIQV-ASEMLPN---STERAVTVSGTADAITLCIQNICSIM 160
>gi|257222816|gb|ACV52682.1| hypothetical protein Os10g0414700 [Oryza barthii]
Length = 180
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 15/129 (11%)
Query: 262 DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHI 321
DLP AL+DD ++E+ G + VH+A+EL+ HLRK+LV RS+IPLF+ H+ +P +D +
Sbjct: 2 DLPPVALEDDMIIEIWGLPARVHQALELVACHLRKYLVHRSVIPLFDPHVSIPISPVD-M 60
Query: 322 PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY---YPPADLP---PPMEKQPHQGI 375
PP +GL PGY AE++ +P D PME H I
Sbjct: 61 PPFHYSDHHEGLLHEASPGYY--------SLYAEAFQLEHPWTDTSYSRYPMENFTHADI 112
Query: 376 SAYGREAPV 384
Y +EAPV
Sbjct: 113 FEYRQEAPV 121
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G + ER V I+
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITG---------- 66
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
A + + R I + D S A S + V+ +L+ P SQ GSLIGK G +K I
Sbjct: 67 ATEAIFRAFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEI 126
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
+E + V+V G + LP +R V + G + + + I S
Sbjct: 127 RETTGAQVQVAG-DMLPD---STERAVTISGTPQAITQCVRHICS 167
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
+Q+M IP + +IG G+ I+ IR+ SGA + I T V I+G+ + + AQ
Sbjct: 250 SQEMAIPNDFIGCIIGRQGSKINEIRQVSGAHIKIASTTDGSAVRQVTITGSPASINVAQ 309
Query: 463 QLIQNFMAEAAAPSQAQMGAS 483
LI + A QA A+
Sbjct: 310 YLINASLEMAKYTMQAASSAT 330
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 147/349 (42%), Gaps = 49/349 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG---------- 73
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ + I + S G GK + +L+VPASQ GSLIGK G +K I+
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + C ++V +E LP + +A+ L GS + + + I +
Sbjct: 134 QTTGCSIQV-ASEMLP----------------NSTERAVTLSGSAEQ---ITQCIYQICL 173
Query: 309 MHMQMP--NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES---YYPPADL 363
+ ++ P + + P PQ GP + + G + Y P ++ A
Sbjct: 174 VMLESPPRGATIPYRPKPQVTGP---VILANGQAFTIQGNYAVPTQEVAKNPLASLAALG 230
Query: 364 PPPMEKQPHQGISAYGR--EAPVNVHGSSNAQSTPSMITQVTQ-QMQIPLSYADAVIGTA 420
M GI+ G A + GS + P+ Q Q +M + +IG
Sbjct: 231 LAGMNPASTGGINHTGSAPAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKG 290
Query: 421 GASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G I+ IR+ SGA + I +E G + T+ ISG V AQ LI
Sbjct: 291 GTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLIN 339
>gi|425778068|gb|EKV16213.1| hypothetical protein PDIP_37280 [Penicillium digitatum Pd1]
gi|425780605|gb|EKV18611.1| hypothetical protein PDIG_09250 [Penicillium digitatum PHI26]
Length = 496
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 154/370 (41%), Gaps = 50/370 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 112 IRAVISSPEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQ-------- 163
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + I+ L+++ A S K +LL+P GS+IGK G ++ IQEA
Sbjct: 164 --DAAAKAFGLIIRTLNNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEA 221
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 222 SGA---RLNASDA-CLPLSTERSLVILGVADAVHIATYYVAVTLVEQLSERYGGPAASAY 277
Query: 311 --------------MQMPNPQMDHIPPPQS--WGPPQGLPP-------SGGPGYG----H 343
MQ+ + ++P P +G P+ +GG YG H
Sbjct: 278 ATRSGGPAGAVPGGMQV----VPYVPQPAGGQYGHPETFKRHHPHPNRAGGGAYGVPYLH 333
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGR-EAPVNVHG--SSNAQSTPSMIT 400
P Q ++P A P PHQ G + P G ++ A SM
Sbjct: 334 GQPAPAPVPQTPMHFPAAPQAPYGGAGPHQPAPFVGGPQQPTPGRGPPTAPAPVGASMPG 393
Query: 401 Q-VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
Q +TQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GTA Q
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQESSNERLVTITGTAECNQ 453
Query: 460 TAQQLIQNFM 469
A ++ + +
Sbjct: 454 MALYMLYSRL 463
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 151/359 (42%), Gaps = 51/359 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + IS
Sbjct: 51 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTISG--------- 101
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
D + R + + L AP G GG VS KLL+ +Q G++IG+QG
Sbjct: 102 -GCDSISRAYSIVAKAL---LEGAPQMGMGGVVSNNGTHPIKLLISHNQMGTIIGRQGLK 157
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+AS VR++ +++ +R+VEV G+ G+ KA+ I K LVD
Sbjct: 158 IKHIQDASG--VRMVAQKEM--LPQSTERIVEVQGNPEGIQKAIWEIC----KCLVDDWA 209
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE-SYYPPAD 362
+ + NP M S G QG G YG + + M A+ S P
Sbjct: 210 RGTGTV---LYNP-MVRTQTGNSGGMSQGNVGGTGREYG-SSRVMRTGNGADFSESAPRS 264
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
E Q R P + Q TQ + IP +IG AG+
Sbjct: 265 YNRRSESDAAQ------RGPPTHDENGEELQ---------TQNISIPADMVGCIIGRAGS 309
Query: 423 SISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQAQ 479
IS IR++SGA ++I ++ GE I GTA +A L+ +N AE SQ
Sbjct: 310 KISEIRKTSGARISIAKSPHDETGERMFTIMGTAKANDSALYLLYENLEAEKQRRSQGN 368
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 20/165 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + I+
Sbjct: 7 LRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITITG---------- 54
Query: 192 AMDGLLRVHKRIVDGLDSD-SSHAPSGTGGK---VSTKLLVPASQAGSLIGKQGGTVKSI 247
A + + R I L+ D ++ +GT V+ +L++PASQ GSLIGK G +K I
Sbjct: 55 ATECVFRAFTMITIKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEI 114
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
+E + V+V G + LP +R V + G + + ++LI +
Sbjct: 115 REKTGAQVQVAG-DLLPN---STERGVTISGSQDAIIQCVKLICT 155
>gi|302414660|ref|XP_003005162.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
gi|261356231|gb|EEY18659.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
Length = 478
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 147/368 (39%), Gaps = 44/368 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + I + + A+ + D G ER + +S
Sbjct: 117 IRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSG---------- 166
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + I+ L+++ PS K +LL+P GS+IGK G ++ IQEA
Sbjct: 167 VVDASAKAFGLIIRTLNNEPLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEA 226
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D + +R + V+G A VH A +GS L + L DR P +
Sbjct: 227 SGA---RLNASD-SCLPMSTERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAY 282
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPG-----------YGHNPQ--YMPPPRQAESY 357
+P P P +G G G +PQ +MPP + Y
Sbjct: 283 ATRSGGPAGVVPGGMQVVPYCPQPTTGNYGNRENFGRRHDARGQHPQQHHMPPAPYGQQY 342
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNA----------------QSTPSMITQ 401
P P P Q + + AP+ HG A +
Sbjct: 343 PPHGAQPGPAIPQQYGAQAGGYGGAPMQPHGGPAAPQPHGGHPAQPMHGGPAAGGMAGQP 402
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+TQQ+ IP A+IG G I+ IR+ SG+ + I E + E V I+GT + A
Sbjct: 403 LTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTDETNRMA 462
Query: 462 QQLIQNFM 469
++ + +
Sbjct: 463 LYMLYSRL 470
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+ EE+ ARI I DG ER V I+
Sbjct: 20 IRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDG--SCPERIVTITGTT-------- 69
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGG---KVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
D + + I L+ + +GT ++ +L++PASQ GSLIGK G +K I+
Sbjct: 70 --DAIFKAFNLICKKLEEEVGGPLAGTAIPRPPITLRLIMPASQCGSLIGKGGSKIKEIR 127
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
E + V V+ +E LP +R V V G + + + +
Sbjct: 128 EITGASV-VVASEMLPN---STERAVTVSGTSDAITQCI 162
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 158/364 (43%), Gaps = 61/364 (16%)
Query: 145 IGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIV 204
+GRKG +K+I EE+ ARI I +G ER + ++ + + + I+
Sbjct: 111 LGRKGTSVKRIREESGARINISEG--NCPERIITLTGPT----------NAIFKAFAMII 158
Query: 205 DGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGA 260
D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I+E++ V+V G
Sbjct: 159 DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG- 217
Query: 261 EDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDH 320
+ LP +R + + G V + ++ I + + E Q P ++
Sbjct: 218 DMLPN---STERAITIAGVPQSVTECVKQI------------CLVMLETLSQSPQGRVMT 262
Query: 321 IP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY-----YPPADLPP- 365
IP P P + +GG GY H + PP A S P DL
Sbjct: 263 IPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 320
Query: 366 -PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQIPLSYADAVIGTA 420
+ +Q +G + SS ++ TQ T ++ IP + +IG
Sbjct: 321 NQVARQQSHFAMLHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 380
Query: 421 GASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQ 479
GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI ++ S+
Sbjct: 381 GANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLINARLS-----SEKG 434
Query: 480 MGAS 483
MG S
Sbjct: 435 MGCS 438
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 55 ESQVTKEQVTEDQLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNL 114
E+ + ++ + ++ E+ ++ E PE + I + + +K E ++N
Sbjct: 108 EASLGRKGTSVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINS 167
Query: 115 AV-GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGT 172
++ ST P R++VPA + GS+IG+ G IK+I E T A++++ D P +
Sbjct: 168 SMTNSTAASRP----PVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNS 223
Query: 173 TERAVMIS 180
TERA+ I+
Sbjct: 224 TERAITIA 231
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 165/381 (43%), Gaps = 88/381 (23%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S K V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + +SII
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAG--------------------IPQSII--- 156
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
E Q+ ++ PP+ P PS P Q RQA + DL
Sbjct: 157 ECVKQICVVMLE--SPPKGVTIPYRPKPSSSPVIFAGGQV---SRQAGGHACETDLWEG- 210
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSM----ITQV----TQQMQIPLSYA------ 413
++ H G +A V++HG+ Q ++ +T++ QQ P+S++
Sbjct: 211 -RRSHTG--GVSLDA-VDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFS 266
Query: 414 ---DA------------------VIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEIS 452
DA +IG GA I+ IR+ SGA + I + V I+
Sbjct: 267 GGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
Query: 453 GTASQVQTAQQLIQNFMAEAA 473
G+ + + AQ LI ++ A
Sbjct: 327 GSTASISLAQYLINVRLSSEA 347
>gi|257222806|gb|ACV52677.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
Length = 181
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 262 DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHI 321
DLP AL+DD ++E+ G + VH+A+EL+ HLRK+LV RS+IPLF+ H+ +P +D +
Sbjct: 2 DLPPVALEDDMIIEIWGLPARVHQALELVACHLRKYLVHRSVIPLFDPHVSIPISPVD-M 60
Query: 322 PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP---PPMEKQPHQGISAY 378
PP +GL PGY Y + +P D PME H I Y
Sbjct: 61 PPFHYSDHHEGLLHEASPGY-----YSLYSEAFQLEHPWTDTSYSRYPMENFTHADIFEY 115
Query: 379 GREAPV 384
+EAPV
Sbjct: 116 RQEAPV 121
>gi|257222790|gb|ACV52669.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222794|gb|ACV52671.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222796|gb|ACV52672.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222798|gb|ACV52673.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222800|gb|ACV52674.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222802|gb|ACV52675.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222808|gb|ACV52678.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222810|gb|ACV52679.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222812|gb|ACV52680.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
gi|257222814|gb|ACV52681.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
Length = 181
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 262 DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHI 321
DLP AL+DD ++E+ G + VH+A+EL+ HLRK+LV RS+IPLF+ H+ +P +D +
Sbjct: 2 DLPPVALEDDMIIEIWGLPARVHQALELVACHLRKYLVHRSVIPLFDPHVSIPISPVD-M 60
Query: 322 PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP---PPMEKQPHQGISAY 378
PP +GL PGY Y + +P D PME H I Y
Sbjct: 61 PPFHYSDHHEGLLHEASPGY-----YSLYSEAFQLEHPWTDTSYSRYPMENFTHADIFEY 115
Query: 379 GREAPV 384
+EAPV
Sbjct: 116 RQEAPV 121
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 149/365 (40%), Gaps = 46/365 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + I + + A+ + D G ER + +S
Sbjct: 121 IRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVSDYQKGAVERILTVSG---------- 170
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + I+ L+ + PS + +LLVP GS+IGK G ++ IQE
Sbjct: 171 VVDAAAKAFGLIIRTLNGEPLDQPSTPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQ 230
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R V V+G A VH A + S L + L +R P +
Sbjct: 231 SGA---RLNASDA-CLPLSTERSVVVLGVADAVHIATYYVASTLLEQLTERFGGPTASAY 286
Query: 311 MQMPNPQMDHIPPPQSWGP--PQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
IP P PQ P+GG YGH P + P A P
Sbjct: 287 ATRSGGPAGVIPGGMQVVPYVPQ---PAGG-NYGH-PDNVRHNDIRSRQTPAAQYGQPYA 341
Query: 369 KQP---------HQGIS---AYGREAP-----VNVHGSSNAQSTPSMITQ-------VTQ 404
+ P H G S YG AP V G ++ P+ Q +TQ
Sbjct: 342 QGPGPQQGGASMHYGGSPAAGYGGVAPQQPQQVGHGGPASHAGPPAQPMQGVVPGQPLTQ 401
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
Q+ IP A+IG GA I+ IR+ SG+ + I E + E V I+GTA Q A +
Sbjct: 402 QIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECNQMALYM 461
Query: 465 IQNFM 469
+ + +
Sbjct: 462 LYSRL 466
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 137/324 (42%), Gaps = 67/324 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 73 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 132
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
+ I D KRI++ + + A S G++ K+L + G +
Sbjct: 133 ITIYGNP----------DNCTNACKRILEVMQQE---ALSTNKGEICLKILAHNNLIGRI 179
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
IGK G T+K I + ++ + V D+ + L +R++ V G + +A I + LR+
Sbjct: 180 IGKSGNTIKRIMQDTDTKITVSSINDINSYNL--ERIITVKGLIENMSRAENQISTKLRQ 237
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES 356
+E +Q PQ P P + + G G N MP P +S
Sbjct: 238 S---------YENDLQAIAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP-SCQS 282
Query: 357 Y---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
+ PA + PP A+ + Q T + IP +
Sbjct: 283 FAMSKTPASVVPP----------AFPND------------------MQETTYLYIPNNAV 314
Query: 414 DAVIGTAGASISYIRRSSGATVTI 437
A+IGT G+ I I R S A++ I
Sbjct: 315 GAIIGTKGSHIRSIMRFSSASLKI 338
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 124 PGWPG---ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTER 175
P +P E+ + + +P VG+IIG KG I+ I+ + A +KI LD TER
Sbjct: 295 PAFPNDMQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTER 353
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAG 234
V I E G + I + + + GT +++ +LLV +SQ G
Sbjct: 354 KVTIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVG 401
Query: 235 SLIGKQGGTVKSIQEASNCIVRV 257
+IGK G V+ +Q + ++++
Sbjct: 402 RIIGKGGQNVRELQRVTGSVIKL 424
>gi|353237678|emb|CCA69645.1| related to PBP2-PAB1 binding protein [Piriformospora indica DSM
11827]
Length = 406
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 148/365 (40%), Gaps = 83/365 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ A++ + + PG ER + +S
Sbjct: 109 MRCLIVTQDASIIIGKGGSHVNEIREKSNAKVMVSESIPGNPERILNVSG---------- 158
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A+D + + IV ++ D PS G + V+ K ++P S+ GS+IGK G +K IQEA
Sbjct: 159 ALDAVSKAFGLIVRRIN-DEPMGPSVPGSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEA 217
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S R+ +E + +R++ V G A +H A IG+ L + + L
Sbjct: 218 SGA--RLNASEGM--LPGSTERILSVTGVADAIHIATYYIGNILIQQQEAHGAVGLSYRQ 273
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP-PMEK 369
+ PP+++ G G PG QY P Q +S PA +P P++
Sbjct: 274 SR----------PPRAFNETMG---GGAPGQ----QYFPG--QYQSPMMPAAVPSGPLQ- 313
Query: 370 QPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRR 429
TQQ+ IP +IG GA I+ IR+
Sbjct: 314 ---------------------------------TQQIYIPNDLVGCIIGKGGAKINEIRQ 340
Query: 430 SSGATVTIQETRGVP-------------GEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
+S + + I E V GE V I+G +Q A ++ + + E
Sbjct: 341 TSQSQIKIMEPGAVGVGVGGQQAGPPNEGERLVVITGQPHNIQMAVGMLYHRLEEEKRKQ 400
Query: 477 QAQMG 481
AQ G
Sbjct: 401 MAQRG 405
>gi|257222792|gb|ACV52670.1| hypothetical protein Os10g0414700 [Oryza sativa Indica Group]
Length = 181
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 262 DLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHI 321
DLP AL+DD ++E+ G + VH+A+EL+ HLRK+LV RS+IPLF+ H+ +P +D +
Sbjct: 2 DLPPVALEDDMIIEIWGLPARVHQALELVACHLRKYLVHRSVIPLFDPHVSIPISPVD-M 60
Query: 322 PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP---PPMEKQPHQGISAY 378
PP +GL PGY Y + +P D PME H I Y
Sbjct: 61 PPFHYSDHHEGLLHEASPGY-----YSJYSEAFQLEHPWTDTSYSRYPMENFTHADIFEY 115
Query: 379 GREAPV 384
+EAPV
Sbjct: 116 RQEAPV 121
>gi|302655788|ref|XP_003019678.1| hypothetical protein TRV_06307 [Trichophyton verrucosum HKI 0517]
gi|291183415|gb|EFE39033.1| hypothetical protein TRV_06307 [Trichophyton verrucosum HKI 0517]
Length = 483
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 147/368 (39%), Gaps = 48/368 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 133 IRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQ-------- 184
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 185 --DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEA 242
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 243 SGA---RLNASD-SCLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 298
Query: 311 MQMPNPQMDHIPPPQSWGP--PQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
+P P PQ P+GG YGH QA P P M+
Sbjct: 299 ATRSGGPAGVVPGGMQVVPYVPQ---PAGGQ-YGHPDSLRRNNPQANRAAPGGYGVPYMQ 354
Query: 369 ----------------KQPHQGISAYGRE------APVNVHGSSNAQSTPSMITQV---- 402
P G + G AP +HG + P M V
Sbjct: 355 QPAPHPHAPQPSLHYGASPRTGYTGAGPHQPAPYGAPQPLHGGHVPPNGPPMGAAVPGQP 414
Query: 403 -TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
TQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q A
Sbjct: 415 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQMA 474
Query: 462 QQLIQNFM 469
++ + +
Sbjct: 475 LYMLYSRL 482
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 20/164 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI 194
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 313 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 366
>gi|401880798|gb|EJT45110.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 2479]
Length = 793
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 153/388 (39%), Gaps = 91/388 (23%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIGR G + +I E++ AR+ I + PG ER + +
Sbjct: 90 MRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFG---------- 139
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A+D + + IV ++ + S G + V+ K ++P S+ GS+IG+ G +K IQ+A
Sbjct: 140 ALDAVSKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDA 199
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S R+ +E + +R++ V G A +H A+ IG+ L ++
Sbjct: 200 SGA--RLNASEVM--LPGSTERILSVSGVADAIHIAVYYIGTILLEY------------- 242
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
Q NP P SG Y PQ M + + + P
Sbjct: 243 -QERNPG----------------PHSGIGTYRQQPQGMAAAQPSFTGVAPG--------- 276
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
A G AP GS QQ+ IP S A+IG AG+ I+ IR
Sbjct: 277 ------AGGASAP----GSQT------------QQIFIPNSLVGAIIGKAGSKINEIRAQ 314
Query: 431 SGATVTIQETRGVPG--------EMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMG- 481
S + + E PG E V I+G + A Q++ + + EA A MG
Sbjct: 315 SQCQIRVTEPGTAPGPGQPVNPDERLVTITGQPVNINIAVQMLYHRL-EAEKAKAAGMGG 373
Query: 482 -----ASADQGYNPYASMYGSPPSNPGH 504
A+ + P A P ++ GH
Sbjct: 374 GQPAVATVNVNEIPCAKRASQPSASTGH 401
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 151/380 (39%), Gaps = 79/380 (20%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S
Sbjct: 25 TIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG--------- 73
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I + S G GK + +L+VPASQ GSLIGK G +K I
Sbjct: 74 -TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
++ + C ++V +E LP +R V + G A + + I +
Sbjct: 133 RQTTGCSIQV-ASEMLPN---STERAVTLSGSAE----------------QITQCIYQIC 172
Query: 308 EMHMQMP--NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPA---- 361
+ ++ P + + P PQ GP + + G + Y P ++ +P A
Sbjct: 173 LVMLESPPRGATIPYRPKPQVTGP---VILANGQAFTIQGNYAVPTQETCPVFPLALATG 229
Query: 362 -------DLPPPMEKQPH-QG-ISAYGREA-----------------------PVNVHGS 389
L P+ K H QG I A+ P + G
Sbjct: 230 GLHAGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGI 289
Query: 390 SNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI---QETRGVPGE 446
++ + + Q +M + +IG G I+ IR+ SGA + I +E G +
Sbjct: 290 NHTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTD 349
Query: 447 MTVEISGTASQVQTAQQLIQ 466
T+ ISG V AQ LI
Sbjct: 350 RTITISGNPDSVALAQYLIN 369
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|406697218|gb|EKD00483.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 8904]
Length = 793
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 153/388 (39%), Gaps = 91/388 (23%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIGR G + +I E++ AR+ I + PG ER + +
Sbjct: 90 MRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFG---------- 139
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A+D + + IV ++ + S G + V+ K ++P S+ GS+IG+ G +K IQ+A
Sbjct: 140 ALDAVSKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDA 199
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S R+ +E + +R++ V G A +H A+ IG+ L ++
Sbjct: 200 SGA--RLNASEVM--LPGSTERILSVSGVADAIHIAVYYIGTILLEY------------- 242
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
Q NP P SG Y PQ M + + + P
Sbjct: 243 -QERNPG----------------PHSGIGTYRQQPQGMAAAQPSFTGVAPG--------- 276
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
A G AP GS QQ+ IP S A+IG AG+ I+ IR
Sbjct: 277 ------AGGASAP----GSQT------------QQIFIPNSLVGAIIGKAGSKINEIRAQ 314
Query: 431 SGATVTIQETRGVPG--------EMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMG- 481
S + + E PG E V I+G + A Q++ + + EA A MG
Sbjct: 315 SQCQIRVTEPGTAPGPGQPANPDERLVTITGQPVNINIAVQMLYHRL-EAEKAKAAGMGG 373
Query: 482 -----ASADQGYNPYASMYGSPPSNPGH 504
A+ + P A P ++ GH
Sbjct: 374 GQPAVATVNVNEIPCAKRASQPSASTGH 401
>gi|345564609|gb|EGX47569.1| hypothetical protein AOL_s00083g77 [Arthrobotrys oligospora ATCC
24927]
Length = 459
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 153/374 (40%), Gaps = 62/374 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ + + ++IG+ GE + +I + A+ + + G ER + +S
Sbjct: 105 VRALITSAEAATVIGKGGENVTQIRRLSEAKCTVSEYTRGAVERILTVSG---------- 154
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ ++S+ + S K +LL+P GS+IGK G ++ IQ+A
Sbjct: 155 GVDAVAKAFGLIIRTINSEPLSSASTQNSKTFPLRLLIPHILIGSIIGKGGMRIREIQDA 214
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + VVG A VH A + + L + L +R P +
Sbjct: 215 SGA---RLNASD-SCLPLSTERSLMVVGVADAVHIATYYVATTLVEQLTERFGGPAASAY 270
Query: 311 --------------MQM----PNPQMDHIPPPQSW-----------GPPQGLPPSGGPGY 341
MQ+ P P + P ++ P G+P Y
Sbjct: 271 ASRSGGPAGAVPGGMQVVPYTPQPAFGNYGHPDNYRRHNNQAQRTPANPYGIP------Y 324
Query: 342 GHNPQYMPPPRQAES---YYPPADLPPPMEKQPHQ-GISAYGREAPVNVHGSSNAQSTPS 397
H PP +Q + Y P+ P PHQ + +G G N +
Sbjct: 325 LHG---QPPVQQPAAPIHYADPSAQPAYSGAGPHQPTVPHHGAHTGPAAQGHGNMAA--- 378
Query: 398 MI--TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA 455
MI +TQQ+ IP A+IG GA I+ IR+ SG+ + I E + E V I+GT
Sbjct: 379 MIPGAPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTQ 438
Query: 456 SQVQTAQQLIQNFM 469
Q A ++ + +
Sbjct: 439 ECNQMALYMLYSRL 452
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 74/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 74/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 281 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 334
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 173/395 (43%), Gaps = 59/395 (14%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
STE+K VF+++ + G IIG++G I+ + ET A I + + ER V
Sbjct: 272 STERK-------VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVV 324
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVSTKLLVPASQAGSL 236
+SA+E ES A + L V R V+ +D + P G V TKLLVP+ A S
Sbjct: 325 TVSARENLESRYSHAQNALALVFARSVE-IDVEKGLRPGLHNGAIVKTKLLVPSHFANSF 383
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
G G ++I A+ V + + + +++ V+E+ G+ S V KA+ + S LR+
Sbjct: 384 NGN--GNREAII-ATGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRE 440
Query: 297 FLVDRSIIPLFEMHMQMPNP--------QMDHIPPPQ-----------SWG--------- 328
L+ + + L EM ++ NP Q+ ++ P Q S G
Sbjct: 441 NLLPKKV--LGEMRARVSNPYESAGGRSQIYNLQPSQQPSNSIKPQDASRGDSLSVSAAV 498
Query: 329 PPQGLPPSGGPGYGHN----PQYMPPPRQAESYYPPADLPPPMEKQPHQG-----ISAYG 379
P + SG N + + + + P L +E+ QG +S+ G
Sbjct: 499 PDLKMVRSGAEVLKSNSVMHTEVLKEVDELNDFTLPQSL---LEEDLTQGMKQLQMSSNG 555
Query: 380 REA---PVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVT 436
+ P +V +S + ++T ++ + ++ G G + +++ SGA V
Sbjct: 556 DVSSLPPRSVLAKQQRRSKGVSVRKITLELAVEKDALGSLYGRDGTGVDNLQQISGANVD 615
Query: 437 IQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
+++ G E TV ISG Q +TA LI++ + +
Sbjct: 616 VKDPTGT--EATVLISGNPEQARTAMSLIESILTD 648
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 140/373 (37%), Gaps = 67/373 (17%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P E+ R++ A +G IIG G + K+ ET +I G+ V I
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 187 SSL----------------------PPAMDGLLRVHKRIVDGLDS-DSSHAPSGTGGKVS 223
S+ A L+RV +R L + D G +
Sbjct: 82 QSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAY 141
Query: 224 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGV 283
+L +Q G+++G G V+ ++ S ++RVL P+ ++D ++++ GD V
Sbjct: 142 CGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVLAV 198
Query: 284 HKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGH 343
KA+ ++ S+++ N ++ PPP S + L G H
Sbjct: 199 KKALVMVSSYIQN------------------NAPLNGYPPPLSIKGYESLSTDGNSEDPH 240
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT 403
+ ++ P R + S ++ P+ G ++ R+ + + T V
Sbjct: 241 S-EFFPNLRSS-SLSNATEIVASNRHLPYDGGNSTERKVVFKI-----------IFTSVV 287
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
A +IG G I ++ +GA++++ V GE V +S +++
Sbjct: 288 ---------AGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSAR-ENLESRYS 337
Query: 464 LIQNFMAEAAAPS 476
QN +A A S
Sbjct: 338 HAQNALALVFARS 350
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 27/172 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
F++LVPA G+IIG+ GE I + +E AR+K+ D PGTTER +I+
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITG------- 92
Query: 189 LPPAMDGLLRVHKRIVDGLDS----------DSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++G+LR+H+ I++ + D H K K+LVP S AG +IG
Sbjct: 93 ---SVEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREK-QVKILVPNSTAGMIIG 148
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G +K I+E S V++ A +R + V+G+ KA +LI
Sbjct: 149 KGGSYIKQIKEESGAYVQISQKSKDHALA---ERCITVIGEMDNNKKACQLI 197
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGD 279
G K+LVPA AG++IGK G T+ +Q+ + V++ + D + +RV + G
Sbjct: 36 GTFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDF--YPGTTERVCLITGS 93
Query: 280 ASGVHKAMELIGSHLR 295
GV + E I ++
Sbjct: 94 VEGVLRIHEFIMEKIK 109
>gi|256089056|ref|XP_002580633.1| soluble guanylate cyclase gcy [Schistosoma mansoni]
Length = 1553
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 25/170 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
F++LVP G+IIG+KGE I+ I +T AR+K+ D PGTTER +I
Sbjct: 6 FKILVPNVAAGAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLIIG------- 58
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSH----APSGTGG---KVSTKLLVPASQAGSLIGKQG 241
++ +++H ++ + + P+G K+LVP S AG +IGK G
Sbjct: 59 ---TLEACIQLHDYVMAKISKRPQNIAIITPTGVNCMERHKQVKILVPDSTAGIIIGKFG 115
Query: 242 GTVKSIQEASNCIVRVLGA-EDLPVFALQDDRVVEVVGDASGVHKAMELI 290
++ I+E SN ++V +D+ +F +R + + G+ KA+E+I
Sbjct: 116 NFIERIKEESNAFIQVSQRPKDIRLF----ERCIVITGELKERRKAVEMI 161
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + ++
Sbjct: 25 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT-------- 74
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 75 --NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 132
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 133 RESTGAQVQVAG 144
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEP------ 185
FR+L G +IG+KG IK ET A I + + G ER + ISA E P
Sbjct: 283 FRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITISALESPGKHSKV 342
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
+S++ D + V + ++ G + S ++LVP SQ SL+G G +K
Sbjct: 343 QSAILCIFDRMEEVERNLMFG------------KPECSARVLVPKSQFSSLVGLGGAIIK 390
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ +++ + +L D+P A +RV+++ G+ V A+ ++ LR
Sbjct: 391 EMVKSTGARIEILDEMDVPACASNCERVLQITGNLVNVRDALFVVSEKLRN 441
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 74/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|409045569|gb|EKM55049.1| hypothetical protein PHACADRAFT_95060 [Phanerochaete carnosa
HHB-10118-sp]
Length = 409
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 143/361 (39%), Gaps = 84/361 (23%)
Query: 125 GWPGESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
G P ++ R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 104 GSPAANIHMRCLIVTQDASIIIGKAGTHVNEIREKSGARVMVSESIPGNPERILNVSGP- 162
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGG 242
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G
Sbjct: 163 ---------LDAVSKAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGA 213
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRS 302
+K IQ+AS R+ +E + +RV+ V G A +H A IG+
Sbjct: 214 KIKEIQDASGA--RLNASEGM--LPGSTERVLSVSGVADAIHIATYYIGN---------- 259
Query: 303 IIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
L E + +MP+ Q P + P Q SY P
Sbjct: 260 --ILIEANERMPSYQNSSYRPSST-------------------SRSRAPYQGSSYVPIGH 298
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
+ QPH AP P TQQ+ IP +IG G+
Sbjct: 299 ASALL--QPH---------AP------------PPGAQLQTQQIYIPNDLVGCIIGKGGS 335
Query: 423 SISYIRRSSGATVTIQE-------TRGVP-------GEMTVEISGTASQVQTAQQLIQNF 468
I+ IR S + + I E G P GE V I+G + +Q A QL+ +
Sbjct: 336 KINEIRHVSASQIKIMEPGAVGVGMNGQPAPAAAHEGERLVVITGAPNNIQIAVQLLYSR 395
Query: 469 M 469
+
Sbjct: 396 L 396
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQ 459
VT + IP S +VIG GA I I+ +SGA + E +PG E + +SG A +
Sbjct: 193 VTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGM-LPGSTERVLSVSGVADAIH 251
Query: 460 TAQQLIQNFMAEA 472
A I N + EA
Sbjct: 252 IATYYIGNILIEA 264
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|358368755|dbj|GAA85371.1| KH domain RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 360
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 152/363 (41%), Gaps = 61/363 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + PG +R + ++
Sbjct: 44 TLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 94
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
++G R + + GL AP G GG VS +LL+ +Q G++IG+QG
Sbjct: 95 -PLNGTARAYALVAKGL---LEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQGLK 150
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 151 IKHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLID--- 199
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGP-----GYGHNPQYMPPPRQAESYY 358
Q + + P ++ G PS G G+N + P R
Sbjct: 200 ------DWQRGTGTILYNPAVRA---SVGTTPSTSTMNQSVGNGYNSR--PYNRTGNG-- 246
Query: 359 PPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
AD YGR + + T TQ + IP +IG
Sbjct: 247 --ADFSDQS--------GGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIG 296
Query: 419 TAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPS 476
G+ I+ IRRSSGA ++I + GE I G+A + A L+ +N AE S
Sbjct: 297 RGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTRRS 356
Query: 477 QAQ 479
Q Q
Sbjct: 357 QLQ 359
>gi|328702094|ref|XP_003241800.1| PREDICTED: hypothetical protein LOC100161431 isoform 2
[Acyrthosiphon pisum]
gi|328702096|ref|XP_001944651.2| PREDICTED: hypothetical protein LOC100161431 isoform 1
[Acyrthosiphon pisum]
Length = 657
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
++L+P G+IIG+ GE I ++ ET +IK+ D PGTTER +IS SS
Sbjct: 198 MKILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTTERVCIISG-----SS 252
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGT 243
M L + +RI + D+S+ +G ++ K+L+P S AG +IGK G
Sbjct: 253 SEHIMAALTFIMERIRE--KPDASNRVQNSGDAIADREKQVKILIPNSTAGMIIGKAGAY 310
Query: 244 VKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRS 302
+K ++E S C V++ A+D + +R + V G+ G K I L K + D
Sbjct: 311 IKQLKEDSGCFVQISQKAKDTTL----QERCITVSGNTEGNKKVCLCI---LNKIIED-- 361
Query: 303 IIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGP 339
PL PN + GP P+G P
Sbjct: 362 --PL---SASCPNLSYADVN-----GPVANFNPTGSP 388
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 41/194 (21%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTTERAVMI-----SAKEEP 185
R++VPA + GS+IG+ G IK+I E T A++++ D P +TERA+ I S E
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 186 ESSLPPAMDG-------------LLRVHKRIVDGLDSDSSHAPSGTGGK----------- 221
+ ++ L ++H+ L SH P G
Sbjct: 160 KQICVVMLEAYTIQGQYAIPQPDLTKLHQ-----LAMQQSHFPMTHGNTGFSAGLDASAQ 214
Query: 222 -VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDA 280
S +L +P G +IG+QG + I++ S +++ PV DR V + G A
Sbjct: 215 TTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEG-STDRQVTITGSA 269
Query: 281 SGVHKAMELIGSHL 294
+ + A LI L
Sbjct: 270 ASISLAQYLINVRL 283
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 152/362 (41%), Gaps = 65/362 (17%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 19 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 78
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 79 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 135
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 136 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 192
Query: 287 MELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ 346
+ I +++ S + +I GP P+G P
Sbjct: 193 VSAIVQKVQEDPQSSSCL---------------NISYANVAGPVANSNPTGSP------- 230
Query: 347 YMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
Y PAD+ P ++A A+S ++ ++
Sbjct: 231 ----------YASPADVLPAAAGAAGGFLTAE----------KLAAESAKELV-----EI 265
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTI-QETRGVPGEMT--VEISGTASQVQTAQQ 463
+P + A++G G ++ + +GA + I ++ +PG V I+G+ + Q AQ
Sbjct: 266 AVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQY 325
Query: 464 LI 465
LI
Sbjct: 326 LI 327
>gi|148689196|gb|EDL21143.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689197|gb|EDL21144.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689198|gb|EDL21145.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
Length = 244
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 104/232 (44%), Gaps = 44/232 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIP- 305
I+E + V+V G DL +R V V SGV A+ L R I
Sbjct: 127 IRETTGAQVQVAG--DL--LPNSTERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPP----SGGPGYGHN-PQYMPPPR 352
+ E H P + PP G P L P S P GH P + P R
Sbjct: 170 ILEHHPVSSEPLPRYCPP---LGQPGFLCPGSVWSSDPCRGHQAPAALRPHR 218
>gi|197127216|gb|ACH43714.1| putative neuro-oncological ventral antigen 1-like protein
[Taeniopygia guttata]
Length = 220
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
++ +ET A IK+ D PGTTER +I E +++ + +R + V +
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 210 DSSHAPSGTGG--KVS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
S P T ++ K++VP S AG +IGK G TVK+I E S V++ D
Sbjct: 133 VSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD--GI 190
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 191 NLQ-ERVVTVSGEPEQNRKAVELI 213
>gi|296420990|ref|XP_002840050.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636260|emb|CAZ84241.1| unnamed protein product [Tuber melanosporum]
Length = 386
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 149/352 (42%), Gaps = 44/352 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + EET + + G +R + ++
Sbjct: 53 TLRAIVSSKEAGVIIGKAGKNVADLREETGVKAGVSKVVTGIPDRVLTVTG--------- 103
Query: 191 PAMDGLLRVHKRIVDGLDSD--SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+DG+ + + + L S+ G + +LL+ +Q G++IG+QG +K IQ
Sbjct: 104 -PLDGVAKAYAMVSQTLLDSPPSTIGGGPPPGPGTLRLLISHNQMGTIIGRQGLKIKHIQ 162
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ S R+ A+++ +RVV+V GD + A+ IG K LVD
Sbjct: 163 DVSG--TRMTAAKEM--LPQSTERVVDVAGDPEAIRTAIWEIG----KCLVD-------- 206
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSG-GPGYGHNPQYMPPPRQAESYYPP------A 361
Q + + P +S P G G G G G + +Y SY +
Sbjct: 207 -DWQRGTGTVLYNPAVRS---PGGSSSVGMGNGMGGSDRYGGERGNTRSYARTGNGADFS 262
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAG 421
D PP + H G S + + + + Q TQ + IP +IG G
Sbjct: 263 DSSPPYRR--HDGPSGRPSDRSPSSSNTQPMHTDDGEEIQ-TQNISIPADMVGCIIGRGG 319
Query: 422 ASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAE 471
I IRRSSGA ++I +T G GE I G+AS + A L+ +N AE
Sbjct: 320 TKIQDIRRSSGARISIAKTPHGDTGERMFTIMGSASSNEKALYLLYENLEAE 371
>gi|242002844|ref|XP_002436065.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
gi|215499401|gb|EEC08895.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
Length = 474
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 28/191 (14%)
Query: 114 LAVGSTEKKW-PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGP 169
L +G+T++ G G F++LVPA G+IIG+ GE I + +E AR+K+ D
Sbjct: 33 LDIGATKRSHHGGGNGTYHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFY 92
Query: 170 PGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS----------DSSHAPSGTG 219
PGTTER +I+ +++G+LR+H+ I++ + D H
Sbjct: 93 PGTTERVCLITG----------SVEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAER 142
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGD 279
K K+LVP S AG +IGK G +K I+E S V++ A +R + V+G+
Sbjct: 143 EK-QVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALA---ERCITVIGE 198
Query: 280 ASGVHKAMELI 290
KA +I
Sbjct: 199 LENNKKACHMI 209
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 147/369 (39%), Gaps = 78/369 (21%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTT 173
+G+ + ++P R+LV + VG+IIGR G I++I ++TRAR+ + G+
Sbjct: 140 TIGNRQTEFP-------LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSL 192
Query: 174 ERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQA 233
E+A+ I E + A +L V ++ A + V K+L +
Sbjct: 193 EKAITIYGNPE---NCTNACRKILEVMQQ----------EATNTNKSDVILKILAHNNLI 239
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSH 293
G +IGK+G T+K I + + V D+ F +R++ V G + KA I +
Sbjct: 240 GRIIGKEGNTIKRIMSETETKITVSSINDINSFNY--ERIITVKGSIENMSKAEAQISAK 297
Query: 294 LRKFLVDRSIIPLFEMHMQMPNPQMDHIPP--PQSWGPPQGLPPSGGPGYGHNPQYMPPP 351
LR+ FE +Q PQ P P + G+ PG G Y
Sbjct: 298 LRQS---------FENDLQSMAPQTVMFPGLHPMAMMSATGITY---PGRGGPTSYQQFA 345
Query: 352 RQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
P+ +P P+N +++ Q T + IP S
Sbjct: 346 PAPYPPMYPSTIP------------------PINPALAADVQETAFLF--------IPNS 379
Query: 412 YADAVIGTAGASISYIRRSSGATVTI----QETRGVPGE-----------MTVEISGTAS 456
A+IGT G++I + R SGA+V + E +GV G V I GTA
Sbjct: 380 AVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVTIVGTAD 439
Query: 457 QVQTAQQLI 465
AQ +I
Sbjct: 440 SQWKAQGMI 448
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD---------GPPGTTERAVMI 179
E+ F + +P VG+IIG KG I+ ++ + A +K+ G G A
Sbjct: 370 ETAF-LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQA 428
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
S K ++ D + I D L D P+ +++ ++LVP+SQ G +IG+
Sbjct: 429 SRK----VTIVGTADSQWKAQGMIFDKL-RDEGFVPNNEEVRLTVEILVPSSQVGRIIGR 483
Query: 240 QGGTVKSIQEASNCIVRV--LGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G V+ +Q + I+++ G+ D +D V ++G A I S +
Sbjct: 484 GGSNVRELQRVTGSIIKLPTQGSTD----GTEDTTTVHIIGHFLATQSAQRRIRSMV 536
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 147/369 (39%), Gaps = 78/369 (21%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTT 173
+G+ + ++P R+LV + VG+IIGR G I++I ++TRAR+ + G+
Sbjct: 140 TIGNRQTEFP-------LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSL 192
Query: 174 ERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQA 233
E+A+ I E + A +L V ++ A + V K+L +
Sbjct: 193 EKAITIYGNPE---NCTNACRKILEVMQQ----------EATNTNKSDVILKILAHNNLI 239
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSH 293
G +IGK+G T+K I + + V D+ F +R++ V G + KA I +
Sbjct: 240 GRIIGKEGNTIKRIMSETETKITVSSINDINSFNY--ERIITVKGSIENMSKAEAQISAK 297
Query: 294 LRKFLVDRSIIPLFEMHMQMPNPQMDHIPP--PQSWGPPQGLPPSGGPGYGHNPQYMPPP 351
LR+ FE +Q PQ P P + G+ PG G Y
Sbjct: 298 LRQS---------FENDLQSMAPQTVMFPGLHPMAMMSATGITY---PGRGGPTSYQQFA 345
Query: 352 RQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
P+ +P P+N +++ Q T + IP S
Sbjct: 346 PAPYPPMYPSTIP------------------PINPALAADVQETAFLF--------IPNS 379
Query: 412 YADAVIGTAGASISYIRRSSGATVTI----QETRGVPGE-----------MTVEISGTAS 456
A+IGT G++I + R SGA+V + E +GV G V I GTA
Sbjct: 380 AVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVTIVGTAD 439
Query: 457 QVQTAQQLI 465
AQ +I
Sbjct: 440 SQWKAQGMI 448
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD---------GPPGTTERAVMI 179
E+ F + +P VG+IIG KG I+ ++ + A +K+ G G A
Sbjct: 370 ETAF-LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQA 428
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
S K ++ D + I D L D P+ +++ ++LVP+SQ G +IG+
Sbjct: 429 SRK----VTIVGTADSQWKAQGMIFDKL-RDEGFVPNNEEVRLTVEILVPSSQVGRIIGR 483
Query: 240 QGGTVKSIQEASNCIVRV--LGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G V+ +Q + I+++ G+ D +D V ++G A I S +
Sbjct: 484 GGSNVRELQRVTGSIIKLPTQGSTD----GTEDTTTVHIIGHFLATQSAQRRIRSMV 536
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 150/379 (39%), Gaps = 65/379 (17%)
Query: 96 DIVPED-SQLQEKQENE-VNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIK 153
DI P D S + Q+ E V + GS + R L+ IIG+ G+ I
Sbjct: 77 DIKPADNSTVSNGQDGEQVAGSAGSVGDSSETQATQISMRTLIVTSDASIIIGKSGKHIN 136
Query: 154 KIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSH 213
+I +++ AR+ I + PG ER + +S +D + + IV ++ +
Sbjct: 137 EIRDKSNARLNISEIIPGNPERILTVSGP----------LDAVSKAFGLIVRRINDEPFD 186
Query: 214 APSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDR 272
PS G K V+ + +VP S+ GS+IGKQG +K IQEAS R+ E + +R
Sbjct: 187 QPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGA--RLTAGEAM--LPGSTER 242
Query: 273 VVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQG 332
V+ + G A VH A+ +G+ L ++ + +++P + P G
Sbjct: 243 VLSISGVADAVHIAVYYVGTIL----------------LEHQDRNANNLP----YRPTAG 282
Query: 333 LPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNA 392
P + P G NP P +QP +
Sbjct: 283 GPSTRPPAPGANPYAAP-------------------QQPFGYGAPAPPFGGAPAGAGGAP 323
Query: 393 QSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQE------TRGVPGE 446
Q P TQQ+ IP +IG G+ I+ IR S + + I E G E
Sbjct: 324 QLPPG---SQTQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNE 380
Query: 447 MTVEISGTASQVQTAQQLI 465
V I+G +Q A L+
Sbjct: 381 RLVTITGPPPNIQMAVSLL 399
>gi|241651548|ref|XP_002411283.1| conserved hypothetical protein [Ixodes scapularis]
gi|215503913|gb|EEC13407.1| conserved hypothetical protein [Ixodes scapularis]
Length = 610
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAK 182
P P + R+LV + VG+IIGR G I++I +++RAR+ + G+ E+ + I
Sbjct: 189 PLRPSDFPLRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKENAGSLEKVITIYGN 248
Query: 183 EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGG 242
E S+ ++I++ + ++S+ G+V K+L + G +IGK G
Sbjct: 249 PENCST----------ACQKILEVMQQEASNTNR---GEVPLKILAHNNLIGRIIGKSGN 295
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
T+K I E ++ + V D L +RV+ V G A GV +A +LI + LR+
Sbjct: 296 TIKRIMEQTDTKITVSSLHDASTLNL--ERVITVKGKAEGVCRAEQLISAKLRQ 347
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 18/133 (13%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G + + +P VG++IG G I+ ++ + A IK+ + ++EP
Sbjct: 438 GRELVYLYIPNVAVGAVIGTGGSSIRDMIMLSGASIKVGE------------VCRDEPT- 484
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG---GKVSTKLLVPASQAGSLIGKQGGTV 244
P + G + VH G+ + G G + ++ VP++Q G +IGK G TV
Sbjct: 485 --LPIVSGGVAVHCFQAQGMIFNKVCYEGCAGSQDGTLRVEIFVPSNQVGRIIGKGGQTV 542
Query: 245 KSIQEASNCIVRV 257
+ +Q + ++++
Sbjct: 543 RELQRLTRALIKL 555
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 148/356 (41%), Gaps = 60/356 (16%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G+ R+LVP++ G++IG+ GE IK++ E A + I D T ER V I A+
Sbjct: 103 GKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQ--TPERIVTIVAE----- 155
Query: 188 SLPPAMDGLLRVHKRIVDGLD----SDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+D ++R I+ LD + S G+ +LLV S AG++IG+ G
Sbjct: 156 -----IDNVIRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYR 210
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K ++E ++ ++V ++ P +RV++++G + + LI + L++ +
Sbjct: 211 IKELREETSTQLKVY-SQCCP---QSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPS 266
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD- 362
P M P + H PP R P
Sbjct: 267 RPYESMFYD--------------------------PNFVHEYGGFPPDRNYRGMGPRGGM 300
Query: 363 ----LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
LPP + P+ G G G S P T Q+ IP +IG
Sbjct: 301 YGGGLPPRAPRFPYGG-RGMG-------MGVSPFPPAPFGGPMQTTQVTIPNELGGTIIG 352
Query: 419 TAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAA 474
G I+ IR SGA + + E + E + ISG+ +Q+QTAQ L+Q + + A
Sbjct: 353 KGGERINRIREESGAHIVV-EPQQPNSERIITISGSHAQIQTAQYLLQQCVRTSMA 407
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 155/367 (42%), Gaps = 63/367 (17%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + I+
Sbjct: 48 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG--------- 98
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
D + R + + L AP+ G GG V + KLL+ +Q G++IG+QG
Sbjct: 99 -GCDAISRAYAIVARAL---LEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLK 154
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+AS VR++ +++ +R+VEV G G+ +A+ + K LVD
Sbjct: 155 IKHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIQRAIW----EICKCLVD--- 203
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG---------YGHNPQYMPPPRQA 354
Q + + P ++ P G SGG G YG +P+ M A
Sbjct: 204 ------DWQRGTGTVLYNPVVRTQ-PSSGGNTSGGAGFNQGSGRSDYGGSPRVMRTGNGA 256
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
+ + P + A R P + Q TQ + IP
Sbjct: 257 D--FSNGSSRPYNRRSDS---DAALRGPPTHDENGEEIQ---------TQNISIPADMVG 302
Query: 415 AVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEA 472
+IG AG+ IS IR++SGA ++I + GE I GTA ++A L+ +N AE
Sbjct: 303 CIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENLEAEK 362
Query: 473 AAPSQAQ 479
SQ Q
Sbjct: 363 MRRSQLQ 369
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V IS E ++
Sbjct: 15 LRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTISGSTE---AIYK 69
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A + + ++ + + G G ++ +L+VPASQ GSLIGK G +K I+EA+
Sbjct: 70 AFSLICTKVEEFIEMQNGKTGATAIGKCG-MTLRLIVPASQCGSLIGKGGNKIKEIREAT 128
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
++V A D V +R V + G + + +
Sbjct: 129 GAQIQV--ASD--VLPQSTERAVTLTGTRDSITQCI 160
>gi|432876388|ref|XP_004073024.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 634
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 170/413 (41%), Gaps = 63/413 (15%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER ++ E S+ A
Sbjct: 82 VPDRMVGFIIGRGGEQITRIQLESGCKIQIAADSGGLMERPCSLTGSPE---SIEQAKRL 138
Query: 196 LLRVHKRIVDG--LDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNC 253
L+++ +R +G DS GG ++L+PAS+ G +IG+ G T+K +QE +
Sbjct: 139 LVQIVERCRNGPGFHGDSE------GGTSVQEMLIPASKVGLVIGRGGDTIKQLQERAGV 192
Query: 254 IVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK----FLVDRSI--IPLF 307
+ ++ +P A D+ + + GD V A EL+ +R+ F RS + L
Sbjct: 193 KMMMIQDGPMPTGA---DKPLRISGDPYKVQAARELVLEVIREKDGDFRSGRSDFGVRLG 249
Query: 308 EMHMQMPNPQM----------DHIPPPQSWGPPQGLPPSGGPGYGHNPQYMP-----PPR 352
+ +P P+ + I Q+ G+ G +P+ + P R
Sbjct: 250 GTSLDVPVPRFAVGIVIGRNGEMIKKIQN---DAGVRIQFKTDDGISPERVAMVMGQPDR 306
Query: 353 QAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
+ + DL Q G + R V G S P + +VT IP
Sbjct: 307 CQHAVHLINDL--IQTAQERDGFGSSLRSGRVRGRGDWTMGS-PGPLQEVT--YTIPADK 361
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQLIQN-- 467
VIG G +I I + SGA V +Q P I GTA Q++ A+QLI +
Sbjct: 362 CGLVIGKGGETIKSINQQSGAHVELQRNPPPSTDPNTRVFTIRGTAQQMEVARQLIDDKI 421
Query: 468 ------------FMAEAAAPSQAQMGASADQGY--NPYASMYGSP-PSNPGHA 505
F A P+ Q G + G N Y + + +P +PGH+
Sbjct: 422 GGSGIISNGGFGFSAFTQGPTAHQNGQTFLTGVWGNTYQTSWQNPGQQDPGHS 474
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGP-PGTTERAVMISAKE 183
G SV ML+PA KVG +IGR G+ IK++ E RA +K++ DGP P ++ + IS
Sbjct: 159 GTSVQEMLIPASKVGLVIGRGGDTIKQLQE--RAGVKMMMIQDGPMPTGADKPLRISGD- 215
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG---GKVSTKLLVPASQAGSLIGKQ 240
P + + ++ D D S G G S + VP G +IG+
Sbjct: 216 ------PYKVQAARELVLEVIREKDGDFRSGRSDFGVRLGGTSLDVPVPRFAVGIVIGRN 269
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
G +K IQ + VR+ D + +RV V+G A+ LI
Sbjct: 270 GEMIKKIQNDAG--VRIQFKTD---DGISPERVAMVMGQPDRCQHAVHLI 314
>gi|115442854|ref|XP_001218234.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
gi|114188103|gb|EAU29803.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
Length = 355
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 148/356 (41%), Gaps = 56/356 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + PG +R + ++
Sbjct: 43 TLRAIVSSKEAGIIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 93
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
+ G R + + GL AP G GG VS +LL+ +Q G++IG+QG
Sbjct: 94 -PLHGTARAYALVAKGL---LEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQGLK 149
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 150 IKHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLID--- 198
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
Q + + P ++ + G GYG P AD
Sbjct: 199 ------DWQRGTGTILYNPAVRASVGSGSTNTNMGNGYGSRPYNRTG--------NGADF 244
Query: 364 PPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGAS 423
+ ++ P+ Q TQ + IP +IG AG+
Sbjct: 245 SDQSGGYSSRRSNSDAGRFPMVAEDGDEIQ---------TQNISIPADMVGCIIGRAGSK 295
Query: 424 ISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
I+ IRRSSGA ++I + GE I G+A+ + A L+ +N AE SQ
Sbjct: 296 ITEIRRSSGARISIAKAPHDETGERMFTIMGSAAANEKALYLLYENLEAEKTRRSQ 351
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ +++GSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS--CPERITTITG---------- 68
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ D + R I L+ D + V+ +L++PASQ GSLIGK G ++ I+E+S
Sbjct: 69 STDAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRESS 128
Query: 252 NCIVRVLG 259
V+V G
Sbjct: 129 GAQVQVAG 136
>gi|156717598|ref|NP_001096339.1| neuro-oncological ventral antigen 1 [Xenopus (Silurana) tropicalis]
gi|134023955|gb|AAI35782.1| LOC100124925 protein [Xenopus (Silurana) tropicalis]
Length = 508
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQFFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMIS------------------------AKEEP 185
++ +ET A IK+ D PGTTER +I AK EP
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSG--TGGKVS-TKLLVPASQAGSLIGKQGG 242
S L P K+ + L + +PS T + S K++VP S AG +IGK G
Sbjct: 133 VSILQPQTTVNPDRIKQTLSSLPPATKSSPSDPMTISRASQVKIIVPNSTAGLIIGKGGA 192
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
TVK++ E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 193 TVKAVMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 237
>gi|405122865|gb|AFR97631.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 357
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 15/167 (8%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIGR G + +I E++ AR+ + + PG ER + +S
Sbjct: 82 MRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGP--------- 132
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G +K IQEA
Sbjct: 133 -LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEA 191
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
S R+ +E + +RV+ V G A VH A+ IG+ L ++
Sbjct: 192 SGA--RLNASEAM--LPGSTERVLSVSGVADAVHIAVYYIGTILLEY 234
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|212542979|ref|XP_002151644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
gi|210066551|gb|EEA20644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
Length = 367
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 167/419 (39%), Gaps = 77/419 (18%)
Query: 75 EDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQE--KQENEVNLAVGSTEKKWPGWPGESVF 132
E+H + VP D V D + E +L++ K E E AV
Sbjct: 6 ENH--DTSVPNDEVMSDAYGRGNIGESGELEDQPKTEEEYAQAV-------------LTL 50
Query: 133 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPA 192
R +V +++ G IIG+ G+ + + +ET + + G +R + ++
Sbjct: 51 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG----------G 100
Query: 193 MDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGTVK 245
+ G R + + GL AP G GG V +LL+ +Q G++IG+QG +K
Sbjct: 101 LQGCARAYSIVAKGL---LEGAPQVGMGGVVQNNGTHPIRLLISHNQMGTIIGRQGLKIK 157
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIP 305
IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 158 HIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLID----- 204
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
Q + + P + G P G G + + + AD
Sbjct: 205 ----DWQRGTGTVLYNPAVRVSVGGSGQPSHNGDRTGGSYGGGRSYNRTGN---GADFSE 257
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ-----VTQQMQIPLSYADAVIGTA 420
P Y R NA + M+T TQ + IP +IG
Sbjct: 258 PS--------GGYNRRGS-----GDNANRSIPMVTDDGEEVQTQNISIPADMVGCIIGRG 304
Query: 421 GASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
G+ IS IRRSSGA ++I + GE I G+A + A L+ +N AE SQ
Sbjct: 305 GSKISEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKMRRSQ 363
>gi|307213191|gb|EFN88688.1| RNA-binding protein Nova-1 [Harpegnathos saltator]
Length = 514
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 20/185 (10%)
Query: 117 GSTEKKWPGWPGESVF--RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
G+T++ G G+ + ++LVP G+IIG+ G+ I ++ ++T AR+K+ D PG
Sbjct: 30 GATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPG 89
Query: 172 TTERAVMISAKEEPESSLPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKL 226
TTER +I+ E ++ MD ++ + D +D DS A + +V K+
Sbjct: 90 TTERVCLITGSVE---AIMAVMDFIMEKIREKPDLTSKTTVDFDSGKATAERDKQV--KI 144
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVL-GAEDLPVFALQDDRVVEVVGDASGVHK 285
LVP S AG +IGK G +K I+E S V++ A+DL + +R + V+G+
Sbjct: 145 LVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSL----QERCITVIGEKENNRN 200
Query: 286 AMELI 290
A+ +I
Sbjct: 201 ALLMI 205
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 207 LDSDS-------SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLG 259
LD D+ SH SG G K+LVP AG++IGK G T+ +Q+ + V++
Sbjct: 23 LDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSK 82
Query: 260 AEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ D + +RV + G + M+ I +R+
Sbjct: 83 SHDF--YPGTTERVCLITGSVEAIMAVMDFIMEKIRE 117
>gi|345311367|ref|XP_001520914.2| PREDICTED: poly(rC)-binding protein 4-like [Ornithorhynchus
anatinus]
Length = 447
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 70/133 (52%), Gaps = 18/133 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 19 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 66
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D P GG VS +L++PASQ GSLIGK G +K
Sbjct: 67 STGAVFHAVSMIAFKLDEDLCTGPP-NGGSVSKPPVTLRLVIPASQCGSLIGKAGAKIKE 125
Query: 247 IQEASNCIVRVLG 259
I+E++ V+V G
Sbjct: 126 IRESTGAQVQVAG 138
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
+Q+ +P VIG G+ IS IR+ SGA + I GE V I+G+ + AQ
Sbjct: 281 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQTEGSGERHVTITGSPVSIALAQ 340
Query: 463 QLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNPGHA 505
LI + A + S G+ P+ SPP P A
Sbjct: 341 YLITACLETAKSTSAGTPGSGPSDLPAPF-----SPPLAPSPA 378
>gi|321258532|ref|XP_003193987.1| telomere length regulating RNA binding protein; Pbp2p [Cryptococcus
gattii WM276]
gi|317460457|gb|ADV22200.1| Telomere length regulating RNA binding protein, putative; Pbp2p
[Cryptococcus gattii WM276]
Length = 357
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 15/167 (8%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIGR G + +I E++ AR+ + + PG ER + +S
Sbjct: 82 MRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGP--------- 132
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G +K IQEA
Sbjct: 133 -LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEA 191
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
S R+ +E + +RV+ V G A VH A+ IG+ L ++
Sbjct: 192 SGA--RLNASEAM--LPGSTERVLSVSGVADAVHIAVYYIGTILLEY 234
>gi|336273542|ref|XP_003351525.1| hypothetical protein SMAC_00067 [Sordaria macrospora k-hell]
gi|380095805|emb|CCC05851.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 372
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 66/367 (17%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + I+ + S
Sbjct: 51 TLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDAVSKAY 110
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
A V + +++G APS G GG +S KLL+ +Q G++IG+QG
Sbjct: 111 AA------VARSLLEG-------APSVGMGGVISANGTHPLKLLISHNQMGTVIGRQGLK 157
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR-- 301
+K IQ+ S VR++ +++ +RVVEV G G+ +A+ + K LVD
Sbjct: 158 IKHIQDVSG--VRMVAQKEM--LPQSTERVVEVQGTPEGIERAVW----EICKCLVDDWQ 209
Query: 302 --SIIPLFEMHMQMPNPQMD----HIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
+ L+ ++ P + + P +S+G + G + N R+++
Sbjct: 210 RGTGTVLYNPVVRGPGAPVSGGERNYPQERSYGSSRVTRTGNGADFSSNSGGRAYNRRSD 269
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
S A PP + + I TQ + IP
Sbjct: 270 S--DAASRGPPTHDENGEEIQ--------------------------TQNISIPADMVGC 301
Query: 416 VIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAA 473
+IG AG+ IS IR+ SGA ++I + GE I G+A +TA L+ +N AE
Sbjct: 302 IIGRAGSKISEIRKQSGARISIAKGPHDESGERMFTIMGSAKANETALYLLYENLEAEKT 361
Query: 474 APSQAQM 480
SQ +
Sbjct: 362 RRSQQAL 368
>gi|260064185|gb|ACX30053.1| MIP13670p [Drosophila melanogaster]
Length = 346
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 114 LAVGSTEKKWPGWPGESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DG 168
L +G+ + GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D
Sbjct: 128 LQLGNYKTNSCWCYGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDF 187
Query: 169 PPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGL-DSDSSHAPSGTGGKVSTKLL 227
PGTTER +I+ E + + +R + + + D+DS K+L
Sbjct: 188 YPGTTERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQER---DKQVKIL 244
Query: 228 VPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
VP S AG +IGK G +K I+E S V++ P +R + ++GD A
Sbjct: 245 VPNSTAGMIIGKGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNAC 301
Query: 288 ELIGSHL 294
++I S +
Sbjct: 302 KMILSKI 308
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPLDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
++ +ET A IK+ D PGTTER +I E +++ + +R + V +
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 210 DSSHAPSGTGG--KVS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
S P T ++ K++VP S AG +IGK G TVK+I E S V++ D
Sbjct: 133 VSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD--GI 190
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 191 NLQ-ERVVTVSGEPEQNRKAVELI 213
>gi|58259741|ref|XP_567283.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134116752|ref|XP_773048.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229333|gb|AAW45766.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 15/167 (8%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIGR G + +I E++ AR+ + + PG ER + +S
Sbjct: 82 MRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGP--------- 132
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G +K IQEA
Sbjct: 133 -LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEA 191
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
S R+ +E + +RV+ V G A VH A+ IG+ L ++
Sbjct: 192 SGA--RLNASEAM--LPGSTERVLSVSGVADAVHIAVYYIGTILLEY 234
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 74/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 97
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 98 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 156 RESTGAQVQVAG 167
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 20/163 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D ++ S + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI 162
>gi|354475601|ref|XP_003500016.1| PREDICTED: poly(rC)-binding protein 2-like [Cricetulus griseus]
Length = 325
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 151/335 (45%), Gaps = 31/335 (9%)
Query: 133 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPA 192
R+L+ ++VGSII +KGE +KK+ EE+ AR I DG ER + ++ P +++ A
Sbjct: 17 RLLMHGKEVGSIIAKKGESVKKMREESGARTSISDG--NCPERIITLAG---PTNAIFKA 71
Query: 193 MDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASN 252
++ ++ +G+ S +++ + + V+ +L+VPASQ GSLIGK G +K I+E++
Sbjct: 72 FAMII---DKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 253 CIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQ 312
V+V G + LP + + + G + + ++ I + + E Q
Sbjct: 129 AQVQVAG-DMLPN---STEWAITIAGIPQSLIECVKQI------------CVVMLETLSQ 172
Query: 313 MPNPQMDHIPPPQSWGPPQGLPPSGGP----GYGHNPQYMPPPRQAESYYPPADLPPPME 368
P+P + P L G G + P Q+ P + PP
Sbjct: 173 PPHPHPKGLTITYRPKPSSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPLEL 232
Query: 369 KQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAGASISYI 427
+ HQ ++ P+ HG++ + Q T ++ I +IG GA I+ I
Sbjct: 233 TKLHQ-LALQQSHFPMT-HGNTGFSAGLDASAQTTSHELTISNDLIGCIIGRQGAKINEI 290
Query: 428 RRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
R+ SGA + + V I+G+A+ + Q
Sbjct: 291 RQMSGAQIKTANPVEGSTDRQVTITGSAASISLPQ 325
>gi|255932595|ref|XP_002557854.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582473|emb|CAP80658.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 473
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 150/366 (40%), Gaps = 42/366 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 109 IRAVISSPEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQ-------- 160
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + I+ L+++ A S K +LL+P GS+IGK G ++ IQEA
Sbjct: 161 --DAAAKAFGLIIRTLNNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEA 218
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 219 SGA---RLNASDA-CLPLSTERSLVILGVADAVHIATYYVAVTLVEQLSERYGGPAASAY 274
Query: 311 MQ-------MPNPQMDHIP-PPQSWGPPQGLPPS-----------GGPGYG----HNPQY 347
M +P PQ G G P + GG YG H
Sbjct: 275 ATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRHHPHPNRAGGGAYGVPYLHGQPA 334
Query: 348 MPPPRQAESYYPPADLPPPMEKQPHQGISAYGR-EAPVNVHG--SSNAQSTPSMITQ-VT 403
P Q ++P A P PHQ G + P G ++ A +M Q +T
Sbjct: 335 PAPVPQTPMHFPAAPQAPYGGAGPHQPAPFVGGPQQPTPGRGPPTAPAPVGAAMPGQPLT 394
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
QQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GTA Q A
Sbjct: 395 QQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQESSNERLVTITGTAECNQMALY 454
Query: 464 LIQNFM 469
++ + +
Sbjct: 455 MLYSRL 460
>gi|164655395|ref|XP_001728827.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
gi|159102713|gb|EDP41613.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
Length = 382
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKE 183
P PG V R L+ IIG++G I +I E + AR+ I + P ER + +S
Sbjct: 79 PSTPGPIVMRALIITSDASVIIGKQGRHINEIRELSNARLNISESIPSNPERILTVSG-- 136
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGG 242
A+D + + +V ++ + PS G + S + ++P S+ G++IG+QG
Sbjct: 137 --------ALDAVSKAFGLLVRRINDEPFDQPSLPGSRAASIRFIIPNSRMGAIIGRQGS 188
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+K IQEAS R+ E + +R++ + G A +H A+ +G+ L
Sbjct: 189 KIKEIQEASGA--RLHAGETM--LPGSTERILSITGVADALHIAVYYVGATL 236
>gi|56090186|ref|NP_001007777.1| far upstream element-binding protein 3 [Danio rerio]
gi|55715803|gb|AAH85379.1| Zgc:101598 [Danio rerio]
Length = 572
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 161/408 (39%), Gaps = 55/408 (13%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G +R ++ P +++
Sbjct: 90 VPDKMVGFIIGRGGEQITRIQLESNCKIQIAADSGGMMDRPCTLTG-------TPESIEQ 142
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G ++L+PAS+ G +IGK G T+K +QE + +
Sbjct: 143 AKRLLGQIVDRCRNGPGFHSQMDGSSAVQEILIPASKVGLVIGKGGDTIKQLQERTGVKM 202
Query: 256 RVLGAEDLPV------------FALQDDR--VVEVV-----GD-ASGVHKAMELIGSHLR 295
++ + +P + +Q R VVE++ GD SG +GS +
Sbjct: 203 IMIQDDPMPTGSDKPLRISGDPYKVQQARELVVEIIREKDQGDFRSGRSDFGSRLGSSID 262
Query: 296 ----KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYM-PP 350
+F V I EM ++ N I + P G+ P Q M P
Sbjct: 263 VAVPRFAVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPD------RVAQVMGQP 312
Query: 351 PRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
R + + +L Q G TP + +VT IP
Sbjct: 313 ERCQHAVHLINELV--QTAQERDGFGGPLGPRGRGRGRGDWNIGTPGGLQEVT--YTIPA 368
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQLIQN 467
VIG G +I I + SGA V +Q P T I G+ Q++ A+QLI +
Sbjct: 369 DKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRTFSIRGSPQQMEMARQLIDD 428
Query: 468 FMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNPGHAGHAGGYGSVY 515
+ + MG ++ G +P+ +P N GG+G+ Y
Sbjct: 429 KIGASG------MGGNSSFGLSPFTQGPATPHQNGPQTFMTGGWGTTY 470
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAKEEPES 187
+V +L+PA KVG +IG+ G+ IK++ E T + I I D P P +++ + IS
Sbjct: 169 AVQEILIPASKVGLVIGKGGDTIKQLQERTGVKMIMIQDDPMPTGSDKPLRISGDPYKVQ 228
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ ++R D D S + G+ S + VP G +IG+ G +K I
Sbjct: 229 QARELVVEIIREK----DQGDFRSGRSDFGSRLGSSIDVAVPRFAVGIVIGRNGEMIKKI 284
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
Q + ++ P + DRV +V+G A+ LI
Sbjct: 285 QNDAGVRIQF-----KPDDGISPDRVAQVMGQPERCQHAVHLI 322
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ +++GSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS--CPERITTITG---------- 68
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ D + R I L+ D + V+ +L++PASQ GSLIGK G ++ I+E+S
Sbjct: 69 STDAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRESS 128
Query: 252 NCIVRVLG 259
V+V G
Sbjct: 129 GAQVQVAG 136
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 19 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 78
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 79 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 135
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 136 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 192
Query: 287 MELI 290
+ I
Sbjct: 193 VSAI 196
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
++ +ET A IK+ D PGTTER +I E +++ + +R + V +
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 210 DSSHAPSGTGG--KVS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
S P T ++ K++VP S AG +IGK G TVK+I E S V++ D
Sbjct: 133 VSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD--GI 190
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 191 NLQ-ERVVTVSGEPEQNRKAVELI 213
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 20/163 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT-------- 68
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D +S S K V+ +L+VPASQ GSLIGK G +K I
Sbjct: 69 --DAIFKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 126
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 127 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI 165
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 124 PGWPG------ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
PG+PG S + +P +G IIGR+G I +I + + A+IKI + G+ ER V
Sbjct: 255 PGFPGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQV 314
Query: 178 MIS 180
I+
Sbjct: 315 TIT 317
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG++G+ IK I + + A+I I DG ER V I+
Sbjct: 25 IRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG--SCPERIVTITGN--------- 73
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I + D P+ ++ +L+VPA+Q GSLIGK G +K I+EA
Sbjct: 74 -VDTINKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREA 132
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+ ++V +E LP +R V + G A + M+ I L
Sbjct: 133 TGASIQV-ASEMLPS---STERAVTISGSADAIVLCMQHICHIL 172
>gi|308460519|ref|XP_003092563.1| CRE-PES-4 protein [Caenorhabditis remanei]
gi|308253083|gb|EFO97035.1| CRE-PES-4 protein [Caenorhabditis remanei]
Length = 436
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 17/158 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KG+ IKKI EE+ A+I I DG ER V I+
Sbjct: 74 TIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITG--------- 122
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGT-GGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
+ + + + + + D P+ ++ +++VPA+Q GSLIGK G +K I+E
Sbjct: 123 -TLGVIGKAFNMVCNKFEEDMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIRE 181
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
A+ ++V +E LP +R V + G A ++ M
Sbjct: 182 ATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCM 215
>gi|198425067|ref|XP_002127946.1| PREDICTED: similar to insulin-like growth factor 2 mRNA binding
protein 1 [Ciona intestinalis]
Length = 601
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 165/395 (41%), Gaps = 72/395 (18%)
Query: 133 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPP 191
RMLVP+Q VG+IIG+ G+ I+ I ++T ARI + PG TE+A+ I+ E +
Sbjct: 197 RMLVPSQYVGAIIGKGGDSIRAITQKTHARIDVHRKDNPGATEKAITINGTPEACGAAVG 256
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGG--KVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
A+ ++R R ++ +GT + K+L S G LIGK+G +K+IQE
Sbjct: 257 AILDIVRDEDR--------NARQAAGTWNDDDIPLKILAHNSLIGRLIGKEGRNLKAIQE 308
Query: 250 ASNCIVRVLGA-EDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + + D+ +R + + GD +A L+ LR + +I +
Sbjct: 309 KVETKIAISNSMADMQ--QCNAERTIAIYGDNDRCAEAEVLLMEKLRSCYENDMMIAQQQ 366
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG---YGHNPQ--------YMPPPR----Q 353
H Q P + + +G QG G PG YG N Q Y R +
Sbjct: 367 PH-QYPGINFNQLS---MFGGLQG--GYGHPGMREYGMNYQGQNFRGQGYNGDQRAQMSE 420
Query: 354 AESYYPPADLPPPM--EKQPH-QGISAYG---------------REAPVNVHGSSNAQST 395
+ Y PA+ M K H + IS ++ V + GS Q
Sbjct: 421 TCTLYIPAESVGAMIGSKGSHIRNISRIANASIKIVPPEDGDDEKQRRVTIMGSPEGQWK 480
Query: 396 PSMIT---------------QVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--- 437
++T +M IP + VIG G ++ ++R + + V I
Sbjct: 481 SQFCIFDKLKQEGFFNAEDERLTSEMTIPAAIVGRVIGKGGNNVRELQRLTSSEVVIPRQ 540
Query: 438 QETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEA 472
ET G+ E+ V+I G Q+AQ+ I+ + ++
Sbjct: 541 SETEGLE-EVPVKICGNFFANQSAQRKIREMLMKS 574
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 8/128 (6%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+ P ++
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDTI-- 70
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + + + + S++P+ + V+ +L+VPASQ GSLIGK G +K ++E++
Sbjct: 71 -FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 252 NCIVRVLG 259
V+V G
Sbjct: 130 GAQVQVAG 137
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 116 VGSTEKKWPGW---PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
+G T +PG P S + +P +G IIGR+G I +I + + A+IKI + G+
Sbjct: 249 LGQTTPAFPGLDAAPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGS 308
Query: 173 TERAVMIS 180
+ER + I+
Sbjct: 309 SERQITIT 316
>gi|336265613|ref|XP_003347577.1| hypothetical protein SMAC_04885 [Sordaria macrospora k-hell]
gi|380096444|emb|CCC06492.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 469
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 139/361 (38%), Gaps = 52/361 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + +IIG+ GE + KI E + A+ + D G ER + +S
Sbjct: 127 VRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSG---------- 176
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+++ PS T K +LL+P GS+IGK G +K IQEA
Sbjct: 177 VVDAVAKAFGLIIRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEA 236
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + V+G A V H+ + V +++
Sbjct: 237 SGA---RLNASD-SCLPLSTERSLVVMGVADAV---------HIATYYVGSTLLEQLNER 283
Query: 311 MQMP-----NPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
P + + P+ GP P P P LP
Sbjct: 284 FGGPAASAYAHPLLAAALATAITTSATAAPTPGPSTACRPASTLRP-MVHLIRPSPTLPS 342
Query: 366 PMEKQ---------------PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPL 410
PM PH G + G P HG+ P +TQQ+ IP
Sbjct: 343 PMHYGGHAAAGYGAAAPHVAPHVGHAGPGPH-PAGPHGA------PVAGAALTQQIYIPN 395
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
A+IG G I+ IR+ SG+ + I E + E V I+GT + A L+ +
Sbjct: 396 DMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYLLYQRLG 455
Query: 471 E 471
E
Sbjct: 456 E 456
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 20/163 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D ++ S + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI 162
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 281 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 334
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 18/161 (11%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ P +S+
Sbjct: 19 TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---PTNSIF 73
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKS 246
A + + + H G+GG ++ +L+VPASQ GSLIGK G +K
Sbjct: 74 KAFTLICKKFEEWCSQF-----HDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
I+E + ++V A D+ +R V + G + + + +
Sbjct: 129 IREVTGASIQV--ASDM--LPNSTERAVTISGTSEAITQCI 165
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQ 459
T +M +P +IG G I+ IR+ SGA + I +E G + T+ I+G V
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVS 426
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYNPYAS 493
AQ LI + A +AQ + G P AS
Sbjct: 427 LAQYLISMSVELQKANLEAQNTQTPGSGTTPGAS 460
>gi|363749247|ref|XP_003644841.1| hypothetical protein Ecym_2278 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888474|gb|AET38024.1| Hypothetical protein Ecym_2278 [Eremothecium cymbalariae
DBVPG#7215]
Length = 398
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 146/358 (40%), Gaps = 54/358 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML + ++G KGE I +I E+T+ RI + D ER V +
Sbjct: 50 MRMLCLVKHASMVVGAKGERISRIKEDTKTRINVSDNIKNVPERVVYLRG---------- 99
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + + + +I ++ + + ++ LL+P G +IGKQG ++ I++ S
Sbjct: 100 SCEDVAKAFGKISRAINDEDDRESNERSLPLTVNLLIPHHLMGYVIGKQGSRLREIEDLS 159
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR----KFLVDRSIIPLF 307
+ V G + LP + +DRV+ + G A +H A +G + K+ ++I
Sbjct: 160 AARL-VAGPQQLP---MSNDRVLCITGVADAIHIATYYVGQTILTCEPKYKNKKTI---- 211
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
PNP + PG ++++S P LPP
Sbjct: 212 ---FYQPNPLHSVLVNNYGIAIQHQQHHQYHPG--------DKIKRSKSRMSPV-LPPTP 259
Query: 368 EKQPHQGISAYGREAPVNVHGSSNAQSTPSMI----------------TQVTQQMQIPLS 411
+ Q G P+ GS+ + ST +++ T V Q++ I S
Sbjct: 260 NEMMLQPSHNNGGVIPIGPSGSTISNSTSAVVLPHVRIVEIMNPQPQVTPVVQEIFIEDS 319
Query: 412 YADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQTAQQLIQN 467
VIG G SI+ I+ S+G ++ I E +PG E + I GT QTA +I N
Sbjct: 320 MVGNVIGKGGKSIAQIKGSTGCSIQISEP--IPGLRERKLTIIGTPIGNQTAVMMINN 375
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
++ +ET A IK+ D PGTTER +I E +++ + +R + V +
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 210 DSSHAPSGTGG--KVS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
S P T ++ K++VP S AG +IGK G TVK+I E S V++ D
Sbjct: 133 VSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD--GI 190
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 191 NLQ-ERVVTVSGEPEQNRKAVELI 213
>gi|395333911|gb|EJF66288.1| hypothetical protein DICSQDRAFT_159257 [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 141/353 (39%), Gaps = 80/353 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 103 MRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGP--------- 153
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G +K IQ+A
Sbjct: 154 -LDAVSKAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDA 212
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S R+ +E + +R++ V G A +H A IG+ L E +
Sbjct: 213 SGA--RLNASEGM--LPGSTERLLSVSGVADAIHIATYYIGN------------ILIEAN 256
Query: 311 MQMPNPQMD-HIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEK 369
+MP+ + P QS PP G + P Y P A + + P PP +
Sbjct: 257 ERMPSSNHSTYRPTSQSRRPPY-------MGSSYVPGYAPAAAAAATAHNPYAGGPPSQL 309
Query: 370 QPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRR 429
Q Q + IP +IG GA I+ IR
Sbjct: 310 QTQQ--------------------------------IYIPNDLVGCIIGKGGAKINEIRH 337
Query: 430 SSGATVTIQE-------TRGVP------GEMTVEISGTASQVQTAQQLIQNFM 469
S + + I E G P GE V I+G + +Q A QL+ + +
Sbjct: 338 MSASQIKIMEPGAVGVGMNGAPAPAGSEGERLVVITGQPANIQMAVQLLYSRL 390
>gi|320542558|ref|NP_001189200.1| pasilla, isoform L [Drosophila melanogaster]
gi|318068744|gb|ADV37291.1| pasilla, isoform L [Drosophila melanogaster]
Length = 758
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 18/190 (9%)
Query: 114 LAVGSTEKKWPGWPGESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DG 168
L +G+ + GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D
Sbjct: 234 LQLGNYKTNSCWCYGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDF 293
Query: 169 PPGTTERAVMISAKEEPESSLPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVST 224
PGTTER +I+ E + + +R + +IVD DS +
Sbjct: 294 YPGTTERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QV 347
Query: 225 KLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVH 284
K+LVP S AG +IGK G +K I+E S V++ P +R + ++GD
Sbjct: 348 KILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNK 404
Query: 285 KAMELIGSHL 294
A ++I S +
Sbjct: 405 NACKMILSKI 414
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 15 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 71
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
++ +ET A IK+ D PGTTER +I E +++ + +R + V +
Sbjct: 72 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP 131
Query: 210 DSSHAPSGTGG--KVS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
S P T ++ K++VP S AG +IGK G TVK+I E S V++ D
Sbjct: 132 VSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD--GI 189
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 190 NLQ-ERVVTVSGEPEQNRKAVELI 212
>gi|392894107|ref|NP_497351.3| Protein PES-4 [Caenorhabditis elegans]
gi|373220643|emb|CCD73932.1| Protein PES-4 [Caenorhabditis elegans]
Length = 432
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 17/158 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KG+ IKKI EE+ A+I I DG ER V I+
Sbjct: 73 TIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITG--------- 121
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGT-GGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
+ + + + + + D P+ ++ +++VPA+Q GSLIGK G +K I+E
Sbjct: 122 -TLGVIGKAFNMVCNKFEEDMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIRE 180
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
A+ ++V +E LP +R V + G A ++ M
Sbjct: 181 ATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCM 214
>gi|402886179|ref|XP_003906515.1| PREDICTED: poly(rC)-binding protein 2 [Papio anubis]
Length = 340
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 16/130 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLA 62
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKS 246
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 247 IQEASNCIVR 256
I+E + ++
Sbjct: 123 IREVTEAALK 132
>gi|427792951|gb|JAA61927.1| Putative rna-binding protein nova1/pasilla, partial [Rhipicephalus
pulchellus]
Length = 448
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 27/172 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
F++LVPA G+IIG+ GE I + +E AR+K+ D PGTTER +I+
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITG------- 92
Query: 189 LPPAMDGLLRVHKRIVDGLDS----------DSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++G+LR+H+ I++ + D H K K+LVP S AG +IG
Sbjct: 93 ---SVEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREK-QVKILVPNSTAGMIIG 148
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G +K I+E S V++ A +R + V+G+ KA +LI
Sbjct: 149 KGGSYIKQIKEESGAYVQISQKSKDHALA---ERCITVIGEMDNNKKACQLI 197
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGD 279
G K+LVPA AG++IGK G T+ +Q+ + V++ + D + +RV + G
Sbjct: 36 GTFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDF--YPGTTERVCLITGS 93
Query: 280 ASGVHKAMELI 290
GV + E I
Sbjct: 94 VEGVLRIHEFI 104
>gi|312382238|gb|EFR27763.1| hypothetical protein AND_05166 [Anopheles darlingi]
Length = 738
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 146/359 (40%), Gaps = 62/359 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E+A+ I PE+
Sbjct: 270 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYG--NPENCTM 327
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
K+I++ + + A S G++ K+L + G +IGK G T+K I +
Sbjct: 328 AC--------KKILEVMQQE---ANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 376
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + V D+ F L +R++ V G + K I + LR+ +E
Sbjct: 377 TDTKITVSSINDISSFNL--ERIITVKGTIENMSKGESQISAKLRQS---------YEND 425
Query: 311 MQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPP------RQAESYYPPAD 362
+Q PQ P P + G G P A YP ++
Sbjct: 426 LQALAPQSIMFPGLHPMAMMSTAGNGMGFTGRTGGGGGGGVPTAPGAGAGGAGGMYPGSN 485
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
P QP G A G P GSS Q T + IP + A+IGT G
Sbjct: 486 FP---MYQPPTGGPATGGVPP---GGSSEVQETTYLY--------IPNNAVGAIIGTKGL 531
Query: 423 SISYIRRSSGATVTI----------QETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
I I R SGA+V I Q+T E V I GT AQ LI M E
Sbjct: 532 HIRNIIRFSGASVKIAPLEADKPQEQQT-----ERKVTIIGTPEAQWKAQYLIFEKMRE 585
>gi|348558003|ref|XP_003464808.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Cavia porcellus]
Length = 507
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPLDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMIS------------------------AKEEP 185
++ +ET A IK+ D PGTTER +I AK EP
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS---GTGGKVSTKLLVPASQAGSLIGKQGG 242
S L P K+ + + + +PS T K++VP S AG +IGK G
Sbjct: 133 VSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGA 192
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
TVK+I E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 193 TVKAIMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 237
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 137/328 (41%), Gaps = 68/328 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 131 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 190
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSG----TGGKVSTKLLVPASQ 232
+ I E KRI++ + ++ G ++ K+L +
Sbjct: 191 ITIYGNPE----------NCTNACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNL 240
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
G +IGK G T+K I + ++ + V D+ F L +R++ V G + +A I +
Sbjct: 241 IGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQIST 298
Query: 293 HLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPR 352
LR+ +E +Q PQ P P + + G G N MP P
Sbjct: 299 KLRQS---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP- 343
Query: 353 QAESY---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
+S+ PA + PP+ P ++ Q T + IP
Sbjct: 344 SCQSFAMSKTPASVVPPV--------------FPNDL--------------QETTYLYIP 375
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTI 437
+ A+IGT G+ I I R S A++ I
Sbjct: 376 NNAVGAIIGTRGSHIRSIMRFSNASLKI 403
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAV 177
+P E+ + + +P VG+IIG +G I+ I+ + A +KI LD TER V
Sbjct: 362 FPNDLQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKV 420
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSL 236
I E G + I + + + GT +++ +LLV +SQ G +
Sbjct: 421 TIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRI 468
Query: 237 IGKQGGTVKSIQEASNCIVRV 257
IGK G V+ +Q + ++++
Sbjct: 469 IGKGGQNVRELQRVTGSVIKL 489
>gi|326920695|ref|XP_003206604.1| PREDICTED: RNA-binding protein Nova-1-like [Meleagris gallopavo]
Length = 520
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 29 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 85
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMIS------------------------AKEEP 185
++ +ET A IK+ D PGTTER +I AK EP
Sbjct: 86 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 145
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS---GTGGKVSTKLLVPASQAGSLIGKQGG 242
S L P K+ + + + +PS T K++VP S AG +IGK G
Sbjct: 146 VSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGA 205
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
TVK+I E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 206 TVKAIMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 250
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 203 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 262
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 263 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 319
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 320 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 376
Query: 287 MELI 290
+ I
Sbjct: 377 VSAI 380
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 19 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 78
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 79 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 135
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 136 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 192
Query: 287 MELI 290
+ I
Sbjct: 193 VSAI 196
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 30/170 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RM++ ++VGSIIG+KG+ IKK E++ A+I I DG ER V ++ E
Sbjct: 14 VRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGT--CPERIVTVTGSTE------- 64
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGT-----GGKV---------STKLLVPASQAGSLI 237
+L+ I + SS + S T G KV + +L+VPASQ GSLI
Sbjct: 65 ---CILKAFSLICAKFEEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLI 121
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
GK G ++ I+E + V+V +E LP +R V V G A V K +
Sbjct: 122 GKAGSKIREIREITGASVQV-ASEMLPN---STERTVTVAGTADAVTKCI 167
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 37/77 (48%)
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
TQ+MQIP VIG G I+ IR+ SGAT+ I T E V ISGT + AQ
Sbjct: 306 TQEMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEEGSKERCVSISGTPEAINLAQ 365
Query: 463 QLIQNFMAEAAAPSQAQ 479
LI S+ Q
Sbjct: 366 YLINTRQVSLRKASRLQ 382
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 67 QLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPG- 125
+ ED + ++ + PE V E I+ S + K E +L+ TE G
Sbjct: 36 KFREDSGAKINISDGTCPERIVTVTGSTECILKAFSLICAKFEEMSSLSGSPTESALNGQ 95
Query: 126 --WPGES----VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTTERAVM 178
PG++ R++VPA + GS+IG+ G I++I E T A +++ + P +TER V
Sbjct: 96 KVLPGQTPPPVTLRLIVPASQCGSLIGKAGSKIREIREITGASVQVASEMLPNSTERTVT 155
Query: 179 IS 180
++
Sbjct: 156 VA 157
>gi|355709455|gb|AES03597.1| poly binding protein 4 [Mustela putorius furo]
Length = 206
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 18/133 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 29 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 76
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 77 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 135
Query: 247 IQEASNCIVRVLG 259
I+E + V+V G
Sbjct: 136 IRETTGAQVQVAG 148
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQFFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
++ +ET A IK+ D PGTTER +I E +++ + +R + V +
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 210 DSSHAPSGTGG--KVS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
S P T ++ K++VP S AG +IGK G TVK++ E S V++ D
Sbjct: 133 VSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD--GI 190
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 191 NLQ-ERVVTVSGEPEQNRKAVELI 213
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 15 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 71
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
++ +ET A IK+ D PGTTER +I E +++ + +R + V +
Sbjct: 72 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP 131
Query: 210 DSSHAPSGTGG--KVS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
S P T ++ K++VP S AG +IGK G TVK+I E S V++ D
Sbjct: 132 VSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD--GI 189
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 190 NLQ-ERVVTVSGEPEQNRKAVELI 212
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 20/163 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT-------- 68
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D +S S K V+ +L+VPASQ GSLIGK G +K I
Sbjct: 69 --DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 126
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 127 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI 165
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 124 PGWPG------ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
PG+PG S + +P +G IIGR+G I +I + + A+IKI + G ER V
Sbjct: 279 PGFPGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQV 338
Query: 178 MIS 180
I+
Sbjct: 339 TIT 341
>gi|189194345|ref|XP_001933511.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979075|gb|EDU45701.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 434
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 143/346 (41%), Gaps = 45/346 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R + + +IIG+ GE + +I + A+ + D G ER + +S +
Sbjct: 128 VRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQ--------- 178
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV L+ + PS + K +LL+P GS+IGK G ++ IQEA
Sbjct: 179 -VDAVSKAFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEA 237
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
SN L A D + +R + V+G A VH A+ + L + L +R P +
Sbjct: 238 SNA---KLNASDT-LLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQY 293
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAES-----YYPPADLPP 365
+ +P S P Y+P P A S Y PA P
Sbjct: 294 ATRSGMAANVVPGGMSVQP-----------------YVPQPAGAGSPSRGPYGGPA-APT 335
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
P P A+G AP G+ Q +TQQ+ IP A+IG GA I+
Sbjct: 336 PYGAHPAAAPVAHGGAAPHAAVGAMPGQP-------LTQQIFIPNDMVGAIIGKGGAKIN 388
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
IR+ SG+ + I E E V I+GT Q A ++ + + +
Sbjct: 389 EIRQLSGSVIKINEPTDNSNERLVTITGTQECNQMALYMLYSRLGQ 434
>gi|314122254|ref|NP_001186641.1| RNA-binding protein Nova-1 isoform 1 [Gallus gallus]
gi|387763164|ref|NP_001248729.1| RNA-binding protein Nova-1 [Macaca mulatta]
gi|57090475|ref|XP_547754.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Canis lupus
familiaris]
gi|114652475|ref|XP_001170675.1| PREDICTED: RNA-binding protein Nova-1 isoform 3 [Pan troglodytes]
gi|224051378|ref|XP_002200539.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Taeniopygia
guttata]
gi|291403671|ref|XP_002718160.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 1
[Oryctolagus cuniculus]
gi|296214716|ref|XP_002753741.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Callithrix
jacchus]
gi|297694849|ref|XP_002824680.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Pongo abelii]
gi|332223197|ref|XP_003260754.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Nomascus
leucogenys]
gi|344273491|ref|XP_003408555.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Loxodonta
africana]
gi|395838270|ref|XP_003792040.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Otolemur
garnettii]
gi|402875871|ref|XP_003901717.1| PREDICTED: RNA-binding protein Nova-1-like [Papio anubis]
gi|410962020|ref|XP_003987575.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Felis catus]
gi|426376604|ref|XP_004055087.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Gorilla
gorilla gorilla]
gi|355778493|gb|EHH63529.1| hypothetical protein EGM_16516 [Macaca fascicularis]
gi|380813130|gb|AFE78439.1| RNA-binding protein Nova-1 isoform 1 [Macaca mulatta]
gi|410293724|gb|JAA25462.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
gi|410353659|gb|JAA43433.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
Length = 507
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMIS------------------------AKEEP 185
++ +ET A IK+ D PGTTER +I AK EP
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS---GTGGKVSTKLLVPASQAGSLIGKQGG 242
S L P K+ + + + +PS T K++VP S AG +IGK G
Sbjct: 133 VSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGA 192
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
TVK+I E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 193 TVKAIMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 237
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 20/163 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT-------- 68
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D +S S K V+ +L+VPASQ GSLIGK G +K I
Sbjct: 69 --DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 126
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 127 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI 165
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 124 PGWPG------ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
PG+PG S + +P +G IIGR+G I +I + + A+IKI + G+ ER V
Sbjct: 255 PGFPGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQV 314
Query: 178 MIS 180
I+
Sbjct: 315 TIT 317
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 84/179 (46%), Gaps = 29/179 (16%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ ET A IK+ D PGTTER ++ E
Sbjct: 32 GELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAE 91
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKV-------------STKLLVPAS 231
LL VH I + + AP G + KL+VP +
Sbjct: 92 ----------ALLSVHNFIAEKVREVPQGAPKNDLGVLLPPQSTINAERAKQAKLIVPNT 141
Query: 232 QAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
AG +IGK G TV++I E S V++ P + +RVV V G+ S V KA+ I
Sbjct: 142 TAGLIIGKGGATVRNIMEESGAWVQL---SQKPAGSNLHERVVTVSGEPSQVQKAIHSI 197
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 25 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 84
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 85 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 141
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 142 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 198
Query: 287 MELI 290
+ I
Sbjct: 199 VSAI 202
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 165/406 (40%), Gaps = 83/406 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES--SL 189
RMLVP Q VG+IIG++G IK + ++T++++ I R A E+P + S
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI--------HRKENAGAAEKPITIHST 252
Query: 190 PPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
P R+ I+D + +++ + T + K+L S G LIGK+G +K I+E
Sbjct: 253 PEGCSAACRM---ILDIMQKEANE--TKTTEDIPLKILAHNSLVGRLIGKEGRNLKKIEE 307
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
+ + + +DL ++ +R + V G KA I LR+ +E
Sbjct: 308 DTGTKITISSLQDLTIY--NPERTITVKGSIDACCKAEVEITKKLRE---------AYEN 356
Query: 310 HMQMPNPQMDHIP----------------PPQSWGPPQGLPPSGGPGYGHNPQ----YMP 349
+ N Q + IP P + GPP +PPS P+ Y+
Sbjct: 357 DIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPPTRIPPSSPEMSQSAPEQEVVYLF 416
Query: 350 PPRQ---------------------AESYYPPADLPPPMEKQ------PHQGISAYGREA 382
P Q A PA+ P E+ P A GR
Sbjct: 417 IPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKAQGR-- 474
Query: 383 PVNVHGSSNAQSTPSMITQVTQQ--MQIPLSYADAVIGTAGASISYIRRSSGATVTI--Q 438
+ G ++ S +V + +++P S A VIG G +++ ++ + A V +
Sbjct: 475 ---IFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRD 531
Query: 439 ETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQA-QMGAS 483
+T E+ V+ISG QTAQ+ I+ + + Q Q GA+
Sbjct: 532 QTPDENDEVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQGAA 577
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEEP 185
P + V + +P Q VG++IG+KG+ IK++ A IKI P TER V+I+ E
Sbjct: 408 PEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEA 467
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
+ + RI L ++ + + K+ T + VP+S AG +IGK G TV
Sbjct: 468 Q----------FKAQGRIFGKLKEENFFS-AKEEVKLETHIKVPSSAAGRVIGKGGKTVN 516
Query: 246 SIQEASNCIVRV 257
+Q ++ V V
Sbjct: 517 ELQNLTSAEVIV 528
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 68/328 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 124 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 183
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSG----TGGKVSTKLLVPASQ 232
+ I PE+ KRI++ + ++ G ++ K+L +
Sbjct: 184 ITIYG--NPENCTNAC--------KRILEVMQQEAISTNKGELSPECSEICLKILAHNNL 233
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
G +IGK G T+K I + ++ + V D+ F L +R++ V G + +A I +
Sbjct: 234 IGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQIST 291
Query: 293 HLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPR 352
LR+ +E +Q PQ P P + + G G N MP P
Sbjct: 292 KLRQS---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP- 336
Query: 353 QAESY---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
+S+ PA + PP+ P ++ Q T + IP
Sbjct: 337 SCQSFAMSKTPASVVPPV--------------FPNDL--------------QETTYLYIP 368
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTI 437
+ A+IGT G+ I I R S A++ I
Sbjct: 369 NNAVGAIIGTRGSHIRSIMRFSNASLKI 396
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAV 177
+P E+ + + +P VG+IIG +G I+ I+ + A +KI LD TER V
Sbjct: 355 FPNDLQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKV 413
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSL 236
I E G + I + + + GT +++ +LLV +SQ G +
Sbjct: 414 TIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRI 461
Query: 237 IGKQGGTVKSIQEASNCIVRV 257
IGK G V+ +Q + ++++
Sbjct: 462 IGKGGQNVRELQRVTGSVIKL 482
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 67
Query: 192 AMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K +
Sbjct: 68 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 126 RESTGAQVQVAG 137
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 68/328 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 73 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 132
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSG----TGGKVSTKLLVPASQ 232
+ I PE+ KRI++ + ++ G ++ K+L +
Sbjct: 133 ITIYGN--PENCTNAC--------KRILEVMQQEAISTNKGELSPECSEICLKILAHNNL 182
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
G +IGK G T+K I + ++ + V D+ F L +R++ V G + +A I +
Sbjct: 183 IGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQIST 240
Query: 293 HLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPR 352
LR+ +E +Q PQ P P + + G G N MP P
Sbjct: 241 KLRQS---------YENDLQAIAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP- 285
Query: 353 QAESY---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
+S+ PA + PP+ P ++ Q T + IP
Sbjct: 286 SCQSFAMSKTPASVVPPV--------------FPNDL--------------QETTYLYIP 317
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTI 437
+ A+IGT G+ I I R S A++ I
Sbjct: 318 NNAVGAIIGTRGSHIRSIMRFSNASLKI 345
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAV 177
+P E+ + + +P VG+IIG +G I+ I+ + A +KI LD TER V
Sbjct: 304 FPNDLQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKV 362
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSL 236
I E G + I + + + GT +++ +LLV +SQ G +
Sbjct: 363 TIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRI 410
Query: 237 IGKQGGTVKSIQEASNCIVRV 257
IGK G V+ +Q + ++++
Sbjct: 411 IGKGGQNVRELQRVTGSVIKL 431
>gi|256017197|ref|NP_067336.1| RNA-binding protein Nova-1 [Mus musculus]
gi|122065708|sp|Q9JKN6.2|NOVA1_MOUSE RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|148704854|gb|EDL36801.1| mCG140771, isoform CRA_b [Mus musculus]
gi|149051188|gb|EDM03361.1| neuro-oncological ventral antigen 1, isoform CRA_b [Rattus
norvegicus]
Length = 507
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMIS------------------------AKEEP 185
++ +ET A IK+ D PGTTER +I AK EP
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS---GTGGKVSTKLLVPASQAGSLIGKQGG 242
S L P K+ + + + +PS T K++VP S AG +IGK G
Sbjct: 133 VSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGA 192
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
TVK+I E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 193 TVKAIMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 237
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 19 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 78
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 79 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 135
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 136 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 192
Query: 287 MELI 290
+ I
Sbjct: 193 VSAI 196
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 19 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 78
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 79 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 135
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 136 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 192
Query: 287 MELI 290
+ I
Sbjct: 193 VSAI 196
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 68/328 (20%)
Query: 123 WPGWPG-----ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERA 176
+PG PG + R+LV ++ VG+IIGR+G I+ I +++RAR+ + G+ E++
Sbjct: 73 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKS 132
Query: 177 VMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSG----TGGKVSTKLLVPASQ 232
+ I PE+ KRI++ + ++ G ++ K+L +
Sbjct: 133 ITIYGN--PENCTNAC--------KRILEVMQQEAISTNKGELSPECSEICLKILAHNNL 182
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGS 292
G +IGK G T+K I + ++ + V D+ F L +R++ V G + +A I +
Sbjct: 183 IGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQIST 240
Query: 293 HLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPR 352
LR+ +E +Q PQ P P + + G G N MP P
Sbjct: 241 KLRQS---------YENDLQAMAPQSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP- 285
Query: 353 QAESY---YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIP 409
+S+ PA + PP+ P ++ Q T + IP
Sbjct: 286 SCQSFAMSKTPASVVPPV--------------FPNDL--------------QETTYLYIP 317
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTI 437
+ A+IGT G+ I I R S A++ I
Sbjct: 318 NNAVGAIIGTRGSHIRSIMRFSNASLKI 345
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTERAV 177
+P E+ + + +P VG+IIG +G I+ I+ + A +KI LD TER V
Sbjct: 304 FPNDLQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKV 362
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSL 236
I E G + I + + + GT +++ +LLV +SQ G +
Sbjct: 363 TIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVGRI 410
Query: 237 IGKQGGTVKSIQEASNCIVRV 257
IGK G V+ +Q + ++++
Sbjct: 411 IGKGGQNVRELQRVTGSVIKL 431
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 19 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 78
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 79 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 135
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 136 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 192
Query: 287 MELI 290
+ I
Sbjct: 193 VSAI 196
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 19 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 78
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 79 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 135
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 136 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 192
Query: 287 MELI 290
+ I
Sbjct: 193 VSAI 196
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG++G+ IK I + + A+I I DG ER V I+
Sbjct: 25 IRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG--SCPERIVTITGN--------- 73
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I + D P+ ++ +L+VPA+Q GSLIGK G +K I+EA
Sbjct: 74 -VDTINKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREA 132
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+ ++V +E LP +R V + G A + M+ I L
Sbjct: 133 TGASIQV-ASEMLPS---STERAVTISGSADAIVLCMQHICHIL 172
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
++ +ET A IK+ D PGTTER +I E +++ + +R + V +
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 210 DSSHAPSGTGG--KVS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
S P T ++ K++VP S AG +IGK G TVK++ E S V++ D
Sbjct: 133 VSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD--GI 190
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 191 NLQ-ERVVTVSGEPEQNRKAVELI 213
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 20/155 (12%)
Query: 140 KVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV 199
+VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+ D + +
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT----------DAIFKA 101
Query: 200 HKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
I + D S++P+ + V+ +L+VPASQ GSLIGK G +K I+E++ V
Sbjct: 102 FAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 161
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+V G + LP +R V + G + + ++ I
Sbjct: 162 QVAG-DMLPN---STERAVTISGTPDAIIQCVKQI 192
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTTERAVMIS 180
R++VPA + GS+IG+ G IK+I E T A++++ D P +TERAV IS
Sbjct: 129 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTIS 179
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 20/163 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT-------- 68
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D +S S K V+ +L++PASQ GSLIGK G +K I
Sbjct: 69 --DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEI 126
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 127 RESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI 165
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 124 PGWPG------ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
PG+PG S + +P +G IIGR+G I +I + + A+IKI + G+ ER V
Sbjct: 271 PGFPGLDASTPASSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQV 330
Query: 178 MIS 180
I+
Sbjct: 331 TIT 333
>gi|259487459|tpe|CBF86155.1| TPA: KH domain RNA binding protein (AFU_orthologue; AFUA_2G04940)
[Aspergillus nidulans FGSC A4]
Length = 465
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 152/365 (41%), Gaps = 43/365 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ +Q+ ++IG+ GE + +I + A+ + D G ER + +S +
Sbjct: 110 IRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQ-------- 161
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
D + + I+ L+++ A S K +LL+P GS+IGK G ++ IQ+A
Sbjct: 162 --DAVAKAFGLIIRTLNNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDA 219
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 220 SGA---RLNASDA-CLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 275
Query: 311 --------------MQM----PNPQMDHIPPPQSWG---PPQGLPPSGGPG--YGHNPQY 347
MQ+ P P P ++ P Q +G G Y H Q+
Sbjct: 276 ATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRHHPGQARAGAGAYGVPYLHG-QH 334
Query: 348 MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHG--SSNAQSTPSMITQ-VTQ 404
P P + + A P PHQ + YG G + A +M Q +TQ
Sbjct: 335 APAPVAPQPMHYGAPQTPYAGAGPHQ-PTPYGAPQAAQPRGGPTPAAPVGGAMPGQPLTQ 393
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQL 464
Q+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q A +
Sbjct: 394 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALYM 453
Query: 465 IQNFM 469
+ + +
Sbjct: 454 LYSRL 458
>gi|395516948|ref|XP_003762645.1| PREDICTED: poly(rC)-binding protein 4 [Sarcophilus harrisii]
Length = 338
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
RM++ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 19 TLRMIMHGKEVGSIIGKKGETVKRIREQSCARITISEG--SCPERITTITG--------- 67
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGG----KVSTKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D P G V+ +L++PASQ GSLIGK G +K
Sbjct: 68 -STGAVFHAVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
I+E + V+V G DL +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG--DL--LPNSTERAVTV----SGVPDAIILCVRQICAVILE 172
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 165/411 (40%), Gaps = 89/411 (21%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES--SL 189
RMLVP Q VG+IIG++G IK + ++T++++ I R A E+P + S
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI--------HRKENAGAAEKPITIHST 252
Query: 190 PPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
P R+ I+D + +++ + T + K+L S G LIGK+G +K I+E
Sbjct: 253 PEGCSAACRM---ILDIMQKEANE--TKTTEDIPLKILAHNSLVGRLIGKEGRNLKKIEE 307
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
+ + + +DL ++ +R + V G KA I LR+ +E
Sbjct: 308 DTGTKITISSLQDLTIY--NPERTITVKGSIDACCKAEVEITKKLRE---------AYEN 356
Query: 310 HMQMPNPQMDHIPPPQ-------SWGPPQGLPPSGGPG--------YGHNPQYMPPPRQA 354
+ N Q + IP S G P LPP+ GP G+NP P Q
Sbjct: 357 DIAAINQQANLIPGLNLNALGIFSSGLPV-LPPAAGPRSAVPAVAPAGYNPFLQQAPEQE 415
Query: 355 ESYY-------------------------------PPADLPPPMEKQ------PHQGISA 377
Y PA+ P E+ P A
Sbjct: 416 VVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKA 475
Query: 378 YGREAPVNVHGSSNAQSTPSMITQVTQQ--MQIPLSYADAVIGTAGASISYIRRSSGATV 435
GR + G ++ S +V + +++P S A VIG G +++ ++ + A V
Sbjct: 476 QGR-----IFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV 530
Query: 436 TI--QETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQA-QMGAS 483
+ +T E+ V+ISG QTAQ+ I+ + + Q Q GA+
Sbjct: 531 IVPRDQTPDENDEVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQGAA 581
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEEP 185
P + V + +P Q VG++IG+KG+ IK++ A IKI P TER V+I+ E
Sbjct: 412 PEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEA 471
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
+ + RI L ++ + + K+ T + VP+S AG +IGK G TV
Sbjct: 472 Q----------FKAQGRIFGKLKEENFFS-AKEEVKLETHIKVPSSAAGRVIGKGGKTVN 520
Query: 246 SIQEASNCIVRV 257
+Q ++ V V
Sbjct: 521 ELQNLTSAEVIV 532
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 19 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 78
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 79 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 135
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 136 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 192
Query: 287 MELI 290
+ I
Sbjct: 193 VSAI 196
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 83 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 142
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 143 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 199
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 200 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 256
Query: 287 MELI 290
+ I
Sbjct: 257 VSAI 260
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 65
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D ++ S + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGAQVQVAG 135
>gi|268570691|ref|XP_002640810.1| C. briggsae CBR-PES-4 protein [Caenorhabditis briggsae]
Length = 447
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 17/158 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KG+ IKKI EE+ A+I I DG ER V I+
Sbjct: 75 TIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITG--------- 123
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGT-GGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
+ + + + + + D P+ ++ +++VPA+Q GSLIGK G +K I+E
Sbjct: 124 -TLGVIGKAFNMVCNKFEEDMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIRE 182
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
A+ ++V +E LP +R V + G A ++ M
Sbjct: 183 ATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCM 216
>gi|196049606|pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 71.6 bits (174), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 16/131 (12%)
Query: 133 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPA 192
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 8 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAGP 55
Query: 193 MDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I+
Sbjct: 56 TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIR 115
Query: 249 EASNCIVRVLG 259
E++ V+V G
Sbjct: 116 ESTGAQVQVAG 126
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V IS E ++
Sbjct: 15 LRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS--CPERIVTISGSTE---AIYK 69
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A + + ++ + + G G ++ +L+VPASQ GSLIGK G +K I+EA+
Sbjct: 70 AFSLICTKVEEFIEMQNGKTGATAIGKCG-MTLRLIVPASQCGSLIGKGGNKIKEIREAT 128
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
++V A D V +R V + G + + +
Sbjct: 129 GAQIQV--ASD--VLPQSTERAVTLTGTRDSITQCI 160
>gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 45/308 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
RMLVP Q VG+IIG++G+ I+ + ++T ++I I G E+ + I + E S+
Sbjct: 169 LRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSSN-- 226
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A ++ + ++ + +D+ + ++ K+LV + G LIGK+G +K I++
Sbjct: 227 -ACRTIMDIMQK--EAIDTKFTE-------EIPLKILVHNNFVGRLIGKEGRNLKKIEQD 276
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G +A E + +R+ +E
Sbjct: 277 TGTKITISSLQDLTLY--NPERTITVKGSIEACGRAEEEVMKKIRE---------AYESD 325
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPP--RQAESYYPPADLPPPME 368
+ N Q + IP GL PSG PG G + +PPP S+
Sbjct: 326 VAAMNLQSNLIPGLNL--NALGLFPSGSPGMGPSMSSVPPPGAHGGCSF----------- 372
Query: 369 KQPHQGISAYGREAPVNVH-GSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYI 427
G S YG E P+ S++ Q+ T + IP A+IG G I +
Sbjct: 373 -----GCSPYGVEGPLWASMMSASGQTLAGSPESETVHLFIPTLAVGAIIGKQGQHIKQL 427
Query: 428 RRSSGATV 435
+GA++
Sbjct: 428 SHFAGASI 435
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 21/191 (10%)
Query: 125 GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
G P + +P VG+IIG++G+ IK++ A IK R V+I
Sbjct: 397 GSPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKASRKGMDPKHRMVIIVG--- 453
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+ AG +IGK G TV
Sbjct: 454 -----PP--EAQFKAQCRIFGKLKEENFFGPK-EEVKLEAHIKVPSFAAGRVIGKGGKTV 505
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
+Q + C V+ + P +D +V+++G + G+ I
Sbjct: 506 NELQNLT-CAEVVVPRDQTP--DEKDQVIVKIIGHFFACQVSFYRRGAVF-------CFI 555
Query: 305 PLFEMHMQMPN 315
+F H + N
Sbjct: 556 CIFTAHHNLEN 566
>gi|291575150|ref|NP_065151.2| poly(rC)-binding protein 4 isoform a [Homo sapiens]
gi|114587204|ref|XP_001170813.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan troglodytes]
gi|16877720|gb|AAH17098.1| PCBP4 protein [Homo sapiens]
gi|119585570|gb|EAW65166.1| poly(rC) binding protein 4, isoform CRA_b [Homo sapiens]
Length = 360
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 19 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG--------- 67
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVK 245
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 -STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 246 SIQEA 250
I+E+
Sbjct: 126 EIRES 130
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 33/272 (12%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++L+ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
+ V A+ +I L + D P ++ P + + P G G G
Sbjct: 70 AAVFHAVSMIAFKLDE---DLCAAPANGGNVSRPPVTLRLVIPASQCGSLIG-----KAG 121
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISA---YGREAPVNVHG----SSNAQ 393
PP+ A Y P+ + +QG S YG P V SS+A
Sbjct: 122 TKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAV 181
Query: 394 --STPSMI------TQVT-QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
+TPS++ TQ + Q+ +P VIG G+ IS IR+ SGA + I
Sbjct: 182 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 445 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
GE V I+G+ + AQ LI + A + S
Sbjct: 242 GERHVTITGSPVSIALAQYLITACLETAKSTS 273
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 14 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 73
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 74 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 130
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 131 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 187
Query: 287 MELI 290
+ I
Sbjct: 188 VSAI 191
>gi|426340777|ref|XP_004034304.1| PREDICTED: poly(rC)-binding protein 4 isoform 4 [Gorilla gorilla
gorilla]
Length = 360
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 19 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG--------- 67
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVK 245
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 -STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 246 SIQEA 250
I+E+
Sbjct: 126 EIRES 130
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 33/272 (12%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++L+ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
+ V A+ +I L + D P ++ P + + P G G G
Sbjct: 70 AAVFHAVSMIAFKLDE---DLCAAPANGGNVSRPPVTLRLVIPASQCGSLIG-----KAG 121
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISA---YGREAPVNVHG----SSNAQ 393
PP+ A Y P+ + +QG S YG P V SS+A
Sbjct: 122 TKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAV 181
Query: 394 --STPSMI------TQVT-QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
+TPS++ TQ + Q+ +P VIG G+ IS IR+ SGA + I
Sbjct: 182 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 445 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
GE V I+G+ + AQ LI + A + S
Sbjct: 242 GERHVTITGSPVSIALAQYLITACLETAKSTS 273
>gi|74208425|dbj|BAE26399.1| unnamed protein product [Mus musculus]
Length = 575
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 164/402 (40%), Gaps = 72/402 (17%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 136
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G +LL+PAS+ G +IGK G T+K +QE + +
Sbjct: 137 AKRLLGQIVDRCRNGPGFHNDMDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKM 196
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-------------------- 295
++ LP A D+ + + GD V +A E++ +R
Sbjct: 197 VMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRSDFTSRAGG 253
Query: 296 --------KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+F+V I EM ++ N I + P G+ P Q
Sbjct: 254 GSIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 303
Query: 348 MPPPRQAESYYPPAD--LPPPMEKQPHQGIS-AYGREAPVNVHGSSN-AQSTPSMITQVT 403
M PP + + P + + E++ G++ GR G S+ + TP + ++T
Sbjct: 304 MGPPDRCQHAAPIINELILTAQEREILGGLTVTRGRG-----RGRSDWSVGTPGGVQEIT 358
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQT 460
+P VIG G +I I + SGA V +Q P I G Q++
Sbjct: 359 --YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEV 416
Query: 461 AQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A+ LI + A+ +GA A G +P++ PP+ P
Sbjct: 417 ARHLIDEKVGGAS------LGAPAAFGQSPFS----QPPAAP 448
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAK-EEPE 186
++ +L+PA KVG +IG+ GE IK++ E T + + I DGP P ++ + I+ + +
Sbjct: 163 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ ++ + + G+ SD + G +VS VP G +IG+ G +K
Sbjct: 223 QAREMVLEIIREKDQADFRGVRSDFTSRAGGGSIEVS----VPRFVVGIVIGRNGEMIKK 278
Query: 247 IQE 249
IQ
Sbjct: 279 IQN 281
>gi|335299140|ref|XP_003358506.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Sus scrofa]
Length = 360
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 19 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG--------- 67
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVK 245
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 -STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 246 SIQEA 250
I+E+
Sbjct: 126 EIRES 130
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 33/272 (12%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++L+ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
+ V A+ +I L + D P ++ P + + P G G G
Sbjct: 70 AAVFHAVSMIAFKLDE---DLCAAPANGGNVSRPPVTLRLVIPASQCGSLIG-----KAG 121
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISA---YGREAPVNV------HGSSN 391
PP+ A Y P+ + +QG S YG P V G +
Sbjct: 122 TKIKEIRESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAV 181
Query: 392 AQSTPSMI------TQVT-QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
++PSM+ TQ + Q+ +P VIG G+ IS IR+ SGA + I
Sbjct: 182 PFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 445 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
GE V I+G+ + AQ LI + A + S
Sbjct: 242 GERHVTITGSPVSIALAQYLITACLETAKSTS 273
>gi|189239335|ref|XP_973573.2| PREDICTED: similar to pasilla CG16765-PK [Tribolium castaneum]
Length = 535
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 24/178 (13%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMIS 180
PG G F++LVP+ G+IIG+ GE I ++ +ET AR+K+ D PGTTER +I+
Sbjct: 39 PGGDGTYHFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLIT 98
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDS--DSSHAPSGTGGKV------STKLLVPASQ 232
++D ++ V I D + D + T K+ K+LVP S
Sbjct: 99 G----------SVDAIMVVADFIADKIREKPDLTKPLVETESKLMQDRDKQVKILVPNST 148
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
AG +IGK G +K I+E S V++ ++ +LQ +R + V+G+ +A ++I
Sbjct: 149 AGMIIGKAGNYIKQIKETSGSYVQI--SQKAKDVSLQ-ERCITVIGEKEQNRQACQMI 203
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 205 DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP 264
D D+ SH G G K+LVP+ AG++IGK G T+ +Q+ + V++ + D
Sbjct: 28 DNGDTKRSHFSPGGDGTYHFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDF- 86
Query: 265 VFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ +RV + G + + I +R+
Sbjct: 87 -YPGTTERVCLITGSVDAIMVVADFIADKIRE 117
>gi|341891904|gb|EGT47839.1| CBN-PES-4 protein [Caenorhabditis brenneri]
Length = 438
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 17/157 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KG+ IKKI EE+ A+I I DG ER V I+
Sbjct: 78 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITG---------- 125
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGT-GGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+ + + + + + D P+ ++ +++VPA+Q GSLIGK G +K I+EA
Sbjct: 126 TLGVIGKAFNMVCNKFEEDMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIREA 185
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
+ ++V +E LP +R V + G A ++ M
Sbjct: 186 TGASIQV-ASEMLP---HSTERAVTLSGTADAINLCM 218
>gi|7025507|gb|AAF35907.1|AF232828_1 ventral neuron-specific protein 1 NOVA1 [Mus musculus]
Length = 493
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 2 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 58
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMIS------------------------AKEEP 185
++ +ET A IK+ D PGTTER +I AK EP
Sbjct: 59 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP 118
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS---GTGGKVSTKLLVPASQAGSLIGKQGG 242
S L P K+ + + + +PS T K++VP S AG +IGK G
Sbjct: 119 VSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGA 178
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
TVK+I E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 179 TVKAIMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 223
>gi|410951301|ref|XP_003982336.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Felis catus]
Length = 360
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 19 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG--------- 67
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVK 245
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 -STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 246 SIQEA 250
I+E+
Sbjct: 126 EIRES 130
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 124/298 (41%), Gaps = 33/298 (11%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++L+ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
+ V A+ +I L + D P ++ P + + P G G G
Sbjct: 70 AAVFHAVSMIAFKLDE---DLCAAPANGGNVSRPPVTLRLVIPASQCGSLIG-----KAG 121
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISA---YGREAPVNV------HGSSN 391
PP+ A Y P+ + +QG S YG P V G +
Sbjct: 122 TKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAV 181
Query: 392 AQSTPSMI------TQVT-QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
++PSM+ TQ + Q+ +P VIG G+ IS IR+ SGA + I
Sbjct: 182 PFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 445 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
GE V I+G+ + AQ LI + A + S G++ P++ + P+ P
Sbjct: 242 GERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSPPLTALPTAP 299
>gi|270009705|gb|EFA06153.1| hypothetical protein TcasGA2_TC008998 [Tribolium castaneum]
Length = 564
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 24/178 (13%)
Query: 124 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMIS 180
PG G F++LVP+ G+IIG+ GE I ++ +ET AR+K+ D PGTTER +I+
Sbjct: 39 PGGDGTYHFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLIT 98
Query: 181 AKEEPESSLPPAMDGLLRVHKRIVDGLDS--DSSHAPSGTGGKV------STKLLVPASQ 232
++D ++ V I D + D + T K+ K+LVP S
Sbjct: 99 G----------SVDAIMVVADFIADKIREKPDLTKPLVETESKLMQDRDKQVKILVPNST 148
Query: 233 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
AG +IGK G +K I+E S V++ ++ +LQ +R + V+G+ +A ++I
Sbjct: 149 AGMIIGKAGNYIKQIKETSGSYVQI--SQKAKDVSLQ-ERCITVIGEKEQNRQACQMI 203
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 205 DGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP 264
D D+ SH G G K+LVP+ AG++IGK G T+ +Q+ + V++ + D
Sbjct: 28 DNGDTKRSHFSPGGDGTYHFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDF- 86
Query: 265 VFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ +RV + G + + I +R+
Sbjct: 87 -YPGTTERVCLITGSVDAIMVVADFIADKIRE 117
>gi|301767224|ref|XP_002919001.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
Length = 360
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 19 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG--------- 67
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVK 245
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 -STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 246 SIQEA 250
I+E+
Sbjct: 126 EIRES 130
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 123/298 (41%), Gaps = 33/298 (11%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++L+ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
+ V A+ +I L + D P ++ P + + P G G G
Sbjct: 70 AAVFHAVSMIAFKLDE---DLCAAPANGGNVSRPPVTLRLVIPASQCGSLIG-----KAG 121
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISA---YGREAPVNV------HGSSN 391
PP+ A Y P+ + +QG S YG P V G +
Sbjct: 122 TKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAV 181
Query: 392 AQSTPSMITQV-------TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
++PSM+ + +Q+ +P VIG G+ IS IR+ SGA + I
Sbjct: 182 PFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 445 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
GE V I+G+ + AQ LI + A + S G++ P++ + P+ P
Sbjct: 242 GERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSPPLTALPTAP 299
>gi|338714774|ref|XP_003363150.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Equus
caballus]
Length = 360
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 19 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG--------- 67
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVK 245
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 -STAAVFHAVSMIAFKLDEDLCAAPT-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 246 SIQEA 250
I+E+
Sbjct: 126 EIRES 130
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 33/298 (11%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++L+ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
+ V A+ +I L + D P + P + + P G G G
Sbjct: 70 AAVFHAVSMIAFKLDE---DLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIG-----KAG 121
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVN---------VHGSSN 391
PP+ A Y P+ + +QG S G+ V + G +
Sbjct: 122 TKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAV 181
Query: 392 AQSTPSMITQV-------TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
++PSM+ + +Q+ +P VIG G+ IS IR+ SGA + I
Sbjct: 182 PFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 445 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
GE V I+G+ + AQ LI + A + S G++ P++ + P+ P
Sbjct: 242 GERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSTPTDLPAPFSPPLTALPTAP 299
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 149/358 (41%), Gaps = 56/358 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + PG +R + ++
Sbjct: 44 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 94
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
+ G R + + GL AP G GG V+ +LL+ +Q G++IG+QG
Sbjct: 95 -PLQGTARAYALVAKGL---LEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLK 150
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 151 IKHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLID--- 199
Query: 304 IPLFEMHMQMPNPQMDHIPPPQ-SWGPPQGLPPSG-GPGYGHNPQYMPPPRQAESYYPPA 361
Q + + P + S G + S G GY P Y
Sbjct: 200 ------DWQRGTGTILYNPAVRASVGGSTSMNTSSVGNGYNSRP-----------YNRTG 242
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAG 421
+ + Q YGR + + T TQ + IP +IG G
Sbjct: 243 NGADFSDGQS----GGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGG 298
Query: 422 ASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
+ I+ IRRSSGA ++I + GE I G+A + A L+ +N AE SQ
Sbjct: 299 SKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTRRSQ 356
>gi|357602329|gb|EHJ63352.1| hypothetical protein KGM_14186 [Danaus plexippus]
Length = 546
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 25/171 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
F++LVP+ G+IIG+ GE I ++ ++T AR+K+ D PGTTERA +I+
Sbjct: 68 FKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITG------- 120
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHA---PSGTGGKV------STKLLVPASQAGSLIGK 239
+++G++ V I++ + P G K+ K+LVP S AG +IGK
Sbjct: 121 ---SVEGIMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQVKILVPNSTAGMIIGK 177
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
G +K I+E S V++ ++ +LQ +R + VVG+ KA +I
Sbjct: 178 GGNYIKQIKEQSGSYVQI--SQKAKELSLQ-ERCITVVGEKENNKKACLMI 225
>gi|348581995|ref|XP_003476762.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Cavia porcellus]
Length = 360
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 18/124 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEA 250
I+E+
Sbjct: 127 IRES 130
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 33/272 (12%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++L+ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
+ V A+ +I L + D P + P + + P G G G
Sbjct: 70 AAVFHAVSMIAFKLDE---DLCAAPANGGSVSRPPVTLRLVIPASQCGSLIG-----KAG 121
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISA---YGREAPVNV------HGSSN 391
PP+ A Y P+ + +QG S YG P V G +
Sbjct: 122 TKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAV 181
Query: 392 AQSTPSMITQV-------TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
++PS++ + +Q+ +P VIG G+ IS IR+ SGA + I
Sbjct: 182 PFASPSVVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 445 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPS 476
GE + I+G+ + AQ LI + A + S
Sbjct: 242 GERHITITGSPVSIALAQYLITACLETAKSTS 273
>gi|158256368|dbj|BAF84157.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMIS------------------------AKEEP 185
++ +ET A IK+ D PGTTER +I AK EP
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS---GTGGKVSTKLLVPASQAGSLIGKQGG 242
S L P K+ + + + +PS T K++VP S AG +IGK G
Sbjct: 133 VSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGA 192
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
TVK++ E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 193 TVKAVMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 237
>gi|242785360|ref|XP_002480578.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218720725|gb|EED20144.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 367
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 147/357 (41%), Gaps = 54/357 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R +V +++ G IIG+ G+ + + +ET + + G +R + ++
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG---------- 99
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGTV 244
A+ G R + + GL AP G GG V +LL+ +Q G++IG+QG +
Sbjct: 100 ALQGCARAYSIVAKGL---LEGAPQVGMGGVVQNNGTHPIRLLISHNQMGTIIGRQGLKI 156
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 157 KHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLID---- 204
Query: 305 PLFEMHMQMPNPQMDHIPPPQ-SWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
Q + + P + S G L +G G R AD
Sbjct: 205 -----DWQRGTGTVLYNPAVRVSIGGSGQLNHNGDRTGGSYGGGRSYNRTGNG----ADF 255
Query: 364 PPPMEKQPHQGISAYG-REAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
P +G G R P+ Q TQ + IP +IG G+
Sbjct: 256 SEPSGGYNRRGSGDNGNRNLPLVTDDGEEVQ---------TQNISIPADMVGCIIGRGGS 306
Query: 423 SISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
IS IRRSSGA ++I + GE I G+A + A L+ +N AE SQ
Sbjct: 307 KISEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKMRRSQ 363
>gi|345495410|ref|XP_001602171.2| PREDICTED: hypothetical protein LOC100118119 [Nasonia vitripennis]
Length = 533
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 117 GSTEKKWPGWPGESVF--RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
G+T++ G G+ + ++LVP G+IIG+ GE I ++ ++T AR+K+ D PG
Sbjct: 30 GATKRSHYGTGGDGTYHLKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPG 89
Query: 172 TTERAVMISAKEEPESSLPPAMDGLLRVHKRIVD-----GLDSDSSHAPSGTGGKVSTKL 226
TTER +I+ + ++ MD ++ + D +D DS A + +V K+
Sbjct: 90 TTERVCLITGSVD---AIMAVMDFIMEKIREKPDLTTKTTVDFDSGKATAERDKQV--KI 144
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LVP S AG +IGK G +K I+E S V++ ++ +LQ +R + V+G+ A
Sbjct: 145 LVPNSTAGMIIGKAGNYIKQIKEESGSYVQI--SQKAKDVSLQ-ERCITVIGEKENNRNA 201
Query: 287 MELI 290
+ +I
Sbjct: 202 LLMI 205
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 212 SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDD 271
SH +G G K+LVP AG++IGK G T+ +Q+ + V++ + D + +
Sbjct: 35 SHYGTGGDGTYHLKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHDF--YPGTTE 92
Query: 272 RVVEVVGDASGVHKAMELIGSHLRK 296
RV + G + M+ I +R+
Sbjct: 93 RVCLITGSVDAIMAVMDFIMEKIRE 117
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGT--CPERIVTITGPT-------- 68
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D +S S K V+ +L+VPASQ GSLIGK G +K I
Sbjct: 69 --DAIFKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 126
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 127 RESTGAQVQVAG 138
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 124 PGWPG------ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
PG+PG S + +P +G IIGR+G I +I + + A+IKI + G+ ER V
Sbjct: 255 PGFPGLDATTPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQV 314
Query: 178 MIS 180
I+
Sbjct: 315 TIT 317
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 76/128 (59%), Gaps = 8/128 (6%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ E+ ARI I +G ER V I+ P ++
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG--NCPERIVTITG---PTDAI-- 68
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + + +++ +++P+ + V+ +L+VPASQ GSLIGK G +K I+E++
Sbjct: 69 -FKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 252 NCIVRVLG 259
V+V G
Sbjct: 128 GAQVQVAG 135
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G+TER + I+
Sbjct: 269 PQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITIT 322
>gi|442618214|ref|NP_001262415.1| pasilla, isoform R [Drosophila melanogaster]
gi|440217247|gb|AGB95797.1| pasilla, isoform R [Drosophila melanogaster]
Length = 780
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 270 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 329
Query: 183 EEPESSLPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E + + +R + +IVD DS + K+LVP S AG +IG
Sbjct: 330 TEAIMVVMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIG 383
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 384 KGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 436
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 35/182 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISA---KEEPES 187
+FR+L PA K G +IG+ G I++ E+T A+I+I D G ER ++I A K + E+
Sbjct: 101 LFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREA 160
Query: 188 SL------------------------------PPAMDGLLRVHKRI--VDGLDSDSSHAP 215
S PA L+RV +RI VD +
Sbjct: 161 SAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKE 220
Query: 216 SGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVE 275
V +LL P++Q G ++G+ G V+ I++ S +RVL + +P A D +++
Sbjct: 221 DLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQ 280
Query: 276 VV 277
VV
Sbjct: 281 VV 282
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 135/341 (39%), Gaps = 63/341 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ IIG+ G+ I +I +++ AR+ I + PG ER + +S
Sbjct: 549 MRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGP--------- 599
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + S G K V+ + +VP S+ GS+IGKQG +K IQEA
Sbjct: 600 -LDAVSKAFGLIVRRINDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEA 658
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S R+ E + +RV+ + G A VH A+ +GS L
Sbjct: 659 SG--ARLTAGEAM--LPGSTERVLSISGVADAVHIAVYYVGSIL---------------- 698
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
++ P+ +++P + P G P + G NP P +Q
Sbjct: 699 LEHPDRNANNLP----YRPTAGGPSTRAGAAGANPYAAP-------------------QQ 735
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
P + Q P TQQ+ IP +IG G+ I+ IR
Sbjct: 736 PFGYGAPAAGFGGAPAGAGGAPQLPPG---SQTQQIFIPNDLVGCIIGKGGSKINEIRSM 792
Query: 431 SGATVTIQE------TRGVPGEMTVEISGTASQVQTAQQLI 465
S + + I E G E V I+G +Q A L+
Sbjct: 793 SASHIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLL 833
>gi|56549653|ref|NP_002506.2| RNA-binding protein Nova-1 isoform 1 [Homo sapiens]
gi|50959950|gb|AAH75039.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|50960205|gb|AAH75038.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|119586397|gb|EAW65993.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|119586399|gb|EAW65995.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|158255480|dbj|BAF83711.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMIS------------------------AKEEP 185
++ +ET A IK+ D PGTTER +I AK EP
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS---GTGGKVSTKLLVPASQAGSLIGKQGG 242
S L P K+ + + + +PS T K++VP S AG +IGK G
Sbjct: 133 VSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGA 192
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
TVK++ E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 193 TVKAVMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 237
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA------- 70
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ I LD D AP+ G VS +L++PASQ GSLIGK G +K
Sbjct: 71 ---AVFHAVSMIAFKLDEDLCAAPA-NGSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLG 259
I+E + V+V G
Sbjct: 127 IRETTGAQVQVAG 139
>gi|167516250|ref|XP_001742466.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779090|gb|EDQ92704.1| predicted protein [Monosiga brevicollis MX1]
Length = 319
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 27/235 (11%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAK 182
W S ++L+PA+ G +IGR GE I K+ EET +K+ + PGT ER +I
Sbjct: 8 WIVGSAIKLLIPAKCAGGVIGRGGENISKLQEETGLHVKLSQTREFYPGTAERTCLIQG- 66
Query: 183 EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGG 242
EP L+ R++D + ++ H GT + VP + AGS++GK G
Sbjct: 67 -EPTR--------LIVGVNRVLDIIVANDDHQ-DGTSLANPVTVAVPYNAAGSVLGKGGS 116
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDA------SGVHKAMELIGSHLRK 296
+K I++A+ C + ++ +D P A +R++++V GV + M+ + +
Sbjct: 117 ILKGIKDATGCKI-IISQKDGPA-ARYGERLIKIVSPTPLEVPREGVKRVMDALLAQEEN 174
Query: 297 FLVDRSIIPLFEMHMQM--PNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMP 349
I M + P P ++ P ++ P +GLP + YG +Y P
Sbjct: 175 LQFHNLSISYSTMEPRFGGPPPVQNYGVPAATYEPGRGLPRT---AYGGAGRYEP 226
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 18/184 (9%)
Query: 117 GSTEKKWPGWPGESVF--RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
G+T++ G G+ + ++LVP G+IIG+ G+ I ++ ++T A++KI D PG
Sbjct: 30 GATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPG 89
Query: 172 TTERAVMISAKEEPESSLPPAMDGLL-RVHKR----IVDGLDSDSSHAPSGTGGKVSTKL 226
TTER +I+ E ++ MD ++ ++ ++ + +DS+S + +V K+
Sbjct: 90 TTERVCLITGSLE---AIMAVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQV--KI 144
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LVP S AG +IGK G +K I+E S V++ ++ +LQ +R + V+G+ A
Sbjct: 145 LVPNSTAGMIIGKAGNYIKQIKEESGSYVQI--SQKAKDVSLQ-ERCITVIGEKENNRNA 201
Query: 287 MELI 290
+ +I
Sbjct: 202 LMMI 205
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 207 LDSDS-------SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLG 259
LD D+ SH SG G K+LVP AG++IGK G T+ +Q+ + V++
Sbjct: 23 LDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISK 82
Query: 260 AEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ D + +RV + G + M+ I +R+
Sbjct: 83 SHDF--YPGTTERVCLITGSLEAIMAVMDFIMDKIRE 117
>gi|355733298|gb|AES10985.1| poly binding protein 2 [Mustela putorius furo]
Length = 148
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 16/131 (12%)
Query: 133 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPA 192
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAGP 76
Query: 193 MDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I+
Sbjct: 77 TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIR 136
Query: 249 EASNCIVRVLG 259
E++ V+V G
Sbjct: 137 ESTGAQVQVAG 147
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 149/357 (41%), Gaps = 56/357 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R +V +++ G IIG+ G+ + + +ET + + PG +R + ++
Sbjct: 40 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG---------- 89
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGTV 244
+ G R + + GL AP G GG V+ +LL+ +Q G++IG+QG +
Sbjct: 90 PLQGTARAYALVAKGL---LEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLKI 146
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 147 KHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLID---- 194
Query: 305 PLFEMHMQMPNPQMDHIPPPQ-SWGPPQGLPPSG-GPGYGHNPQYMPPPRQAESYYPPAD 362
Q + + P + S G + S G GY P Y +
Sbjct: 195 -----DWQRGTGTILYNPAVRASVGGSTSMNTSSVGNGYSSRP-----------YNRTGN 238
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGA 422
+ Q YGR + + T TQ + IP +IG G+
Sbjct: 239 GADFSDGQS----GGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGS 294
Query: 423 SISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
I+ IRRSSGA ++I + GE I G+A + A L+ +N AE SQ
Sbjct: 295 KITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTRRSQ 351
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
V ++L +++G +IG I+ + ET A I + E I+A E+P +
Sbjct: 276 VLKILCSKERIGRVIGNGRATIRDLQSETGAFITLGSNRLDCDEGLFTITASEDPNAKNS 335
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
P+ L+ V ++ + ++ + SG ++ +L+V ++Q L+G++G +IQ+
Sbjct: 336 PSQRALVLVFSKMYE--NTTAKVLDSGLTSSITARLVVRSNQINCLMGEEGHIKSTIQQR 393
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + VL E P +++++V++ G V +A+ + S LR+ L+++S F+M
Sbjct: 394 TGAFITVLNVEQNPKCVSENNQIVQISGAFPNVKEAINQVTSMLREDLINQS----FQMG 449
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSG-GPGYGH--NPQYMPPPRQAESYYPPADL 363
P + P+ P P +G P +G P + P +P L
Sbjct: 450 SHFPVNYFNPCIRPEDSFPNWFSPTTGYAPNFGQVSFPLWASPVCLCLLLFPSLCL 505
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES 187
G +FR+L +VG +IG+ G I+++ E T ++I + P + R + I A S
Sbjct: 22 GYVLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLDSLYRVITIIADVGSTS 81
Query: 188 SLP------------------------PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS 223
+ A L+RV + + + GT VS
Sbjct: 82 RVKLGVIVNNASNRKKEEVQEQEVEVSRAQGALIRVFEAL---------NVRFGTSSTVS 132
Query: 224 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGV 283
++LL+ A ++IGK G ++ I++ + C V + +LP A DD +V++ G+ V
Sbjct: 133 SRLLMEACHVVTVIGKGGELMEMIRKETGCNVEIC-QYNLPSCADPDDVMVKIEGNVFAV 191
Query: 284 HKAMELIGSHL 294
K + I S L
Sbjct: 192 KKVLVSISSRL 202
>gi|296812925|ref|XP_002846800.1| KH domain RNA binding protein [Arthroderma otae CBS 113480]
gi|238842056|gb|EEQ31718.1| KH domain RNA binding protein [Arthroderma otae CBS 113480]
Length = 477
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 146/368 (39%), Gaps = 58/368 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + ++IG+ GE + +I + A+ + D G ER
Sbjct: 133 IRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVER---------------- 176
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+L I+ L+++ APS K +LL+P GS+IGK G ++ IQEA
Sbjct: 177 ----ILTAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEA 232
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
S L A D L +R + ++G A VH A + L + L +R P +
Sbjct: 233 SGA---RLNASD-SCLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAY 288
Query: 311 MQMPNPQMDHIPPPQSWGP--PQGLPPSGGPGYGH-------NPQ--------YMPPPRQ 353
+P P PQ P+GG YGH NPQ Y P Q
Sbjct: 289 ATRSGGPAGVVPGGMQVVPYVPQ---PAGGQ-YGHPDSLRRNNPQANRATPGGYGVPYMQ 344
Query: 354 AESYYPPADLPP-PMEKQPHQGISAYGRE------APVNVHGSSNAQSTPSMITQV---- 402
+P A P P QG + G AP HG + P M V
Sbjct: 345 QPGPHPHAPQPSLHYGASPRQGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQP 404
Query: 403 -TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
TQQ+ IP A+IG GA I+ IR SG+ + I E + E V I+GT Q A
Sbjct: 405 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQMA 464
Query: 462 QQLIQNFM 469
++ + +
Sbjct: 465 LYMLYSRL 472
>gi|149018652|gb|EDL77293.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018654|gb|EDL77295.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018655|gb|EDL77296.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018656|gb|EDL77297.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018658|gb|EDL77299.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018659|gb|EDL77300.1| rCG25644, isoform CRA_a [Rattus norvegicus]
Length = 183
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 18/133 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLG 259
I+E + V+V G
Sbjct: 127 IRETTGAQVQVAG 139
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 146/355 (41%), Gaps = 55/355 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R +V +++ G IIG+ G+ + + +ET + + PG +R + ++
Sbjct: 45 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG---------- 94
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGTV 244
+ G R + + GL AP G GG VS +LL+ +Q G++IG+ G +
Sbjct: 95 PLQGTARAYALVAKGL---LEGAPQMGMGGVVSNNGTHPVRLLISHNQMGTIIGRSGLKI 151
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 152 KHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLID---- 199
Query: 305 PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
Q + + P ++ + + G GY P Y
Sbjct: 200 -----DWQRGTGTILYNPAVRASVGTAPVNQNVGNGYSSRP------------YNRTGNG 242
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
Q YGR + + T TQ + IP +IG AG+ I
Sbjct: 243 ADFSDQS----GGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRAGSKI 298
Query: 425 SYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
+ IRRSSGA ++I + GE I G+A + A L+ +N AE SQ
Sbjct: 299 TEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENLEAEKTRRSQ 353
>gi|390177062|ref|XP_003736268.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858892|gb|EIM52341.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 714
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 121 KKWPGWP-GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTE 174
K W GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTE
Sbjct: 230 KTASCWCYGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTE 289
Query: 175 RAVMISAKEEP-ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQA 233
R +I+ E L MD + +D++S K+LVP S A
Sbjct: 290 RVCLITGSTEAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQER---DKQVKILVPNSTA 346
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSH 293
G +IGK G +K I+E S V++ ++ +LQ +R + ++GD A ++I S
Sbjct: 347 GMIIGKGGAFIKQIKEDSGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSK 403
Query: 294 L 294
+
Sbjct: 404 I 404
>gi|85109816|ref|XP_963102.1| hypothetical protein NCU06251 [Neurospora crassa OR74A]
gi|28924753|gb|EAA33866.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 371
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 156/367 (42%), Gaps = 67/367 (18%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + I+ + S
Sbjct: 51 TLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDAVSKAY 110
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
V + +++G APS G GG +S KLL+ +Q G++IG+QG
Sbjct: 111 AV------VARSLLEG-------APSVGMGGVISANGTHPIKLLISHNQMGTVIGRQGLK 157
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR-- 301
+K IQ+ S VR++ +++ +RVVEV G G+ +A+ I K LVD
Sbjct: 158 IKHIQDVSG--VRMVAQKEM--LPQSTERVVEVQGTPEGIQRAVWEIC----KCLVDDWQ 209
Query: 302 ----SII--PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
+++ P+ Q P + P +S+G + G + N P R+++
Sbjct: 210 RGTGTVLYNPVVRGGGQ-PLGGDRNYPQERSYGSSRVTRTGNGADFSSNSGGRPYNRRSD 268
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
S A PP + + I TQ + IP
Sbjct: 269 S--DAASRGPPTHDENGEEIQ--------------------------TQNISIPADMVGC 300
Query: 416 VIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAA 473
+IG G+ IS IR++SGA ++I + GE I G+A +TA L+ +N AE
Sbjct: 301 IIGRQGSKISEIRKASGARISIAKGPHDESGERMFTIMGSAKANETALYLLYENLEAEKT 360
Query: 474 APSQAQM 480
SQ +
Sbjct: 361 RRSQQAL 367
>gi|393220213|gb|EJD05699.1| hypothetical protein FOMMEDRAFT_79532 [Fomitiporia mediterranea
MF3/22]
Length = 281
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIGR G+ + +I E++ AR+ + + PG ER + +S
Sbjct: 4 MRCLIVTQDASIIIGRAGKHVNEIREKSGARVVVSESIPGNPERILNVSGP--------- 54
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGKQG +K IQ+A
Sbjct: 55 -LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDA 113
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S R+ +E + +RV+ V G A +H A +G+ L
Sbjct: 114 SGA--RLNASEGM--LPGSTERVLSVAGVADAIHIATYYVGNIL 153
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQ 459
VT + IP S ++IG GA I I+ +SGA + E +PG E + ++G A +
Sbjct: 85 VTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLNASEGM-LPGSTERVLSVAGVADAIH 143
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYNP 490
A + N + E Q +M +S + Y P
Sbjct: 144 IATYYVGNILIEC----QERMPSSTNSSYRP 170
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 128 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 187
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 188 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 244
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 245 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 293
>gi|119585581|gb|EAW65177.1| poly(rC) binding protein 4, isoform CRA_f [Homo sapiens]
Length = 244
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 70/133 (52%), Gaps = 18/133 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS--CPERITTITGSTAA------ 71
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 72 ----VFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLG 259
I+E + V+V G
Sbjct: 127 IRETTGAQVQVAG 139
>gi|402225510|gb|EJU05571.1| hypothetical protein DACRYDRAFT_20011 [Dacryopinax sp. DJM-731 SS1]
Length = 413
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ ARI + + PG ER + ++
Sbjct: 124 MRALIVTQDASIIIGKGGSHVNEIREKSGARITVSESIPGNPERILNVTGP--------- 174
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ G+LIGK G +K IQEA
Sbjct: 175 -LDAVAKAFGLIVRQINDEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEA 233
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S ++ +E L +RV+ V G A +H A +G+ L
Sbjct: 234 SGA--KLHASEGL--LPGSTERVLNVSGVADAIHIATYYVGNSL 273
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQ 459
VT + IP S +IG AG+ I I+ +SGA + E +PG E + +SG A +
Sbjct: 205 VTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGL-LPGSTERVLNVSGVADAIH 263
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A + N + + PS + AS Q P AS PP+ P
Sbjct: 264 IATYYVGNSLLN-SHPSYSSTHASYKQQRRPMASTTYYPPNTP 305
>gi|389748653|gb|EIM89830.1| hypothetical protein STEHIDRAFT_118925 [Stereum hirsutum FP-91666
SS1]
Length = 304
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 1 MRCLIVTQDASIIIGKAGSHVNEIREKSGARVMVSESIPGNPERILNVSGP--------- 51
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGKQG +K IQ+A
Sbjct: 52 -LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDA 110
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S R+ +E + +RV+ V G A +H A IG+ L
Sbjct: 111 SGA--RLNASEGM--LPGSTERVLSVAGVADAIHIATYYIGNIL 150
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---------- 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D ++ S + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 124 RESTGSQVQVAG 135
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT-------- 68
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D +S S K V+ +L+VPASQ GSLIGK G +K I
Sbjct: 69 --DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 126
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 127 RESTGAQVQVAG 138
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 124 PGWPG------ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
PG+PG S + +P +G IIGR+G I +I + + A+IKI + G+ ER V
Sbjct: 265 PGFPGLDATTPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQV 324
Query: 178 MIS 180
I+
Sbjct: 325 TIT 327
>gi|187763149|ref|YP_001876624.1| hypothetical chloroplast RF1 [Welwitschia mirabilis]
gi|163311679|gb|ABY26837.1| hypothetical chloroplast RF1 [Welwitschia mirabilis]
Length = 2659
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 21 PENQEV-ENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTKEQVTEDQLTEDQVPEDHVP 79
P++ E+ ++++P YE+P+YE+P+ P ++P ++P+S++ ++ + ++ + ++P+ +P
Sbjct: 2029 PKSYEIPDSEIPDYEIPDYEIPDSPDSEIPDSEIPDSEIPDSEIPDSEIPDSEIPDSEIP 2088
Query: 80 EDQVPEDHVPEDQVPEDIVPEDSQLQEKQENE 111
+ P+ +P+ + P+ +P DS+ + ++E
Sbjct: 2089 DS--PDYEIPDSETPDSEIP-DSERPDSPDSE 2117
Score = 61.6 bits (148), Expect = 9e-07, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 19 QIPENQEVENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTKEQVTEDQLTEDQVPEDHV 78
+IP+++ + ++P YE+P+ E+P ++P ++P+S++ ++ + ++ + ++P+
Sbjct: 2033 EIPDSEIPDYEIPDYEIPDSPDSEIPDSEIPDSEIPDSEIPDSEIPDSEIPDSEIPDS-- 2090
Query: 79 PEDQVPEDHVPEDQVPEDIVPE 100
P+ ++P+ P+ ++P+ P+
Sbjct: 2091 PDYEIPDSETPDSEIPDSERPD 2112
Score = 48.5 bits (114), Expect = 0.007, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
Query: 14 NHDLEQIPENQEVENQVPGYEVPEYEVP--EVPQEQVPQEQVPES---QVTKEQVTEDQL 68
++++ P+++ ++++P E+P+ E+P E+P ++P ++P+S ++ + + ++
Sbjct: 2046 DYEIPDSPDSEIPDSEIPDSEIPDSEIPDSEIPDSEIPDSEIPDSPDYEIPDSETPDSEI 2105
Query: 69 TEDQVPED--------HVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQEN 110
+ + P+ P+ + P+ P+ ++P +P+ + KQ++
Sbjct: 2106 PDSERPDSPDSETPDFGTPDFETPDFETPDSEIPGSNLPKQLPKKRKQKS 2155
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 25/189 (13%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 104 VVCTKRINTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 163
Query: 173 TERAVMISAKEEPESS-----------LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK 221
TER ++ E ++ +P AM +V+ L ++ P
Sbjct: 164 TERVCLVQGTAEALNAAHSFIAEKVREIPQAM-----TKPEVVNILQPQTTMNPDRAK-- 216
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
KL+VP S AG +IGK G TVK++ E S V++ P +RVV V G+
Sbjct: 217 -QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPE 272
Query: 282 GVHKAMELI 290
VHKA+ I
Sbjct: 273 QVHKAVSAI 281
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ +++GSIIG+KGE +K+I E++ ARI I +G + E +++
Sbjct: 25 LRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEG------------SCPERITTITG 72
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSG-TGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ D + R I L+ D G + G+ V+ +L++PASQ GSLIGK G ++ I+
Sbjct: 73 STDAVFRAVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGAKIREIR 132
Query: 249 EASNCIVRVLG 259
E++ V+V G
Sbjct: 133 ESTGAQVQVAG 143
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 21/127 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTTERAVMISAKEEPESSLP 190
R+++PA + GS+IG+ G I++I E T A++++ D P +TERAV +S +P
Sbjct: 108 LRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSG-------VP 160
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
D +++ ++I LD S + S + LVP G +IG+ G + I++
Sbjct: 161 ---DTIIQCVRQIC--LDPSSQSS--------SQEFLVPNDLIGCIIGRHGSKISEIRQM 207
Query: 251 SNCIVRV 257
S +++
Sbjct: 208 SGAHIKI 214
>gi|388854780|emb|CCF51673.1| related to PBP2-PAB1 binding protein [Ustilago hordei]
Length = 446
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ IIG+ G+ I +I +++ AR+ I + PG ER + +S
Sbjct: 142 MRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSG---------- 191
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G K V+ + +VP S+ GS+IGKQG +K IQEA
Sbjct: 192 PLDAVSKAFGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEA 251
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S R+ E + +RV+ + G A VH A+ +G+ L
Sbjct: 252 SGA--RLTAGEAM--LPGSTERVLSISGVADAVHIAVYYVGTIL 291
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 117 GSTEKKWPGWP------GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LD 167
G+T+ G+P GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D
Sbjct: 162 GTTQAVPDGYPDVANEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 221
Query: 168 GPPGTTERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGK 221
PGTTER ++ E +++ + +R +V+ L ++ P
Sbjct: 222 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-- 279
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
KL+VP S AG +IGK G TVK++ E S V++ P +RVV V G+
Sbjct: 280 -QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPE 335
Query: 282 GVHKAMELI 290
VHKA+ I
Sbjct: 336 QVHKAVSAI 344
>gi|312380039|gb|EFR26147.1| hypothetical protein AND_07973 [Anopheles darlingi]
Length = 552
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 26/171 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
F+ LVP+ G+IIG+ GE I + ++ AR+K+ D PGTTER +IS
Sbjct: 43 FKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKSHDFYPGTTERVCLISG------- 95
Query: 189 LPPAMDGLLRVHKRIVDGLDS--DSSHAPSGTGGKVS------TKLLVPASQAGSLIGKQ 240
+DG+L V I+D + D + A + K + K+LVP S AG +IGK
Sbjct: 96 ---TVDGILTVLDFIIDKIREKPDMTKALTEADAKQAQERDKQVKILVPNSTAGMIIGKA 152
Query: 241 GGTVKSIQEASNCIVRVLGA-EDLPVFALQDDRVVEVVGDASGVHKAMELI 290
G +K I+E S V++ +DL + +R + ++G+ A ++I
Sbjct: 153 GAYIKQIKEESGSYVQISQKPKDLTL----QERCITIIGEKENNKVACKMI 199
>gi|346716112|ref|NP_001231214.1| far upstream element (FUSE) binding protein 3 [Sus scrofa]
gi|336390571|gb|AEI54345.1| far upstream element binding protein 3 [Sus scrofa]
Length = 548
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 154/399 (38%), Gaps = 66/399 (16%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 136
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G +LL+PAS+ G +IGK G T+K +QE + +
Sbjct: 137 AKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKM 196
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-------------------- 295
++ LP A D+ + + GD V A E++ +R
Sbjct: 197 VMIQDGPLPTGA---DKPLRITGDPFKVQVAREMVLEIIREKDQADFRGVRGDFSSRMGG 253
Query: 296 --------KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+F V I EM ++ N I + P G+ P Q
Sbjct: 254 GSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 303
Query: 348 M-PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
M PP R + + ++L + Q G + TP I ++T
Sbjct: 304 MGPPDRCQHAAHVISEL--ILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEIT--Y 359
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQ 463
+P VIG G +I I + SGA V +Q PG I G Q++ A+
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLRVFTIRGVPQQIEVARH 419
Query: 464 LIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
LI + + +GA G +P++ PP+ P
Sbjct: 420 LIDEKVGGSG------LGAPGAFGQSPFS----QPPAAP 448
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAK-EEPE 186
++ +L+PA KVG +IG+ GE IK++ E T + + I DGP P ++ + I+ + +
Sbjct: 163 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ ++ + + G+ D S G S ++ VP G +IG+ G +K
Sbjct: 223 VAREMVLEIIREKDQADFRGVRGDFSSRMGGG----SIEVSVPRFAVGIVIGRNGEMIKK 278
Query: 247 IQE 249
IQ
Sbjct: 279 IQN 281
>gi|161078118|ref|NP_001036691.1| pasilla, isoform I [Drosophila melanogaster]
gi|113194762|gb|ABI31151.1| pasilla, isoform I [Drosophila melanogaster]
Length = 519
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 73 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 132
Query: 183 EEPESSLPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E + + +R + +IVD DS + K+LVP S AG +IG
Sbjct: 133 TEAIMVVMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIG 186
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 187 KGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 239
>gi|358334721|dbj|GAA27863.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 759
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 23/169 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
++L+P+ G++IG+ GE I KI ++T ++KI + PGTTER +I
Sbjct: 40 LKVLIPSIAAGAVIGKYGEAIGKIQKDTNTKVKISKQDEFYPGTTERVCLIVG------- 92
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG-GKVS------TKLLVPASQAGSLIGKQG 241
+M+G++ VH I+D + P T G+++ K+LVP S AG +IGK G
Sbjct: 93 ---SMEGVMSVHNYIMDRILEKPDPNPHATCEGRLNVERHKQVKILVPNSTAGMVIGKGG 149
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
++ I+E + V++ ++ F L +R + + GD A++LI
Sbjct: 150 SYIQEIKEKTGAYVQI--SQKSREFNLL-ERCIIIAGDLDQTRAAVQLI 195
>gi|1709303|sp|P51513.1|NOVA1_HUMAN RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Onconeural ventral antigen 1; AltName:
Full=Paraneoplastic Ri antigen; AltName: Full=Ventral
neuron-specific protein 1
gi|440878|gb|AAA16022.1| onconeural ventral antigen-1 [Homo sapiens]
Length = 510
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 109/235 (46%), Gaps = 47/235 (20%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI------LDGPPGTTERAVMIS------------------------AK 182
++ +ET A IK+ D PGTTER +I AK
Sbjct: 73 VQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAK 132
Query: 183 EEPESSLPPAMDGLLRVH-KRIVDGLDSDSSHAPSGTGGKVST------KLLVPASQAGS 235
EP S L P V+ RI L S + S ++T K++VP S AG
Sbjct: 133 TEPVSILQPQTT----VNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGL 188
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+IGK G TVK++ E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 189 IIGKGGATVKAVMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 240
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 157 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 216
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 217 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 273
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 274 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 322
>gi|260949329|ref|XP_002618961.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
gi|238846533|gb|EEQ35997.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
Length = 488
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 169/435 (38%), Gaps = 78/435 (17%)
Query: 86 DHV-PEDQVPEDIVPEDSQLQEKQENEVNLAVGSTE-----KKWPGWPGESVFRMLVPAQ 139
DH+ E E+ +PE +Q + A+GS++ KK SV RM P +
Sbjct: 65 DHILAESGQSEEPIPESQNHDGEQTSHTAEAIGSSKPISSHKKDDDASTVSV-RMYCPVK 123
Query: 140 KVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV 199
+ +++G+KGE I I E+ RI + + ER + + E + R
Sbjct: 124 EAAAVVGKKGEKITHIREKANVRIYVSENLKNVPERVISVKGSAE----------DVARA 173
Query: 200 HKRIVDGLDSDSSHAPSG-TGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVL 258
I + + P+ T + + KLLVP G +IGK G + I+E N ++
Sbjct: 174 FGLITRAILEEPEDEPASITSKQYNLKLLVPHPMVGYIIGKSGSKFREIEE--NSAAKLK 231
Query: 259 GAED-LPVFALQDDRVVEVVGDASGVHKAMELIGSHL---RKFLVDRSIIPL----FEMH 310
AE LP DRV+ V G +H A+ I S + R L II F
Sbjct: 232 AAEQALP---YSTDRVLSVTGVGDAIHIAVYYICSVMLAHRDCLKKHKIIYYNPSNFRPQ 288
Query: 311 MQMPNPQMDHIPPPQSWGPP-----------QGLPPSGGPGYGHNPQYMPPPRQAESYYP 359
+ NP M+ PQ P G P+ +G Q +P P + +
Sbjct: 289 LPAANPIMNMSIAPQQNAVPYMTGNPMQMQQMGPGPNLKDAHGSYSQ-VPKPYNFQMMFQ 347
Query: 360 PADLPPPM--EKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA---- 413
P+ P P+ I + + + HG+ ++I V QM + +S +
Sbjct: 348 PSARPQFNGPSNMPNTQIQIGAQNSFTDEHGN-------TIIGDVITQMPVQISSSPDKF 400
Query: 414 -----------DAVIGTAGASISYIRRSSGAT-----------VTIQETRGVPGEMTVEI 451
+VIG G +I IR SSG T + + +G+ + +
Sbjct: 401 SEDVFVANSNIGSVIGKGGNNIKQIRESSGCTYVKIEPDQNQSILLGGGKGLTNIRKLTL 460
Query: 452 SGTASQVQTAQQLIQ 466
+G+ + +QTA LI
Sbjct: 461 TGSYNSIQTAIYLIN 475
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 368 EKQPHQG------ISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAG 421
E Q H G A G P++ H + ST V+ +M P+ A AV+G G
Sbjct: 80 ESQNHDGEQTSHTAEAIGSSKPISSHKKDDDAST------VSVRMYCPVKEAAAVVGKKG 133
Query: 422 ASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
I++IR + + + E + VP E + + G+A V A LI + E
Sbjct: 134 EKITHIREKANVRIYVSENLKNVP-ERVISVKGSAEDVARAFGLITRAILE 183
>gi|258566349|ref|XP_002583919.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
gi|237907620|gb|EEP82021.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
Length = 366
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 151/367 (41%), Gaps = 73/367 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFI-------------KKIVEETRARIKILDGPPGTTERAV 177
R +V +++ G IIG+ G+ + K+V+ R+ + GP T +A
Sbjct: 49 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAY 108
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
+ AK E + M G+++ ++ +H +LL+ +Q G++I
Sbjct: 109 GMVAKSLLEGAPQVGMGGIIQ----------NNGTHP---------VRLLISHNQMGTII 149
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
G+QG +K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K
Sbjct: 150 GRQGLKIKYIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KC 201
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY 357
L+D Q + + P ++ + G G ++ P P
Sbjct: 202 LID---------DWQRGTGTVLYNPAVRA---------NVGGGQMNSSFLGPNPNYGGRS 243
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ-----VTQQMQIPLSY 412
Y QP G Y R H S ++T+ TQ + IP
Sbjct: 244 YNRTGNGADFSDQPSSG---YNRR-----HNSDAPNRGIPLVTEDGEEVQTQNISIPSDM 295
Query: 413 ADAVIGTAGASISYIRRSSGATVTI-QETRGVPGEMTVEISGTASQVQTAQQLI-QNFMA 470
+IG G+ IS IRRSSGA ++I + + GE I G+A + A L+ +N A
Sbjct: 296 VGCIIGRGGSKISEIRRSSGARISIAKASHDETGERMFTIMGSAQANEKALYLLYENLEA 355
Query: 471 EAAAPSQ 477
E SQ
Sbjct: 356 EKMRRSQ 362
>gi|145238284|ref|XP_001391789.1| RNA-binding protein rnc1 [Aspergillus niger CBS 513.88]
gi|134076273|emb|CAL00757.1| unnamed protein product [Aspergillus niger]
gi|350635790|gb|EHA24151.1| hypothetical protein ASPNIDRAFT_209528 [Aspergillus niger ATCC
1015]
Length = 360
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 156/366 (42%), Gaps = 69/366 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R +V +++ G IIG+ G+ + + +ET + + PG +R + ++
Sbjct: 45 LRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG---------- 94
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGTV 244
++G R + + GL AP G GG VS +LL+ +Q G++IG+QG +
Sbjct: 95 PLNGTARAYALVAKGL---LEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQGLKI 151
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 152 KHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLID---- 199
Query: 305 PLFEMHMQMPNPQMDHIPPPQS----WGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPP 360
Q + + P ++ + S G GY P Y
Sbjct: 200 -----DWQRGTGTILYNPAVRASVGTTTSTSTMNQSVGNGYNSRP------------YNR 242
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQ-----IPLSYADA 415
Q YGR + + ++ + P ++T+ +++Q IP
Sbjct: 243 TGNGADFSDQS----GGYGRRS----NPDTSNRGYP-LVTEDGEEIQTQNISIPADMVGC 293
Query: 416 VIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAA 473
+IG G+ I+ IRRSSGA ++I + GE I G+A + A L+ +N AE
Sbjct: 294 IIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKT 353
Query: 474 APSQAQ 479
SQ Q
Sbjct: 354 RRSQLQ 359
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 12 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 71
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 72 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 128
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 129 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 177
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGD 279
G+ K+L+P+ AGS+IGK G T+ +Q+ + +++ ++D + +RV V G
Sbjct: 12 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF--YPGTTERVCLVQGT 69
Query: 280 ASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQS 326
A ++ I +R E+ M P++ +I PQ+
Sbjct: 70 AEALNAVHSFIAEKVR------------EIPQAMTKPEVVNILQPQT 104
>gi|378726019|gb|EHY52478.1| hypothetical protein HMPREF1120_00690 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 147/359 (40%), Gaps = 58/359 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R +V ++ G IIG+ G+ + + EET + + G +R + ++
Sbjct: 48 LRAIVSTKEAGVIIGKAGKNVADLREETGVKAGVSKVVQGVHDRVLTVTG---------- 97
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST------KLLVPASQAGSLIGKQGGTVK 245
+ G+ + + + GL + G GG V +LL+ +Q G++IG+QG +K
Sbjct: 98 PLSGIAKAYSLVAKGLLEGAPQV--GMGGVVQNNGTHPIRLLISHNQMGTIIGRQGLKIK 155
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIP 305
IQ+ S VR++ +++ +R+VEV G G+ KA+ IG K LVD
Sbjct: 156 HIQDVSG--VRMVAQKEM--LPQSTERIVEVQGTPEGIDKAVWEIG----KCLVD----- 202
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
Q + + P + LPP+ G G Y+ R AD
Sbjct: 203 ----DWQRGTGTVLYNPAVRVQVGSGPLPPAVGGGLPAGNNYIGGGRSYNRTGNGADFS- 257
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQ-----VTQQMQIPLSYADAVIGTA 420
E+ G+ + M+T+ TQ + IP +IG
Sbjct: 258 ---------------ESRGYTRGNDLPRGGIPMVTEDGEEVQTQNISIPADMVGCIIGRG 302
Query: 421 GASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
G+ IS IR++SGA ++I + GE I G+AS + A L+ +N AE Q
Sbjct: 303 GSKISEIRKTSGARISIAKAPHDDTGERMFTIMGSASANERALYLLYENLEAEKGRRQQ 361
>gi|302916853|ref|XP_003052237.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733176|gb|EEU46524.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 154/364 (42%), Gaps = 57/364 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + I+
Sbjct: 49 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG--------- 99
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
D + R + + L AP+ G GG V + KLL+ +Q G++IG+QG
Sbjct: 100 -GCDAISRAYAIVARAL---LEGAPAMGMGGIVQSNGTHPIKLLISHNQMGTIIGRQGLK 155
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+AS VR++ +++ +R+VEV G G+ +A+ + K LVD
Sbjct: 156 IKHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIQRAVW----EICKCLVD--- 204
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
Q + + P ++ SGG GY S Y
Sbjct: 205 ------DWQRGTGTVLYNPVVRTQPASSTSVGSGGAGYSQGS--------GRSEYG---- 246
Query: 364 PPPMEKQPHQGISAYGREAPVNVHGSSNA--QSTPSMITQ----VTQQMQIPLSYADAVI 417
P + + + + G P N S+A + P+ TQ + IP +I
Sbjct: 247 SPRVMRTGNGADFSNGSSRPYNRRSDSDAAIRGPPTHDENGEEIQTQNISIPADMVGCII 306
Query: 418 GTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAP 475
G AG+ IS IR++SGA ++I + GE I GTA ++A L+ +N AE
Sbjct: 307 GRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENLEAEKMRR 366
Query: 476 SQAQ 479
SQ Q
Sbjct: 367 SQLQ 370
>gi|385305943|gb|EIF49885.1| kh domain rna binding protein [Dekkera bruxellensis AWRI1499]
Length = 541
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 150/386 (38%), Gaps = 82/386 (21%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
FRML + +++G+ GE IKKI E + ARI + D G ER + + P +
Sbjct: 158 FRMLCTISEAATVVGKGGETIKKIKELSNARINVSDNLKGVPERVISVRG---PAEYVAK 214
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A ++R+ + + L+ SS + + +LL P + G +IGK+G + I+E+S
Sbjct: 215 AFGLIVRMQ--LGEPLNVPSSLESQ----QYNLRLLFPHTIMGYIIGKKGSRFREIEESS 268
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA------------------------- 286
L A D + DRV+ + G A +H A
Sbjct: 269 AA---ALKAND-QILPASTDRVLNINGVADAIHIATYYIAQTVIEHKQQMSKAIYYNPAN 324
Query: 287 -----MELIGSHLRKF-----------LVDRSIIPL--FEMHMQMPNPQMDHIPPPQSWG 328
+ L+ S R+F + R P F M MP+ M G
Sbjct: 325 FAQPTIPLVNSSARRFQHRMMGDFRGGRMGRQFGPQPGFGPMMGMPSQMMGMYGQMSPQG 384
Query: 329 PPQGLPPSGGPG---YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVN 385
G P G G G P PP Q Y+PP P + P
Sbjct: 385 NANGQSPESGDGQSNMGRIPGGKPP--QMGGYFPPQYAP---------------QFNPAA 427
Query: 386 VHGSSNAQS-TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
V ++ A++ T ++ Q + +P + +IG G ++ IR+ +G V I + VP
Sbjct: 428 VASNTRAETVTTGADGKLNQDIFVPQKHIGLIIGRGGRNLKDIRQQTGCYVKINDE--VP 485
Query: 445 GEMTVEISGTASQ---VQTAQQLIQN 467
G +++ ++ +Q A LI N
Sbjct: 486 GSTERKLTLMSNNMYGIQNALLLINN 511
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S +++
Sbjct: 25 TIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG---TTNAIF 79
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A + + + D + P +L+VPASQ GSLIGK G +K I++
Sbjct: 80 SAFTLITKKFEEFNDVGKVGKTQIP--------IRLIVPASQCGSLIGKSGSKIKEIRQT 131
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
+ C ++V +E LP +R V + G A + + +
Sbjct: 132 TGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCI 164
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 136 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 195
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 196 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 252
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 253 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 301
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 20/162 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ P +S+
Sbjct: 19 TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---PTNSIF 73
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKV-----STKLLVPASQAGSLIGKQGGTVK 245
A + + + S GG V + +L+VPASQ GSLIGK G +K
Sbjct: 74 KAFTLICKKFEEWCSQFHDIQS------GGGVPRPPITLRLIVPASQCGSLIGKGGSKIK 127
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
I+E + ++V +E LP +R V + G + + + +
Sbjct: 128 EIREVTGASIQV-ASEMLPN---STERAVTISGTSEAITQCI 165
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI---QETRGVPGEMTVEISGTASQVQ 459
T +M +P +IG G I+ IR+ SGA + I +E G + T+ I+G V
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVA 426
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSN 501
AQ LI + A +AQ + G P A+ + PSN
Sbjct: 427 LAQYLISMSVELQKANLEAQNTQTPGSGTTPGATGASASPSN 468
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 146 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 205
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 206 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA---KQAKLIVPNSTAGLIIG 262
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 263 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 311
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGD 279
G+ K+L+P+ AGS+IGK G T+ +Q+ + +++ ++D + +RV V G
Sbjct: 146 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF--YPGTTERVCLVQGT 203
Query: 280 ASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQS 326
A ++ I +R E+ M P++ +I PQ+
Sbjct: 204 AEALNAVHSFIAEKVR------------EIPQAMTKPEVVNILQPQT 238
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 175/445 (39%), Gaps = 67/445 (15%)
Query: 51 EQVPESQVTKEQVTEDQLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQEN 110
E + S+ + + D E +D P+ Q D PE + P P D Q + + +
Sbjct: 5 ENIDRSKRPRREEDWDSENEGDNQDDRHPKRQAIPD--PETKAPH-FFPADEQQKPRNKG 61
Query: 111 EVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
++E+ G R LV + G IIG+ G+ + +I + + AR+ I D P
Sbjct: 62 YTRTVTVASEEGM--IAGNISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVP 119
Query: 171 GTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPA 230
G ER + + P S++ A L K I + ++ + P V+ K+L+ A
Sbjct: 120 GAAERILTVVG---PVSAVAKAY--ALVAEKIIEENTLAEDNKGP--IQQDVTIKILILA 172
Query: 231 SQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
++ GS+IGK G ++SIQE S V A++ P L +RVV + G + +A++ I
Sbjct: 173 NRMGSIIGKSGSVIRSIQETSGAKV---SAQEEP-LPLSTERVVTIHGTPDAIEQAVKKI 228
Query: 291 GSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQY 347
G LVD+ PN +++ + P G P S G GH Y
Sbjct: 229 GD----ILVDQ------------PNHHGNYM----LYKPIAGAAPHTSSSNHGNGHR-NY 267
Query: 348 MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREA-------PVNVHGSSNAQ------- 393
+ + G+ G + P N G S +
Sbjct: 268 RRSNDNNNAASHAMPTAAAAAMMGYSGMLPMGNMSMNGFYYPPTNYPGGSGGRQGDYPLP 327
Query: 394 -----STPSMITQVTQQM--------QIPLSYADAVIGTAGASISYIRRSSGATVTIQET 440
S SM+ ++ M IP +IG G I+ IR++SG+ + I +
Sbjct: 328 MMPGLSNLSMMGGLSNMMPATQSQQIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADP 387
Query: 441 RGVPGEMTVEISGTASQVQTAQQLI 465
E + I+GT Q A L+
Sbjct: 388 STDSHERLITITGTPESNQMALYLL 412
>gi|431898917|gb|ELK07287.1| Far upstream element-binding protein 3 [Pteropus alecto]
Length = 595
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 157/399 (39%), Gaps = 66/399 (16%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 136
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G ++L+PAS+ G +IGK G T+K +QE + +
Sbjct: 137 AKRLLGQIVDRCRNGPGFHNDIDGNSTVQEILIPASKVGLVIGKGGETIKQLQERTGVKM 196
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-----FLVDRS-------- 302
++ LP A D+ + + GD V +A E++ +R+ F RS
Sbjct: 197 VMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIREKDQADFRGIRSDFTSRMGG 253
Query: 303 -----IIPLF----------EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+P F EM ++ N I + P G+ P Q
Sbjct: 254 GSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 303
Query: 348 M-PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
M PP R + + +L + Q G + TP I ++T
Sbjct: 304 MGPPDRCQHAAHIINEL--ILTAQERDGFGGLAVARGRGRGRGDWSMGTPGGIQEIT--Y 359
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQ 463
+P VIG G +I I + SGA V +Q P I G Q++ A+
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSLRVFTIRGVPQQIEVARH 419
Query: 464 LIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
LI + A+ +GA G +P++ PP+ P
Sbjct: 420 LIDEKVGGAS------LGAPGAFGQSPFS----QPPAAP 448
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAK-EEPE 186
+V +L+PA KVG +IG+ GE IK++ E T + + I DGP P ++ + I+ + +
Sbjct: 163 TVQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ ++ + + G+ SD + S GG S ++ VP G +IG+ G +K
Sbjct: 223 QAREMVLEIIREKDQADFRGIRSDFT---SRMGGG-SIEVSVPRFAVGIVIGRNGEMIKK 278
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
IQ + VR+ + P + +R +V+G A +I
Sbjct: 279 IQNDAG--VRI---QFKPDDGISPERAAQVMGPPDRCQHAAHII 317
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 134/324 (41%), Gaps = 63/324 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
RMLVP Q VG+IIG++G+ I+ + ++T ++I I G E+ + I + E S+
Sbjct: 197 LRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSSN-- 254
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A ++ + ++ + +D+ + ++ K+LV + G LIGK+G +K I++
Sbjct: 255 -ACRTIMEIMQK--EAIDTKFTE-------EIPLKILVHNNFVGRLIGKEGRNLKKIEQD 304
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL V+ +R + V G +A E + +R+ +E
Sbjct: 305 TGTKITISSLQDLTVY--NPERTITVKGAIENCGRAEEEVMKKIRE---------AYESD 353
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
+ N Q + IP GL PSG PG G + +PPP
Sbjct: 354 VAAMNLQSNLIPGLNLNA--LGLFPSGTPGMGPSMSSLPPP------------------G 393
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
H G S G VH + IP A+IG G I +
Sbjct: 394 AHGGYSFGGNPESETVH------------------LFIPTLAVGAIIGKQGQHIKQLSHF 435
Query: 431 SGATVTIQETRGV-PGEMTVEISG 453
+GA++ I G+ P V I G
Sbjct: 436 AGASIKIAPAEGMDPKHRMVIIVG 459
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAK 182
+ G P + +P VG+IIG++G+ IK++ A IKI G + M+
Sbjct: 400 FGGNPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKIAPA-EGMDPKHRMVIIV 458
Query: 183 EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGG 242
PE+ + RI L ++ P K+ + VP+ AG +IGK G
Sbjct: 459 GPPEAQ--------FKAQCRIFGKLKEENFFGPK-EEVKLEAHIKVPSFAAGRVIGKGGK 509
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
TV +Q + C V+ + P +D +V+++G A I
Sbjct: 510 TVNELQNLT-CAEVVVPRDQTP--DEKDQVIVKIIGHFFACQLAQRKI 554
>gi|336469496|gb|EGO57658.1| hypothetical protein NEUTE1DRAFT_116898 [Neurospora tetrasperma
FGSC 2508]
gi|350290860|gb|EGZ72074.1| hypothetical protein NEUTE2DRAFT_144709 [Neurospora tetrasperma
FGSC 2509]
Length = 371
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 154/364 (42%), Gaps = 67/364 (18%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + I+ + S
Sbjct: 51 TLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDAVSKAY 110
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
V + +++G APS G GG +S KLL+ +Q G++IG+QG
Sbjct: 111 AV------VARSLLEG-------APSVGMGGVISANGTHPIKLLISHNQMGTVIGRQGLK 157
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR-- 301
+K IQ+ S VR++ +++ +RVVEV G G+ +A+ I K LVD
Sbjct: 158 IKHIQDVSG--VRMVAQKEM--LPQSTERVVEVQGTPEGIQRAVWEIC----KCLVDDWQ 209
Query: 302 ----SII--PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
+++ P+ Q P + P +S+G + G + N P R+++
Sbjct: 210 RGTGTVLYNPVVRGGGQ-PLGGDRNYPQERSYGSSRVTRTGNGADFSSNSGGRPYNRRSD 268
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
S A PP + + + TQ + IP
Sbjct: 269 S--DAASRGPPTHDENGEELQ--------------------------TQNISIPADMVGC 300
Query: 416 VIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAA 473
+IG G IS IR++SGA ++I + GE I G+A +TA L+ +N AE
Sbjct: 301 IIGRQGTKISEIRKASGARISIAKGPHDESGERMFTIMGSAKANETALYLLYENLEAEKT 360
Query: 474 APSQ 477
SQ
Sbjct: 361 RRSQ 364
>gi|308499839|ref|XP_003112105.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
gi|308268586|gb|EFP12539.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
Length = 721
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 148/361 (40%), Gaps = 58/361 (16%)
Query: 133 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPA 192
R+LV ++ G+IIG+ GE IK++ E A +++ D T ER ++A E ++ L
Sbjct: 375 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDS--NTPERVCTVTADE--KTVLNIL 430
Query: 193 MDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASN 252
D L R+ D+ S P ++L+ S AG+LIG+ G +K ++E
Sbjct: 431 RDVLPRLE-------DNFSERDPC------EVRMLIHQSHAGALIGRNGTKIKELRE--K 475
Query: 253 CIVRVLGAEDLPVFA----LQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF- 307
C R L +F DRV+ G+ V +E + L++ + S P
Sbjct: 476 CSAR------LKIFTGCAPGSTDRVLITSGEQKNVLAIIEEVMKELKEIPIKGSSTPYLP 529
Query: 308 EMHMQMPN-PQMDHIPPPQSWGPPQG----LPPSGGPG-YGHNPQY-------MPPPRQA 354
H N + P S G PQ PP GG G G Y PR
Sbjct: 530 SFHYDPSNISEYGGFPGNLSSGGPQNSRGPAPPRGGQGPAGGQRSYGGGAITPGGGPRSF 589
Query: 355 ESY---------YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQ 405
ES P + P P QG +G AP N + T
Sbjct: 590 ESGDFQQFRGGPMPGYAMNAP-GYAPQQG--QFG--APANAGYGYGPGGGGPVTTAQVSF 644
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
+ IP +IG G I+ IR+ SGA +T++ + G P E + I GT Q+ +AQ L+
Sbjct: 645 VTIPSDLGGTIIGRGGERIARIRQESGAQITLEPSTGQP-ERIITIKGTEPQIHSAQYLL 703
Query: 466 Q 466
Q
Sbjct: 704 Q 704
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 24/117 (20%)
Query: 72 QVPEDHVPED--QVPEDHVPEDQVPEDIVPE-DSQLQEKQENEVNLAVGSTEKKWPGWPG 128
QVP+ + PE V D + D++P + E+ EV
Sbjct: 406 QVPDSNTPERVCTVTADEKTVLNILRDVLPRLEDNFSERDPCEV---------------- 449
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEE 184
RML+ G++IGR G IK++ E+ AR+KI G PG+T+R ++ S +++
Sbjct: 450 ----RMLIHQSHAGALIGRNGTKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQK 502
>gi|403264854|ref|XP_003924682.1| PREDICTED: RNA-binding protein Nova-1 [Saimiri boliviensis
boliviensis]
Length = 595
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 96/204 (47%), Gaps = 33/204 (16%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTT 173
GST++ G G+ ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTT
Sbjct: 125 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 184
Query: 174 ERAVMIS------------------------AKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
ER +I AK EP S L P K+ + +
Sbjct: 185 ERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPT 244
Query: 210 DSSHAPS---GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
+ +PS T K++VP S AG +IGK G TVK+I E S V++ D
Sbjct: 245 TTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD--GI 302
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 303 NLQ-ERVVTVSGEPEQNRKAVELI 325
>gi|390177070|ref|XP_003736272.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
gi|388858896|gb|EIM52345.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
Length = 800
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 260 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 319
Query: 183 EEP-ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
E L MD + +D++S K+LVP S AG +IGK G
Sbjct: 320 TEAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQER---DKQVKILVPNSTAGMIIGKGG 376
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
+K I+E S V++ ++ +LQ +R + ++GD A ++I S +
Sbjct: 377 AFIKQIKEDSGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSKI 426
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 16/132 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I DG + ER V I+ E
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISDG--SSPERIVTITGASEV------ 70
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + I + + D +S S + V+ +L+ PASQ GSLIGK G +K I
Sbjct: 71 ----IFKAFAMIAEKFEEDILASMINSTVTSRPPVTLRLVFPASQCGSLIGKGGSKIKEI 126
Query: 248 QEASNCIVRVLG 259
+E++ V+V G
Sbjct: 127 RESTGAQVQVAG 138
>gi|146197849|dbj|BAF57636.1| hnRNP K protein [Dugesia japonica]
Length = 337
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 139/352 (39%), Gaps = 51/352 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD--GPPGTTERAVMISAKEEPESSL 189
R L+P++ GS+IG+ GE I+ + ARI I D GP ER + SL
Sbjct: 22 LRFLIPSKAAGSVIGKSGENIRNLRRMFMARINISDNSGP----ERIL----------SL 67
Query: 190 PPAMDGLLRVHKRIVDGLDSDSSHAPSGTG------GKVSTKLLVPASQAGSLIGKQGGT 243
+D +L + + ++ ++ +G+G V ++LV S G+LIG+ GG
Sbjct: 68 EADLDTILEILTQCLEKMEGCIPLPRAGSGDCNDSINHVDLRMLVNQSLVGALIGRGGGR 127
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+ ++E C +RVL V DR+V++VG + ++ IG
Sbjct: 128 INDLREK--CDLRVLKVYQ-TVCPDSTDRIVQLVG---AIPLVIDCIG------------ 169
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD 362
+ +M + P + P+ Q + YG Q + P +
Sbjct: 170 -KIVDMCKETP------VREPKVNYDAQNYDHAAANHYGGWAQNAIRPNNNLTTRSLGFS 222
Query: 363 LPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT---QQMQIPLSYADAVIGT 419
P ++ Q Y P N + Q Q++++P A+IG
Sbjct: 223 RPGFLKHQASYKNEHYDYSYPNNYREMDTSFRNSHYDEQDNNEVQEIRLPHKVVGAIIGP 282
Query: 420 AGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
G+ I +R SGA +TI P E V ISG V+ A +I + +
Sbjct: 283 GGSRIQQVRMDSGAHITISSPDRNPQERVVTISGNTQDVKRAFSMINECLGK 334
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 65 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 124
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 125 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 181
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 182 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 230
>gi|24645368|ref|NP_731355.1| pasilla, isoform D [Drosophila melanogaster]
gi|23170799|gb|AAN13428.1| pasilla, isoform D [Drosophila melanogaster]
Length = 583
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 73 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 132
Query: 183 EEPESSLPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E + + +R + +IVD DS + K+LVP S AG +IG
Sbjct: 133 TEAIMVVMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIG 186
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 187 KGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 239
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 2 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 61
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 62 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 118
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 119 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 167
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 4 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 63
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 64 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 120
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 121 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 169
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 133/337 (39%), Gaps = 64/337 (18%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTER 175
GS++ + +P R+LVP Q VG+IIG++G IK I ++T++R+ I G E+
Sbjct: 206 GSSQARQIDFP----LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEK 261
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
V I A E S A +L + ++ D + ++ K+L G
Sbjct: 262 PVTIHATPEGTSE---ACRMILEIMQKEAD---------ETKLAEEIPLKILAHNGLVGR 309
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGK+G +K I+ + + + +DL ++ +R + V G A I LR
Sbjct: 310 LIGKEGRNLKKIEHETGTKITISSLQDLSIY--NPERTITVKGTVEACANAEIEIMKKLR 367
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQ-------SWGPPQGLPPSGGPGYGHNPQYM 348
+ FE M N Q + IP S G PP+G G P Y
Sbjct: 368 E---------AFENDMLAVNQQANLIPGLNLSALGIFSTGLSMLPPPAGPRGVPPAPPYH 418
Query: 349 PPPRQA---ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQ 405
P + S YPP P PH +Y + VN+
Sbjct: 419 PFATHSGYFSSLYPPHQFSP----FPHH--HSYPEQEIVNLF------------------ 454
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRG 442
IP A+IG GA I + R +GA++ I G
Sbjct: 455 --IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG 489
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 445 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 501
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 502 -----PP--EAQFKAQGRIFGKLKEENFFNPKEEV-KLEAHIRVPSSTAGRVIGKGGKTV 553
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 554 NELQNLTSAEVIV 566
>gi|51092069|gb|AAT94448.1| RE39088p [Drosophila melanogaster]
Length = 563
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 117 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 176
Query: 183 EEPESSLPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E + + +R + +IVD DS + K+LVP S AG +IG
Sbjct: 177 TEAIMVVMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIG 230
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 231 KGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 283
>gi|24645366|ref|NP_731354.1| pasilla, isoform B [Drosophila melanogaster]
gi|11526802|gb|AAG36787.1|AF220420_1 PASILLA splice variant 1 [Drosophila melanogaster]
gi|11526804|gb|AAG36788.1|AF220421_1 PASILLA splice variant 2 [Drosophila melanogaster]
gi|23170798|gb|AAN13427.1| pasilla, isoform B [Drosophila melanogaster]
Length = 475
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 29 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 88
Query: 183 EEPESSLPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E + + +R + +IVD DS + K+LVP S AG +IG
Sbjct: 89 TEAIMVVMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIG 142
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 143 KGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 195
>gi|161078122|ref|NP_001036695.1| pasilla, isoform K [Drosophila melanogaster]
gi|320542560|ref|NP_001189201.1| pasilla, isoform P [Drosophila melanogaster]
gi|320542562|ref|NP_001189202.1| pasilla, isoform M [Drosophila melanogaster]
gi|113194763|gb|ABI31152.1| pasilla, isoform K [Drosophila melanogaster]
gi|318068745|gb|ADV37292.1| pasilla, isoform P [Drosophila melanogaster]
gi|318068746|gb|ADV37293.1| pasilla, isoform M [Drosophila melanogaster]
Length = 550
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 40 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 99
Query: 183 EEPESSLPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E + + +R + +IVD DS + K+LVP S AG +IG
Sbjct: 100 TEAIMVVMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIG 153
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 154 KGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 206
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 3 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 62
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 63 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 119
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 120 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 168
>gi|336367212|gb|EGN95557.1| hypothetical protein SERLA73DRAFT_186638 [Serpula lacrymans var.
lacrymans S7.3]
Length = 370
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 70 MRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGP--------- 120
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGKQG +K IQ+A
Sbjct: 121 -LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDA 179
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S R+ +E + +RV+ V G A +H A IG+ L
Sbjct: 180 SGA--RLNASEGM--LPGSTERVLSVAGVADAIHIATYYIGNIL 219
>gi|444728868|gb|ELW69310.1| RNA-binding protein Nova-1 [Tupaia chinensis]
Length = 482
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 98/208 (47%), Gaps = 41/208 (19%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTT 173
GST++ G G+ ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTT
Sbjct: 11 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 70
Query: 174 ERAVMIS------------------------AKEEPESSLPPAMDGLLRVH-KRIVDGLD 208
ER +I AK EP S L P V+ RI L
Sbjct: 71 ERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTT----VNPDRIKQTLP 126
Query: 209 SDSSHAPSGTGGKVST------KLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAED 262
S + S ++T K++VP S AG +IGK G TVK+I E S V++ D
Sbjct: 127 SSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 186
Query: 263 LPVFALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 187 --GINLQ-ERVVTVSGEPEQNRKAVELI 211
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 165/387 (42%), Gaps = 63/387 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 356 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 415
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 416 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 462
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G KA E I +R+
Sbjct: 463 KKIEQDTDTKITISPLQELTLY--NPERTITVKGSVETCAKAEEEIMKKIRESYENDIAS 520
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP-------------------SG 337
+ +IP ++ P +PPP S GPP +PP S
Sbjct: 521 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAMPPYPQFEQSETETVHLFIPALSV 579
Query: 338 GPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVHG 388
G G Q++ + A PA+ P + P A GR ++G
Sbjct: 580 GAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IYG 634
Query: 389 SSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVP 444
++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 635 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDEN 694
Query: 445 GEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 695 DQVVVKITGHFYACQVAQRKIQEILTQ 721
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 19/159 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG---------- 73
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ + I + S G GK + +L+VPASQ GSLIGK G +K I+
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
+ + C ++V +E LP +R V + G A + + +
Sbjct: 134 QTTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCI 168
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 19/159 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG---------- 73
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ + I + S G GK + +L+VPASQ GSLIGK G +K I+
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
+ + C ++V +E LP +R V + G A + + +
Sbjct: 134 QTTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCI 168
>gi|147861582|emb|CAN81461.1| hypothetical protein VITISV_025302 [Vitis vinifera]
Length = 1258
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Query: 464 LIQNFMAEAAAPSQAQMGASADQGYNPYA---SMYGSPPSNPGHAGHAGGYGSVYGSNYG 520
L NFMAEAAAP+QAQ G SAD GYN YA SMY SP SNP HA H GGYG V G+NYG
Sbjct: 1198 LTHNFMAEAAAPAQAQTGGSADPGYNSYAAHGSMYASPASNPAHASHTGGYGPVNGANYG 1257
Query: 521 Y 521
Y
Sbjct: 1258 Y 1258
>gi|161078112|ref|NP_001036692.1| pasilla, isoform F [Drosophila melanogaster]
gi|164449760|ref|NP_731351.3| pasilla, isoform H [Drosophila melanogaster]
gi|164449762|ref|NP_731352.3| pasilla, isoform G [Drosophila melanogaster]
gi|320542556|ref|NP_001189199.1| pasilla, isoform N [Drosophila melanogaster]
gi|320542564|ref|NP_001189203.1| pasilla, isoform O [Drosophila melanogaster]
gi|11526806|gb|AAG36789.1|AF220422_1 PASILLA splice variant 3 [Drosophila melanogaster]
gi|158030195|gb|AAF54377.3| pasilla, isoform F [Drosophila melanogaster]
gi|158030196|gb|AAN13425.2| pasilla, isoform G [Drosophila melanogaster]
gi|158030197|gb|AAN13424.2| pasilla, isoform H [Drosophila melanogaster]
gi|318068743|gb|ADV37290.1| pasilla, isoform N [Drosophila melanogaster]
gi|318068747|gb|ADV37294.1| pasilla, isoform O [Drosophila melanogaster]
Length = 572
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 62 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 183 EEPESSLPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E + + +R + +IVD DS + K+LVP S AG +IG
Sbjct: 122 TEAIMVVMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIG 175
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 176 KGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 228
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 3 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 62
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 63 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 119
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 120 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 168
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 25/177 (14%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 115 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 174
Query: 185 PESS-----------LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQA 233
++ +P AM +V+ L ++ P KL+VP S A
Sbjct: 175 ALNAAHSFIAEKVREIPQAM-----TKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTA 226
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
G +IGK G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 227 GLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 280
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGD 279
G+ K+L+P+ AGS+IGK G T+ +Q+ + +++ ++D + +RV V G
Sbjct: 115 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF--YPGTTERVCLVQGT 172
Query: 280 ASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQS 326
A ++ A I +R E+ M P++ +I PQ+
Sbjct: 173 AEALNAAHSFIAEKVR------------EIPQAMTKPEVVNILQPQT 207
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 122/309 (39%), Gaps = 44/309 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G IK I ++T++R+ I G E+ V I A P
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT-------P 179
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
R+ I+ D+ A +V K+L G LIGK+G +K I+
Sbjct: 180 EGTSEACRMILEIMQKEAEDTKLAE-----EVPLKILAHNGLVGRLIGKEGRNLKKIEHE 234
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G A I LR+ FE
Sbjct: 235 TGTKITISSLQDLSIY--NPERTITVKGTIDACANAEMEIMKKLRE---------AFEND 283
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
M N Q + IP GL S + +PPP P +PP +
Sbjct: 284 MLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPP------AGPRGVPPSVPYH 328
Query: 371 PHQGISAY--GREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
P S Y + + S P Q T + IP A+IG GA I +
Sbjct: 329 PFASHSGYFPNMYPHHHFGPFPHHHSYPE---QETVNLFIPTQAVGAIIGKKGAHIKQLA 385
Query: 429 RSSGATVTI 437
R +GA++ I
Sbjct: 386 RFAGASIKI 394
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 28/151 (18%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 355 YPEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 411
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 412 -----PP--EAQFKAQGRIFGKLKEENFFNPKEEV-KLEAHIRVPSSTAGRVIGKGGKTV 463
Query: 245 KSIQ----------------EASNCIVRVLG 259
+Q E + IVR++G
Sbjct: 464 NELQNLTSAEVIVPRDQTPDENAEVIVRIIG 494
>gi|47220208|emb|CAF98973.1| unnamed protein product [Tetraodon nigroviridis]
Length = 345
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 17/130 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
D + + I + D ++ S + V+ +L+VPASQ GSLIGK G +K +
Sbjct: 68 --DTIFKAFAMIAYKFEEDIINSMSNSLATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 248 QEAS-NCIVR 256
+EA C+++
Sbjct: 126 REAELLCVIK 135
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 81/160 (50%), Gaps = 20/160 (12%)
Query: 139 QKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLR 198
Q+VGSIIG+KGE +KKI EE+ ARI I +G + ER V I+ A + + R
Sbjct: 6 QEVGSIIGKKGETVKKIREESGARINISEG--SSPERIVTITG----------ATEAIFR 53
Query: 199 VHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCI 254
I + D + A S + V+ +L+ P SQ GSLIGK G +K I+E +
Sbjct: 54 TFAMIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQ 113
Query: 255 VRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
V+V G + LP +R V + G + + + I S +
Sbjct: 114 VQVAG-DMLPD---STERAVTISGTPQAITQCVRHICSVM 149
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 56 SQVTKEQVTEDQLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLA 115
S + K+ T ++ E+ ++ E PE V E I + + +K E ++N A
Sbjct: 10 SIIGKKGETVKKIREESGARINISEGSSPERIVTITGATEAIFRTFAMIAQKFEEDINAA 69
Query: 116 VGSTE--KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGT 172
+ ++ K P R++ P + GS+IG+ G IK+I E T A++++ D P +
Sbjct: 70 MSNSNVTSKPP-----VTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDS 124
Query: 173 TERAVMIS 180
TERAV IS
Sbjct: 125 TERAVTIS 132
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 125 GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISA 181
G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++
Sbjct: 36 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG 95
Query: 182 KEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
E +++ + +R +V+ L ++ P KL+VP S AG
Sbjct: 96 TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGL 152
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+IGK G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 153 IIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 204
>gi|156051102|ref|XP_001591512.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980]
gi|154704736|gb|EDO04475.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 371
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 147/358 (41%), Gaps = 49/358 (13%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + IS
Sbjct: 51 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTISG--------- 101
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
D + R + + L AP G GG VS KLL+ +Q G++IG+QG
Sbjct: 102 -GCDSISRAYSIVAKAL---LEGAPQMGMGGVVSNNGTHPIKLLISHNQMGTIIGRQGLK 157
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+ S VR++ +++ +R+VEV G+ G+ KA+ + K LVD
Sbjct: 158 IKHIQDVSG--VRMVAQKEM--LPQSTERIVEVQGNPEGIQKAVW----EICKCLVDDWA 209
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
+ + NP + S G QG GG G + + + A
Sbjct: 210 RGTGTV---LYNPVV-RTQTGGSGGMSQG--NLGGTGREYGSSRVMRTGNGADFSEGA-- 261
Query: 364 PPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGAS 423
P A R P + Q TQ + IP +IG AG+
Sbjct: 262 --PRSYNRRSDSDAAQRGPPTHDENGEELQ---------TQNISIPSDMVGCIIGRAGSK 310
Query: 424 ISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQAQ 479
IS IR++SGA ++I ++ GE I GTA +A L+ +N AE SQ
Sbjct: 311 ISEIRKTSGARISIAKSPHDETGERMFTIMGTAKANDSALYLLYENLEAEKQRRSQGN 368
>gi|398397391|ref|XP_003852153.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
gi|339472034|gb|EGP87129.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
Length = 362
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 158/367 (43%), Gaps = 74/367 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R +V +++ G IIG+ G+ + + ++T R + PG +R + ++
Sbjct: 43 LRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTG---------- 92
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGTV 244
A+ G+ + + D L AP G GG V + +LL+ +Q G++IG+QG +
Sbjct: 93 ALTGIADAYGLVADSL---VKGAPQMGMGGVVGSPNTHPIRLLISHNQMGTIIGRQGLKI 149
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDR--- 301
K IQ+AS VR++ +++ +R+VEV G G+ K++ IG K L+D
Sbjct: 150 KQIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIQKSVWEIG----KCLIDDEQR 201
Query: 302 ---SIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPS-GGPGYGHNPQYMPPPRQAESY 357
+++ + +Q P + P +G G P S G G + P S
Sbjct: 202 GYGTVLYSPAVRVQGGAPPAINGASPVGFG--GGAPRSFARTGNGADFTSGAPA----SS 255
Query: 358 YPP-----ADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSY 412
YPP +D PP PV V + Q TQ + IP
Sbjct: 256 YPPRRNGGSDAGPP----------------PV-VEDGEDIQ---------TQNISIPADM 289
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMA 470
+IG G+ IS IR+SSGA ++I + GE I+G S + A L+ +N A
Sbjct: 290 VGCIIGRGGSKISEIRKSSGARISIAKAPHDESGERMFTITGGPSANEKALYLLYENLEA 349
Query: 471 EAAAPSQ 477
E SQ
Sbjct: 350 EKMRRSQ 356
>gi|336379931|gb|EGO21085.1| hypothetical protein SERLADRAFT_398361 [Serpula lacrymans var.
lacrymans S7.9]
Length = 304
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 4 MRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSG---------- 53
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGKQG +K IQ+A
Sbjct: 54 PLDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDA 113
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S R+ +E + +RV+ V G A +H A IG+ L
Sbjct: 114 SGA--RLNASEGM--LPGSTERVLSVAGVADAIHIATYYIGNIL 153
>gi|195107855|ref|XP_001998509.1| GI24011 [Drosophila mojavensis]
gi|193915103|gb|EDW13970.1| GI24011 [Drosophila mojavensis]
Length = 574
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 32/183 (17%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
G++ F M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 62 GDTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITG- 120
Query: 183 EEPESSLPPAMDGLLRVHKRIVDGL-----------DSDSSHAPSGTGGKVSTKLLVPAS 231
+++G++ V I+D + D++S A K+LVP S
Sbjct: 121 ---------SVEGIMTVVDFIMDKIREKPDLTTKIIDAESKQAQER---DKQVKILVPNS 168
Query: 232 QAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIG 291
AG +IGK G +K I+E S V++ ++ +LQ +R + ++GD A ++I
Sbjct: 169 TAGMIIGKGGAFIKQIKEESGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMIL 225
Query: 292 SHL 294
S +
Sbjct: 226 SKI 228
>gi|170048061|ref|XP_001851517.1| nova [Culex quinquefasciatus]
gi|167870269|gb|EDS33652.1| nova [Culex quinquefasciatus]
Length = 534
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 24/174 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
F+ LVP+ G+IIG+ GE I + ++ AR+K+ D PGT+ER +IS
Sbjct: 29 FKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTSERVCLISG------- 81
Query: 189 LPPAMDGLLRVHKRIVDGLDS--DSSHAPSGTGGKVS------TKLLVPASQAGSLIGKQ 240
+DG+L V I+D + D + A + K + K+LVP S AG +IGK
Sbjct: 82 ---TVDGILTVLDFIIDKIREKPDMTKALTEADAKQAAERDKQVKVLVPNSTAGMIIGKA 138
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G +K I+E S V++ ++ LQ +R + ++G+ A ++I S +
Sbjct: 139 GAFIKQIKEDSGSYVQI--SQKPKELTLQ-ERCITIIGEKENNKIACKMILSKI 189
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 225 KLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVH 284
K LVP+ AG++IGK G T+ S+Q+ + V++ A D + +RV + G G+
Sbjct: 30 KTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDF--YPGTSERVCLISGTVDGIL 87
Query: 285 KAMELIGSHLRK 296
++ I +R+
Sbjct: 88 TVLDFIIDKIRE 99
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV + VG+IIGR+G I+ I +++RAR+ + G+ E+A+ I
Sbjct: 141 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNP------- 193
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
D KRI++ + + A + G++ K+L + G +IGK G T+K I +
Sbjct: 194 ---DNCTNACKRILEVMQQE---ANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQE 247
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
++ + V D+ F L +R++ V G + KA I + LR+
Sbjct: 248 TDTKITVSSINDINSFNL--ERIITVKGTIENMAKAESQISAKLRQ 291
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV--MISAKEEPESSLPP 191
+ +P VG+IIG KG I+ I+ + A +KI P ++ + ++A++E + ++
Sbjct: 356 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI---APLEQDKVIEGSVAAQQERKVTIVG 412
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + + I + + + + S +++ ++V +SQ G +IGK G V+ +Q +
Sbjct: 413 SPEAQWKAQYLIFEKMREEGFMSGSD-DVRLTVAIVVASSQVGRIIGKGGQNVRELQRVT 471
Query: 252 NCIVRV 257
++++
Sbjct: 472 GSLIKL 477
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 36/231 (15%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEEPE 186
S ++ +P +VG IIG+ GE IK + ++ A+I++ +D P +T R V +
Sbjct: 135 SSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTP--- 191
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLL-----------VPASQAGS 235
D + + + I D L S A SG G VS +L +P ++ G
Sbjct: 192 -------DQIAKAEQLINDVL----SEAESGGSGIVSRRLTGPSGSEQFVMKIPNNKVGL 240
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+IGK G T+KS+Q + ++V+ LP +R +++ G + + A +L+ +
Sbjct: 241 VIGKGGETIKSMQARTGARIQVI-PLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVIS 299
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ 346
+ S + N Q PP SWGPP G PP P YG+ Q
Sbjct: 300 ENRARNSGMSGGY------NQQGYQARPPSSWGPP-GAPPMQQPNYGYGQQ 343
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPPG--T 172
G ++ G G F M +P KVG +IG+ GE IK + T ARI++ L PPG +
Sbjct: 214 GIVSRRLTGPSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTS 273
Query: 173 TERAVMISAKEE 184
TER + I E
Sbjct: 274 TERTLQIDGSSE 285
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG----EMTVEISGTASQVQTA 461
M+IP + VIG G +I ++ +GA + + PG E T++I G++ Q+++A
Sbjct: 231 MKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESA 290
Query: 462 QQLIQNFMAEAAAPSQAQMGASADQGY 488
+QL+ ++E A + G QGY
Sbjct: 291 KQLVNEVISENRARNSGMSGGYNQQGY 317
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGV---PGEMT--VEISGTASQ 457
+++++IP +IG G +I Y++ SGA IQ TR + P T VE+ GT Q
Sbjct: 136 SKKIEIPNGRVGVIIGKGGETIKYLQLQSGA--KIQVTRDMDADPNSTTRMVELMGTPDQ 193
Query: 458 VQTAQQLIQNFMAEA 472
+ A+QLI + ++EA
Sbjct: 194 IAKAEQLINDVLSEA 208
>gi|342880804|gb|EGU81822.1| hypothetical protein FOXB_07617 [Fusarium oxysporum Fo5176]
Length = 372
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 155/366 (42%), Gaps = 61/366 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + I+
Sbjct: 48 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG--------- 98
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
D + R + + L AP+ G GG V + KLL+ +Q G++IG+QG
Sbjct: 99 -GCDAISRAYAIVARAL---LEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLK 154
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD--- 300
+K IQ+AS VR++ +++ +R+VEV G G+ +A+ + K LVD
Sbjct: 155 IKHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIQRAIW----EICKCLVDDWQ 206
Query: 301 RSIIPLFEMHMQMPNPQMDHIPPPQSWGP-----PQGLPPSGGPGYGHNPQYMPPPRQAE 355
R + + NP + P QG SG YG +P+ M A+
Sbjct: 207 RGTGTV------LYNPVVRTQPSGSGNASGGAGFSQG---SGRSDYGGSPRVMRTGNGAD 257
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
+ + P + A R P + Q TQ + IP
Sbjct: 258 --FSNGNSRPYNRRSDS---DAALRGPPTHDENGEEIQ---------TQNISIPADMVGC 303
Query: 416 VIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAA 473
+IG AG+ IS IR++SGA ++I + GE I GTA ++A L+ +N AE
Sbjct: 304 IIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENLEAEKM 363
Query: 474 APSQAQ 479
SQ Q
Sbjct: 364 RRSQLQ 369
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTE 174
ST++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTE
Sbjct: 45 STKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTE 104
Query: 175 RAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG--KVS-TKLLVPAS 231
R +I E +++ + +R + + S P T +V KL+VP S
Sbjct: 105 RVCLIQGTVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNS 164
Query: 232 QAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
AG +IGK G TVK++ E S V++ D LQ +RVV + G+ KA+E+I
Sbjct: 165 TAGLIIGKGGATVKAVMEQSGAWVQLSQKPD--GINLQ-ERVVTISGEPEQNRKAVEII 220
>gi|344250764|gb|EGW06868.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 147/329 (44%), Gaps = 31/329 (9%)
Query: 139 QKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLR 198
++VGSII +KGE +KK+ EE+ AR I DG ER + ++ P +++ A ++
Sbjct: 4 KEVGSIIAKKGESVKKMREESGARTSISDG--NCPERIITLAG---PTNAIFKAFAMII- 57
Query: 199 VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVL 258
++ +G+ S +++ + + V+ +L+VPASQ GSLIGK G +K I+E++ V+V
Sbjct: 58 --DKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA 115
Query: 259 GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQM 318
G + LP + + + G + + ++ I + + E Q P+P
Sbjct: 116 G-DMLPN---STEWAITIAGIPQSLIECVKQI------------CVVMLETLSQPPHPHP 159
Query: 319 DHIPPPQSWGPPQGLPPSGGP----GYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQG 374
+ P L G G + P Q+ P + PP + HQ
Sbjct: 160 KGLTITYRPKPSSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPLELTKLHQ- 218
Query: 375 ISAYGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAGASISYIRRSSGA 433
++ P+ HG++ + Q T ++ I +IG GA I+ IR+ SGA
Sbjct: 219 LALQQSHFPMT-HGNTGFSAGLDASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGA 277
Query: 434 TVTIQETRGVPGEMTVEISGTASQVQTAQ 462
+ + V I+G+A+ + Q
Sbjct: 278 QIKTANPVEGSTDRQVTITGSAASISLPQ 306
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTTERAVMIS 180
R++VPA + GS+IG+ G IK+I E T A++++ D P +TE A+ I+
Sbjct: 81 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTEWAITIA 130
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 141/342 (41%), Gaps = 70/342 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES--SL 189
RMLVP Q VG+IIG++G IK + ++T++++ I R A E+P + S
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI--------HRKENAGAAEKPITIHST 252
Query: 190 PPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
P R+ I+D + +++ + T + K+L S G LIGK+G +K I+E
Sbjct: 253 PEGCSAACRM---ILDIMQKEANE--TKTTEDIPLKILAHNSLVGRLIGKEGRNLKKIEE 307
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
+ + + +DL ++ +R + V G KA I LR+ +E
Sbjct: 308 DTGTKITISSLQDLTIY--NPERTITVKGSIDACCKAEVEITKKLRE---------AYEN 356
Query: 310 HMQMPNPQMDHIPPPQ-------SWGPPQGLPPSGGPG--------YGHNPQYMPPPRQA 354
+ N Q + IP S G P LPP+ GP G+NP ++
Sbjct: 357 DIAAINQQANLIPGLNLNALGIFSSGLPV-LPPAAGPRSAVPAVAPAGYNP-FLSHSSHL 414
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
Y PP PHQ + ++AP Q + IP
Sbjct: 415 SGLYG----VPPASAIPHQ----HSQQAP----------------EQEVVYLFIPTQAVG 450
Query: 415 AVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEISGT 454
A+IG G I + +GA++ I E+ V M + I+GT
Sbjct: 451 ALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVI-ITGT 491
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEEP 185
P + V + +P Q VG++IG+KG+ IK++ A IKI P TER V+I+ E
Sbjct: 435 PEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEA 494
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
+ + RI L ++ + + K+ T + VP+S AG +IGK G TV
Sbjct: 495 Q----------FKAQGRIFGKLKEENFFS-AKEEVKLETHIKVPSSAAGRVIGKGGKTVN 543
Query: 246 SIQEASNCIVRV 257
+Q ++ V V
Sbjct: 544 ELQNLTSAEVIV 555
>gi|45384194|ref|NP_990402.1| insulin-like growth factor 2 mRNA-binding protein 1 [Gallus gallus]
gi|82227598|sp|O42254.1|IF2B1_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1; AltName: Full=Zip code-binding protein
1; Short=ZBP-1; Short=Zipcode-binding protein 1
gi|2570921|gb|AAB82295.1| zipcode-binding protein [Gallus gallus]
Length = 576
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 158/379 (41%), Gaps = 57/379 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G I+ I ++T+++I + G E+A+ I + E
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPE------ 251
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
G K I++ + ++ + T +V K+L + G LIGK+G +K +++
Sbjct: 252 ----GCSAACKMILEIMQKEAKD--TKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQD 305
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G KA + I +R+ + + H
Sbjct: 306 TETKITISSLQDLTLY--NPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSH 363
Query: 311 MQMPNPQMDHI---PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
+ +P + + P + PP PPS G +MPP ++ + PA +
Sbjct: 364 L-IPGLNLAAVGLFPASSNAVPP---PPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAI 419
Query: 368 EKQPHQGISAYGREAP-----------------VNVHGSSNAQST--------------- 395
+ Q I R A V + G AQ
Sbjct: 420 IGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFF 479
Query: 396 -PSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEIS 452
P ++ +++P S A VIG G +++ ++ + A V + +T ++ V+I
Sbjct: 480 GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKII 539
Query: 453 GTASQVQTAQQLIQNFMAE 471
G Q AQ+ I++ +A+
Sbjct: 540 GHFYASQMAQRKIRDILAQ 558
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE---RAVMISAKE 183
P + + +PAQ VG+IIG+KG+ IK++ A IKI PP T + R V+I+
Sbjct: 402 PEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI--APPETPDSKVRMVVITG-- 457
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PP + + RI L ++ P K+ T + VPAS AG +IGK G T
Sbjct: 458 ------PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLETHIRVPASAAGRVIGKGGKT 508
Query: 244 VKSIQEAS 251
V +Q +
Sbjct: 509 VNELQNLT 516
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 164/403 (40%), Gaps = 80/403 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
RMLVP Q VG+IIG++G IK + ++T++++ I G E+ + I S P
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITI-------HSTP 253
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
R+ I+D + +++ + T + K+L S G LIGK+G +K I+E
Sbjct: 254 EGCSAACRM---ILDIMQKEANE--TKTTEDIPLKILAHNSLVGRLIGKEGRNLKKIEED 308
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G KA I LR+ +E
Sbjct: 309 TGTKITISSLQDLTIY--NPERTITVKGSIDACCKAEVEITKKLRE---------AYEND 357
Query: 311 MQMPNPQMDHIPPPQ-------SWGPPQGLPPSGGPGY---GHNPQ--------YMPPPR 352
+ N Q + IP S G P LPP+ GP PQ Y+ P
Sbjct: 358 IAAINQQANLIPGLNLNALGIFSSGLPV-LPPAAGPRSAVPAVAPQQAPEQEVVYLFIPT 416
Query: 353 Q---------------------AESYYPPADLPPPMEKQ------PHQGISAYGREAPVN 385
Q A PA+ P E+ P A GR
Sbjct: 417 QAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKAQGR----- 471
Query: 386 VHGSSNAQSTPSMITQVTQQ--MQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETR 441
+ G ++ S +V + +++P S A VIG G +++ ++ + A V + +T
Sbjct: 472 IFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP 531
Query: 442 GVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQA-QMGAS 483
E+ V+ISG QTAQ+ I+ + + Q Q GA+
Sbjct: 532 DENDEVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQGAA 574
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEEP 185
P + V + +P Q VG++IG+KG+ IK++ A IKI P TER V+I+ E
Sbjct: 405 PEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEA 464
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
+ + RI L ++ + + K+ T + VP+S AG +IGK G TV
Sbjct: 465 Q----------FKAQGRIFGKLKEENFFS-AKEEVKLETHIKVPSSAAGRVIGKGGKTVN 513
Query: 246 SIQEASNCIVRV 257
+Q ++ V V
Sbjct: 514 ELQNLTSAEVIV 525
>gi|195037250|ref|XP_001990077.1| GH18435 [Drosophila grimshawi]
gi|193894273|gb|EDV93139.1| GH18435 [Drosophila grimshawi]
Length = 569
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 32/183 (17%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
G++ F M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 62 GDTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITG- 120
Query: 183 EEPESSLPPAMDGLLRVHKRIVDGL-----------DSDSSHAPSGTGGKVSTKLLVPAS 231
+++G++ V I+D + D++S A K+LVP S
Sbjct: 121 ---------SVEGIMTVVDFIMDKIREKPDLTTKIIDAESKQAQER---DKQVKILVPNS 168
Query: 232 QAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIG 291
AG +IGK G +K I+E S V++ ++ +LQ +R + ++GD A ++I
Sbjct: 169 TAGMIIGKGGAFIKQIKEESGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMIL 225
Query: 292 SHL 294
S +
Sbjct: 226 SKI 228
>gi|147899778|ref|NP_001083390.1| far upstream element (FUSE) binding protein 3 [Xenopus laevis]
gi|38014650|gb|AAH60400.1| MGC68532 protein [Xenopus laevis]
Length = 546
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 164/414 (39%), Gaps = 66/414 (15%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 85 VPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTGT-------PESIEQ 137
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G ++L+PAS+ G +IGK G T+K +QE + +
Sbjct: 138 AKRLLGQIVDRCRNGPGFHNDMDGSSTVQEILIPASKVGLVIGKGGETIKQLQERTGVKM 197
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-----FLVDRS-------- 302
++ LP A D+ + + GD V +A +L+ +R+ F RS
Sbjct: 198 IMIQDGPLPTGA---DKPLRITGDPFKVQQARDLVLEIIREKDQADFRGIRSDFSSRIGG 254
Query: 303 -----IIPLF----------EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+P F EM ++ N I + P GL P Q
Sbjct: 255 GSVEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRI----QFKPDDGLSPE------RVAQV 304
Query: 348 MPPPRQAE--SYYPPADLPPPMEKQPHQGIS-AYGREAPVNVHGSSNAQSTPSMITQVTQ 404
M P + + ++ + E+ G+S A GR G N STP + ++
Sbjct: 305 MGLPDRCQHAAHIINELILTAQERDGFGGLSLARGRG---RSRGDWNL-STPGSMQEIN- 359
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTA 461
+P VIG G +I I + SGA V +Q P I G Q++ A
Sbjct: 360 -YTVPADKCGLVIGKGGENIKNINQQSGAHVELQRNPPPNTDPAVRIFTIRGVPQQIELA 418
Query: 462 QQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNPGHAGHAGGYGSVY 515
+ LI + + G SA ++ + +P N A G+GS Y
Sbjct: 419 RHLIDEKVGGTTIGGPSSFGQSA------FSQAHATPHQNGPQAFVTQGWGSTY 466
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAKEEPES 187
+V +L+PA KVG +IG+ GE IK++ E T + I I DGP P ++ + I+ +P
Sbjct: 164 TVQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITG--DP-F 220
Query: 188 SLPPAMDGLLRVHKRI----VDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+ A D +L + + G+ SD S G +VS VP G +IG+ G
Sbjct: 221 KVQQARDLVLEIIREKDQADFRGIRSDFSSRIGGGSVEVS----VPRFAVGIIIGRNGEM 276
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+K IQ + VR+ + P L +RV +V+G A +I
Sbjct: 277 IKKIQNDAG--VRI---QFKPDDGLSPERVAQVMGLPDRCQHAAHII 318
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 145/369 (39%), Gaps = 84/369 (22%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTT 173
+G+ + ++P R+LV + VG+IIGR G I++I ++TRAR+ + G+
Sbjct: 140 TIGNRQTEFP-------LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSL 192
Query: 174 ERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQA 233
E+A+ I E + A +L V ++ A + V K+L +
Sbjct: 193 EKAITIYGNPE---NCTNACRKILEVMQQ----------EATNTNKSDVILKILAHNNLI 239
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSH 293
G +IGK+G T+K I + + V + +R++ V G + KA I +
Sbjct: 240 GRIIGKEGNTIKRIMSETET--------KITVSSFNYERIITVKGSIENMSKAEAQISAK 291
Query: 294 LRKFLVDRSIIPLFEMHMQMPNPQMDHIPP--PQSWGPPQGLPPSGGPGYGHNPQYMPPP 351
LR+ FE +Q PQ P P + G+ PG G Y
Sbjct: 292 LRQS---------FENDLQSMAPQTVMFPGLHPMAMMSATGITY---PGRGGPTSYQQFA 339
Query: 352 RQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLS 411
P+ +P P+N +++ Q T + IP S
Sbjct: 340 PAPYPPMYPSTIP------------------PINPALAADVQETAFLF--------IPNS 373
Query: 412 YADAVIGTAGASISYIRRSSGATVTI----QETRGVPGE-----------MTVEISGTAS 456
A+IGT G++I + R SGA+V + E +GV G V I GTA
Sbjct: 374 AVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVTIVGTAD 433
Query: 457 QVQTAQQLI 465
AQ +I
Sbjct: 434 SQWKAQGMI 442
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD---------GPPGTTERAVMI 179
E+ F + +P VG+IIG KG I+ ++ + A +K+ G G A
Sbjct: 364 ETAF-LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQA 422
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
S K ++ D + I D L D P+ +++ ++LVP+SQ G +IG+
Sbjct: 423 SRK----VTIVGTADSQWKAQGMIFDKL-RDEGFVPNNEEVRLTVEILVPSSQVGRIIGR 477
Query: 240 QGGTVKSIQEASNCIVRV--LGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
G V+ +Q + I+++ G+ D +D V ++G A I S +
Sbjct: 478 GGSNVRELQRVTGSIIKLPTQGSTD----GTEDTTTVHIIGHFLATQSAQRRIRSMV 530
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 159/414 (38%), Gaps = 91/414 (21%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPG 171
A + G GE ++L+P+ GSIIG+ G+ I ++ ET A IK+ D PG
Sbjct: 19 ATSTKRSNTAGEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPG 78
Query: 172 TTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKV--------- 222
TTER ++ E LL VH I + + G +
Sbjct: 79 TTERVCLVQGSAES----------LLSVHNFIAEKVREVPQGGTKNDLGVLLPPQTTINA 128
Query: 223 ----STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVG 278
KL+VP + AG +IGK G TV+SI E S V++ P +RVV V G
Sbjct: 129 ERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQL---SQKPAGPNLHERVVTVSG 185
Query: 279 DASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNP----QMDHIPPPQSWGPPQGLP 334
+ S V KA+ RSII H +P +I S GP
Sbjct: 186 EPSQVQKAI-------------RSII-----HKSREDPPQGTTHLNISYTNSQGPVANSN 227
Query: 335 PSGGPGYGHNPQYMPPPRQAESY----YPPADLPPPMEKQPHQGISAYGRE--------- 381
P+G P G + + + P Q DL +++YG
Sbjct: 228 PTGSPYAGGSAEQVLTPFQPAPPAPPAITGGDLLAI--SAALNTLASYGYSTGMGFNPLV 285
Query: 382 -----APVNVHGSSNAQSTP-----------------SMITQVTQQMQIPLSYADAVIGT 419
A VN+ S ++ P S+ + T +M +P + A++G
Sbjct: 286 GGVHPAAVNLLASYTGEAGPALGLGGGGILLEKMGAESVTGKETLEMAVPETLVGAILGK 345
Query: 420 AGASISYIRRSSGATVTI-QETRGVPGEMT--VEISGTASQVQTAQQLIQNFMA 470
G ++ + +GA + I ++ VPG + V I+G Q AQ LI +A
Sbjct: 346 GGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGATQAAQYLIGQRVA 399
>gi|355707685|gb|AES03033.1| neuro-oncological ventral antigen 2 [Mustela putorius furo]
Length = 171
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 3 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 62
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 63 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 119
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK++ E S V++ P +RVV V G+ VHKA+ I
Sbjct: 120 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAI 168
>gi|194903195|ref|XP_001980824.1| GG16798 [Drosophila erecta]
gi|190652527|gb|EDV49782.1| GG16798 [Drosophila erecta]
Length = 572
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 62 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 183 EEP-ESSLPPAMDGLLR---VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E L MD + + +IVD + K+LVP S AG +IG
Sbjct: 122 TEAIMVVLEFIMDKIREKPDLTNKIVDAESKQTQERDK------QVKILVPNSTAGMIIG 175
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ ++ +LQ +R + ++GD A ++I S +
Sbjct: 176 KGGAFIKQIKEESGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSKI 228
>gi|195388678|ref|XP_002053006.1| GJ23641 [Drosophila virilis]
gi|194151092|gb|EDW66526.1| GJ23641 [Drosophila virilis]
Length = 574
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 32/183 (17%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
G++ F M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 62 GDTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITG- 120
Query: 183 EEPESSLPPAMDGLLRVHKRIVDGL-----------DSDSSHAPSGTGGKVSTKLLVPAS 231
+++G++ V I+D + D++S A K+LVP S
Sbjct: 121 ---------SVEGIMTVVDFIMDKIREKPDLTTKIIDAESKQAQER---DKQVKILVPNS 168
Query: 232 QAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIG 291
AG +IGK G +K I+E S V++ ++ +LQ +R + ++GD A ++I
Sbjct: 169 TAGMIIGKGGAFIKQIKEESGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMIL 225
Query: 292 SHL 294
S +
Sbjct: 226 SKI 228
>gi|148676563|gb|EDL08510.1| mCG130458 [Mus musculus]
Length = 569
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 163/402 (40%), Gaps = 72/402 (17%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 136
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G +LL+PAS+ G +IGK G T+K +QE + +
Sbjct: 137 AKRLLGQIVDRCRNGPGFHNDMDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKM 196
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-------------------- 295
++ LP A D+ + + GD V +A E++ +R
Sbjct: 197 VMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRSDFTSRAGG 253
Query: 296 --------KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+F+V I EM ++ N I + P G+ P Q
Sbjct: 254 GSIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 303
Query: 348 MPPPRQAESYYPPAD--LPPPMEKQPHQGIS-AYGREAPVNVHGSSN-AQSTPSMITQVT 403
M PP + + + + E++ G++ GR G S+ + TP + ++T
Sbjct: 304 MGPPDRCQHAARIINELILTAQEREILGGLTVTRGRG-----RGRSDWSVGTPGGVQEIT 358
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQT 460
+P VIG G +I I + SGA V +Q P I G Q++
Sbjct: 359 --YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEV 416
Query: 461 AQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A+ LI + A+ +GA A G +P++ PP+ P
Sbjct: 417 ARHLIDEKVGGAS------LGAPAAFGQSPFS----QPPAAP 448
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAK-EEPE 186
++ +L+PA KVG +IG+ GE IK++ E T + + I DGP P ++ + I+ + +
Sbjct: 163 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ ++ + + G+ SD + G +VS VP G +IG+ G +K
Sbjct: 223 QAREMVLEIIREKDQADFRGVRSDFTSRAGGGSIEVS----VPRFVVGIVIGRNGEMIKK 278
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
IQ + VR+ + P + +R +V+G A +I
Sbjct: 279 IQNDAG--VRI---QFKPDDGISPERAAQVMGPPDRCQHAARII 317
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G IK I ++T++R+ I G E+ V I A E S
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 184
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A +L + ++ D + +V K+L G LIGK+G +K I+
Sbjct: 185 -ACRMILEIMQKEAD---------ETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHE 234
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G A I LR+ FE
Sbjct: 235 TGTKITISSLQDLSIY--NPERTITVRGTIEACANAEIEIMKKLRE---------AFEND 283
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
M N Q + IP GL S + +PPP P +PP
Sbjct: 284 MLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPP------AGPRGVPPSPPYH 328
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
P S Y + H S Q T + IP A+IG GA I + R
Sbjct: 329 PFATHSGYF-SSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARF 387
Query: 431 SGATVTI 437
+GA++ I
Sbjct: 388 AGASIKI 394
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 355 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 411
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 412 -----PP--EAQFKAQGRIFGKLKEENFFNPK-EEVKLEAHIRVPSSTAGRVIGKGGKTV 463
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 464 NELQNLTSAEVIV 476
>gi|161078120|ref|NP_001036697.1| pasilla, isoform J [Drosophila melanogaster]
gi|19527741|gb|AAL89985.1| AT03366p [Drosophila melanogaster]
gi|113194765|gb|ABI31154.1| pasilla, isoform J [Drosophila melanogaster]
Length = 539
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 29 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 88
Query: 183 EEPESSLPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E + + +R + +IVD DS + K+LVP S AG +IG
Sbjct: 89 TEAIMVVMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIG 142
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 143 KGGAFIKQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 195
>gi|432116592|gb|ELK37385.1| Far upstream element-binding protein 3 [Myotis davidii]
Length = 651
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 153/399 (38%), Gaps = 66/399 (16%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 136
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G ++L+PAS+ G +IGK G T+K +QE + +
Sbjct: 137 AKRLLGQIVDRCRNGPGFHNDIDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKM 196
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-------------------- 295
++ LP A D+ + + GD V +A E++ +R
Sbjct: 197 VMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFASRMGG 253
Query: 296 --------KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+F V I EM ++ N I + P G+ P Q
Sbjct: 254 GSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 303
Query: 348 M-PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
M PP R + + +L + Q G + TP I ++T
Sbjct: 304 MGPPDRCQHAAHVINEL--ILTAQERDGFGGLAVARGRGRGRGDWSMGTPGGIQEIT--Y 359
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQ 463
+P VIG G +I I + SGA V +Q P I G Q++ A+
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARH 419
Query: 464 LIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
LI + + +GA G +P++ PP+ P
Sbjct: 420 LIDEKVGGTS------LGAPGTYGQSPFS----QPPAAP 448
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAKEEPES 187
++ +L+PA KVG +IG+ GE IK++ E T + + I DGP P ++ + I+
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ ++R K D A GG S ++ VP G +IG+ G +K I
Sbjct: 223 QAREMVLEIIR-EKDQADFRGVRGDFASRMGGG--SIEVSVPRFAVGIVIGRNGEMIKKI 279
Query: 248 QE 249
Q
Sbjct: 280 QN 281
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 77/192 (40%), Gaps = 40/192 (20%)
Query: 94 PEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRM-------LVPAQKVGSIIG 146
P I + ++Q+ +E + + + + G G+ RM VP VG +IG
Sbjct: 211 PLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFASRMGGGSIEVSVPRFAVGIVIG 270
Query: 147 RKGEFIKKIVEETRARIKI-------------LDGPPGTTERA------VMISAKEEPES 187
R GE IKKI + RI+ + GPP + A ++++A+E
Sbjct: 271 RNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQER--- 327
Query: 188 SLPPAMDGL--LRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
DG L V + G S P GG VPA + G +IGK G +K
Sbjct: 328 ------DGFGGLAVARGRGRGRGDWSMGTP---GGIQEITYTVPADKCGLVIGKGGENIK 378
Query: 246 SIQEASNCIVRV 257
SI + S V +
Sbjct: 379 SINQQSGAHVEL 390
>gi|24645370|ref|NP_731356.1| pasilla, isoform C [Drosophila melanogaster]
gi|11526808|gb|AAG36790.1|AF220423_1 PASILLA splice variant 4 [Drosophila melanogaster]
gi|23170800|gb|AAF54378.2| pasilla, isoform C [Drosophila melanogaster]
Length = 561
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
++LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+ E
Sbjct: 57 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 116
Query: 189 LPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ + +R + +IVD DS + K+LVP S AG +IGK G +
Sbjct: 117 VMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIGKGGAFI 170
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 171 KQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 217
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 151/343 (44%), Gaps = 61/343 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
R LV G IIG+ G I + ++ ARI++ + PGT +R +M+S +
Sbjct: 43 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFD---E 99
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ AM+ L + K + +G +S+ + A + +L+VP S G +IGK G T+KS
Sbjct: 100 VIKAME--LILEKLLAEGEESNEAEA------RPKVRLVVPNSSCGGIIGKGGSTIKSFI 151
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
E S+ +++ +D L DR+V V G +A+ LI S L + +
Sbjct: 152 EDSHAGIKI-SPQDNNFVGLH-DRLVTVTGPLDHQMRAIYLILSKLSEDV---------- 199
Query: 309 MHMQMPNPQMDHIPPPQSW-GPPQGLPPSGGPGYGHNP-QYMPPPRQAESYYPPADLPPP 366
H PP S P GL G P Y P YM P P
Sbjct: 200 -----------HYPPNLSSPFPYAGL---GFPSYPGVPVGYMIP-------------QVP 232
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
+ G + YG N S+ +S + Q + + I + AV+G AG +I+
Sbjct: 233 YNNAVNYGPNGYGGRYQ-NNKPSTPMRSPANNDAQDSLTIGIADEHIGAVVGRAGRNITE 291
Query: 427 IRRSSGATVTIQETRG--VPG--EMTVEISGTASQVQTAQQLI 465
I ++SGA + I + RG + G E V I+GT+ +Q A+ +I
Sbjct: 292 IIQASGARIKISD-RGDFIAGTSERKVTITGTSEAIQAAESMI 333
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 132/335 (39%), Gaps = 70/335 (20%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTER 175
GS++ + +P R+LVP Q VG+IIG++G IK I ++T++R+ I G E+
Sbjct: 128 GSSQARQIDFP----LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEK 183
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
V I A E S A +L + ++ D + ++ K+L G
Sbjct: 184 PVTIHATPEGTSE---ACRMILEIMQKEAD---------ETKLAEEIPLKILAHNGLVGR 231
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGK+G +K I+ + + + +DL ++ +R + V G A I LR
Sbjct: 232 LIGKEGRNLKKIEHETGTKITISSLQDLSIY--NPERTITVKGTVEACANAEVEIMKKLR 289
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPP---- 351
+ FE M N Q + IP GL S + +PPP
Sbjct: 290 E---------AFENDMLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPPTGPR 331
Query: 352 --RQAESYYPPA-------DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQV 402
A Y+P A L PP + P +Y + VN+
Sbjct: 332 GAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLF--------------- 376
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI 437
IP A+IG GA I + R +GA++ I
Sbjct: 377 -----IPTQAVGAIIGKKGAHIKQLARFAGASIKI 406
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 367 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 423
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 424 -----PP--EAQFKAQGRIFGKLKEENFFNPKEEV-KLEAHIRVPSSTAGRVIGKGGKTV 475
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 476 NELQNLTSAEVIV 488
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE + + EE+ A+I I DG ER V +S +
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CPERIVTVSG------TTNA 77
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSIQE 249
+ K+ + S +G GK + +L+VPASQ GSLIGK G +K I++
Sbjct: 78 IFSAFTLITKKFEEWC---SQFNDAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
+ C ++V +E LP +R V + G A + + +
Sbjct: 135 TTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCI 168
>gi|291234615|ref|XP_002737239.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1-like
[Saccoglossus kowalevskii]
Length = 655
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 130/312 (41%), Gaps = 62/312 (19%)
Query: 133 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTT--ERAVMISAK-EEPESSL 189
R+LVP+ VG+IIG+KG I+ I ++T+A++ IL + E+A+ I + +++
Sbjct: 231 RLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKENASALEKAINIYGTPLQCSNTV 290
Query: 190 PPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
M+ +++ + S PS ++ KLL S G LIGK G T+ I E
Sbjct: 291 EQIMETMVK----------ENESANPS---IEIPLKLLAHNSLVGRLIGKGGTTLNKIME 337
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
SN V + ++L ++ ++ R + + G + KA E++ LR F
Sbjct: 338 ESNTKVSISNLQELTIYNME--RTITIKGSLNDECKAEEMVSEKLRDS---------FRA 386
Query: 310 HMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYG---HNPQYMPPPRQAESYYPPADLPPP 366
M Q + P GL S G + HN + + + PA
Sbjct: 387 DMASLTQQYNLFPGLNHASVFSGLGNSPGAIFNVAMHNSAVL------YAIFGPA----- 435
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
AY VN H + PS IT + IP+S A+IG G I
Sbjct: 436 ----------AY----TVNTH---HLLQPPSEIT----YLFIPISAVGAIIGVKGQEIRE 474
Query: 427 IRRSSGATVTIQ 438
I + S A V ++
Sbjct: 475 ISQKSSAKVRVE 486
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT---TERAVMISAKEEPESSLP 190
+ +P VG+IIG KG+ I++I +++ A++++ PP + ERAV I + +
Sbjct: 454 LFIPISAVGAIIGVKGQEIREISQKSSAKVRV--EPPRSEDDEERAVYIEGYPDAQ---- 507
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ HK + D SG G ++ ++++VPA+ G +IGK+G ++ ++
Sbjct: 508 -WIAQWFIYHKILTD--------VCSGKGEVRLISEIMVPANMVGRIIGKRGSAIQDLE 557
>gi|170087462|ref|XP_001874954.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650154|gb|EDR14395.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 339
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 59 MRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGP--------- 109
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGKQG +K IQ+A
Sbjct: 110 -LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDA 168
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S R+ +E + +RV+ V G A +H A IG+ L
Sbjct: 169 SGA--RLNASEGM--LPGSTERVLSVAGVADAIHIATYYIGNIL 208
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQ 459
VT + IP S +VIG G+ I I+ +SGA + E +PG E + ++G A +
Sbjct: 140 VTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGM-LPGSTERVLSVAGVADAIH 198
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYNP--YAS 493
A I N + EA Q +M +SA+ Y P YAS
Sbjct: 199 IATYYIGNILIEA----QERMPSSANSTYRPSRYAS 230
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTT 173
G T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTT
Sbjct: 52 GCTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 111
Query: 174 ERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS--DSSHAPSGTG----------GK 221
ER +I E A++G VH I + + S+ P +
Sbjct: 112 ERVCLIQGTVE-------ALNG---VHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDR 161
Query: 222 VS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDA 280
V KL+VP S AG +IGK G TVK++ E S V++ P +RVV + G+
Sbjct: 162 VKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEP 218
Query: 281 SGVHKAMELI 290
KA+E+I
Sbjct: 219 EQNRKAVEII 228
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 132/335 (39%), Gaps = 70/335 (20%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTER 175
GS++ + +P R+LVP Q VG+IIG++G IK I ++T++R+ I G E+
Sbjct: 122 GSSQARQIDFP----LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEK 177
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
V I A E S A +L + ++ D + ++ K+L G
Sbjct: 178 PVTIHATPEGTSE---ACRMILEIMQKEAD---------ETKLAEEIPLKILAHNGLVGR 225
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGK+G +K I+ + + + +DL ++ +R + V G A I LR
Sbjct: 226 LIGKEGRNLKKIEHETGTKITISSLQDLSIY--NPERTITVKGTVEACANAEVEIMKKLR 283
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPP---- 351
+ FE M N Q + IP GL S + +PPP
Sbjct: 284 E---------AFENDMLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPPTGPR 325
Query: 352 --RQAESYYPPA-------DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQV 402
A Y+P A L PP + P +Y + VN+
Sbjct: 326 GAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLF--------------- 370
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI 437
IP A+IG GA I + R +GA++ I
Sbjct: 371 -----IPTQAVGAIIGKKGAHIKQLARFAGASIKI 400
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 361 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 417
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 418 -----PP--EAQFKAQGRIFGKLKEENFFNPKEEV-KLEAHIRVPSSTAGRVIGKGGKTV 469
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 470 NELQNLTSAEVIV 482
>gi|224922832|ref|NP_001028561.2| far upstream element (FUSE) binding protein 3 [Mus musculus]
gi|74198475|dbj|BAE39720.1| unnamed protein product [Mus musculus]
Length = 575
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 163/402 (40%), Gaps = 72/402 (17%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 136
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G +LL+PAS+ G +IGK G T+K +QE + +
Sbjct: 137 AKRLLGQIVDRCRNGPGFHNDMDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKM 196
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-------------------- 295
++ LP A D+ + + GD V +A E++ +R
Sbjct: 197 VMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRSDFTSRAGG 253
Query: 296 --------KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+F+V I EM ++ N I + P G+ P Q
Sbjct: 254 GSIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 303
Query: 348 MPPPRQAESYYPPAD--LPPPMEKQPHQGIS-AYGREAPVNVHGSSN-AQSTPSMITQVT 403
M PP + + + + E++ G++ GR G S+ + TP + ++T
Sbjct: 304 MGPPDRCQHAARIINELILTAQEREILGGLTVTRGRG-----RGRSDWSVGTPGGVQEIT 358
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQT 460
+P VIG G +I I + SGA V +Q P I G Q++
Sbjct: 359 --YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEV 416
Query: 461 AQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A+ LI + A+ +GA A G +P++ PP+ P
Sbjct: 417 ARHLIDEKVGGAS------LGAPAAFGQSPFS----QPPAAP 448
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAK-EEPE 186
++ +L+PA KVG +IG+ GE IK++ E T + + I DGP P ++ + I+ + +
Sbjct: 163 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ ++ + + G+ SD + G +VS VP G +IG+ G +K
Sbjct: 223 QAREMVLEIIREKDQADFRGVRSDFTSRAGGGSIEVS----VPRFVVGIVIGRNGEMIKK 278
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
IQ + VR+ + P + +R +V+G A +I
Sbjct: 279 IQNDAG--VRI---QFKPDDGISPERAAQVMGPPDRCQHAARII 317
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 91/189 (48%), Gaps = 29/189 (15%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTE 174
ST++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTE
Sbjct: 45 STKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTE 104
Query: 175 RAVMISAKEEPESSLPPAMDGLLRVHKRIVDGL----DSDSSHAPSGTGGKVST------ 224
R +I E A++G VH I + + S P +T
Sbjct: 105 RVCLIQGTVE-------ALNG---VHNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRI 154
Query: 225 ---KLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
KL+VP S AG +IGK G TVK++ E S V++ P +RVV V G+
Sbjct: 155 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPE 211
Query: 282 GVHKAMELI 290
KA+E+I
Sbjct: 212 QNRKAVEII 220
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 72/349 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
R LV G IIG+ G I ++ ARI++ + PGT +R +M+S +
Sbjct: 42 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFD---E 98
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ AM+ +L K + +G + + + A + +L+VP S G +IGK G T+KS
Sbjct: 99 VMKAMELIL--EKLLAEGEEFNEAEA------RPKVRLVVPNSSCGGIIGKGGATIKSFI 150
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
E S+ +++ +D L DR+V V G A++LI L+K D P
Sbjct: 151 EESHAGIKI-SPQDNNYVGLH-DRLVTVTGTFDNQMNAIDLI---LKKLSEDVHYPP--- 202
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
++ P P + P G P G YM P
Sbjct: 203 -NLSSPFPYAG-LTFPNYPGVPVG--------------YMIP------------------ 228
Query: 369 KQPHQGISAYGREAPVNVHGSSNAQSTPS--MITQVTQQMQ--IPLSYAD----AVIGTA 420
+ P+ YG P N +G + PS M + + + Q + + AD AV+G A
Sbjct: 229 QVPYNNAVNYG---PNNGYGGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRA 285
Query: 421 GASISYIRRSSGATVTIQETRG--VPG--EMTVEISGTASQVQTAQQLI 465
G +I+ I ++SGA + I + RG + G + V I+GT+ ++TA+ +I
Sbjct: 286 GRNITEIIQASGARIKISD-RGDFISGTSDRKVTITGTSEAIRTAESMI 333
>gi|389630232|ref|XP_003712769.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|351645101|gb|EHA52962.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|440469705|gb|ELQ38806.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482607|gb|ELQ63080.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 370
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 151/356 (42%), Gaps = 46/356 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + I+ E S
Sbjct: 47 TVRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEGISKAY 106
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
V + +++G APS G GG VS KLL+ +Q G++IG+QG
Sbjct: 107 AV------VARALLEG-------APSMGMGGVVSNNGTHPIKLLISHNQMGTIIGRQGLK 153
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+ S VR++ +++ +RVVEV G G+ +A+ + K L+D
Sbjct: 154 IKHIQDVSG--VRMVAQKEM--LPQSTERVVEVQGTPEGIQRAVW----EICKCLID--- 202
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
+ + + Q G Q S G GYG + + + AD
Sbjct: 203 ----DWQRGTGTVLYNPVVRTQPAGATQ--MGSSGAGYGTSNRGDYSSSRVTRTGNGADF 256
Query: 364 PPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGAS 423
+ G +Y R + + + TQ + IP +IG AG+
Sbjct: 257 -------SNGGGRSYNRRSDSDAANRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSK 309
Query: 424 ISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
IS IR++SGA ++I + GE I G+A +TA L+ +N AE SQ
Sbjct: 310 ISEIRKTSGARISIAKAPHDETGERMFTIMGSAKANETALFLLYENLEAEKMRRSQ 365
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 7/187 (3%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
VF+++ + G IIG++G I+ + ET A I I + ER V ISA+E ES
Sbjct: 278 VFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTISARENLESRYS 337
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
A + L V R V+ +D + P G V TKLLVP+ A SL+G G ++I
Sbjct: 338 HAQNALALVFARSVE-IDVEKGLRPGLHNGAVVKTKLLVPSQFANSLVGN--GNREAII- 393
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
A+ V + + + +++ V+E+ G+ V KA+ + S LR+ L+ + + L EM
Sbjct: 394 ATGADVHIPVDNQILEWISENEVVIEIKGEYGHVQKALTHVSSKLRENLLPKKV--LGEM 451
Query: 310 HMQMPNP 316
++ NP
Sbjct: 452 RARVSNP 458
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 26/191 (13%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P E+ R++ A +G IIG G + K+ ET +I G+ V I
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 187 SS----------------------LPPAMDGLLRVHKRIVDGLDS-DSSHAPSGTGGKVS 223
S + A L+RV +R L + D G +
Sbjct: 82 KSVLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAY 141
Query: 224 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGV 283
+L +Q G+++G G V+ ++ +S ++RVL P+ D ++++ GD V
Sbjct: 142 CGILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLPP---PICGTNTDELIQITGDVLAV 198
Query: 284 HKAMELIGSHL 294
KA+ ++ + +
Sbjct: 199 KKALVMVSTCI 209
>gi|331232797|ref|XP_003329060.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308050|gb|EFP84641.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G I ++ E++ AR I + PG ER + ++
Sbjct: 108 MRALIVTQDASIIIGKGGRHINEVREKSGARATISEAVPGNAERILSVAGP--------- 158
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ + +VP S+ GS+IGK G +K IQ+
Sbjct: 159 -LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIRFIVPNSRMGSVIGKAGSKIKEIQDM 217
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
S RV +E L +RV+ + G A VH A+ +G LVD
Sbjct: 218 SGA--RVQASEAL--LPGSTERVLSISGVADAVHIAVYYVG----MILVD 259
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G IK I ++T++R+ I G E+ V I A E S
Sbjct: 200 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 257
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A +L + ++ D + +V K+L G LIGK+G +K I+
Sbjct: 258 -ACRMILEIMQKEAD---------ETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHE 307
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G A I LR+ FE
Sbjct: 308 TGTKITISSLQDLSIY--NPERTITVRGTIEACANAEIEIMKKLRE---------AFEND 356
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
M N Q + IP GL S + +PPP P +PP
Sbjct: 357 MLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPP------AGPRGVPPSPPYH 401
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
P S Y + H S Q T + IP A+IG GA I + R
Sbjct: 402 PFATHSGYF-SSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARF 460
Query: 431 SGATVTI 437
+GA++ I
Sbjct: 461 AGASIKI 467
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 428 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 484
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 485 -----PP--EAQFKAQGRIFGKLKEENFFNPK-EEVKLEAHIRVPSSTAGRVIGKGGKTV 536
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 537 NELQNLTSAEVIV 549
>gi|212275119|ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
gi|413936737|gb|AFW71288.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 112/246 (45%), Gaps = 34/246 (13%)
Query: 133 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESSL 189
++ +P +VG IIG+ GE I+ I ++ A+I++ + PG R V +S E
Sbjct: 145 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGNPE----- 199
Query: 190 PPAMDGLLRVHKRIVDGLDSDSSHAPSGTG-------GKVSTKLLVPASQAGSLIGKQGG 242
+ ++ K ++ D+ SS A SG G + ++ + ++ G +IGK G
Sbjct: 200 --QISKAEQLIKEVIAEADAGSSGAVSGGRKYNAPQPGAETFQMKIANNKVGLIIGKGGE 257
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRS 302
T+KS+Q S ++V+ LP +R V + G + A +L+ + +R+
Sbjct: 258 TIKSMQAKSGARIQVI-PLHLPAGDTSTERTVHIDGTQEQIEHAKQLVAEVTSE---NRA 313
Query: 303 IIPLFEMHMQMPNPQMDHIPPPQS-WGPPQGLPPSGGPGY-------GHNPQYMPPPRQA 354
P+ + Q Q H P PQS WGPP P G GY G PQY P+Q
Sbjct: 314 RNPMSGGYSQ----QGYHPPRPQSNWGPPSAPPQQSGYGYMQPGAYPGAPPQYG-APQQP 368
Query: 355 ESYYPP 360
YPP
Sbjct: 369 YGSYPP 374
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI-QETRGVPGEMT--VEISGTASQV 458
+++++IP +IG AG +I YI+ SGA + + ++ PG +T VE+SG Q+
Sbjct: 142 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGNPEQI 201
Query: 459 QTAQQLIQNFMAEAAAPS 476
A+QLI+ +AEA A S
Sbjct: 202 SKAEQLIKEVIAEADAGS 219
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 72 QVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQE---KQENEVNLAVGSTEKKWPGWPG 128
QV DH E V PE I + ++E + + + AV K PG
Sbjct: 176 QVTRDHEAEPGALTRQVELSGNPEQISKAEQLIKEVIAEADAGSSGAVSGGRKYNAPQPG 235
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPPG--TTERAVMISAKEE 184
F+M + KVG IIG+ GE IK + ++ ARI++ L P G +TER V I +E
Sbjct: 236 AETFQMKIANNKVGLIIGKGGETIKSMQAKSGARIQVIPLHLPAGDTSTERTVHIDGTQE 295
>gi|261197389|ref|XP_002625097.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595727|gb|EEQ78308.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239606718|gb|EEQ83705.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327358051|gb|EGE86908.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 363
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 146/359 (40%), Gaps = 56/359 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + ++
Sbjct: 45 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGP-------- 96
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
+ G + + + GL AP G GG VS +LL+ +Q G++IG+QG
Sbjct: 97 --LQGTAKAYAIVAKGL---LEGAPQLGMGGVVSNTGTHPVRLLISHNQMGTIIGRQGLK 151
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD--- 300
+K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 152 IKYIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLIDDWQ 203
Query: 301 RSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPP 360
R + ++ + P S G GG Y Q Y
Sbjct: 204 RGTGTV--LYNPAVRASVGGGPMNNSLGSGTAAGGYGGRSYNRTGNGADFSDQTGGYNRR 261
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTA 420
++ A R P+ Q TQ + IP +IG
Sbjct: 262 SNS------------DAANRGIPLVTEDGEEVQ---------TQNISIPSDMVGCIIGRG 300
Query: 421 GASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
G+ IS IRRSSGA ++I + GE I G+A+ + A L+ +N AE SQ
Sbjct: 301 GSKISEIRRSSGARISIAKAPHDETGERMFTIMGSAAANEKALYLLYENLEAEKMRRSQ 359
>gi|194741910|ref|XP_001953430.1| GF17214 [Drosophila ananassae]
gi|190626489|gb|EDV42013.1| GF17214 [Drosophila ananassae]
Length = 532
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 62 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 183 EEP-ESSLPPAMDGLLR---VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E L MD + + +I+D + K+LVP S AG +IG
Sbjct: 122 TEAIMFVLDFIMDKIREKPDLTTKIIDAESKQTQERDK------QVKILVPNSTAGMIIG 175
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ ++ +LQ +R + ++GD A ++I S +
Sbjct: 176 KGGAFIKQIKEESGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSKI 228
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G IK I ++T++R+ I G E+ V I A E S
Sbjct: 193 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 250
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A +L + ++ D + +V K+L G LIGK+G +K I+
Sbjct: 251 -ACRMILEIMQKEAD---------ETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHE 300
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G A I LR+ FE
Sbjct: 301 TGTKITISSLQDLSIY--NPERTITVRGTIEACANAEIEIMKKLRE---------AFEND 349
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
M N Q + IP GL S + +PPP P +PP
Sbjct: 350 MLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPP------AGPRGVPPSPPYH 394
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
P S Y + H S Q T + IP A+IG GA I + R
Sbjct: 395 PFATHSGYF-SSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARF 453
Query: 431 SGATVTI 437
+GA++ I
Sbjct: 454 AGASIKI 460
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 421 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 477
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 478 -----PP--EAQFKAQGRIFGKLKEENFFNPK-EEVKLEAHIRVPSSTAGRVIGKGGKTV 529
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 530 NELQNLTSAEVIV 542
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 130/334 (38%), Gaps = 58/334 (17%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTER 175
GS++ + +P R+LVP Q VG+IIG++G IK I ++T++R+ I G E+
Sbjct: 183 GSSQARQIDFP----LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEK 238
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
V I A E S A +L + ++ D + ++ K+L G
Sbjct: 239 PVTIHATPEGTSE---ACRMILEIMQKEAD---------ETKLAEEIPLKILAHNGLVGR 286
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGK+G +K I+ + + + +DL ++ +R + V G A I LR
Sbjct: 287 LIGKEGRNLKKIEHETGTKITISSLQDLSIY--NPERTITVKGTVEACANAEIEIMKKLR 344
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
+ FE M N Q + IP GL S + +PPP
Sbjct: 345 E---------AFENDMLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPPSG-- 384
Query: 356 SYYPPADLPPPMEKQPHQGISAYGRE-------APVNVHGSSNAQSTPSMITQVTQQMQI 408
P PP P S Y +P H S Q ++ I
Sbjct: 385 ----PRGAPPAAPYHPFATHSGYFSSLYPHHQFSPFPHHHSYPEQEIVNLF--------I 432
Query: 409 PLSYADAVIGTAGASISYIRRSSGATVTIQETRG 442
P A+IG GA I + R +GA++ I G
Sbjct: 433 PTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG 466
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 422 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 478
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 479 -----PP--EAQFKAQGRIFGKLKEENFFNPKEEV-KLEAHIRVPSSTAGRVIGKGGKTV 530
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 531 NELQNLTSAEVIV 543
>gi|327307466|ref|XP_003238424.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326458680|gb|EGD84133.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 367
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 145/364 (39%), Gaps = 62/364 (17%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFI-------------KKIVEETRARIKILDGPPGTTERAV 177
R +V +++ G IIG+ G+ + K+V+ R+ + GP T +A
Sbjct: 49 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAY 108
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
I AK E + M G+++ ++ +H S +LL+ +Q G++I
Sbjct: 109 SIVAKSLLEGAPQMGMGGVVQ----------NNGTH---------SVRLLISHNQMGTII 149
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
G+QG +K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG L
Sbjct: 150 GRQGLKIKYIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAIWEIGKCLIDD 205
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY 357
+ L+ ++ P G G+ + P SY
Sbjct: 206 WQRGTGTVLYNPAVRASVGSSSGQGSVTGTNPSYGGSSRSYNRTGNGADFSDHP---SSY 262
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVI 417
+ P++GI P+ Q+ Q + IP +I
Sbjct: 263 SRRGN-----NDNPNRGI-------PLVTEDGEEVQT---------QNISIPSDMVGCII 301
Query: 418 GTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAP 475
G G IS IRRSSGA ++I + GE I G+A + A L+ +N AE
Sbjct: 302 GRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENLEAEKMRR 361
Query: 476 SQAQ 479
SQ Q
Sbjct: 362 SQQQ 365
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G IK I ++T++R+ I G E+ V I A E S
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 246
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A +L + ++ D + +V K+L G LIGK+G +K I+
Sbjct: 247 -ACRMILEIMQKEAD---------ETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHE 296
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G A I LR+ FE
Sbjct: 297 TGTKITISSLQDLSIY--NPERTITVRGTIEACANAEIEIMKKLRE---------AFEND 345
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
M N Q + IP GL S + +PPP P +PP
Sbjct: 346 MLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPP------AGPRGVPPSPPYH 390
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
P S Y + H S Q T + IP A+IG GA I + R
Sbjct: 391 PFATHSGYF-SSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARF 449
Query: 431 SGATVTI 437
+GA++ I
Sbjct: 450 AGASIKI 456
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 417 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 473
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 474 -----PP--EAQFKAQGRIFGKLKEENFFNPK-EEVKLEAHIRVPSSTAGRVIGKGGKTV 525
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 526 NELQNLTSAEVIV 538
>gi|195499424|ref|XP_002096942.1| GE25952 [Drosophila yakuba]
gi|194183043|gb|EDW96654.1| GE25952 [Drosophila yakuba]
Length = 572
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 62 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 183 EEP-ESSLPPAMDGLLR---VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E L MD + + +IVD ++S + K+LVP S AG +IG
Sbjct: 122 TEAIMVVLEFIMDKIREKPDLTNKIVD-VESKQTQERDK-----QVKILVPNSTAGMIIG 175
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ ++ +LQ +R + ++GD A ++I S +
Sbjct: 176 KGGAFIKQIKEESGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSKI 228
>gi|328784994|ref|XP_003250531.1| PREDICTED: RNA-binding protein Nova-2-like [Apis mellifera]
Length = 514
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 117 GSTEKKWPGWPGESVF--RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
G+T++ G G+ + ++LVP G+IIG+ G+ I ++ ++T AR+K+ D PG
Sbjct: 30 GATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPG 89
Query: 172 TTERAVMISAKEEPESSLPPAMDGLL-RVHKR----IVDGLDSDSSHAPSGTGGKVSTKL 226
TTER +I+ E ++ MD ++ ++ ++ + +D +S + +V K+
Sbjct: 90 TTERVCLITGSLE---AIMAVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQV--KI 144
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LVP S AG +IGK G +K I+E V++ ++ +LQ +R + V+G+ A
Sbjct: 145 LVPNSTAGMIIGKAGNYIKQIKEECGSYVQI--SQKAKDVSLQ-ERCITVIGEKENNRNA 201
Query: 287 MELI 290
+ +I
Sbjct: 202 LMMI 205
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 207 LDSDS-------SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLG 259
LD D+ SH SG G K+LVP AG++IGK G T+ +Q+ + V++
Sbjct: 23 LDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSK 82
Query: 260 AEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ D + +RV + G + M+ I +R+
Sbjct: 83 SHDF--YPGTTERVCLITGSLEAIMAVMDFIMDKIRE 117
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 29/189 (15%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTE 174
ST++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTE
Sbjct: 45 STKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTE 104
Query: 175 RAVMISAKEEPESSLPPAMDGLLRVHKRIVDGL----DSDSSHAPSGTGGKVST------ 224
R +I E A++G VH I + + S P +T
Sbjct: 105 RVCLIQGTVE-------ALNG---VHNFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRV 154
Query: 225 ---KLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
KL+VP S AG +IGK G TVK++ E S V++ P +RVV + G+
Sbjct: 155 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPE 211
Query: 282 GVHKAMELI 290
KA+E+I
Sbjct: 212 QNRKAVEII 220
>gi|156056018|ref|XP_001593933.1| hypothetical protein SS1G_05361 [Sclerotinia sclerotiorum 1980]
gi|154703145|gb|EDO02884.1| hypothetical protein SS1G_05361 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 554
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE---------RAVMI 179
E+V + + + VG IIGR+GE ++++ ET R++ + GP T RA
Sbjct: 188 ENVESISIESNLVGLIIGRQGENLRRVESETGCRVQFITGPDETGPFRTCKITGPRARRA 247
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
AK E + + G L D DSSH P+ G+ S +++VP G +IG+
Sbjct: 248 DAKAEITRIIDDSGLGPLSDRAPRQDNNTRDSSHQPALRDGEDSMQIMVPDRTVGLIIGR 307
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
G T++ +QE S C V ++G E V L R V ++G A +LI
Sbjct: 308 GGETIRDLQERSGCHVNIVG-EQKSVNGL---RPVNLIGTREAAAMAKDLI 354
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 35/155 (22%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE-RAVMISAKEEPE 186
GE +++VP + VG IIGR GE I+ + E + + I+ R V + E
Sbjct: 288 GEDSMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSVNGLRPVNLIGTREAA 347
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPS------------------------GTGGKV 222
+ A D ++ + ++SDS AP G G K+
Sbjct: 348 AM---AKDLIMEI-------VESDSKSAPKERAPAPRENNRDAGYGGAYGSGGGGQGDKI 397
Query: 223 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRV 257
+ + VP+ G +IGK G T+K +Q + C + V
Sbjct: 398 NDSIFVPSEAVGMIIGKGGETIKDMQNTTGCKINV 432
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTE 174
ST++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTE
Sbjct: 45 STKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTE 104
Query: 175 RAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG--KVS-TKLLVPAS 231
R +I E + + + +R + + S P T +V KL+VP S
Sbjct: 105 RVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNS 164
Query: 232 QAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
AG +IGK G TVK++ E S V++ P +RVV + G+ KA+E+I
Sbjct: 165 TAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQNRKAVEII 220
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 23/181 (12%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
PG+ FR++ A K+G++IG G I +I ET + + G+ RA++++ PE
Sbjct: 23 PGQVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASPE 82
Query: 187 SSLP----------PAMDGLLRVHKRI--VDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
+ A + ++RV +R+ VD + D G LL SQ G
Sbjct: 83 RKIAVGEDETVEVSAAQEAVVRVLERMWEVDAV-KDGGDCEGYCG------LLANTSQIG 135
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS-GVHKAMELIGSH 293
+++G++G +K ++ AS + +L A P+ AL++D+++++ G ++ V KA+ I S
Sbjct: 136 AVVGREGRNIKRMKRASGAHIWILPA---PLCALKEDQLIQITGSSTVAVKKAVIAITSC 192
Query: 294 L 294
L
Sbjct: 193 L 193
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 113 NLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 172
N+A KK P + FRM+ P GSIIG+ G ++ + +T A I+ PP T
Sbjct: 240 NIATDKDHKK-PNEQLQVQFRMICPHGAAGSIIGKGGSVVRALQNQTGA--SIILAPPIT 296
Query: 173 TE--RAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG----KVSTKL 226
R V +SA E ESS PA + LL V R ++ D A S G V+ L
Sbjct: 297 NSDGRLVTVSALENLESSHSPAQNALLLVFAR---SIEHDIERARS-LGLIEEITVTATL 352
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEV 276
L+P+++ LI + G + E + +++L + A +D V++V
Sbjct: 353 LLPSNRVSCLIERGGRIDSEMIETTGADIQILQGDQFFYCASNNDVVLQV 402
>gi|57525224|ref|NP_001006199.1| far upstream element-binding protein 3 [Gallus gallus]
gi|53127676|emb|CAG31167.1| hypothetical protein RCJMB04_2o21 [Gallus gallus]
Length = 539
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 159/412 (38%), Gaps = 62/412 (15%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 102 VPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLTGT-------PESIEQ 154
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G ++L+PAS+ G +IGK G T+K +QE + V
Sbjct: 155 AKRLLGQIVDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTG--V 212
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-------------------- 295
+++ +D P+ D+ + + GDA V +A E++ +R
Sbjct: 213 KMIMIQDGPM-PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRNDFSSRMGG 271
Query: 296 --------KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+F V I EM ++ N I + P G+ P Q
Sbjct: 272 GSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RVAQV 321
Query: 348 MP-PPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
M P R + + ++L + Q G + + TP + ++T
Sbjct: 322 MGLPDRCQHAAHIISEL--ILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEIT--Y 377
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQ 463
+P VIG G +I I + SGA V +Q PG I G Q++ A+
Sbjct: 378 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGVRIFTIRGVPQQIELARH 437
Query: 464 LIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNPGHAGHAGGYGSVY 515
LI + + G S P+ +P N A G+GS Y
Sbjct: 438 LIDEKVGGTSMGGPGGFGQS------PFNQAPTTPHQNGPQAFMTQGWGSTY 483
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAKEEPES 187
++ +L+PA KVG +IG+ GE IK++ E T + I I DGP P ++ + I+
Sbjct: 181 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPLRITGDAFKVQ 240
Query: 188 SLPPAMDGLLRVHKRI-VDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ ++R + G+ +D S G +VS VP G +IG+ G +K
Sbjct: 241 QAREMVLEIIREKDQADFRGVRNDFSSRMGGGSIEVS----VPRFAVGIVIGRNGEMIKK 296
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
IQ + VR+ + P + +RV +V+G A +I
Sbjct: 297 IQNDAG--VRI---QFKPDDGISPERVAQVMGLPDRCQHAAHII 335
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 145/356 (40%), Gaps = 53/356 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R +V +++ G IIG+ G+ + + +ET + + PG +R + ++
Sbjct: 46 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG---------- 95
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGTV 244
+ G R + + GL AP G GG V+ +LL+ +Q G++IG+QG +
Sbjct: 96 PLQGTARAYALVAKGL---LEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLKI 152
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 153 KHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLID---- 200
Query: 305 PLFEMHMQMPNPQMDHIPPPQ-SWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADL 363
Q + + P + S G + + G+N + +
Sbjct: 201 -----DWQRGTGTILYNPAVRASVGTGSSINTNTTASNGYNSRPYNRTGNGADFSDGQSA 255
Query: 364 PPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGAS 423
P Y P+ Q+ Q + IP +IG G+
Sbjct: 256 GYSRRSNPDTSNRGY----PLVTEDGEEIQT---------QNISIPADMVGCIIGRGGSK 302
Query: 424 ISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
I+ IRRSSGA ++I + GE I G+A + A L+ +N AE SQ
Sbjct: 303 ITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTRRSQ 358
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 15/176 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 24 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 83
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 84 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 140
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G TVK++ E S V++ P +RVV V G+ VHKA+ I L
Sbjct: 141 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKL 193
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 43/266 (16%)
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGD 279
G+ K+L+P+ AGS+IGK G T+ +Q+ + +++ ++D + +RV V G
Sbjct: 24 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF--YPGTTERVCLVQGT 81
Query: 280 ASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGP 339
A ++ I +R E+ M P++ +I PQ+ + P
Sbjct: 82 AEALNAVHSFIAEKVR------------EIPQAMTKPEVVNILQPQT---------TMNP 120
Query: 340 GYGHNPQYMPPPRQAESYYPP--ADLPPPMEK--------QPHQGISAYGREAPVN---- 385
+ + P A A + ME+ Q +GI+ R V+
Sbjct: 121 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE 180
Query: 386 -VHGSSNA--QSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI-QETR 441
VH + +A Q + + ++ +P + A++G G ++ + +GA + I ++
Sbjct: 181 QVHKAVSAIVQKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 240
Query: 442 GVPGEMT--VEISGTASQVQTAQQLI 465
+PG V I+G+ + Q AQ LI
Sbjct: 241 FLPGTRNRRVTITGSPAATQAAQYLI 266
>gi|380026049|ref|XP_003696774.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Apis florea]
Length = 514
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 117 GSTEKKWPGWPGESVF--RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
G+T++ G G+ + ++LVP G+IIG+ G+ I ++ ++T AR+K+ D PG
Sbjct: 30 GATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPG 89
Query: 172 TTERAVMISAKEEPESSLPPAMDGLL-RVHKR----IVDGLDSDSSHAPSGTGGKVSTKL 226
TTER +I+ E ++ MD ++ ++ ++ + +D +S + +V K+
Sbjct: 90 TTERVCLITGSLE---AIMAVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQV--KI 144
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LVP S AG +IGK G +K I+E V++ ++ +LQ +R + V+G+ A
Sbjct: 145 LVPNSTAGMIIGKAGNYIKQIKEECGSYVQI--SQKAKDVSLQ-ERCITVIGEKENNRNA 201
Query: 287 MELI 290
+ +I
Sbjct: 202 LMMI 205
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 207 LDSDS-------SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLG 259
LD D+ SH SG G K+LVP AG++IGK G T+ +Q+ + V++
Sbjct: 23 LDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSK 82
Query: 260 AEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ D + +RV + G + M+ I +R+
Sbjct: 83 SHDF--YPGTTERVCLITGSLEAIMAVMDFIMDKIRE 117
>gi|340714094|ref|XP_003395567.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus terrestris]
gi|350427987|ref|XP_003494948.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus impatiens]
Length = 514
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 117 GSTEKKWPGWPGESVF--RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
G+T++ G G+ + ++LVP G+IIG+ G+ I ++ ++T AR+K+ D PG
Sbjct: 30 GATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPG 89
Query: 172 TTERAVMISAKEEPESSLPPAMDGLL-RVHKR----IVDGLDSDSSHAPSGTGGKVSTKL 226
TTER +I+ E ++ MD ++ ++ ++ + +D +S + +V K+
Sbjct: 90 TTERVCLITGSLE---AIMAVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQV--KI 144
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LVP S AG +IGK G +K I+E V++ ++ +LQ +R + V+G+ A
Sbjct: 145 LVPNSTAGMIIGKAGNYIKQIKEECGSYVQI--SQKAKDVSLQ-ERCITVIGEKENNRNA 201
Query: 287 MELI 290
+ +I
Sbjct: 202 LMMI 205
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 207 LDSDS-------SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLG 259
LD D+ SH SG G K+LVP AG++IGK G T+ +Q+ + V++
Sbjct: 23 LDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSK 82
Query: 260 AEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ D + +RV + G + M+ I +R+
Sbjct: 83 SHDF--YPGTTERVCLITGSLEAIMAVMDFIMDKIRE 117
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTT 173
G T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTT
Sbjct: 52 GCTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 111
Query: 174 ERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG--KVS-TKLLVPA 230
ER +I E +S+ + +R + + S P T +V KL+VP
Sbjct: 112 ERVCLIQGTVEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPN 171
Query: 231 SQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
S AG +IGK G TVK++ E S V++ P +RVV + G+ KA+E+I
Sbjct: 172 STAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQNRKAVEII 228
>gi|432101641|gb|ELK29690.1| RNA-binding protein Nova-2 [Myotis davidii]
Length = 294
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 15/176 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 39 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 98
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R +V+ L ++ P KL+VP S AG +IG
Sbjct: 99 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKLIVPNSTAGLIIG 155
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G TVK++ E S V++ ++ LQ +RVV V G+ VHKA+ I L
Sbjct: 156 KGGATVKAVMEQSGAWVQL--SQKPEGINLQ-ERVVTVSGEPEQVHKAVSAIVQKL 208
>gi|355693195|gb|EHH27798.1| hypothetical protein EGK_18083, partial [Macaca mulatta]
Length = 488
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 102/225 (45%), Gaps = 46/225 (20%)
Query: 105 QEKQENEVNLAVGSTEKKWPGWP-----GESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 159
Q K+EN + +A T P G+ ++L+P+ GSIIG+ G+ I ++ +ET
Sbjct: 1 QNKRENLLPVAAAGTANMMAAAPIQQEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKET 60
Query: 160 RARIKI---LDGPPGTTERAVMIS------------------------AKEEPESSLPPA 192
A IK+ D PGTTER +I AK EP S L P
Sbjct: 61 GATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQ 120
Query: 193 MDGLLRVH-KRIVDGLDSDSSHAPSGTGGKVST------KLLVPASQAGSLIGKQGGTVK 245
V+ RI L S + S ++T K++VP S AG +IGK G TVK
Sbjct: 121 TT----VNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVK 176
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+I E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 177 AIMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 218
>gi|25012554|gb|AAN71378.1| RE36563p, partial [Drosophila melanogaster]
Length = 605
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
++LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+ E
Sbjct: 101 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 160
Query: 189 LPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ + +R + +IVD DS + K+LVP S AG +IGK G +
Sbjct: 161 VMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIGKGGAFI 214
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 215 KQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 261
>gi|358335626|dbj|GAA29562.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 673
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 21/143 (14%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
+ G F++LVP+ G+IIG+ GE I I +T A++K+ D PGTTER +I
Sbjct: 24 YEGNVHFKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVG- 82
Query: 183 EEPESSLPPAMDGLLRVHKRIVDGL--DSDSSHAPSGTGGKV------STKLLVPASQAG 234
+D +LRV + I + + +S + GG++ K+LVP S AG
Sbjct: 83 ---------TIDSILRVFQYISEKIYEKPESILRSTNKGGRMPAERHKQVKILVPNSTAG 133
Query: 235 SLIGKQGGTVKSIQEASNCIVRV 257
+IGK G +K ++E++ ++V
Sbjct: 134 IIIGKGGSFIKEVKESTGVFIQV 156
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 220 GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGD 279
G V K+LVP+ AG++IGK G + IQ ++ V++ A D + +RV +VG
Sbjct: 26 GNVHFKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDF--YPGTTERVCLIVGT 83
Query: 280 ASGVHKAMELI 290
+ + + I
Sbjct: 84 IDSILRVFQYI 94
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 143/356 (40%), Gaps = 68/356 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
FRML + +I+G+ GE I +I E + AR+ + + G ER + + P +
Sbjct: 82 FRMLCSINETAAIVGKGGETINRIKEMSSARVNVSENLKGIPERVITVRG---PAEYVAK 138
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A + R +D + A + +++ KLL P + G +IGK+G + I++ S
Sbjct: 139 AFGLITRAI------MDEPFNQASTVESKQINLKLLFPHTIIGYIIGKRGARFREIEDNS 192
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHM 311
L A D + DR++ + G A +H A + V +++I H
Sbjct: 193 AA---ALKASD-QILPASTDRILHITGVADAIHIAT---------YYVAQTVIE----HK 235
Query: 312 QMPNPQMDHIPPPQSWGPPQGLPPS---GGP------GYGHNPQYMPPPRQAESYYPPAD 362
Q H+ + P PS GG G G+ PQ M
Sbjct: 236 Q-------HLAKAVFYNPANCNQPSTPVGGNASRMAYGNGYPPQVM-------------Q 275
Query: 363 LPPPMEKQPHQGISA---YGREAPVNVHGSSNAQSTPSMITQ-----VTQQMQIPLSYAD 414
+P P+ + P+ G YG+ P G+ A M Q + Q + +P +
Sbjct: 276 VPAPIMQSPYMGQPVQQPYGQYIPGAAAGAVAAPVPAPMQAQSGQEKINQDIYVPQMHIG 335
Query: 415 AVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQ---VQTAQQLIQN 467
VIG G ++ IR +G V + + VPG +++ ++ +Q A LI N
Sbjct: 336 LVIGKGGKNLKDIRTITGCYVKVNDE--VPGATERKLTLMSTSPFAIQQAIMLINN 389
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 161/402 (40%), Gaps = 72/402 (17%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 136
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + S G ++L+PAS+ G +IGK G T+K +QE + V
Sbjct: 137 AKRLLGQIVDRCRNGPSFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTG--V 194
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-------------------- 295
+++ +D P+ D+ + + GD V +A E++ +R
Sbjct: 195 KMVMIQDGPL-PTGTDKPLRITGDPFKVQQAREMVLEIIREKDQADFRSVRGDFGSRMGG 253
Query: 296 --------KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+F V I EM ++ N I + P G+ P Q
Sbjct: 254 GSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 303
Query: 348 M-PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQ---STPSMITQVT 403
M PP R + + ++L + Q G +G A G S TP + ++T
Sbjct: 304 MGPPDRCQHAAHIISEL--ILTAQERDG---FGSLAVPRGRGRSRGDWSVGTPGGVQEIT 358
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQT 460
+P VIG G +I I + SGA V +Q P I G Q++
Sbjct: 359 --YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEV 416
Query: 461 AQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A+ LI + + +GA G +P++ PP+ P
Sbjct: 417 ARHLIDEKVGGTS------LGAPGAFGQSPFS----QPPATP 448
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAKEEPES 187
++ +L+PA KVG +IG+ GE IK++ E T + + I DGP P T++ + I+
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGTDKPLRITGD---PF 219
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTG-GKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ A + +L + R D D S G+ G S ++ VP G +IG+ G +K
Sbjct: 220 KVQQAREMVLEI-IREKDQADFRSVRGDFGSRMGGGSIEVSVPRFAVGIVIGRNGEMIKK 278
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
IQ + VR+ + P + +R +V+G A +I
Sbjct: 279 IQNDAG--VRI---QFKPDDGISPERAAQVMGPPDRCQHAAHII 317
>gi|383863655|ref|XP_003707295.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Megachile
rotundata]
Length = 535
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 16/167 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
++LVP G+IIG+ G+ I ++ ++T A++KI D PGTTER +I+ E +
Sbjct: 68 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLE---A 124
Query: 189 LPPAMDGLL-RVHKR----IVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+ MD ++ ++ ++ + +DS+S + +V K+LVP S AG +IGK G
Sbjct: 125 IMAVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQV--KILVPNSTAGMIIGKAGNY 182
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+K I+E S V++ ++ +LQ +R + V+G+ A+ +I
Sbjct: 183 IKQIKEESGSYVQI--SQKAKDVSLQ-ERCITVIGEKENNRNALMMI 226
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 17/140 (12%)
Query: 156 VEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAP 215
+ ++R R D G T+R+ S K L + KR L+ D+ +
Sbjct: 15 IADSRKRPLDCDAENGATKRSHYGSGKS------------LCYLRKR---ELERDTCNGV 59
Query: 216 SGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVE 275
G K+LVP AG++IGK G T+ +Q+ + V++ + D + +RV
Sbjct: 60 FHGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDF--YPGTTERVCL 117
Query: 276 VVGDASGVHKAMELIGSHLR 295
+ G + M+ I +R
Sbjct: 118 ITGSLEAIMAVMDFIMDKIR 137
>gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo sapiens]
gi|4098297|gb|AAD09223.1| Koc1 [Homo sapiens]
Length = 579
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 182/427 (42%), Gaps = 69/427 (16%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPG-----WPGESVFRMLVPAQKVGSIIGR 147
+P+++ + + LQ+ + GS+ + PG P + R+LVP Q VG+IIG+
Sbjct: 154 IPDEMAAQQNPLQQPRGRRGLGQRGSSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGK 213
Query: 148 KGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV-HKRIVD 205
+G I+ I ++T+++I + G E+++ I + E S+ A +L + HK D
Sbjct: 214 EGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSA---ACKSILEIMHKEAQD 270
Query: 206 GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV 265
++ ++ K+L + G LIGK+G +K I++ ++ + + ++L +
Sbjct: 271 IKFTE----------EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL 320
Query: 266 FALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRSIIPLFEMHMQMPNPQ 317
+ +R + V G+ KA E I +R+ + +IP ++ P
Sbjct: 321 Y--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPP 378
Query: 318 MDHIPPPQSWGPPQGLPP--------------------SGGPGYGHNPQYMPPPRQ---A 354
+PPP S GPP + P S G G Q++ + A
Sbjct: 379 TSGMPPPTS-GPPSAMTPPYPQFEQSETETVHQFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 355 ESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVHGSSNAQS--TPSMITQVTQQM 406
PA+ P + P A GR ++G ++ +P ++ +
Sbjct: 438 SIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IYGKIKEENFVSPKEEVKLEAHI 492
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEISGTASQVQTAQQL 464
++P A VIG G +++ ++ S A V + +T ++ V+I+G Q AQ+
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRK 552
Query: 465 IQNFMAE 471
IQ + +
Sbjct: 553 IQEILTQ 559
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G IK I ++T++R+ I G E+ V I A E S
Sbjct: 140 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 197
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A +L + ++ D + +V K+L G LIGK+G +K I+
Sbjct: 198 -ACRMILEIMQKEAD---------ETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHE 247
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G A I LR+ FE
Sbjct: 248 TGTKITISSLQDLSIY--NPERTITVRGTIEACANAEIEIMKKLRE---------AFEND 296
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
M N Q + IP GL S + +PPP P +PP
Sbjct: 297 MLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPP------AGPRGVPPSPPYH 341
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
P S Y + H S Q T + IP A+IG GA I + R
Sbjct: 342 PFATHSGYF-SSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARF 400
Query: 431 SGATVTI 437
+GA++ I
Sbjct: 401 AGASIKI 407
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 368 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 424
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 425 -----PP--EAQFKAQGRIFGKLKEENFFNPK-EEVKLEAHIRVPSSTAGRVIGKGGKTV 476
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 477 NELQNLTSAEVIV 489
>gi|408395856|gb|EKJ75028.1| hypothetical protein FPSE_04740 [Fusarium pseudograminearum CS3096]
Length = 372
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 154/366 (42%), Gaps = 61/366 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + I+
Sbjct: 48 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG--------- 98
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
D + R + + L AP+ G GG V + KLL+ +Q G++IG+QG
Sbjct: 99 -GCDAISRAYAIVARAL---LEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLK 154
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD--- 300
+K IQ+AS VR++ +++ +R+VEV G G+ +A+ + K LVD
Sbjct: 155 IKHIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIQRAI----WEICKCLVDDWQ 206
Query: 301 RSIIPLFEMHMQMPNPQMDHIPPPQSWGPP-----QGLPPSGGPGYGHNPQYMPPPRQAE 355
R + + NP + P QG SG YG +P+ M A+
Sbjct: 207 RGTGTV------LYNPVVRTQPSSSGSTSGGAGFNQG---SGRSDYGGSPRVMRTGNGAD 257
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
+ P + A R P + Q TQ + IP
Sbjct: 258 --FSNGSSRPYNRRSDS---DAALRGPPTHDENGEEIQ---------TQNISIPADMVGC 303
Query: 416 VIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAA 473
+IG AG+ IS IR++SGA ++I + GE I GTA ++A L+ +N AE
Sbjct: 304 IIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENLEAEKM 363
Query: 474 APSQAQ 479
SQ Q
Sbjct: 364 RRSQLQ 369
>gi|327289205|ref|XP_003229315.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 507
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 15/172 (8%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEE 184
GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER ++ E
Sbjct: 68 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE 127
Query: 185 PESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
+++ + +R V V+ L ++ P K++VP S AG +IG
Sbjct: 128 ALNAVHNFIAEKVREIPQSVVKPESVNILQPQTTMNPDRAK---QAKVIVPNSTAGLIIG 184
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
K G TVK+I E S V++ P +RVV + G+ +HKA+++I
Sbjct: 185 KGGATVKAIMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQIHKAVDII 233
>gi|195445981|ref|XP_002070572.1| GK10958 [Drosophila willistoni]
gi|194166657|gb|EDW81558.1| GK10958 [Drosophila willistoni]
Length = 578
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
G+S + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 62 GDSTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 183 EEP-ESSLPPAMDGLLR---VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E + L MD + + +I+D + K+LVP S AG +IG
Sbjct: 122 TEGIMTVLDFIMDKIREKPDLTTKIIDAESKQTQERDK------QVKILVPNSTAGMIIG 175
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ ++ +LQ +R + ++GD A ++I S +
Sbjct: 176 KGGAFIKQIKEESGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSKI 228
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 153/399 (38%), Gaps = 66/399 (16%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 85 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 137
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G +LL+PAS+ G +IGK G T+K +QE + +
Sbjct: 138 AKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKM 197
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-------------------- 295
++ LP A D+ + + GD V +A E++ +R
Sbjct: 198 VMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSSRMGG 254
Query: 296 --------KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+F V I EM ++ N I + P G+ P Q
Sbjct: 255 GSLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 304
Query: 348 M-PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
M PP R + + +L + Q G + TP + ++T
Sbjct: 305 MGPPDRCQHAAHVINEL--ILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGVQEIT--Y 360
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQ 463
+P VIG G +I I + SGA V +Q P I G Q++ A+
Sbjct: 361 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARH 420
Query: 464 LIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
LI + + +GA G +P++ PP+ P
Sbjct: 421 LIDEKVGGTS------LGAPGAFGQSPFS----QPPAAP 449
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAK-EEPE 186
++ +L+PA KVG +IG+ GE IK++ E T + + I DGP P ++ + I+ + +
Sbjct: 164 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 223
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ ++ + + G+ D S G +VS VP G +IG+ G +K
Sbjct: 224 QAREMVLEIIREKDQADFRGVRGDFSSRMGGGSLEVS----VPRFAVGIVIGRNGEMIKK 279
Query: 247 IQE 249
IQ
Sbjct: 280 IQN 282
>gi|390177068|ref|XP_003736271.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388858895|gb|EIM52344.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 40 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 99
Query: 183 EEP-ESSLPPAMDGLLR---VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E L MD + + +I+D + K+LVP S AG +IG
Sbjct: 100 TEAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDK------QVKILVPNSTAGMIIG 153
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ ++ +LQ +R + ++GD A ++I S +
Sbjct: 154 KGGAFIKQIKEDSGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSKI 206
>gi|344271275|ref|XP_003407465.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3-like [Loxodonta africana]
Length = 625
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 160/400 (40%), Gaps = 68/400 (17%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 136
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G ++L+PAS+ G +IGK G T+K +QE + +
Sbjct: 137 AKRLLGQIVDRCRNGPGFHNDIDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKM 196
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-----FLVDRS-------- 302
++ LP A D+ + + GD V +A E++ +R+ F RS
Sbjct: 197 VMIQDGPLPXGA---DKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRSDFSSRMGG 253
Query: 303 -----IIPLF----------EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+P F EM ++ N I + P G+ P Q
Sbjct: 254 GSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 303
Query: 348 MPPPRQAE--SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQ 405
M PP + + +++ + E+ G+S S TP + ++T
Sbjct: 304 MGPPDRCQHAAHFINELILTAQERDGFGGLSVARGRGRGRGDWSVG---TPGGVQEIT-- 358
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQ 462
+P VIG G +I I + SGA V +Q P I G Q++ A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGVPQQIEVAR 418
Query: 463 QLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
LI + A+ +GA G +P++ PP+ P
Sbjct: 419 HLIDEKVGGAS------LGAPGAFGQSPFS----QPPAAP 448
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAK-EEPESSLP 190
+L+PA KVG +IG+ GE IK++ E T + + I DGP P ++ + I+ + + +
Sbjct: 167 ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPXGADKPLRITGDPFKVQQARE 226
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
++ + + G+ SD S G +VS VP G +IG+ G +K IQ
Sbjct: 227 MVLEIIREKDQADFRGVRSDFSSRMGGGSIEVS----VPRFAVGIVIGRNGEMIKKIQN 281
>gi|301771920|ref|XP_002921378.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 2 [Ailuropoda melanoleuca]
Length = 582
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 63/313 (20%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSII 304
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+ +
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYEN---- 353
Query: 305 PLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
+ M++Q H+ P + PP+ G MPPP PP+ +
Sbjct: 354 DIASMNLQA------HLIPGLNLNALGLFPPTSG---------MPPPTSG----PPSAMT 394
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
PP PH +++ R + T + IP A+IG G I
Sbjct: 395 PPY---PH---NSFTRSSETE-----------------TVHLFIPALSVGAIIGKQGQHI 431
Query: 425 SYIRRSSGATVTI 437
+ R +GA++ I
Sbjct: 432 KQLSRFAGASIKI 444
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEEPESSLPPA 192
+ +PA VG+IIG++G+ IK++ A IKI P R V+I+ PP
Sbjct: 413 LFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITG--------PP- 463
Query: 193 MDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASN 252
+ + RI + ++ +P K+ + VP+ AG +IGK G TV +Q S+
Sbjct: 464 -EAQFKAQGRIYGKIKEENFVSPK-EEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSS 521
Query: 253 CIVRV 257
V V
Sbjct: 522 AEVVV 526
>gi|380026051|ref|XP_003696775.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Apis florea]
Length = 522
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 117 GSTEKKWPGWPGESVF--RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
G+T++ G G+ + ++LVP G+IIG+ G+ I ++ ++T AR+K+ D PG
Sbjct: 30 GATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPG 89
Query: 172 TTERAVMISAKEEPESSLPPAMDGLL-RVHKR----IVDGLDSDSSHAPSGTGGKVSTKL 226
TTER +I+ E ++ MD ++ ++ ++ + +D +S + +V K+
Sbjct: 90 TTERVCLITGSLE---AIMAVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQV--KI 144
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
LVP S AG +IGK G +K I+E V++ ++ +LQ +R + V+G+ A
Sbjct: 145 LVPNSTAGMIIGKAGNYIKQIKEECGSYVQI--SQKAKDVSLQ-ERCITVIGEKENNRNA 201
Query: 287 MELI 290
+ +I
Sbjct: 202 LMMI 205
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 207 LDSDS-------SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLG 259
LD D+ SH SG G K+LVP AG++IGK G T+ +Q+ + V++
Sbjct: 23 LDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSK 82
Query: 260 AEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
+ D + +RV + G + M+ I +R
Sbjct: 83 SHDF--YPGTTERVCLITGSLEAIMAVMDFIMDKIR 116
>gi|125773159|ref|XP_001357838.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|54637571|gb|EAL26973.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 570
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 62 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 183 EEP-ESSLPPAMDGLLR---VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E L MD + + +I+D + K+LVP S AG +IG
Sbjct: 122 TEAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDK------QVKILVPNSTAGMIIG 175
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ ++ +LQ +R + ++GD A ++I S +
Sbjct: 176 KGGAFIKQIKEDSGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSKI 228
>gi|47229298|emb|CAG04050.1| unnamed protein product [Tetraodon nigroviridis]
Length = 455
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 16/117 (13%)
Query: 139 QKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLR 198
Q+VGSIIG+KGE +KK+ EE+ ARI I +G ER + ++ P +S + +
Sbjct: 50 QEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTTS-------IFK 97
Query: 199 VHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
I++ L+ D S + + + V+ +L+VPASQ GSLIGK G +K I+E S
Sbjct: 98 AFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIREVS 154
>gi|30795212|ref|NP_006538.2| insulin-like growth factor 2 mRNA-binding protein 3 [Homo sapiens]
gi|114612360|ref|XP_001157593.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 4 [Pan troglodytes]
gi|397472938|ref|XP_003807987.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3 [Pan
paniscus]
gi|254763311|sp|O00425.2|IF2B3_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=KH
domain-containing protein overexpressed in cancer;
Short=hKOC; AltName: Full=VICKZ family member 3
gi|4191612|gb|AAD09828.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|40807047|gb|AAH65269.1| Insulin-like growth factor 2 mRNA binding protein 3 [Homo sapiens]
gi|51095013|gb|EAL24257.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|119614193|gb|EAW93787.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Homo sapiens]
gi|261861412|dbj|BAI47228.1| insulin-like growth factor 2 mRNA binding protein 3 [synthetic
construct]
gi|410216456|gb|JAA05447.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410260770|gb|JAA18351.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410287810|gb|JAA22505.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410334615|gb|JAA36254.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
Length = 579
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 182/427 (42%), Gaps = 69/427 (16%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPG-----WPGESVFRMLVPAQKVGSIIGR 147
+P+++ + + LQ+ + GS+ + PG P + R+LVP Q VG+IIG+
Sbjct: 154 IPDEMAAQQNPLQQPRGRRGLGQRGSSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGK 213
Query: 148 KGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV-HKRIVD 205
+G I+ I ++T+++I + G E+++ I + E S+ A +L + HK D
Sbjct: 214 EGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSA---ACKSILEIMHKEAQD 270
Query: 206 GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV 265
++ ++ K+L + G LIGK+G +K I++ ++ + + ++L +
Sbjct: 271 IKFTE----------EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL 320
Query: 266 FALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRSIIPLFEMHMQMPNPQ 317
+ +R + V G+ KA E I +R+ + +IP ++ P
Sbjct: 321 Y--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPP 378
Query: 318 MDHIPPPQSWGPPQGLPP--------------------SGGPGYGHNPQYMPPPRQ---A 354
+PPP S GPP + P S G G Q++ + A
Sbjct: 379 TSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 355 ESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVHGSSNAQS--TPSMITQVTQQM 406
PA+ P + P A GR ++G ++ +P ++ +
Sbjct: 438 SIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IYGKIKEENFVSPKEEVKLEAHI 492
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEISGTASQVQTAQQL 464
++P A VIG G +++ ++ S A V + +T ++ V+I+G Q AQ+
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRK 552
Query: 465 IQNFMAE 471
IQ + +
Sbjct: 553 IQEILTQ 559
>gi|195158519|ref|XP_002020133.1| GL13824 [Drosophila persimilis]
gi|194116902|gb|EDW38945.1| GL13824 [Drosophila persimilis]
Length = 554
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 68 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 127
Query: 183 EEP-ESSLPPAMDGLLR---VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E L MD + + +I+D + K+LVP S AG +IG
Sbjct: 128 TEAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDK------QVKILVPNSTAGMIIG 181
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ ++ +LQ +R + ++GD A ++I S +
Sbjct: 182 KGGAFIKQIKEDSGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSKI 234
>gi|302800040|ref|XP_002981778.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
gi|300150610|gb|EFJ17260.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
Length = 310
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 142/346 (41%), Gaps = 89/346 (25%)
Query: 125 GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISA 181
G +S R LV + GS+IG+ G I + ++ ARI++ D PGTT+R V++S
Sbjct: 31 GNGSQSSARFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSG 90
Query: 182 KEEPESSLPPAMDGLL-RVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQ 240
+ + A++ +L ++ K D DS + P+ +L+VP S G++IGK
Sbjct: 91 ---AINDVLTALNLILSKIQKETED--DSQTDSKPN------QLRLVVPNSVCGAIIGKG 139
Query: 241 GGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
GGT+KS E S +++ G + DR+V + G KA+ELI L K L D
Sbjct: 140 GGTIKSFIEDSEASIKLSG-----ILQGISDRLVTITGSIEQQLKAVELI---LTKLLGD 191
Query: 301 RSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPP 360
S +D+ P S+ + P YP
Sbjct: 192 SS--------------YLDYAAAPLSYTV-----------ICFKLFRLAP-------YPV 219
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTA 420
L P +E P + T +T + +P + A++G
Sbjct: 220 --LLPVLESCP--------------------------VTTSIT--LAVPDEHIGAIVGRG 249
Query: 421 GASISYIRRSSGATVTIQE----TRGVPGEMTVEISGTASQVQTAQ 462
G ++ I+++SG T+ I E G V + GTA +Q AQ
Sbjct: 250 GKTLGEIQQASGVTIKISERGDFVSGTKNSRKVTLVGTAEGLQIAQ 295
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 212 SHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDD 271
S + G G + S + LV ++AGS+IGK G T+ +Q S +++ ++D F D
Sbjct: 26 SSSEDGNGSQSSARFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDF--FPGTTD 83
Query: 272 RVVEVVGDASGVHKAMELIGSHLRK 296
RVV + G + V A+ LI S ++K
Sbjct: 84 RVVVLSGAINDVLTALNLILSKIQK 108
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 23/163 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++
Sbjct: 17 IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---------- 64
Query: 192 AMDGLLRVHKRIVDGLDSDSSH---APSGTGGK----VSTKLLVPASQAGSLIGKQGGTV 244
+ + + + I + S SG G ++ +L+VPASQ GSLIGK G +
Sbjct: 65 STNAIFKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKI 124
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
K I+E + ++V +E LP +R V + G + + +
Sbjct: 125 KEIREVTGASIQV-ASEMLPN---STERAVTISGTGEAITQCI 163
>gi|442618212|ref|NP_001262414.1| pasilla, isoform Q [Drosophila melanogaster]
gi|440217246|gb|AGB95796.1| pasilla, isoform Q [Drosophila melanogaster]
Length = 517
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
++LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+ E
Sbjct: 13 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 72
Query: 189 LPPAMDGLLR----VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ + +R + +IVD DS + K+LVP S AG +IGK G +
Sbjct: 73 VMEFIMDKIREKPDLTNKIVD-TDSKQTQERDK-----QVKILVPNSTAGMIIGKGGAFI 126
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K I+E S V++ P +R + ++GD A ++I S +
Sbjct: 127 KQIKEESGSYVQI---SQKPTDVSLQERCITIIGDKENNKNACKMILSKI 173
>gi|109067156|ref|XP_001098422.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 3 [Macaca mulatta]
gi|402863939|ref|XP_003896249.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Papio anubis]
Length = 579
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 182/427 (42%), Gaps = 69/427 (16%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPG-----WPGESVFRMLVPAQKVGSIIGR 147
+P+++ + + LQ+ + GS+ + PG P + R+LVP Q VG+IIG+
Sbjct: 154 IPDEMAAQQNPLQQPRGRRGLGQRGSSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGK 213
Query: 148 KGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV-HKRIVD 205
+G I+ I ++T+++I + G E+++ I + E S+ A +L + HK D
Sbjct: 214 EGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSA---ACKSILEIMHKEAQD 270
Query: 206 GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV 265
++ ++ K+L + G LIGK+G +K I++ ++ + + ++L +
Sbjct: 271 IKFTE----------EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL 320
Query: 266 FALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRSIIPLFEMHMQMPNPQ 317
+ +R + V G+ KA E I +R+ + +IP ++ P
Sbjct: 321 Y--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPP 378
Query: 318 MDHIPPPQSWGPPQGLPP--------------------SGGPGYGHNPQYMPPPRQ---A 354
+PPP S GPP + P S G G Q++ + A
Sbjct: 379 TSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 355 ESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVHGSSNAQS--TPSMITQVTQQM 406
PA+ P + P A GR ++G ++ +P ++ +
Sbjct: 438 SIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IYGKIKEENFVSPKEEVKLEAHI 492
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEISGTASQVQTAQQL 464
++P A VIG G +++ ++ S A V + +T ++ V+I+G Q AQ+
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRK 552
Query: 465 IQNFMAE 471
IQ + +
Sbjct: 553 IQEILTQ 559
>gi|449266765|gb|EMC77781.1| Far upstream element-binding protein 3, partial [Columba livia]
Length = 508
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 162/404 (40%), Gaps = 46/404 (11%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ +P +++
Sbjct: 73 VPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTG-------MPESIEQ 125
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G ++L+PAS+ G +IGK G T+K +QE + +
Sbjct: 126 AKRLLGQIVDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKM 185
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKA----MELIG----SHLRKFLVDRSI---- 303
++ LP A D+ + + GDA V +A +E+I + R D S
Sbjct: 186 IMIQDGPLPTGA---DKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRNDFSSRMGG 242
Query: 304 ------IPLFEMHMQM-PNPQMDHIPPPQS-WGPPQGLPPSGGPGYGHNPQYMP-PPRQA 354
+P F + + + N +M I Q+ G P G Q M P R
Sbjct: 243 GSIEVSVPRFAVGIVIGRNGEM--IKKIQNDAGVRIQFKPDDGISSERVAQVMGLPDRCQ 300
Query: 355 ESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYAD 414
+ + ++L + Q G + + TP + ++T +P
Sbjct: 301 HAAHIISELI--LTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEIT--YTVPADKCG 356
Query: 415 AVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQLIQNFMAE 471
VIG G +I I + SGA V +Q PG I G Q++ A+ LI +
Sbjct: 357 LVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGVRIFTIRGVPQQIELARHLIDEKVGG 416
Query: 472 AAAPSQAQMGASADQGYNPYASMYGSPPSNPGHAGHAGGYGSVY 515
+ G NP++ +P N A G+GS Y
Sbjct: 417 TSMGG------PGGFGQNPFSQAPATPHQNGPQAFMTQGWGSTY 454
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAKEEPES 187
++ +L+PA KVG +IG+ GE IK++ E T + I I DGP P ++ + I+
Sbjct: 152 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDAFKVQ 211
Query: 188 SLPPAMDGLLRVHKRI-VDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ ++R + G+ +D S G +VS VP G +IG+ G +K
Sbjct: 212 QAREMVLEIIREKDQADFRGVRNDFSSRMGGGSIEVS----VPRFAVGIVIGRNGEMIKK 267
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
IQ + VR+ + P + +RV +V+G A +I
Sbjct: 268 IQNDAG--VRI---QFKPDDGISSERVAQVMGLPDRCQHAAHII 306
>gi|430813652|emb|CCJ29027.1| unnamed protein product [Pneumocystis jirovecii]
Length = 383
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 156/375 (41%), Gaps = 69/375 (18%)
Query: 121 KKWPGWPGESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI 179
+++ G+ G V R LV ++ G IIGR+G+ + ++ + + P +R + I
Sbjct: 62 EEYDGYGGSQVTLRALVSTKEAGIIIGRQGKNVAELRGANGIKAGVSKVVPNIHDRVLTI 121
Query: 180 SAKEEPESSLPPAMDGLLRVHKRIVDGLDSD-----SSHAPSGTGGKVSTKLLVPASQAG 234
S ++DG+ + + I + ++HA S + + S +LL+ + G
Sbjct: 122 SG----------SLDGVSKAYAAIAQAFIDNPIGHSTNHASSSSEPQSSIRLLISHNMMG 171
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
++IG+QG +K IQ+ S R++ ++ + +R+VEV G S + A+ IG
Sbjct: 172 TIIGRQGLKIKHIQDLSGA--RMIAFKE--ILPQSTERIVEVQGVVSSIQTAIWEIG--- 224
Query: 295 RKFLVD---RSIIPLFEMHMQMPNPQM----DHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
K L+D R I +F NP + +P Q G P GH QY
Sbjct: 225 -KCLIDDWERGIGTVF------YNPSLRLSSTLVPGHQGNSILSGAQP------GHYLQY 271
Query: 348 MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQ 407
Q +Y ++P ++ P++ +SN Q +
Sbjct: 272 QRQSSQM-NYSRLGNMPSHFQE-------------PLD---TSNQDIR-------VQNIS 307
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTA-QQLI 465
IP +IG G+ IS IRR SG+ ++I + GE I GTAS + A L
Sbjct: 308 IPSDMVGCIIGRGGSKISEIRRISGSKISIAKAPHDETGERMFTIQGTASSNEKALYMLF 367
Query: 466 QNFMAEAAAPSQAQM 480
Q AE Q +
Sbjct: 368 QTLEAEKNRRGQENL 382
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 151/343 (44%), Gaps = 61/343 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
R LV G IIG+ G I + ++ ARI++ + PGT +R +M+S +
Sbjct: 13 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFD---E 69
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ AM+ +L K + +G +S+ + A + +L+VP S G +IGK G T+KS
Sbjct: 70 VIKAMELIL--EKLLAEGEESNEAEA------RPKVRLVVPNSSCGGIIGKGGSTIKSFI 121
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
E S+ +++ +D L DR+V V G +A+ LI S L + +
Sbjct: 122 EDSHAGIKI-SPQDNNFVGLH-DRLVTVTGPLDHQMRAIYLILSKLSEDV---------- 169
Query: 309 MHMQMPNPQMDHIPPPQSW-GPPQGLPPSGGPGYGHNP-QYMPPPRQAESYYPPADLPPP 366
H PP S P GL G P Y P YM P P
Sbjct: 170 -----------HYPPNLSSPFPYAGL---GFPSYPGVPVGYMIP-------------QVP 202
Query: 367 MEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISY 426
+ G + YG N S+ +S + Q + + I + AV+G AG +I+
Sbjct: 203 YNNAVNYGPNGYGGRYQ-NNKPSTPMRSPANNDAQDSLTIGIADEHIGAVVGRAGRNITE 261
Query: 427 IRRSSGATVTIQETRG--VPG--EMTVEISGTASQVQTAQQLI 465
I ++SGA + I + RG + G E V I+GT+ +Q A+ +I
Sbjct: 262 IIQASGARIKISD-RGDFIAGTSERKVTITGTSEAIQAAESMI 303
>gi|449303999|gb|EMD00007.1| hypothetical protein BAUCODRAFT_359485 [Baudoinia compniacensis
UAMH 10762]
Length = 471
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 144/367 (39%), Gaps = 63/367 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R ++ + + + IG+ GE + +I A+ + + G ER + +S
Sbjct: 148 MRAIISSAEAATTIGKGGENVSQIRRLAGAKCTVSEYTRGAVERILTVSGH--------- 198
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + I+ L+ + PS K +LL+P GS+IGKQG ++ IQEA
Sbjct: 199 -VDAVAKAFGLIIRTLNQEPLEEPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEA 257
Query: 251 S--------NCI-------VRVLGAEDLPVFALQ--DDRVVEVVGDASGVHKAMELIGSH 293
S +C+ + VLG D A +VE + D G A G H
Sbjct: 258 SGARLNASESCLPLSTERSLVVLGVADAVHIATYYVGSTLVEQLTDRFGGPAASNYAGRH 317
Query: 294 LRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQ 353
V + + Q QM H + PPQ P+ GP YG + PP+Q
Sbjct: 318 GGPQGVVPGGMQVVPYVPQNAGGQMGHPDSYRKHAPPQQRTPAPGP-YGMPYMHGQPPQQ 376
Query: 354 AESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYA 413
P +P QP +TQQ+ IP
Sbjct: 377 QPQQGMPGMVP----GQP------------------------------ITQQIFIPNDMV 402
Query: 414 DAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
A+IG GA I+ IR+ SG+ + I E + E V I+GT Q A ++ + + E++
Sbjct: 403 GAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQMALYMLYSRLGESS 462
Query: 474 APSQAQM 480
S A M
Sbjct: 463 KNSNAVM 469
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LV + VG+IIGR G I++I +++RAR+ + G+ E+ + I E S+
Sbjct: 208 LRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKENAGSLEKVITIYGNPENCST-- 265
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
++I++ + ++S+ G V K+L + G +IGK G T+K I E
Sbjct: 266 --------ACQKILEVMQQEASNTNR---GDVPLKILAHNNLIGRIIGKSGNTIKRIMEQ 314
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
++ + V D AL +RV+ + G GV +A +L+ + LR+
Sbjct: 315 TDTKITVSSLHDGS--ALHLERVITIKGKPEGVCRAEQLVSAKLRQ 358
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 24/148 (16%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL----DGPPGTTERAVMISAKEEPESSL 189
+ +P VG+IIG G I+ ++ + A IK+ D P ER V I E +
Sbjct: 448 LYIPNTAVGAIIGTGGSSIRDMIMLSGASIKVAQPNKDDPADAHERKVTIVGTPECQ--- 504
Query: 190 PPAMDGLLRVHKRIVDGLDSDSSHA-PSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
R I + + + P GT + ++ VP++Q G +IGK G TV+ +Q
Sbjct: 505 -------WRAQSMIFNKVCYEGCMGNPDGT---LRVEIFVPSNQVGRIIGKGGQTVRELQ 554
Query: 249 EASNCIVRV------LGAEDLPVFALQD 270
+ ++++ E+ PV L D
Sbjct: 555 RLTRALIKLPEESQNANTEETPVHILGD 582
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 127/322 (39%), Gaps = 66/322 (20%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTER 175
GS++ + +P R+LVP Q VG+IIG++G IK I ++T++R+ I G E+
Sbjct: 183 GSSQARQIDFP----LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEK 238
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
V I A E S A +L + ++ D + ++ K+L G
Sbjct: 239 PVTIHATPEGTSE---ACRMILEIMQKEAD---------ETKLAEEIPLKILAHNGLVGR 286
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGK+G +K I+ + + + +DL ++ +R + V G A I LR
Sbjct: 287 LIGKEGRNLKKIEHETGTKITISSLQDLSIY--NPERTITVKGTVEACANAEIEIMKKLR 344
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
+ FE M N Q + IP GL S + +PPP
Sbjct: 345 E---------AFENDMLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPPS--- 383
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
P PP P+ + Y + VN+ IP A
Sbjct: 384 ---GPRGAPPAA---PYHPFAQYPEQEIVNLF--------------------IPTQAVGA 417
Query: 416 VIGTAGASISYIRRSSGATVTI 437
+IG GA I + R +GA++ I
Sbjct: 418 IIGKKGAHIKQLARFAGASIKI 439
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISA 181
+ +P + + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 397 FAQYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG 456
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
PP + + RI L ++ P K+ + VP+S AG +IGK G
Sbjct: 457 --------PP--EAQFKAQGRIFGKLKEENFFNPK-EEVKLEAHIRVPSSTAGRVIGKGG 505
Query: 242 GTVKSIQEASNCIVRV 257
TV +Q ++ V V
Sbjct: 506 KTVNELQNLTSAEVIV 521
>gi|392578180|gb|EIW71308.1| hypothetical protein TREMEDRAFT_42752 [Tremella mesenterica DSM
1558]
Length = 299
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + I E + AR+ + + PG ER + +S
Sbjct: 1 MRCLIVTQDASIIIGKGGAHVNDIRERSHARVTVSESIPGNPERILNVSGP--------- 51
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + S G + V+ K ++P S+ GS+IGKQG +K IQEA
Sbjct: 52 -LDAVAKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGKQGAKIKEIQEA 110
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
S R+ +E + +RV+ G A +H A+ IG+ L ++
Sbjct: 111 SGA--RLNASESM--LPGSTERVLSCSGVADAIHIAVYYIGTILLEY 153
>gi|326934067|ref|XP_003213117.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Meleagris gallopavo]
Length = 553
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 158/379 (41%), Gaps = 57/379 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G I+ I ++T+++I + G E+A+ I + E
Sbjct: 175 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPE------ 228
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
G K I++ + ++ + T +V K+L + G LIGK+G +K +++
Sbjct: 229 ----GCSAACKMILEIMQKEAKD--TKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQD 282
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G KA + I +R+ + + H
Sbjct: 283 TETKITISSLQDLTLY--NPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSH 340
Query: 311 MQMPNPQMDHI---PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
+ +P + + P + PP PPS G +MPP ++ + PA +
Sbjct: 341 L-IPGLNLAAVGLFPASSNAVPP---PPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAI 396
Query: 368 EKQPHQGISAYGREAP-----------------VNVHGSSNAQST--------------- 395
+ Q I R A V + G AQ
Sbjct: 397 IGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFF 456
Query: 396 -PSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEIS 452
P ++ +++P S A VIG G +++ ++ + A V + +T ++ V+I
Sbjct: 457 GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKII 516
Query: 453 GTASQVQTAQQLIQNFMAE 471
G Q AQ+ I++ +A+
Sbjct: 517 GHFYASQMAQRKIRDILAQ 535
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE---RAVMISAKE 183
P + + +PAQ VG+IIG+KG+ IK++ A IKI PP T + R V+I+
Sbjct: 379 PEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI--APPETPDSKVRMVVITG-- 434
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PP + + RI L ++ P K+ T + VPAS AG +IGK G T
Sbjct: 435 ------PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLETHIRVPASAAGRVIGKGGKT 485
Query: 244 VKSIQEAS 251
V +Q +
Sbjct: 486 VNELQNLT 493
>gi|390177066|ref|XP_003736270.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388858894|gb|EIM52343.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 576
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 128 GESVFRM--LVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAK 182
GE+ + M LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+
Sbjct: 68 GETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 127
Query: 183 EEP-ESSLPPAMDGLLR---VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIG 238
E L MD + + +I+D + K+LVP S AG +IG
Sbjct: 128 TEAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDK------QVKILVPNSTAGMIIG 181
Query: 239 KQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K G +K I+E S V++ ++ +LQ +R + ++GD A ++I S +
Sbjct: 182 KGGAFIKQIKEDSGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSKI 234
>gi|334343559|ref|XP_003341817.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Monodelphis
domestica]
Length = 367
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
RM++ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 19 TLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG--------- 67
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D P G V+ +L++PASQ GSLIGK G +K
Sbjct: 68 -STGAVFHAVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEA 250
I+E+
Sbjct: 127 IRES 130
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 118/298 (39%), Gaps = 38/298 (12%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++++ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPG 340
V A+ +I L + D P + P + + P G G G
Sbjct: 70 GAVFHAVSMIAFKLDE---DLCTGPPNGGSISKPPVTLRLVIPASQCGSLI-----GKAG 121
Query: 341 YGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQ------- 393
PP+ A Y P+ + +QG S G+ V S Q
Sbjct: 122 TKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGTVTPAEVSKLQQLSGHPV 181
Query: 394 --STPSMITQV-------TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVP 444
++PS++ + +Q+ +P VIG G+ IS IR+ SGA + I
Sbjct: 182 PFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGS 241
Query: 445 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
GE V I+G+ + AQ LI + A + S G+ P+ SPP P
Sbjct: 242 GERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSGTADLSAPF-----SPPLAP 294
>gi|299753134|ref|XP_001833083.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|298410159|gb|EAU88772.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 382
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 86 MRCLIVTQDASIIIGKGGAHVNEIREKSGARVMVSESIPGNPERILNVSGP--------- 136
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G +K IQ+A
Sbjct: 137 -LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKAGCKIKEIQDA 195
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S R+ +E + +RV+ V G A +H A IG+ L
Sbjct: 196 SGA--RLNASEGM--LPGSTERVLSVAGVADAIHIATYYIGNIL 235
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQ 459
VT + IP S +VIG AG I I+ +SGA + E +PG E + ++G A +
Sbjct: 167 VTIKFMIPNSRMGSVIGKAGCKIKEIQDASGARLNASEGM-LPGSTERVLSVAGVADAIH 225
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYNPYA 492
A I N + EA ++ +S Y P A
Sbjct: 226 IATYYIGNILIEA----NERLPSSNGSSYRPMA 254
>gi|354502186|ref|XP_003513168.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Cricetulus griseus]
Length = 574
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 140/362 (38%), Gaps = 56/362 (15%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 136
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G +LL+PAS+ G +IGK G T+K +QE + +
Sbjct: 137 AKRLLGQIVDRCRNGPGFHNDIDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKM 196
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-------------------- 295
++ LP A D+ + + GD V +A E++ +R
Sbjct: 197 VMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFASRAGG 253
Query: 296 --------KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+F V I EM ++ N I + P G+ P Q
Sbjct: 254 GSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 303
Query: 348 M-PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
M PP R + + +L + Q G+ + TP + ++T
Sbjct: 304 MGPPDRCQHAAHIINEL--ILTAQERDGLGGLAVARGRGRGRGDWSVGTPGGVQEIT--Y 359
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQ 463
+P VIG G +I I + SGA V +Q P I G Q++ A+
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARH 419
Query: 464 LI 465
LI
Sbjct: 420 LI 421
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAKEEPES 187
++ +L+PA KVG +IG+ GE IK++ E T + + I DGP P ++ + I+
Sbjct: 163 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 188 SLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSI 247
+ ++R K D A GG S ++ VP G +IG+ G +K I
Sbjct: 223 QAREMVLEIIR-EKDQADFRGVRGDFASRAGGG--SIEVSVPRFAVGIVIGRNGEMIKKI 279
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
Q + VR+ + P + +R +V+G A +I
Sbjct: 280 QNDAG--VRI---QFKPDDGISPERAAQVMGPPDRCQHAAHII 317
>gi|148665205|gb|EDK97621.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_b
[Mus musculus]
Length = 564
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 123/312 (39%), Gaps = 40/312 (12%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G IK I ++T++R+ I G E+ V I A E S
Sbjct: 207 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 264
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A +L + ++ D + +V K+L G LIGK+G +K I+
Sbjct: 265 -ACRMILEIMQKEAD---------ETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHE 314
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G A I LR+ FE
Sbjct: 315 TGTKITISSLQDLSIY--NPERTITVRGTIEACANAEIEIMKKLRE---------AFEND 363
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
M N Q + IP GL S + +PPP P +PP
Sbjct: 364 MLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPPAG------PRGVPPSPPYH 408
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
P S Y + H S Q T + IP A+IG GA I + R
Sbjct: 409 PFATHSGY-FSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARF 467
Query: 431 SGATVTIQETRG 442
+GA++ I G
Sbjct: 468 AGASIKIAPAEG 479
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMIS 180
+P + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 435 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIIT 490
>gi|296209450|ref|XP_002751548.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Callithrix jacchus]
Length = 579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 182/427 (42%), Gaps = 69/427 (16%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPG-----WPGESVFRMLVPAQKVGSIIGR 147
+P+++ + + LQ+ + GS+ + PG P + R+LVP Q VG+IIG+
Sbjct: 154 IPDEMAVQQTPLQQPRGRRGLGQRGSSRQGSPGSMSKQKPCDLPLRLLVPTQFVGAIIGK 213
Query: 148 KGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV-HKRIVD 205
+G I+ I ++T+++I + G E+++ I + E S+ A +L + HK D
Sbjct: 214 EGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSA---ACKSILEIMHKEAQD 270
Query: 206 GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV 265
++ ++ K+L + G LIGK+G +K I++ ++ + + ++L +
Sbjct: 271 IKFTE----------EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL 320
Query: 266 FALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRSIIPLFEMHMQMPNPQ 317
+ +R + V G+ KA E I +R+ + +IP ++ P
Sbjct: 321 Y--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPP 378
Query: 318 MDHIPPPQSWGPPQGLPP--------------------SGGPGYGHNPQYMPPPRQ---A 354
+PPP S GPP + P S G G Q++ + A
Sbjct: 379 TSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 355 ESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVHGSSNAQS--TPSMITQVTQQM 406
PA+ P + P A GR ++G ++ +P ++ +
Sbjct: 438 SIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IYGKIKEENFVSPKEEVKLEAHI 492
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEISGTASQVQTAQQL 464
++P A VIG G +++ ++ S A V + +T ++ V+I+G Q AQ+
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRK 552
Query: 465 IQNFMAE 471
IQ + +
Sbjct: 553 IQEILTQ 559
>gi|392339927|ref|XP_003753941.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|392347297|ref|XP_003749789.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|149033413|gb|EDL88214.1| insulin-like growth factor 2, binding protein 3 [Rattus norvegicus]
Length = 579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 165/388 (42%), Gaps = 64/388 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIAS 357
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--------------------S 336
+ +IP ++ P +PPP S GPP + P S
Sbjct: 358 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALS 416
Query: 337 GGPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVH 387
G G Q++ + A PA+ P + P A GR ++
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IY 471
Query: 388 GSSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGV 443
G ++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 472 GKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDE 531
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 532 NDQVVVKITGHFYACQVAQRKIQEILTQ 559
>gi|395830897|ref|XP_003788549.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Otolemur garnettii]
Length = 579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 165/388 (42%), Gaps = 64/388 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIAS 357
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--------------------S 336
+ +IP ++ P +PPP S GPP + P S
Sbjct: 358 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALS 416
Query: 337 GGPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVH 387
G G Q++ + A PA+ P + P A GR ++
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IY 471
Query: 388 GSSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGV 443
G ++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 472 GKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDE 531
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 532 NDQVVVKITGHFYACQVAQRKIQEILTQ 559
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 181/427 (42%), Gaps = 69/427 (16%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPG-----WPGESVFRMLVPAQKVGSIIGR 147
+P+++ + + LQ+ + GS+ + PG P + R+LVP Q VG+IIG+
Sbjct: 154 IPDEMAAQQNPLQQPRGRRGLGQRGSSRQGSPGSLSKQKPCDLPLRLLVPTQFVGAIIGK 213
Query: 148 KGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV-HKRIVD 205
+G I+ I ++T+++I + G E+++ I + E S+ A +L + HK D
Sbjct: 214 EGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSA---ACKSILEIMHKEAQD 270
Query: 206 GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV 265
++ ++ K+L + G LIGK+G +K I++ ++ + + ++L +
Sbjct: 271 IKFTE----------EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL 320
Query: 266 FALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRSIIPLFEMHMQMPNPQ 317
+ +R + V G KA E I +R+ V +IP ++ P
Sbjct: 321 Y--NPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNVQTHLIPGLNLNDLGLFPP 378
Query: 318 MDHIPPPQSWGPPQGLPP--------------------SGGPGYGHNPQYMPPPRQ---A 354
+PPP S GPP + P S G G Q++ + A
Sbjct: 379 TSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 355 ESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVHGSSNAQS--TPSMITQVTQQM 406
PA+ P + P A GR ++G ++ +P ++ +
Sbjct: 438 SIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IYGKIKEENFVSPKEEVKLEAHI 492
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEISGTASQVQTAQQL 464
++P A VIG G +++ ++ S A V + +T ++ V+I+G Q AQ+
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRK 552
Query: 465 IQNFMAE 471
IQ + +
Sbjct: 553 IQEILTQ 559
>gi|313245372|emb|CBY40123.1| unnamed protein product [Oikopleura dioica]
Length = 412
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 139/337 (41%), Gaps = 61/337 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKI--VEETRARIKILDGP-PGTTERAVMISAKEEPESS 188
+MLVPA VG+IIG+ G +++I ++++RAR+ + PG+ + A + A PE+
Sbjct: 40 LKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIYGA---PEAC 96
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A+ L V K D ++ K+L + G LIG+ G +K +Q
Sbjct: 97 GAAAIRILEIVRKEEKD--------------NELPLKVLAHNALIGRLIGRDGRNLKHVQ 142
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + + + +L + + DR + + G+ G+ +A + I LR+F D + +
Sbjct: 143 DKTGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLRQFETDMAAMSQQS 200
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
++ + + QM P QS P A PP
Sbjct: 201 LYPGLNSQQMQMFPGLQS--------------------------------PTA---PPAY 225
Query: 369 KQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
+QG S + + +V S N+ S TQ T + IP A+IG+ G I I
Sbjct: 226 NVSYQG-SYFFKNVSQSVFFSGNSSSNN---TQETVTLLIPSGAVGAIIGSRGTHIRNIS 281
Query: 429 RSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
R +GA++ I + V I G AQ I
Sbjct: 282 RIAGASIRIHVNADRDAKARVTIVGVPESQWKAQFCI 318
>gi|73976012|ref|XP_539474.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Canis lupus familiaris]
Length = 579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 165/388 (42%), Gaps = 64/388 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIAS 357
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--------------------S 336
+ +IP ++ P +PPP S GPP + P S
Sbjct: 358 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALS 416
Query: 337 GGPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVH 387
G G Q++ + A PA+ P + P A GR ++
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IY 471
Query: 388 GSSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGV 443
G ++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 472 GKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDE 531
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 532 NDQVVVKITGHFYACQVAQRKIQEILTQ 559
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 165/388 (42%), Gaps = 64/388 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIAS 357
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--------------------S 336
+ +IP ++ P +PPP S GPP + P S
Sbjct: 358 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALS 416
Query: 337 GGPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVH 387
G G Q++ + A PA+ P + P A GR ++
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IY 471
Query: 388 GSSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGV 443
G ++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 472 GKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDE 531
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 532 NDQVVVKITGHFYACQVAQRKIQEILTQ 559
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 126/322 (39%), Gaps = 67/322 (20%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTER 175
GS++ + +P R+LVP Q VG+IIG++G IK I ++T++R+ I G E+
Sbjct: 183 GSSQARQIDFP----LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEK 238
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
V I A E S A +L + ++ D + ++ K+L G
Sbjct: 239 PVTIHATPEGTSE---ACRMILEIMQKEAD---------ETKLAEEIPLKILAHNGLVGR 286
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGK+G +K I+ + + + +DL ++ +R + V G A I LR
Sbjct: 287 LIGKEGRNLKKIEHETGTKITISSLQDLSIY--NPERTITVKGTVEACANAEIEIMKKLR 344
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAE 355
+ FE M N Q + IP GL S + +PPP
Sbjct: 345 E---------AFENDMLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPPS--- 383
Query: 356 SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADA 415
P PP P AY + VN+ IP A
Sbjct: 384 ---GPRGAPPAAPYHPF----AYPEQEIVNLF--------------------IPTQAVGA 416
Query: 416 VIGTAGASISYIRRSSGATVTI 437
+IG GA I + R +GA++ I
Sbjct: 417 IIGKKGAHIKQLARFAGASIKI 438
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 125 GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKE 183
+P + + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 398 AYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG-- 455
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PP + + RI L ++ P K+ + VP+S AG +IGK G T
Sbjct: 456 ------PP--EAQFKAQGRIFGKLKEENFFNPKEEV-KLEAHIRVPSSTAGRVIGKGGKT 506
Query: 244 VKSIQEASNCIVRV 257
V +Q ++ V V
Sbjct: 507 VNELQNLTSAEVIV 520
>gi|367050644|ref|XP_003655701.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
gi|347002965|gb|AEO69365.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
Length = 374
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 151/368 (41%), Gaps = 84/368 (22%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + EET + + G +R + I+ E S
Sbjct: 51 TLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTITGGCEAISRAY 110
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
A V + +++G AP+ G GG + KLL+ +Q G++IG+QG
Sbjct: 111 AA------VARSLLEG-------APTMGMGGVIQNNGTHPIKLLISHNQMGTIIGRQGLK 157
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
+K IQ+ S VR++ +++ +R+VEV G G+ +A+ + K LVD
Sbjct: 158 IKHIQDVSG--VRMVAQKEM--LPQSTERIVEVQGTPEGIQRAVW----EICKCLVD--- 206
Query: 304 IPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGY---------------GHNPQYM 348
+ + + Q G P G+ SGG GY G+ +
Sbjct: 207 ----DWQRGTGTVLYNPVVRTQGVGAP-GI--SGGSGYVQDRAPYGGSRVTRTGNGADFS 259
Query: 349 ---PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQ 405
P S P++ PP + + I TQ
Sbjct: 260 NGGPRSYNRRSDSDPSNRGPPTHDENGEEIQ--------------------------TQN 293
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQL 464
+ IP +IG AG+ IS IR++SGA ++I + GE I GT+ +TA L
Sbjct: 294 ISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTSKANETALFL 353
Query: 465 I-QNFMAE 471
+ +N AE
Sbjct: 354 LYENLEAE 361
>gi|410952454|ref|XP_003982895.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Felis catus]
Length = 579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 165/388 (42%), Gaps = 64/388 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIAS 357
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--------------------S 336
+ +IP ++ P +PPP S GPP + P S
Sbjct: 358 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALS 416
Query: 337 GGPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVH 387
G G Q++ + A PA+ P + P A GR ++
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IY 471
Query: 388 GSSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGV 443
G ++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 472 GKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDE 531
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 532 NDQVVVKITGHFYACQVAQRKIQEILTQ 559
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 182/428 (42%), Gaps = 70/428 (16%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPG-----WPGESVFRMLVPAQKVGSIIGR 147
+P+++ + + LQ+ + GS+ + PG P + R+LVP Q VG+IIG+
Sbjct: 212 IPDEMAAQQNPLQQPRGRRGFGHRGSSRQGSPGSASKQKPCDLPLRLLVPTQFVGAIIGK 271
Query: 148 KGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV-HKRIVD 205
+G I+ I ++T+++I + G E+++ I + E S+ A +L + HK D
Sbjct: 272 EGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSA---ACKSILEIMHKEAQD 328
Query: 206 GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV 265
++ ++ K+L + G LIGK+G +K I++ ++ + + ++L +
Sbjct: 329 IKFTE----------EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL 378
Query: 266 FALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRSIIPLFEMHMQMPNPQ 317
+ +R + + G+ KA E I +R+ + +IP ++ P
Sbjct: 379 Y--NPERTITIKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPP 436
Query: 318 MDHIPPPQSWGPPQGLPP---------------------SGGPGYGHNPQYMPPPRQ--- 353
+PPP S GPP + P S G G Q++ +
Sbjct: 437 TSGMPPPTS-GPPSAMTPPYPQFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 495
Query: 354 AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVHGSSNAQS--TPSMITQVTQQ 405
A PA+ P + P A GR ++G ++ +P ++
Sbjct: 496 ASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IYGKIKEENFVSPKEEVKLEAH 550
Query: 406 MQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEISGTASQVQTAQQ 463
+++P A VIG G +++ ++ S A V + +T ++ V+I+G Q AQ+
Sbjct: 551 IRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQR 610
Query: 464 LIQNFMAE 471
IQ + +
Sbjct: 611 KIQEILTQ 618
>gi|302508471|ref|XP_003016196.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
gi|291179765|gb|EFE35551.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
Length = 531
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 149/369 (40%), Gaps = 72/369 (19%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFI-------------KKIVEETRARIKILDGPPGTTERAV 177
R +V +++ G IIG+ G+ + K+V+ R+ + GP T +A
Sbjct: 213 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAY 272
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLI 237
I AK E + M G+++ G S +LL+ +Q G++I
Sbjct: 273 SIVAKSLLEGAPQMGMGGVVQ-------------------NNGTHSVRLLISHNQMGTII 313
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKF 297
G+QG +K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K
Sbjct: 314 GRQGLKIKYIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAIWEIG----KC 365
Query: 298 LVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY 357
L+D Q + + P ++ S G NP Y R
Sbjct: 366 LID---------DWQRGTGTVLYNPAVRASVGSGSGQGS---VTGTNPSYGGSSRSYNRT 413
Query: 358 YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQ-----IPLSY 412
AD P S+Y R + N ++T+ +++Q IP
Sbjct: 414 GNGADF----SDHP----SSYSRRG-----NNDNPNRGIPLVTEDGEEVQTQNISIPSDM 460
Query: 413 ADAVIGTAGASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMA 470
+IG G IS IRRSSGA ++I + GE I G+A + A L+ +N A
Sbjct: 461 VGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENLEA 520
Query: 471 EAAAPSQAQ 479
E SQ Q
Sbjct: 521 EKMRRSQQQ 529
>gi|301771918|ref|XP_002921377.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ailuropoda melanoleuca]
Length = 579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 165/388 (42%), Gaps = 64/388 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIAS 357
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--------------------S 336
+ +IP ++ P +PPP S GPP + P S
Sbjct: 358 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALS 416
Query: 337 GGPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVH 387
G G Q++ + A PA+ P + P A GR ++
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IY 471
Query: 388 GSSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGV 443
G ++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 472 GKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDE 531
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 532 NDQVVVKITGHFYACQVAQRKIQEILTQ 559
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTT 173
G T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTT
Sbjct: 50 GCTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 109
Query: 174 ERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS--DSSHAPSGTG----------GK 221
ER +I E A++G VH I + + S+ P +
Sbjct: 110 ERVCLIQGTVE-------ALNG---VHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDR 159
Query: 222 VS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDA 280
V K++VP S AG +IGK G TVK++ E S V++ P +RVV + G+
Sbjct: 160 VKQAKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEP 216
Query: 281 SGVHKAMELI 290
KA+E+I
Sbjct: 217 EQNRKAVEII 226
>gi|395738667|ref|XP_003780758.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Pongo abelii]
Length = 567
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 182/427 (42%), Gaps = 69/427 (16%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPG-----WPGESVFRMLVPAQKVGSIIGR 147
+P+++ + + LQ+ + GS+ + PG P + R+LVP Q VG+IIG+
Sbjct: 142 IPDEMAAQQNPLQQPRGRRGLGQRGSSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGK 201
Query: 148 KGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV-HKRIVD 205
+G I+ I ++T+++I + G E+++ I + E S+ A +L + HK D
Sbjct: 202 EGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSA---ACKSILEIMHKEAQD 258
Query: 206 GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV 265
++ ++ K+L + G LIGK+G +K I++ ++ + + ++L +
Sbjct: 259 IKFTE----------EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL 308
Query: 266 FALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRSIIPLFEMHMQMPNPQ 317
+ +R + V G+ KA E I +R+ + +IP ++ P
Sbjct: 309 Y--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPP 366
Query: 318 MDHIPPPQSWGPPQGLPP--------------------SGGPGYGHNPQYMPPPRQ---A 354
+PPP S GPP + P S G G Q++ + A
Sbjct: 367 TSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 425
Query: 355 ESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVHGSSNAQS--TPSMITQVTQQM 406
PA+ P + P A GR ++G ++ +P ++ +
Sbjct: 426 SIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IYGKIKEENFVSPKEEVKLEAHI 480
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEISGTASQVQTAQQL 464
++P A VIG G +++ ++ S A V + +T ++ V+I+G Q AQ+
Sbjct: 481 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRK 540
Query: 465 IQNFMAE 471
IQ + +
Sbjct: 541 IQEILTQ 547
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 129/304 (42%), Gaps = 62/304 (20%)
Query: 138 AQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGL 196
++ VG+IIGR+G I+ I +++RAR+ + G+ E+++ I PE+
Sbjct: 84 SEMVGAIIGRQGTTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTNAC---- 137
Query: 197 LRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVR 256
KRI++ + + A S G++ K+L + G +IGK G T+K I + ++ +
Sbjct: 138 ----KRILEVMQQE---ALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 190
Query: 257 VLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNP 316
V D+ F L +R++ V G + +A I + LR+ +E +Q P
Sbjct: 191 VSSINDINSFNL--ERIITVKGLIENMSRAENQISTKLRQS---------YENDLQAMAP 239
Query: 317 QMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY---YPPADLPPPMEKQPHQ 373
Q P P + + G G N MP P +S+ PA + PP
Sbjct: 240 QSLMFPGLH----PMAMMSTPGNGMVFNTS-MPFP-SCQSFAMSKTPASVVPP------- 286
Query: 374 GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGA 433
A+ + Q T + IP + A+IGT G+ I I R S A
Sbjct: 287 ---AFPNDM------------------QETTFLYIPNNAVGAIIGTKGSHIRSIMRFSSA 325
Query: 434 TVTI 437
++ I
Sbjct: 326 SLKI 329
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 124 PGWPG---ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPP---GTTER 175
P +P E+ F + +P VG+IIG KG I+ I+ + A +KI LD TER
Sbjct: 286 PAFPNDMQETTF-LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTER 344
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG-KVSTKLLVPASQAG 234
V I E G + I + + + GT +++ +LLV +SQ G
Sbjct: 345 KVTIVGTPE----------GQWKAQYMIFEKMREEGFMC--GTDDVRLTVELLVASSQVG 392
Query: 235 SLIGKQGGTVKSIQEASNCIVRV 257
+IGK G V+ +Q + ++++
Sbjct: 393 RIIGKGGQNVRELQRVTGSVIKL 415
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 41/251 (16%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTTERAVMISAKEEPE 186
S ++ +P +VG IIG+ GE IK + ++ A+I++ +D P + R V ++ +
Sbjct: 112 SSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAI 171
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
++ + +L + +GL + +G GG + +P ++ G +IGK G T+KS
Sbjct: 172 ATAEKLIKEVLAEAESGGNGLVTRRM---TGQGGADEFSMKIPNNKVGLIIGKGGETIKS 228
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
+Q + ++V+ LP +R +++ G + + A +L+ S +
Sbjct: 229 MQATTGARIQVI-PLHLPPGDTSTERTLKIEGTSEQIESAKQLVDS-------------I 274
Query: 307 FEMHMQMPNPQMD--------HIPPPQSWGPPQGLPPSGGPGYGH---------NPQYMP 349
++ NP M PP SW PP S PGYG+ PQY
Sbjct: 275 LSGENRLRNPSMSGGYSQQGYQARPPSSWAPPAA---SQQPGYGYAQPGAYPGPTPQYN- 330
Query: 350 PPRQAESYYPP 360
P+QA + YPP
Sbjct: 331 VPQQAYAGYPP 341
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPPG--T 172
G ++ G G F M +P KVG IIG+ GE IK + T ARI++ L PPG +
Sbjct: 191 GLVTRRMTGQGGADEFSMKIPNNKVGLIIGKGGETIKSMQATTGARIQVIPLHLPPGDTS 250
Query: 173 TERAVMISAKEEPESSLPPAMDGLLRVHKRIVD 205
TER + I E S +D +L R+ +
Sbjct: 251 TERTLKIEGTSEQIESAKQLVDSILSGENRLRN 283
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGE-----MTVEISGTASQ 457
+++++IP +IG G +I Y++ SGA IQ TR + + VE++GT+
Sbjct: 113 SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAK--IQVTRDMDADPNSPNRLVELTGTSDA 170
Query: 458 VQTAQQLIQNFMAEA 472
+ TA++LI+ +AEA
Sbjct: 171 IATAEKLIKEVLAEA 185
>gi|221502133|gb|EEE27877.1| microneme protein, putative [Toxoplasma gondii VEG]
Length = 2161
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
Query: 12 DGNHDLEQIPENQEVENQVP-GYEVPEYEVPEVPQEQVPQEQVPESQVTKEQVTE-DQLT 69
+G H E++PE + + + P G +PE E+PE E VP+E++PE + E+ E + +
Sbjct: 1919 EGEHIPEELPEGEHIPEEFPEGEHIPE-ELPE--GEHVPEEEIPEGEHIPEEFPEGEHVP 1975
Query: 70 EDQVPE-DHVPEDQVPE-DHVPEDQVPE-DIVPED 101
E+++PE +H+PE++ PE +HVPE+++PE + VPE+
Sbjct: 1976 EEEIPEGEHIPEEEFPEGEHVPEEEIPEGEHVPEE 2010
Score = 62.0 bits (149), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 72/126 (57%), Gaps = 29/126 (23%)
Query: 12 DGNHDLEQIPENQEVENQVP-GYEVPEYEVPE---VPQE-----QVPQEQVPESQ-VTKE 61
+G H E+ PE + + ++P G VPE E+PE +P+E VP+E++PE + + +E
Sbjct: 1929 EGEHIPEEFPEGEHIPEELPEGEHVPEEEIPEGEHIPEEFPEGEHVPEEEIPEGEHIPEE 1988
Query: 62 QVTE-DQLTEDQVPE-DHVPEDQVP------------EDHVPED-----QVPEDIVPEDS 102
+ E + + E+++PE +HVPE+++P +HVPE+ VPE+ +PE
Sbjct: 1989 EFPEGEHVPEEEIPEGEHVPEEELPGGELIPEEEIPEGEHVPEELPEGEHVPEEEIPEGE 2048
Query: 103 QLQEKQ 108
+ E++
Sbjct: 2049 HVPEEE 2054
Score = 62.0 bits (149), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 25/109 (22%)
Query: 12 DGNHDLEQIPENQEV-ENQVP-GYEVPEYEVPE---VPQEQVPQ-EQVPESQ-------- 57
+G H E+ PE + V E ++P G +PE E PE VP+E++P+ E VPE +
Sbjct: 1960 EGEHIPEEFPEGEHVPEEEIPEGEHIPEEEFPEGEHVPEEEIPEGEHVPEEELPGGELIP 2019
Query: 58 ---------VTKEQVTEDQLTEDQVPE-DHVPEDQVPE-DHVPEDQVPE 95
V +E + + E+++PE +HVPE+++PE +HVPE+++PE
Sbjct: 2020 EEEIPEGEHVPEELPEGEHVPEEEIPEGEHVPEEEIPEGEHVPEEEIPE 2068
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 26/117 (22%)
Query: 18 EQIPENQEVENQVP-GYEVPEYEVPE---VPQEQVPQ-----EQVPESQVTKEQVTEDQL 68
E+IPE + V + P G VPE E+PE VP+E++P+ E+ PE + E++ E +
Sbjct: 1873 EEIPEGEHVPEEFPEGEHVPEEEIPEGEHVPEEEIPEGEHVPEEFPEGEHIPEELPEGEH 1932
Query: 69 TEDQVPE-DHVPED-----QVPEDHVPE-----------DQVPEDIVPEDSQLQEKQ 108
++ PE +H+PE+ VPE+ +PE + VPE+ +PE + E++
Sbjct: 1933 IPEEFPEGEHIPEELPEGEHVPEEEIPEGEHIPEEFPEGEHVPEEEIPEGEHIPEEE 1989
Score = 52.4 bits (124), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 8/70 (11%)
Query: 47 QVPQEQVPESQVTKEQVTE-DQLTEDQVPE-DHVPEDQVPE-DHVPE-----DQVPEDIV 98
VP+E++PE + E++ E + + E+++PE +HVPE+++PE +HVPE + VPE+ +
Sbjct: 1837 HVPEEEIPEGEHIPEELPEGEHVPEEEIPEGEHVPEEEIPEGEHVPEEFPEGEHVPEEEI 1896
Query: 99 PEDSQLQEKQ 108
PE + E++
Sbjct: 1897 PEGEHVPEEE 1906
>gi|302768295|ref|XP_002967567.1| hypothetical protein SELMODRAFT_88821 [Selaginella moellendorffii]
gi|300164305|gb|EFJ30914.1| hypothetical protein SELMODRAFT_88821 [Selaginella moellendorffii]
Length = 272
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 139/338 (41%), Gaps = 89/338 (26%)
Query: 133 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESSL 189
R LV + GS+IG+ G I + ++ ARI++ D PGTT+R V++S + +
Sbjct: 1 RFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSG---AINDV 57
Query: 190 PPAMDGLL-RVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A++ +L ++ K D DS + P+ +L+VP S G++IGK GGT+KS
Sbjct: 58 LTALNLILSKIQKETED--DSQTDSKPN------QLRLVVPNSVCGAIIGKGGGTIKSFI 109
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
E S +++ G + DR+V + G KA+ELI L K L D S
Sbjct: 110 EDSEASIKLSG-----ILQGISDRLVTITGSIEQQLKAVELI---LTKLLGDSS------ 155
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
+D+ P S+ + P YP L P +E
Sbjct: 156 --------YLDYAAAPLSYTV-----------ICFKLFRLAP-------YPV--LLPVLE 187
Query: 369 KQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
P + T +T + +P + A++G G ++ I+
Sbjct: 188 SCP--------------------------VTTSIT--LAVPDEHIGAIVGRGGKTLGEIQ 219
Query: 429 RSSGATVTIQE----TRGVPGEMTVEISGTASQVQTAQ 462
++SG T+ I E G V + GTA +Q AQ
Sbjct: 220 QASGVTIKISERGDFVSGTKNSRKVTLVGTAEGLQIAQ 257
>gi|426227471|ref|XP_004007841.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Ovis aries]
Length = 580
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 165/389 (42%), Gaps = 65/389 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIAS 357
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--------------------- 335
+ +IP ++ P +PPP S GPP + P
Sbjct: 358 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAMTPPYPQFEQQSETETVHLFIPAL 416
Query: 336 SGGPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNV 386
S G G Q++ + A PA+ P + P A GR +
Sbjct: 417 SVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----I 471
Query: 387 HGSSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRG 442
+G ++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 472 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPD 531
Query: 443 VPGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 532 ENDQVVVKITGHFYACQVAQRKIQEILTQ 560
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEE 184
G+ + ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER V+I+ E
Sbjct: 64 GQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSE- 122
Query: 185 PESSLPPAMDGLLRVHKRIVDGLD--------SDSSHAPSGTGGKVSTKLLVPASQAGSL 236
D L VHK +++ + S S + K K++VP S AG +
Sbjct: 123 ---------DSLKSVHKFLMEKISQAPQPPAKSPSEQNANNNRAK-QVKIVVPNSTAGLI 172
Query: 237 IGKQGGTVKSIQEASNCIVRV----LGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
IGK G T+K I E + V++ +LP +RV+ + G+ KA I
Sbjct: 173 IGKGGATIKFIMEQTGSRVQISQKATNGINLP------ERVITITGEPEQNDKACAFI 224
>gi|73976022|ref|XP_863341.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 7 [Canis lupus familiaris]
Length = 580
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 165/389 (42%), Gaps = 65/389 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIAS 357
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--------------------- 335
+ +IP ++ P +PPP S GPP + P
Sbjct: 358 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAMTPPYPQFEQAPQTETVHLFIPAL 416
Query: 336 SGGPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNV 386
S G G Q++ + A PA+ P + P A GR +
Sbjct: 417 SVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----I 471
Query: 387 HGSSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRG 442
+G ++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 472 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPD 531
Query: 443 VPGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 532 ENDQVVVKITGHFYACQVAQRKIQEILTQ 560
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 64/348 (18%)
Query: 102 SQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRA 161
S+ Q+ Q ++GS +K+ P +P RMLVP Q VG+IIG++G IK I ++T++
Sbjct: 21 SREQDSQPGTSGSSLGSRQKQ-PDFP----LRMLVPTQFVGAIIGKEGLTIKNITKQTQS 75
Query: 162 RIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGG 220
++ I G E+ + I + E S+ A ++ + ++ + +D+ +
Sbjct: 76 KVDIHRKENAGAAEKPITIHSTPEGCST---ACHMIMDIMQK--EAVDTKVTE------- 123
Query: 221 KVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDA 280
+ K+L S G LIGK+G +K I+E + + + +DL ++ +R + V G
Sbjct: 124 DIPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDLTIY--NPERTIIVKGSI 181
Query: 281 SGVHKAMELIGSHLRKFLVD--------RSIIPLFEMH-MQMPNPQMDHIPPPQSWGPPQ 331
+A I LR+ + ++IP + + + + + +PP P+
Sbjct: 182 EACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAG---PR 238
Query: 332 GLPPSGGPGYGHNPQYMPPPRQAESYY--PPADLPPPMEKQPHQGISAYGREAPVNVHGS 389
G+PP P G+NP ++ Q Y PPA GIS +AP
Sbjct: 239 GIPPV--PPTGYNP-FLGHSSQLGGLYGVPPAS-----------GISHQHTQAP------ 278
Query: 390 SNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI 437
Q + IP A+IG G I + R +GA++ I
Sbjct: 279 ----------EQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI 316
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEEP 185
P + V + +P Q VG+IIG+KG+ IK++ A IKI P T+R V+I+
Sbjct: 278 PEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITG---- 333
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
PP + + RI L ++ + K+ T + VP+S AG +IGK G TV
Sbjct: 334 ----PP--EAQFKAQGRIFGKLKEENFFT-AKEEVKLETHIKVPSSAAGRVIGKGGKTVN 386
Query: 246 SIQEASNCIVRV 257
+Q ++ V V
Sbjct: 387 ELQNLTSAEVIV 398
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 158/379 (41%), Gaps = 57/379 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G I+ I ++T+++I + G E+A+ I + E
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPE------ 251
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
G K I++ + ++ + T +V K+L + G LIGK+G +K +++
Sbjct: 252 ----GCSAACKMILEIMQKEAKD--TKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQD 305
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G +A + I +R+ + + H
Sbjct: 306 TETKITISSLQDLTLY--NPERTITVKGSIENCCRAEQEIMKKVREAYENDVAAMSLQSH 363
Query: 311 MQMPNPQMDHI---PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
+ +P + + P + PP PPS G ++PP ++ + PA +
Sbjct: 364 L-IPGLNLAAVGLFPASSNAVPP---PPSSVSGAAPYSSFLPPEQETVHVFIPAQAVGAI 419
Query: 368 EKQPHQGISAYGR--EAPVNVHGSSNAQSTPSMI-------------------------- 399
+ Q I R A + + + S M+
Sbjct: 420 IGKKGQHIKQLSRFASASIKIAPAETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFF 479
Query: 400 -----TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEIS 452
++ +++P S A VIG G +++ ++ + A V + +T ++ V+I
Sbjct: 480 GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKII 539
Query: 453 GTASQVQTAQQLIQNFMAE 471
G Q AQ+ I++ +A+
Sbjct: 540 GHFYASQMAQRKIRDILAQ 558
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEEP 185
P + + +PAQ VG+IIG+KG+ IK++ A IKI P + R V+I+
Sbjct: 402 PEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPAETPDSKVRMVIITG---- 457
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
PP + + RI L ++ P K+ T + VPAS AG +IGK G TV
Sbjct: 458 ----PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLETHIRVPASAAGRVIGKGGKTVN 510
Query: 246 SIQEAS 251
+Q +
Sbjct: 511 ELQNLT 516
>gi|148232337|ref|NP_001090834.1| far upstream element (FUSE) binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|134023819|gb|AAI35377.1| fubp3 protein [Xenopus (Silurana) tropicalis]
Length = 546
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 167/411 (40%), Gaps = 60/411 (14%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 85 VPDKMVGFIIGRGGEQISRIQTESGCKIQIAPDSGGMPERPCVLTGT-------PESIEQ 137
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + G ++L+PAS+ G +IGK G T+K +QE + V
Sbjct: 138 AKRLLGQIVDRCRNGPGFHNDMDGNSTVQEILIPASKVGLVIGKGGETIKQLQERTG--V 195
Query: 256 RVLGAEDLPV--------------FALQD--DRVVEVV-----GDASGVHKAME-LIGSH 293
+++ +D P+ F +Q D V+E++ D G+ IG
Sbjct: 196 KMIMIQDGPLPTGADKPLRITGDPFKVQQARDLVLEIIREKDQADFRGIRSDFSSRIGGG 255
Query: 294 LRKFLVDRSIIPLF-----EMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYM 348
+ V R + + EM ++ N I + P G+ P Q M
Sbjct: 256 SVEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQVM 305
Query: 349 PPPRQAE-SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQ 407
P + + + +L +++ G A R G N STP + ++T
Sbjct: 306 GLPDLCQHAAHIINELILTAQERDGFGALALAR-GRGRSRGDWNL-STPGSMQEIT--YT 361
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQL 464
+P VIG G +I I + SGA V +Q PG I G Q++ A+ L
Sbjct: 362 VPADKCGLVIGKGGENIKNINQQSGAHVELQRNPPPNTDPGVRIFTIRGVPQQIELARHL 421
Query: 465 IQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNPGHAGHAGGYGSVY 515
I + P+ +G + G + ++ + +P N A G+GS Y
Sbjct: 422 IDE---KVGGPT---IGGPSSFGQSAFSQAHATPHQNGPQAFVTQGWGSTY 466
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 13/125 (10%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAKEEPES 187
+V +L+PA KVG +IG+ GE IK++ E T + I I DGP P ++ + I+ +P
Sbjct: 164 TVQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITG--DP-F 220
Query: 188 SLPPAMDGLLRVHKRI----VDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
+ A D +L + + G+ SD S G +VS VP G +IG+ G
Sbjct: 221 KVQQARDLVLEIIREKDQADFRGIRSDFSSRIGGGSVEVS----VPRFAVGIIIGRNGEM 276
Query: 244 VKSIQ 248
+K IQ
Sbjct: 277 IKKIQ 281
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 152/356 (42%), Gaps = 66/356 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKI--VEETRARIKILDGPPGTTERAVMISAKEEPESSL 189
R+L+ ++VGSIIG+ K + ++ ARI I +G ER V I+
Sbjct: 16 IRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEG--NCPERIVTITGPT------ 67
Query: 190 PPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVK 245
D + + I + D +++ S + V+ +L+VPASQ GSLIGK G +K
Sbjct: 68 ----DAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIP 305
I+E++ V+V G + LP +R V + G + + ++ I
Sbjct: 124 EIRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQI--------------- 164
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPP---SGGPGYGHNPQY-MPPPRQAESYYPPA 361
+ ++ P P+ IP + P P +GG Y QY +P P Q + A
Sbjct: 165 -CVVMLESP-PKGATIP----YRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLA 218
Query: 362 DLPPPMEKQPH----QGISAY-GREAPVNVHGSSNAQSTPSMITQV-------TQQMQIP 409
M++ P Q A+ G + P +H S AQ+ + + T ++ IP
Sbjct: 219 -----MQQTPFTPLGQTTPAFPGEKLP--LHSSEEAQNLMGQSSGLDASPPASTHELTIP 271
Query: 410 LSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLI 465
+IG G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 272 NDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLI 327
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 261 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 314
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 72/349 (20%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
R LV G IIG+ G I ++ ARI++ + PGT +R +M+S
Sbjct: 42 LRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLF---GE 98
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ AM+ +L K + +G + + + A + +L+VP S G +IGK G T+KS
Sbjct: 99 VMKAMELIL--EKLLAEGEEFNEAEA------RPKVRLVVPNSSCGGIIGKGGATIKSFI 150
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
E S+ +++ +D L DR+V V G A++LI L+K D +
Sbjct: 151 EESHAGIKI-SPQDNNYVGLH-DRLVTVTGTFDNQMNAIDLI---LKKLSEDVH----YP 201
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
++ P P + P G P G YM P
Sbjct: 202 ANLSSPFPYAG-LTFPSYPGVPVG--------------YMIP------------------ 228
Query: 369 KQPHQGISAYGREAPVNVHGSSNAQSTPS--MITQVTQQMQ--IPLSYAD----AVIGTA 420
+ P+ YG P N +G + PS M + + + Q + + AD AV+G A
Sbjct: 229 QVPYNNAVNYG---PNNGYGGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRA 285
Query: 421 GASISYIRRSSGATVTIQETRG--VPG--EMTVEISGTASQVQTAQQLI 465
G +I+ I ++SGA + I + RG + G + V I+GT+ ++TA+ +I
Sbjct: 286 GRNITEIIQASGARIKISD-RGDFISGTSDRKVTITGTSEAIRTAESMI 333
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 148/348 (42%), Gaps = 62/348 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESS 188
R LV G IIG+ G I ++ ARI++ + PGT +R +M+S +
Sbjct: 51 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFD---E 107
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
+ AM+ L + K + +G +S+ + A + +L+VP S G +IGK G T+KS
Sbjct: 108 VVKAME--LVLEKLLSEGEESNEAEA------RPKFRLVVPNSSCGGIIGKGGATIKSFI 159
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
E S+ +++ +D L DR+V + G + +A+ LI S L + +
Sbjct: 160 EDSHAGIKI-SPQDNNFVGLH-DRLVTITGPLNSQMRAIHLILSKLSE-----------D 206
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQ-----YM--PPPRQAESYYPPA 361
+H PP P P G G+ P YM P P Y P
Sbjct: 207 VHY-----------PPNLSSP----FPYAGLGFPSYPAAVPVGYMIPPVPYNNTVNYGPN 251
Query: 362 DLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAG 421
P PV +++AQ + + + + AV+G AG
Sbjct: 252 GYAAPGGGGGGGRYQNNKPGTPVRSPANNDAQE--------SHTIGVADEHIGAVVGRAG 303
Query: 422 ASISYIRRSSGATVTIQETRG--VPG--EMTVEISGTASQVQTAQQLI 465
+I+ I ++SGA + I + RG + G + V I+G++ +Q A+ +I
Sbjct: 304 RNITEIIQASGARIKISD-RGDFIAGTSDRKVTITGSSEAIQAAEAMI 350
>gi|410952456|ref|XP_003982896.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Felis catus]
Length = 580
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 165/389 (42%), Gaps = 65/389 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIAS 357
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--------------------- 335
+ +IP ++ P +PPP S GPP + P
Sbjct: 358 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAMTPPYPQFEQAPETETVHLFIPAL 416
Query: 336 SGGPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNV 386
S G G Q++ + A PA+ P + P A GR +
Sbjct: 417 SVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----I 471
Query: 387 HGSSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRG 442
+G ++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 472 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPD 531
Query: 443 VPGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 532 ENDQVVVKITGHFYACQVAQRKIQEILTQ 560
>gi|302692864|ref|XP_003036111.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
gi|300109807|gb|EFJ01209.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
Length = 282
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIGR G + +I E++ AR+ + + PG ER + +S
Sbjct: 4 MRCLIVTQDASIIIGRAGAHVNEIREKSGARVVVSESIPGNPERILNVSGP--------- 54
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G +K IQ+A
Sbjct: 55 -LDAVSKAFGLIVRRINDEPFDVPSLPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDA 113
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S R+ +E + +RV+ V G A +H A +G+ L
Sbjct: 114 SGA--RLNASEGM--LPGSTERVLSVAGVADAIHIATYYVGNIL 153
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG--EMTVEISGTASQVQ 459
VT + IP S +VIG G+ I I+ +SGA + E +PG E + ++G A +
Sbjct: 85 VTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLNASEGM-LPGSTERVLSVAGVADAIH 143
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A + N + EA Q +M ++A+ Y P G+P P
Sbjct: 144 IATYYVGNILIEA----QERMPSTANASYRP-----GNPTRRP 177
>gi|300796214|ref|NP_001179217.1| insulin-like growth factor 2 mRNA-binding protein 3 [Bos taurus]
gi|296488613|tpg|DAA30726.1| TPA: insulin-like growth factor 2 mRNA binding protein 3 [Bos
taurus]
Length = 580
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 165/389 (42%), Gaps = 65/389 (16%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-------- 296
K I++ ++ + + ++L ++ +R + V G+ KA E I +R+
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIAS 357
Query: 297 FLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPP--------------------- 335
+ +IP ++ P +PPP S GPP + P
Sbjct: 358 MNLQAHLIPGLNLNALGLFPPTSGMPPPTS-GPPSAITPPYPQFEQQSETETVHLFIPAL 416
Query: 336 SGGPGYGHNPQYMPPPRQ---AESYYPPADLPPPMEKQ------PHQGISAYGREAPVNV 386
S G G Q++ + A PA+ P + P A GR +
Sbjct: 417 SVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----I 471
Query: 387 HGSSNAQS--TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRG 442
+G ++ +P ++ +++P A VIG G +++ ++ S A V + +T
Sbjct: 472 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPD 531
Query: 443 VPGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I+G Q AQ+ IQ + +
Sbjct: 532 ENDQVVVKITGHFYACQVAQRKIQEILTQ 560
>gi|359319788|ref|XP_003639165.1| PREDICTED: far upstream element-binding protein 1-like [Canis lupus
familiaris]
Length = 663
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 155
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 156 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 214
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 215 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 255
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 182 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 241
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 242 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 297
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 298 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 343
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 281 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 340
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 341 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 400
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 401 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 442
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 378 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 416
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 140/353 (39%), Gaps = 40/353 (11%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
FRM P ++ +IG++G+ I + E+ ARI++ + ER +++ P ++
Sbjct: 204 FRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIILVKG---PAENVAK 260
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
A + R L+ S + + K+L+P G +IGK G + I+E
Sbjct: 261 AFGLITRAI------LEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEE-- 312
Query: 252 NCIVRVLGAED-LPVFALQDDRVVEVVGDASGVHKAMELIGSHL---RKFLVDRSIIPLF 307
N ++ AE LP DRV+ V+G +H A+ I + + L I+
Sbjct: 313 NSAAKLKAAEQPLPN---STDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKHKIVYYT 369
Query: 308 EMHMQMPNPQMDHIPPPQSWGPPQGL---PPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
+ Q+ N M I P ++G + P GG + HN Q P +P
Sbjct: 370 PGNNQLMNNTMGLI-PNNTYGNTGIIGNDPIQGGAPFQHNYQRQFQPSAPSHNQITTPVP 428
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
+ H V V + + ++ + + + +VIG G +I
Sbjct: 429 TQLYTDEHGNTMIGDVITSVPVPAGTGTD-------KFSEDVFVANTNIGSVIGKGGNNI 481
Query: 425 SYIRRSSGA-----------TVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
IR SSG T+ + RG+ + ++G+ + +QTA LI
Sbjct: 482 KQIRESSGCSYVKIEPDQHQTIMLGRGRGLTSIRKLTLTGSINLIQTAIYLIN 534
>gi|332222252|ref|XP_003260281.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Nomascus leucogenys]
Length = 645
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ P ++
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG-------TPESVQS 159
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCI 254
R+ +IV+ + S G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 160 AKRLLDQIVEKKEDPDSGFHHGDGPGNAFQEIMIPASKAGLVIGKGGETIKQLQERAG-- 217
Query: 255 VRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 218 VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 257
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG + +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 184 PGNAFQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 243
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 244 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P +R+ ++ G A E+I LR
Sbjct: 300 KKIQNDAGVRIQF-----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLR 345
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T ER I+ + +
Sbjct: 283 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITD 342
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 343 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 402
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 403 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 444
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 380 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 418
>gi|453088188|gb|EMF16228.1| KH domain RNA-binding protein [Mycosphaerella populorum SO2202]
Length = 369
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 137/319 (42%), Gaps = 53/319 (16%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + ++T R + PG +R + ++
Sbjct: 44 TLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTG--------- 94
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST-------KLLVPASQAGSLIGKQGG 242
++G+ + + D L AP G GG V+ +LL+ +Q G++IG+QG
Sbjct: 95 -ILNGIADAYGLVADCL---VKGAPQMGIGGSVAAAPNTHPIRLLISHNQMGTIIGRQGL 150
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRS 302
+K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K LVD
Sbjct: 151 KIKQIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPDGIQKAVWEIG----KCLVDDE 202
Query: 303 IIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSG-GPGYGHNP--QYMPPPRQAE-SYY 358
Q + + P + G P +G G G+N Y A+ +
Sbjct: 203 ---------QRGYGTVLYSPSVRVGGGAPAAPLNGTGESRGYNAPRSYNRTGNGADFTSG 253
Query: 359 PPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIG 418
PA PP + G P V + Q TQ + IP +IG
Sbjct: 254 APASYPP--RRNGASEGGGGGSGPPPRVEEGEDIQ---------TQNISIPADMVGCIIG 302
Query: 419 TAGASISYIRRSSGATVTI 437
G+ IS IR+SSGA ++I
Sbjct: 303 RGGSKISEIRKSSGARISI 321
>gi|417403740|gb|JAA48667.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 667
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 128 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 177
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 178 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 236
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 237 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 277
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 204 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 263
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 264 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 319
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 320 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 365
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 303 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 362
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 363 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 422
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 423 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 464
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 400 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 438
>gi|332809276|ref|XP_003308215.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|397472596|ref|XP_003807826.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
paniscus]
gi|426330098|ref|XP_004026061.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|194390162|dbj|BAG61843.1| unnamed protein product [Homo sapiens]
Length = 665
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 128 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 177
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 178 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 236
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 237 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 277
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 204 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 263
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 264 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 319
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P +R+ ++ G A E+I LR
Sbjct: 320 KKIQNDAGVRIQF-----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLR 365
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T ER I+ + +
Sbjct: 303 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITD 362
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 363 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 422
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 423 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 464
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 400 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 438
>gi|169608844|ref|XP_001797841.1| hypothetical protein SNOG_07507 [Phaeosphaeria nodorum SN15]
gi|160701727|gb|EAT84973.2| hypothetical protein SNOG_07507 [Phaeosphaeria nodorum SN15]
Length = 561
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 27/173 (15%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAM 193
+L+ + VG +IGR+GE +++I +E+ RI+ ++GP +R I+ + P A
Sbjct: 198 ILIDSSLVGLVIGRQGESLRRIEQESNTRIQFINGPEAGPQRQCRITGQ-------PSAR 250
Query: 194 DGLLRVHKRIVD----------GLDSDSSHAPSG------TGGKVSTKLLVPASQAGSLI 237
R RI++ G +S P G G+ S++++VP G +I
Sbjct: 251 ISAKREINRIIEENGGNPARETGRNSKPGAKPVGQQQPALREGEQSSQIMVPDRTVGLII 310
Query: 238 GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
G+ G T++ +QE S C V ++G E+ V L R V ++G + A ELI
Sbjct: 311 GRGGETIRDLQERSGCHVNIVG-ENKSVNGL---RPVNLIGSPAAAAHAKELI 359
>gi|393236643|gb|EJD44191.1| eukaryotic type KH-domain (KH-domain type I) [Auricularia delicata
TFB-10046 SS5]
Length = 450
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R L+ Q IIG+ G + +I E++ AR+ + + PG ER + +S
Sbjct: 99 MRCLIVTQDASIIIGKGGAHVNEIREKSGARVVVSESIPGNPERILNVSGP--------- 149
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
+D + + IV ++ + PS G + V+ K ++P S+ GS+IGK G +K IQEA
Sbjct: 150 -LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGVKIKEIQEA 208
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
S R+ +E V +RV+ V G A +H A IG+ L
Sbjct: 209 SGA--RLNASEG--VLPGSTERVLSVAGVADAIHIATYYIGNIL 248
>gi|390177064|ref|XP_003736269.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858893|gb|EIM52342.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 554
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEP-ES 187
++LVPA G+IIG+ GE I + ++T AR+K+ D PGTTER +I+ E
Sbjct: 52 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 111
Query: 188 SLPPAMDGLLR---VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
L MD + + +I+D + K+LVP S AG +IGK G +
Sbjct: 112 VLDFIMDKIREKPDLTTKIIDAESKQTQERDK------QVKILVPNSTAGMIIGKGGAFI 165
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHL 294
K I+E S V++ ++ +LQ +R + ++GD A ++I S +
Sbjct: 166 KQIKEDSGSYVQI--SQKPKDVSLQ-ERCITIIGDKENNKNACKMILSKI 212
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 64/335 (19%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTT 173
++GS +K+ P +P RMLVP Q VG+IIG++G IK I ++T++++ I G
Sbjct: 188 SLGSRQKQ-PDFP----LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAA 242
Query: 174 ERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQA 233
E+ + I + E S+ A ++ + ++ + +D+ + + K+L S
Sbjct: 243 EKPITIHSTPEGCST---ACHMIMDIMQK--EAVDTKVTE-------DIPLKILAHNSLV 290
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSH 293
G LIGK+G +K I+E + + + +DL ++ +R + V G +A I
Sbjct: 291 GRLIGKEGRNLKKIEEDTETKITISSLQDLTIY--NPERTIIVKGSIEACCRAEVEIMKK 348
Query: 294 LRKFLVD--------RSIIPLFEMH-MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN 344
LR+ + ++IP + + + + + +PP P+G+PP P G+N
Sbjct: 349 LREAYENDVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAG---PRGIPPV--PPTGYN 403
Query: 345 PQYMPPPRQAESYY--PPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQV 402
P ++ Q Y PPA GIS +AP Q
Sbjct: 404 P-FLGHSSQLGGLYGVPPAS-----------GISHQHTQAP----------------EQE 435
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI 437
+ IP A+IG G I + R +GA++ I
Sbjct: 436 VVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI 470
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEEP 185
P + V + +P Q VG+IIG+KG+ IK++ A IKI P T+R V+I+
Sbjct: 432 PEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITG---- 487
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
PP + + RI L ++ + K+ T + VP+S AG +IGK G TV
Sbjct: 488 ----PP--EAQFKAQGRIFGKLKEENFFT-AKEEVKLETHIKVPSSAAGRVIGKGGKTVN 540
Query: 246 SIQEASNCIVRV 257
+Q ++ V V
Sbjct: 541 ELQNLTSAEVIV 552
>gi|313240346|emb|CBY32688.1| unnamed protein product [Oikopleura dioica]
Length = 568
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 136/325 (41%), Gaps = 61/325 (18%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKI--VEETRARIKILDGP-PGTTERAVMISAKEEPESS 188
+MLVPA VG+IIG+ G +++I ++++RAR+ + PG+ + A + A PE+
Sbjct: 196 LKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIYGA---PEAC 252
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
A+ L V K D ++ K+L + G LIG+ G +K +Q
Sbjct: 253 GAAAIRILEIVRKEEKD--------------NELPLKVLAHNALIGRLIGRDGRNLKHVQ 298
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFE 308
+ + + + +L + + DR + + G+ G+ +A + I LR+F D + +
Sbjct: 299 DKTGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLRQFETDMAAMSQQS 356
Query: 309 MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPME 368
++ + + QM P QS P A PP
Sbjct: 357 LYPGLNSQQMQMFPGLQS--------------------------------PTA---PPAY 381
Query: 369 KQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIR 428
+QG S + + +V S N+ S TQ T + IP A+IG+ G I I
Sbjct: 382 NVSYQG-SYFFKNVSQSVFFSGNSSSNN---TQETVTLLIPSGAVGAIIGSRGTHIRNIS 437
Query: 429 RSSGATVTIQETRGVPGEMTVEISG 453
R +GA++ I + V I G
Sbjct: 438 RIAGASIRIHVNADRDAKARVTIVG 462
>gi|426215782|ref|XP_004002148.1| PREDICTED: far upstream element-binding protein 1 isoform 3 [Ovis
aries]
Length = 665
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 128 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 177
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 178 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 236
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 237 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 277
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 204 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 263
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 264 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 319
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 320 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 365
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 303 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 362
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 363 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 422
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 423 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 464
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 400 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 438
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 64/335 (19%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTT 173
++GS +K+ P +P RMLVP Q VG+IIG++G IK I ++T++++ I G
Sbjct: 188 SLGSRQKQ-PDFP----LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAA 242
Query: 174 ERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQA 233
E+ + I + E S+ A ++ + ++ + +D+ + + K+L S
Sbjct: 243 EKPITIHSTPEGCST---ACHMIMDIMQK--EAVDTKVTE-------DIPLKILAHNSLV 290
Query: 234 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSH 293
G LIGK+G +K I+E + + + +DL ++ +R + V G +A I
Sbjct: 291 GRLIGKEGRNLKKIEEDTETKITISSLQDLTIY--NPERTIIVKGSIEACCRAEVEIMKK 348
Query: 294 LRKFLVD--------RSIIPLFEMH-MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHN 344
LR+ + ++IP + + + + + +PP P+G+PP P G+N
Sbjct: 349 LREAYENDVAAINQQSNLIPGLSLSALGIFSTGLSVLPPA---AGPRGIPPV--PPTGYN 403
Query: 345 PQYMPPPRQAESYY--PPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQV 402
P ++ Q Y PPA GIS +AP Q
Sbjct: 404 P-FLGHSSQLGGLYGVPPAS-----------GISHQHTQAP----------------EQE 435
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI 437
+ IP A+IG G I + R +GA++ I
Sbjct: 436 VVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI 470
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEEP 185
P + V + +P Q VG+IIG+KG+ IK++ A IKI P T+R V+I+
Sbjct: 432 PEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITG---- 487
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVK 245
PP + + RI L ++ + K+ T + VP+S AG +IGK G TV
Sbjct: 488 ----PP--EAQFKAQGRIFGKLKEENFFT-AKEEVKLETHIKVPSSAAGRVIGKGGKTVN 540
Query: 246 SIQEASNCIVRV 257
+Q ++ V V
Sbjct: 541 ELQNLTSAEVIV 552
>gi|395536741|ref|XP_003770370.1| PREDICTED: far upstream element-binding protein 1 [Sarcophilus
harrisii]
Length = 621
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 84 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 133
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 134 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 192
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 193 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 233
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 160 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 219
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 220 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 275
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 276 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 321
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 259 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 318
Query: 196 LLR---------VHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR S + GG +VP + G +IGK G T+KS
Sbjct: 319 LLRSVQAGNPGGPGPGGRGRGRGQGSWSMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 378
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 379 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 420
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 356 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 394
>gi|390466103|ref|XP_003733520.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Callithrix jacchus]
gi|395821884|ref|XP_003784260.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Otolemur garnettii]
gi|403257698|ref|XP_003921435.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410967580|ref|XP_003990296.1| PREDICTED: far upstream element-binding protein 1 isoform 3 [Felis
catus]
Length = 665
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 128 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 177
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 178 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 236
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 237 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 277
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 204 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 263
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 264 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 319
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 320 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 365
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 303 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 362
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 363 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 422
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 423 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 464
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 400 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 438
>gi|338725292|ref|XP_001496721.3| PREDICTED: far upstream element-binding protein 1 [Equus caballus]
Length = 644
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 155
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 156 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 214
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 215 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 255
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 182 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 241
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 242 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 297
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 298 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 343
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 281 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 340
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 341 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 400
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 401 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 442
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 378 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 416
>gi|301773894|ref|XP_002922363.1| PREDICTED: far upstream element-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 646
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 155
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 156 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 214
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 215 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 255
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 182 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 241
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 242 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 297
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 298 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 343
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 281 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 340
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 341 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 400
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 401 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 442
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 378 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 416
>gi|398389867|ref|XP_003848394.1| hypothetical protein MYCGRDRAFT_111290 [Zymoseptoria tritici
IPO323]
gi|339468269|gb|EGP83370.1| hypothetical protein MYCGRDRAFT_111290 [Zymoseptoria tritici
IPO323]
Length = 879
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 145/381 (38%), Gaps = 38/381 (9%)
Query: 133 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPA 192
R ++ + + ++IG+ GE + +I + A+ + + G ER + +S
Sbjct: 138 RAIISSAEAATVIGKGGENVTQIRKMAGAKCTVSEYTRGAVERILTVSG----------L 187
Query: 193 MDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-TKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+D + + I+ L+ + PS K +LL+P GS+IGKQG ++ IQEAS
Sbjct: 188 VDAVAKAFGLIIRTLNQEPLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEAS 247
Query: 252 --------NCI-------VRVLGAEDLPVFALQ--DDRVVEVVGDASGVHKAMELIGSHL 294
+C+ + VLG D A +VE + D G A G H
Sbjct: 248 GARLNASESCLPLSTERSLVVLGVADAVHIATYYVGSTLVEQLTDRFGGAAASNYAGRHG 307
Query: 295 RKFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQA 354
V + + Q QM H P P YG + PP+Q
Sbjct: 308 GPQGVVPGGMQVVPYVPQHTGGQMGH--PENFRKPQGPPQRGPPNAYGQPYMHGQPPQQH 365
Query: 355 ESYYPPADLPPPMEKQPHQGI-----SAYGREAPVNVHGSSNAQSTPSMI--TQVTQQMQ 407
+ P+ G Y AP H Q M+ +TQQ+
Sbjct: 366 PQAAAHYGGGAGSPRAPYVGAGPQQPQPYAHAAPQASHAGPPQQPMQGMVPGQPITQQIF 425
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA-QQLIQ 466
IP A+IG GA I+ IR+ SG+ + I E + E V I+GT Q A L
Sbjct: 426 IPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQMALYMLYS 485
Query: 467 NFMAEAAAPSQAQMGASADQG 487
+ P++ A +QG
Sbjct: 486 RLVPTGVLPTRQTADARDEQG 506
>gi|328712758|ref|XP_003244898.1| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 167/386 (43%), Gaps = 77/386 (19%)
Query: 107 KQENEVNLAVGSTE--KKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIK 164
K ENE +L+ T K+ G + R+L+ +++VG++IG +GE +K I ++ AR+
Sbjct: 6 KTENE-HLSSNGTSLFNKYDGI--DFTIRILLNSREVGNVIGIRGETVKNIRSQSGARVL 62
Query: 165 ILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDS-SHAPSGT--GGK 221
I +G T ER V+IS + R + I GL + S +G G K
Sbjct: 63 ISNGS--TPERIVIISGN----------TIAICRATELI--GLKVEEFSERLNGNWIGPK 108
Query: 222 --VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGD 279
++ KL+VPASQ G +IGK G ++ I+++S + ++G+ LP +R+V + G
Sbjct: 109 TPLTLKLIVPASQCGFIIGKNGSKIREIRDSSRAAI-LVGSNMLPN---STERLVSITGT 164
Query: 280 ASGVHKAMELIGSHLRKFLVD------RSI-------IPLFEMHMQMPNPQMDH-IPPPQ 325
+ + L+ + L+D SI I +FE + + +H IP
Sbjct: 165 TGTISHCVYLVCN----VLLDSPPPNCESIAYHPCKEISVFETCTVIKDLGTEHNIPLTN 220
Query: 326 SWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVN 385
G +GG PA L Q + A R N
Sbjct: 221 LAALGSGTATNGG-------------------INPAALTALAGSQ----LRASNRLNN-N 256
Query: 386 VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGV-- 443
V G +++ S I T + +P +IG G+ I+ IR+ SGATV I ++G
Sbjct: 257 VSGQQYDKNSNSDIDTTT--ISVPDDLIGCIIGRRGSKIAKIRQISGATVHIFRSQGTIE 314
Query: 444 ---PGEMTVEISGTASQVQTAQQLIQ 466
+ + I+G V A+ LI+
Sbjct: 315 NREKVDRRITITGNKESVSVAKYLIE 340
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEE 184
G+ + ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGTTER V+I+ E
Sbjct: 64 GQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSE- 122
Query: 185 PESSLPPAMDGLLRVHKRIVDGL--------DSDSSHAPSGTGGKVSTKLLVPASQAGSL 236
D L VHK +++ + S S + K K++VP S AG +
Sbjct: 123 ---------DSLKSVHKFLMEKIGQAPRPPAKSPSEQNANNNRAK-QVKIVVPNSTAGLI 172
Query: 237 IGKQGGTVKSIQEASNCIVRV----LGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
IGK G T+K I E + V++ +LP +RV+ + G+ KA I
Sbjct: 173 IGKGGATIKFIMEQTGSRVQISQKATSGINLP------ERVITITGEPEQNDKACAFI 224
>gi|448538474|ref|XP_003871504.1| Pbp2 RNA binding protein [Candida orthopsilosis Co 90-125]
gi|380355861|emb|CCG25380.1| Pbp2 RNA binding protein [Candida orthopsilosis]
Length = 579
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 118 STEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
+++K + P FRM P ++ +++G++G I + E+ +I+I D G ER +
Sbjct: 179 ASQKDYESDPSYVSFRMYCPVKEASTVVGKQGAKINHLREKADVKIQISDNLRGVPERII 238
Query: 178 MISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSG-TGGKVSTKLLVPASQAGSL 236
+ E + R IV + + P+ + + + KLLVP + G +
Sbjct: 239 TVRGTAE----------NVARAFGLIVRTILGEPEDVPANLSSQQYNLKLLVPNAIIGYI 288
Query: 237 IGKQGGTVKSIQEASNCIVRVLGAED-LPVFALQDDRVVEVVGDASGVHKAMELIG 291
IGKQG + I+E N ++ AE LP DRV+ V+G A +H A+ I
Sbjct: 289 IGKQGLKFREIEE--NSAAKLKAAEQPLP---HSTDRVLSVLGVADAIHIAVYFIA 339
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
P E Q H SA PV + +S PS V+ +M P+ A V+G GA I
Sbjct: 159 PQPEPQQHLEESAQATSNPV--ASQKDYESDPSY---VSFRMYCPVKEASTVVGKQGAKI 213
Query: 425 SYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI 465
+++R + + I + RGVP E + + GTA V A LI
Sbjct: 214 NHLREKADVKIQISDNLRGVP-ERIITVRGTAENVARAFGLI 254
>gi|354468080|ref|XP_003496495.1| PREDICTED: far upstream element-binding protein 1-like [Cricetulus
griseus]
Length = 649
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 113 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 162
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 163 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 221
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 222 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 262
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 189 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 248
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 249 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 304
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 305 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 350
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 288 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 347
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 348 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 407
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 408 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 449
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 385 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 423
>gi|154275678|ref|XP_001538690.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415130|gb|EDN10492.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225556762|gb|EEH05050.1| KH domain RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 363
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 145/359 (40%), Gaps = 56/359 (15%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R +V +++ G IIG+ G+ + + +ET + + G +R + ++
Sbjct: 45 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGP-------- 96
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPS-GTGGKVST------KLLVPASQAGSLIGKQGGT 243
+ G + + + GL AP G GG S +LL+ +Q G++IG+QG
Sbjct: 97 --LQGTAKAYAIVAKGL---LEGAPQLGMGGVASNNGTHPVRLLISHNQMGTIIGRQGLK 151
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD--- 300
+K IQ+AS VR++ +++ +R+VEV G G+ KA+ IG K L+D
Sbjct: 152 IKYIQDASG--VRMVAQKEM--LPQSTERIVEVQGTPEGIEKAVWEIG----KCLIDDWQ 203
Query: 301 RSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPP 360
R + ++ + P S G GG Y Q Y
Sbjct: 204 RGTGTV--LYNPAVRASVGGGPLNNSLGSGASTGGYGGRSYNRTGNGADFSDQTGGYNRR 261
Query: 361 ADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTA 420
++ A R P+ Q TQ + IP +IG
Sbjct: 262 SNS------------DAASRGIPLVTEDGEEVQ---------TQNISIPSDMVGCIIGRG 300
Query: 421 GASISYIRRSSGATVTIQET-RGVPGEMTVEISGTASQVQTAQQLI-QNFMAEAAAPSQ 477
G+ IS IRRSSGA ++I + GE I G+A+ + A L+ +N AE SQ
Sbjct: 301 GSKISEIRRSSGARISIAKAPHDETGERMFTIMGSAAANEKALYLLYENLEAEKMRRSQ 359
>gi|440898065|gb|ELR49638.1| Far upstream element-binding protein 1 [Bos grunniens mutus]
Length = 675
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 138 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 187
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 188 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 246
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 247 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 287
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 214 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 273
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 274 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 329
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 330 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 375
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 12/165 (7%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 313 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 372
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGK-QGGTVK 245
LLR + G GG +VP + G +IGK +G T+K
Sbjct: 373 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGRGETIK 432
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
SI + S R+ + P A + ++ + G + A +LI
Sbjct: 433 SISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 475
>gi|194382840|dbj|BAG64590.1| unnamed protein product [Homo sapiens]
Length = 629
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 155
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 156 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 214
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 215 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 255
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 182 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 241
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 242 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 297
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P +R+ ++ G A E+I LR
Sbjct: 298 KKIQNDAGVRIQF-----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLR 343
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T ER I+ + +
Sbjct: 281 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITD 340
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 341 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 400
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 401 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 442
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 378 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 416
>gi|154310385|ref|XP_001554524.1| hypothetical protein BC1G_07112 [Botryotinia fuckeliana B05.10]
Length = 553
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE---------RAVMI 179
++V + + + VG IIGR+GE ++++ ET R++ + GP T RA
Sbjct: 185 DNVESISIESNLVGLIIGRQGENLRRVESETGCRVQFITGPDETGPFRTCKITGPRARRA 244
Query: 180 SAKEE-----PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
AK E +S L P D R DSSH P+ G+ S +++VP G
Sbjct: 245 DAKAEITRIIDDSGLGPLSDRAPREQN-----ATRDSSHQPALRDGEDSMQIMVPDRTVG 299
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+IG+ G T++ +QE S C V ++G E V L R V ++G A +LI
Sbjct: 300 LIIGRGGETIRDLQERSGCHVNIVG-EQKSVNGL---RPVNLIGTREAAAMAKDLI 351
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP-----------GTTERA 176
GE +++VP + VG IIGR GE I+ + E + + I+ GT E A
Sbjct: 285 GEDSMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSVNGLRPVNLIGTREAA 344
Query: 177 VM-----ISAKEEPESSLPPAMDGLLRVHKR--IVDGLDSDSSHAPSGTGGKVSTKLLVP 229
M + E S P R + R G + G G K++ + VP
Sbjct: 345 AMAKDLIMEIVESDSKSAPKERAPAPRENNRDAGYGGGYASGGAGGGGQGDKINDSIFVP 404
Query: 230 ASQAGSLIGKQGGTVKSIQEASNCIVRV 257
+ G +IGK G T+K +Q + C + V
Sbjct: 405 SEAVGMIIGKGGETIKDMQNTTGCKINV 432
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ P +S+
Sbjct: 19 TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---PTNSIF 73
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVK 245
A + + + D + +G GG VS +L+VPASQ GSLIGK G +K
Sbjct: 74 KAFTLICKKFEEWCSQFH-DVPGSGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIK 132
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
I+E + ++V +E LP +R V + G + + + +
Sbjct: 133 EIREVTGASIQV-ASEMLPN---STERAVTISGTSEAITQCI 170
>gi|383422519|gb|AFH34473.1| far upstream element-binding protein 1 [Macaca mulatta]
Length = 643
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 155
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 156 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 214
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 215 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 255
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 182 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 241
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 242 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 297
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P +R+ ++ G A E+I LR
Sbjct: 298 KKIQNDAGVRIQF-----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLR 343
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T ER I+ + +
Sbjct: 281 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITD 340
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 341 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 400
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 401 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 442
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 378 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 416
>gi|356495760|ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800173 [Glycine max]
Length = 793
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 58/295 (19%)
Query: 95 EDIVPEDSQLQEKQENEVNLAVGSTE-----------KKWPGWPGESVFRML-VPAQKVG 142
+D +D+ +KQ N V+ A+ + E +K P E R + VP KVG
Sbjct: 151 KDSTEQDASSGDKQPNSVDTALHNVEVPYNKQDTSSGQKQPTSGDEITTRKIEVPNNKVG 210
Query: 143 SIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMISAKEEPESSLPPAMDGLLRV 199
+IG+ G+ I+ + + A+I+I D P R+V + E ++D ++
Sbjct: 211 VLIGKAGDTIRYLQYNSGAKIQITRDADADPLCATRSVELIGSLE-------SIDKAEKL 263
Query: 200 HKRIVDGLDSDSSHAPS----------GTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
++ ++D+ +PS T G ++ VP + G +IG+ G T+KS+Q
Sbjct: 264 MNAVI--AEADAGGSPSLVARGLSPAQATVGSEQIQIQVPNEKVGLIIGRGGETIKSLQT 321
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEM 309
S ++++ + LP +R V+V GD + A ELI K ++++ + P
Sbjct: 322 KSGARIQLI-PQHLPEGDDSKERTVQVTGDKRQIEIAQELI-----KEVMNQPVRPSSGG 375
Query: 310 HMQMPNPQMDHIPPPQSWGPPQ--------GLPPS-----GGPGYGHNPQYMPPP 351
Q + PP S GPPQ G P + GP HN Y PPP
Sbjct: 376 FG-----QQAYRPPRGSGGPPQWGQRGSHFGQPTAYDYQHRGPYPSHNQPYAPPP 425
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 368 EKQPHQGISA-YGREAPVNVHGSSNAQSTPSMITQVT-QQMQIPLSYADAVIGTAGASIS 425
+KQP+ +A + E P N +S+ Q P+ ++T +++++P + +IG AG +I
Sbjct: 162 DKQPNSVDTALHNVEVPYNKQDTSSGQKQPTSGDEITTRKIEVPNNKVGVLIGKAGDTIR 221
Query: 426 YIRRSSGATVTIQETRGVPGE-----MTVEISGTASQVQTAQQLIQNFMAEAAA 474
Y++ +SGA + I TR + +VE+ G+ + A++L+ +AEA A
Sbjct: 222 YLQYNSGAKIQI--TRDADADPLCATRSVELIGSLESIDKAEKLMNAVIAEADA 273
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 405 QMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPG----EMTVEISGTASQVQT 460
Q+Q+P +IG G +I ++ SGA + + G E TV+++G Q++
Sbjct: 297 QIQVPNEKVGLIIGRGGETIKSLQTKSGARIQLIPQHLPEGDDSKERTVQVTGDKRQIEI 356
Query: 461 AQQLIQNFMAEAAAPSQAQMGASADQGYNP 490
AQ+LI+ M + PS G Q Y P
Sbjct: 357 AQELIKEVMNQPVRPSSGGFG---QQAYRP 383
>gi|17402900|ref|NP_003893.2| far upstream element-binding protein 1 [Homo sapiens]
gi|332809274|ref|XP_513511.3| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
troglodytes]
gi|397472594|ref|XP_003807825.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Pan
paniscus]
gi|426330096|ref|XP_004026060.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|116241370|sp|Q96AE4.3|FUBP1_HUMAN RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1; AltName: Full=DNA helicase
V; Short=hDH V
gi|17158056|gb|AAA17976.2|AAA17976 FUSE binding protein [Homo sapiens]
gi|119626761|gb|EAX06356.1| far upstream element (FUSE) binding protein 1, isoform CRA_a [Homo
sapiens]
gi|380817628|gb|AFE80688.1| far upstream element-binding protein 1 [Macaca mulatta]
gi|410225756|gb|JAA10097.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410258414|gb|JAA17174.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410301636|gb|JAA29418.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410331317|gb|JAA34605.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
Length = 644
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 156
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 157 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 215
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 216 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 256
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 183 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 242
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 243 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 298
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P +R+ ++ G A E+I LR
Sbjct: 299 KKIQNDAGVRIQF-----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLR 344
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T ER I+ + +
Sbjct: 282 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITD 341
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 342 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 401
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 402 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 443
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 379 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 417
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 23/162 (14%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+++ ++VGSIIG+KGE +K+ EE+ A+I I DG ER V ++ P +++
Sbjct: 17 IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG---PTNAIFK 71
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK------VSTKLLVPASQAGSLIGKQGGTVK 245
A + + + + SG G ++ +L+VPASQ GSLIGK G +K
Sbjct: 72 AFSLICKKFE--------EFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIK 123
Query: 246 SIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAM 287
I+E + ++V +E LP +R V + G + + + +
Sbjct: 124 EIREVTGASIQV-ASEMLPN---STERAVTISGTSEAITQCI 161
>gi|57529674|ref|NP_001006535.1| far upstream element-binding protein 1 [Gallus gallus]
gi|53136708|emb|CAG32683.1| hypothetical protein RCJMB04_32l4 [Gallus gallus]
Length = 627
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 19/177 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 104 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 153
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 154 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 212
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI-IPLF 307
V+++ +D P D+ + + GD V +A E++ +R R + IP F
Sbjct: 213 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVPIPRF 266
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 27/171 (15%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+ +
Sbjct: 180 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITG--D 237
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
P ++ K +V L D GG ++ +P G +IG+ G +
Sbjct: 238 PYK---------VQQAKEMVLELIRDQ-------GG--FREVPIPRFAVGIVIGRNGEMI 279
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 280 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 325
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Query: 132 FRML-VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
FR + +P VG +IGR GE IKKI + RI+ T +R I+ +
Sbjct: 258 FREVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAA 317
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGT----------GGKVSTKLLVPASQAGSLIGKQ 240
+ LLR + G G GG +VP + G +IGK
Sbjct: 318 EIITDLLRSVQAGNPGGPGGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKG 377
Query: 241 GGTVKSIQEASNCIVRV 257
G T+KSI + S + +
Sbjct: 378 GETIKSISQQSGARIEL 394
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 361 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 399
>gi|355558120|gb|EHH14900.1| hypothetical protein EGK_00902 [Macaca mulatta]
gi|355761156|gb|EHH61761.1| hypothetical protein EGM_19848 [Macaca fascicularis]
Length = 654
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 156
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 157 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 215
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 216 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 256
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 183 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 242
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 243 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 298
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P +R+ ++ G A E+I LR
Sbjct: 299 KKIQNDAGVRIQF-----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLR 344
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T ER I+ + +
Sbjct: 282 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITD 341
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 342 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 401
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 402 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 443
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 379 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 417
>gi|347828793|emb|CCD44490.1| hypothetical protein [Botryotinia fuckeliana]
Length = 550
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE---------RAVMI 179
++V + + + VG IIGR+GE ++++ ET R++ + GP T RA
Sbjct: 185 DNVESISIESNLVGLIIGRQGENLRRVESETGCRVQFITGPDETGPFRTCKITGPRARRA 244
Query: 180 SAKEE-----PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
AK E +S L P D R DSSH P+ G+ S +++VP G
Sbjct: 245 DAKAEITRIIDDSGLGPLSDRAPREQN-----ATRDSSHQPALRDGEDSMQIMVPDRTVG 299
Query: 235 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+IG+ G T++ +QE S C V ++G E V L R V ++G A +LI
Sbjct: 300 LIIGRGGETIRDLQERSGCHVNIVG-EQKSVNGL---RPVNLIGTREAAAMAKDLI 351
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Query: 128 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP-----------GTTERA 176
GE +++VP + VG IIGR GE I+ + E + + I+ GT E A
Sbjct: 285 GEDSMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSVNGLRPVNLIGTREAA 344
Query: 177 VM-----ISAKEEPESSLPPAMDGLLRVHKR--IVDGLDSDSSHAPSGTGGKVSTKLLVP 229
M + E S P R + R G + G G K++ + VP
Sbjct: 345 AMAKDLIMEIVESDSKSAPKERAPAPRENNRDAGYGGGYASGGAGGGGQGDKINDSIFVP 404
Query: 230 ASQAGSLIGKQGGTVKSIQEASNCIVRV 257
+ G +IGK G T+K +Q + C + V
Sbjct: 405 SEAVGMIIGKGGETIKDMQNTTGCKINV 432
>gi|297278996|ref|XP_001103908.2| PREDICTED: far upstream element-binding protein 1 [Macaca mulatta]
gi|402855025|ref|XP_003892147.1| PREDICTED: far upstream element-binding protein 1 [Papio anubis]
gi|16878077|gb|AAH17247.1| FUBP1 protein [Homo sapiens]
gi|123998487|gb|ABM86845.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
gi|157929090|gb|ABW03830.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
Length = 653
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 155
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 156 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 214
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 215 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 255
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 182 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 241
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 242 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 297
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P +R+ ++ G A E+I LR
Sbjct: 298 KKIQNDAGVRIQF-----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLR 343
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T ER I+ + +
Sbjct: 281 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITD 340
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 341 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 400
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 401 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 442
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 378 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 416
>gi|387015918|gb|AFJ50078.1| Far upstream element-binding protein 1-like [Crotalus adamanteus]
Length = 682
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ P ++
Sbjct: 126 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG-------TPESVQS 178
Query: 196 LLRVHKRIVD-GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCI 254
R+ +IV+ G + H G G V ++++PAS+AG +IGK G T+K +QE +
Sbjct: 179 AKRLLDQIVEKGRPTPGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQERAG-- 235
Query: 255 VRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 236 VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLDLIR 275
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 202 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 261
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 262 KVQQAKEMVLDLIRDQ----GGFREVRNEYGSRIGGNEGLDVPIPRFAVGIVIGRNGEMI 317
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 318 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 363
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 301 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 360
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 361 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 420
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 421 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 462
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 398 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 436
>gi|291398647|ref|XP_002715950.1| PREDICTED: far upstream element-binding protein [Oryctolagus
cuniculus]
Length = 643
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 155
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 156 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 214
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 215 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 255
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 182 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 241
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 242 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 297
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 298 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 343
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 281 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 340
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 341 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 400
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 401 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 442
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 378 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 416
>gi|417403610|gb|JAA48604.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 647
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 156
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 157 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 215
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 216 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 256
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 183 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 242
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 243 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 298
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 299 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 344
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 282 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 341
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 342 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 401
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 402 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 443
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 379 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 417
>gi|417403606|gb|JAA48602.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 646
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 156
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 157 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 215
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 216 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 256
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 183 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 242
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 243 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 298
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 299 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 344
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 282 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 341
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 342 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 401
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 402 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 443
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 379 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 417
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.130 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,216,881,220
Number of Sequences: 23463169
Number of extensions: 445536581
Number of successful extensions: 1983610
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2647
Number of HSP's successfully gapped in prelim test: 8752
Number of HSP's that attempted gapping in prelim test: 1830240
Number of HSP's gapped (non-prelim): 105603
length of query: 521
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 374
effective length of database: 8,910,109,524
effective search space: 3332380961976
effective search space used: 3332380961976
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 79 (35.0 bits)