BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009973
(521 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 44/351 (12%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMI--SAKEEPESS 188
V+R+L P VG +IG+ G+ I I T+A+IK+ D G ++R + I S KE+ E
Sbjct: 37 VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96
Query: 189 ---------LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGK 239
L A D LL+V+ IV + +++ +LLVP SQ+ SLIGK
Sbjct: 97 GFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGK 156
Query: 240 QGGTVKSIQEASNCIVRVLGAEDLP----VFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
G +K I+ + V+V+ ++D+ V A++ D VV + G+ V +A+ + + +
Sbjct: 157 AGENIKRIRRRTRASVKVV-SKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMY 215
Query: 296 KFLVDRSIIPLFEMHMQMPNPQM-------DHIPPPQSWGPPQGLPPSGGPGYGHNPQYM 348
K + R IPL +P + + + P + Q G G P Y
Sbjct: 216 K-INPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGV---PSYF 271
Query: 349 PPPRQAE--SYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
++ Y A P P+ + PV HG + + ++ +V
Sbjct: 272 NALSVSDFQGYAETAANPVPV----------FASSLPVT-HGFGGSSRSEELVFKVL--- 317
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQ 457
PL VIG G++I IR +SG+ + + ++R G+ I TA++
Sbjct: 318 -CPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATE 367
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 145/344 (42%), Gaps = 54/344 (15%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG--PPGTTERAVMISAKEEPE 186
E VF++L P + +IG+ G IK+I E + + I++ D G E ++++A E P+
Sbjct: 311 ELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPD 370
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
A++ +L + + I D D+ + V +LLV + G +IGK G +
Sbjct: 371 DMKSMAVEAVLLLQEYIN---DEDAEN--------VKMQLLVSSKVIGCVIGKSGSVINE 419
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK-FLVDRSIIP 305
I++ +N ++ + + D +VEV G+ S V A+ I LR+ L D+ +
Sbjct: 420 IRKRTN--------ANICISKGKKDDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVA 471
Query: 306 LFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPP 365
+ PP L S GY P +M ++ P
Sbjct: 472 TRK--------------PPARTDNCSFLSGSSNAGYTL-PSFMSSMASTSGFHGYGSFP- 515
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
A NV GS+ S + + ++ IP V+G G ++
Sbjct: 516 ----------------AGDNVLGSTGPYSYGRLPSSSALEILIPAHAMSKVMGKGGGNLE 559
Query: 426 YIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 469
IRR SGA + I ++ G+ +SGT Q++ A+ L+Q F+
Sbjct: 560 NIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAFV 603
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 225
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 343
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 344 ----NARLSSEKGMGCS 356
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 210 DSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQ 269
D+ SG ++ +LL+ + GS+IGK+G +VK I+E S + + + P
Sbjct: 2 DAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP----- 55
Query: 270 DDRVVEVVGDASGVHKAMELI 290
+R++ + G + + KA +I
Sbjct: 56 -ERIITLTGPTNAIFKAFAMI 75
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
++ + +P +G IIGR+G I +I + + A+IKI + G++ R V I+
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 225
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 343
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 344 ----NARLSSEKGMGCS 356
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 210 DSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQ 269
D+ SG ++ +LL+ + GS+IGK+G +VK I+E S + + + P
Sbjct: 2 DAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP----- 55
Query: 270 DDRVVEVVGDASGVHKAMELI 290
+R++ + G + + KA +I
Sbjct: 56 -ERIITLTGPTNAIFKAFAMI 75
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
++ + +P +G IIGR+G I +I + + A+IKI + G++ R V I+
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 225
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 343
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 344 ----NARLSSEKGMGCS 356
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 210 DSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQ 269
D+ SG ++ +LL+ + GS+IGK+G +VK I+E S + + + P
Sbjct: 2 DAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP----- 55
Query: 270 DDRVVEVVGDASGVHKAMELI 290
+R++ + G + + KA +I
Sbjct: 56 -ERIITLTGPTNAIFKAFAMI 75
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
++ + +P +G IIGR+G I +I + + A+IKI + G++ R V I+
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +K+I EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERII----------TLTG 63
Query: 192 AMDGLLRVHKRIVDGLDSD--SSHAPSGTGGK--VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D SS S + V+ +L+VPA+Q GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G V + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGVPQSVTECVKQI------------CLVML 167
Query: 308 EMHMQMPNPQMDHIP-PPQSWGPPQGLPPSGG-------PGYGHNPQYMP-PPRQAESY- 357
E Q P ++ IP P P + +GG GY H + PP A S
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASSP--VICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQ 225
Query: 358 ----YPPADLPP--PMEKQPHQGISAYGREAPVNVHGSS----NAQSTPSMITQVTQQMQ 407
P DL + +Q +G + SS ++ TQ T ++
Sbjct: 226 GQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT 285
Query: 408 IPLSYADAVIGTAGASISYIRRSSGATVTIQE-TRGVPGEMTVEISGTASQVQTAQQLIQ 466
IP + +IG GA+I+ IR+ SGA + I G G V I+G+A+ + AQ LI
Sbjct: 286 IPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLI- 343
Query: 467 NFMAEAAAPSQAQMGAS 483
A S+ MG S
Sbjct: 344 ----NARLSSEKGMGCS 356
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 210 DSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQ 269
D+ SG ++ +LL+ + GS+IGK+G +VK I+E S + + + P
Sbjct: 2 DAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP----- 55
Query: 270 DDRVVEVVGDASGVHKAMELI 290
+R++ + G + + KA +I
Sbjct: 56 -ERIITLTGPTNAIFKAFAMI 75
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 129 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
++ + +P +G IIGR+G I +I + + A+IKI + G++ R V I+
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 156/349 (44%), Gaps = 50/349 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 209
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD--- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 210 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 363 -LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVI 417
PP + P + + + E N+ G SS ++P T ++ IP +I
Sbjct: 253 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCII 309
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 310 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 189 LPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 248
LP + G L H + G +S + G ++ +LL+ + GS+IGK+G TVK ++
Sbjct: 13 LPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 249 EASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
E S + + + P +R+V + G + KA +I + +++
Sbjct: 73 EESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 291 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 156/349 (44%), Gaps = 50/349 (14%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER V I+
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------- 97
Query: 191 PAMDGLLRVHKRIVDGLDSD----SSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + I + D S++P+ + V+ +L+VPASQ GSLIGK G +K
Sbjct: 98 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 154
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E++ V+V G + LP +R V + G + + ++ I + + + IP
Sbjct: 155 IRESTGAQVQVAG-DMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP- 209
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY-MPPPRQAESYYPPAD--- 362
+ P P S + +GG Y QY +P P Q + A
Sbjct: 210 -------------YRPKPAS----TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 363 -LPPPMEKQPH---QGISAYGREAPVNVHG-SSNAQSTPSMITQVTQQMQIPLSYADAVI 417
PP + P + + + E N+ G SS ++P T ++ IP +I
Sbjct: 253 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP---ASTHELTIPNDLIGCII 309
Query: 418 GTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 466
G G I+ IR+ SGA + I E + I+GT + + AQ LI
Sbjct: 310 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMIS 180
P S + +P +G IIGR+G I +I + + A+IKI + G++ER + I+
Sbjct: 291 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
S LP + L H + G +S + G ++ +LL+ + GS+IGK+G TVK
Sbjct: 11 SVLPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 70
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD 300
++E S + + + P +R+V + G + KA +I + +++
Sbjct: 71 MREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 159/373 (42%), Gaps = 74/373 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + +
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQI------------CVVML 167
Query: 308 EMHMQMP--NPQMDHIPPPQ-------------SWGPPQGLPPSGGPGYGHNPQYMPPPR 352
E Q P + + P P S G P P NP PP
Sbjct: 168 ETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 227
Query: 353 QAESYYPPADLPPPMEKQPHQ---------------GISAYGREAPVNVHG----SSNAQ 393
+A + +P P + HQ G S +P V G ++AQ
Sbjct: 228 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWGLDASAQ 286
Query: 394 STPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISG 453
+T + ++ IP +IG GA I+ IR+ SGA + I + V I+G
Sbjct: 287 TT-------SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITG 339
Query: 454 TASQVQTAQQLIQ 466
+A+ + AQ LI
Sbjct: 340 SAASISLAQYLIN 352
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 210 DSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQ 269
D+ G ++ +LL+ + GS+IGK+G +VK ++E S + + + P
Sbjct: 2 DTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP----- 55
Query: 270 DDRVVEVVGDASGVHKAMELI 290
+R++ + G + + KA +I
Sbjct: 56 -ERIITLAGPTNAIFKAFAMI 75
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 163/392 (41%), Gaps = 90/392 (22%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+G +P Y+P L
Sbjct: 174 ----------------------PPKG-------------ATIP-------YHPSLSLGTV 191
Query: 367 MEKQPHQGISA---YGREAPVNV------HGSSNAQSTPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V G + ++PSM+ TQ +Q+ +P
Sbjct: 192 LLST-NQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPSQAQMGASADQGYNPYASMYGSPPSNP 502
A + S G++ P++ + P+ P
Sbjct: 311 TAKSTSGGTPGSAPTDLPAPFSPPLTALPTAP 342
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++L+ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHL 294
+ V A+ +I L
Sbjct: 70 AAVFHAVSMIAFKL 83
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 157/364 (43%), Gaps = 59/364 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
R+L+ ++VGSIIG+KGE +KK+ EE+ ARI I +G ER + +L
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERII----------TLAG 63
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGK----VSTKLLVPASQAGSLIGKQGGTVKSI 247
+ + + I+D L+ D S + + + V+ +L+VPASQ GSLIGK G +K I
Sbjct: 64 PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 248 QEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLF 307
+E++ V+V G + LP +R + + G + + ++ I + + IP
Sbjct: 124 RESTGAQVQVAG-DMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY- 178
Query: 308 EMHMQMPNPQMDHI-----PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPAD 362
P P + S G P P NP PP +A +
Sbjct: 179 -----RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYA 233
Query: 363 LPPPMEKQPHQ---------------GISAYGREAPVNVHG-----SSNAQSTPSMITQV 402
+P P + HQ G S +P V G ++AQ+T
Sbjct: 234 IPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP-EVKGYWAGLDASAQTT------- 285
Query: 403 TQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQ 462
+ ++ IP +IG GA I+ IR+ SGA + I + V I+G+A+ + AQ
Sbjct: 286 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 345
Query: 463 QLIQ 466
LI
Sbjct: 346 YLIN 349
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 210 DSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQ 269
D+ G ++ +LL+ + GS+IGK+G +VK ++E S + + + P
Sbjct: 2 DTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP----- 55
Query: 270 DDRVVEVVGDASGVHKAMELI 290
+R++ + G + + KA +I
Sbjct: 56 -ERIITLAGPTNAIFKAFAMI 75
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 152/366 (41%), Gaps = 90/366 (24%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L + +++
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAIILCVRQICAVILES----- 173
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPP 366
PP+ A Y P+
Sbjct: 174 -------------------------------------------PPKGATIPYHPSLSLGT 190
Query: 367 MEKQPHQGISA---YGREAPVNVHG----SSNAQ--STPSMI------TQV-TQQMQIPL 410
+ +QG S YG P V SS+A +TPS++ TQ +Q+ +P
Sbjct: 191 VLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPN 250
Query: 411 SYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMA 470
VIG G+ IS IR+ SGA + I GE V I+G+ + AQ LI +
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 471 EAAAPS 476
A + S
Sbjct: 311 TAKSTS 316
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 100 EDSQLQEKQENEVNLAVGSTEKKWPGW-PGE--SVFRMLVPAQKVGSIIGRKGEFIKKIV 156
E ++LQ+ + V A T PG PG S LVP +G +IGR+G I +I
Sbjct: 212 EVTKLQQLSSHAVPFA---TPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIR 268
Query: 157 EETRARIKILDGPPGTTERAVMIS 180
+ + A IKI + G ER V I+
Sbjct: 269 QMSGAHIKIGNQAEGAGERHVTIT 292
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++L+ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHL 294
+ V A+ +I L
Sbjct: 70 AAVFHAVSMIAFKL 83
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 162/378 (42%), Gaps = 62/378 (16%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPP 191
RML+ ++VGSIIG+KGE +K+I E++ ARI I +G ER I+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVS-----TKLLVPASQAGSLIGKQGGTVKS 246
+ + I LD D AP+ GG VS +L++PASQ GSLIGK G +K
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPA-NGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
I+E + V+V G + LP +R V V SGV A+ L R I +
Sbjct: 127 IRETTGAQVQVAG-DLLPN---STERAVTV----SGVPDAI---------ILCVRQICAV 169
Query: 307 FEMHMQMPNPQMDHIP--PPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLP 364
++ P P+ IP P S G + S G+ QY PA++
Sbjct: 170 I---LESP-PKGATIPYHPSLSLGT---VLLSANQGFSVQGQY--------GAVTPAEVT 214
Query: 365 PPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASI 424
+ H A +P V G + T S Q+ +P VIG G+ I
Sbjct: 215 KLQQLSGH----AVPFASPSVVPGMDPSTQTSS------QEFLVPNDLIGCVIGRQGSKI 264
Query: 425 SYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGASA 484
S IR+ SGA + I GE V I+G+ + AQ LI + A + S G++
Sbjct: 265 SEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAP 324
Query: 485 DQGYNPYASMYGSPPSNP 502
P++ + P+ P
Sbjct: 325 ADLPTPFSPPLTALPTAP 342
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPVFALQDDRVVEVVGDA 280
++ ++L+ + GS+IGK+G TVK I+E S+ R+ +E P +R+ + G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSS--ARITISEGSCP------ERITTITGST 69
Query: 281 SGVHKAMELIGSHL 294
+ V A+ +I L
Sbjct: 70 AAVFHAVSMIAFKL 83
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 145/350 (41%), Gaps = 74/350 (21%)
Query: 131 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLP 190
R L+ ++ G IIG+ G+ + ++ T + + P +R + IS
Sbjct: 95 TLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISG--------- 145
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVST----KLLVPASQAGSLIGKQGGTVKS 246
++ ++R ++ I+D +S++ P GT +T +LL+ S GS+IG+ G +K
Sbjct: 146 -PLENVVRAYRFIIDIFAKNSTN-PDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKL 203
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVD---RSI 303
IQ+ +C R++ ++D+ +R VE+ G +H A+ IG K L+D R
Sbjct: 204 IQDKCSC--RMIASKDM--LPQSTERTVEIHGTVDNLHAAIWEIG----KCLIDDWERGA 255
Query: 304 IPLFE---MHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESY--- 357
+F + P P + PQ PP + G P SY
Sbjct: 256 GTVFYNPVSRLTQPLPSLASTASPQQVSPPAAPSTTSGEAI---------PENFVSYGAQ 306
Query: 358 -YPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416
+P + P +QP +VTQ + IP +
Sbjct: 307 VFPATQM--PFLQQP-----------------------------KVTQNISIPADMVGCI 335
Query: 417 IGTAGASISYIRRSSGATVTI-QETRGVPGEMTVEISGTASQVQTAQQLI 465
IG G+ IS IRR+SG+ ++I +E GE I+GT + + A L+
Sbjct: 336 IGRGGSKISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKALFLL 385
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 141/364 (38%), Gaps = 54/364 (14%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPE 186
P + RML + I+G KG I +I ET ARI I + G ER V +
Sbjct: 64 PSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRG----- 118
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
D + + + IV L + + +G ++S LL+P G +IGK+G ++
Sbjct: 119 -----TCDDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFL-------V 299
I++ S ++ + + L +DR++ + G +H A I L F V
Sbjct: 174 IEDLS--AAKLFASPNQ--LLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNV 229
Query: 300 DRSIIPLFEMHMQMPNPQMDHIPPPQ----------------SWGPPQGLPPSGGPGYGH 343
RSI + Q + +DH P S+ P + LP S
Sbjct: 230 KRSI---YYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMA 286
Query: 344 NPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVT 403
PQY + + P + P + + PV S A ++ V
Sbjct: 287 TPQYTTASVANATAFQPNFVIP----------NVTVLDGPV----ISPAPGNHLLMNFVQ 332
Query: 404 QQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 463
Q++ I + VIG G I+ ++ S+G ++ IQ+ E + I GT Q A
Sbjct: 333 QEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGTFMASQAAIM 392
Query: 464 LIQN 467
LI N
Sbjct: 393 LISN 396
Score = 36.6 bits (83), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 389 SSNAQSTPSMI-TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI-QETRGVPGE 446
S N +P + + V +M + +A ++G GA+IS I+ + A + I RGVP E
Sbjct: 53 SDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVP-E 111
Query: 447 MTVEISGTASQVQTAQQLIQNFMAE 471
V + GT V A +I + E
Sbjct: 112 RIVYVRGTCDDVAKAYGMIVRALLE 136
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
++ +ET A IK+ D PGTTER +I E +++ + +R + V +
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 210 DSSHAPSGTGG--KVS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
S P T ++ K++VP S AG +IGK G TVK+I E S V++ D
Sbjct: 133 VSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD--GI 190
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 191 NLQ-ERVVTVSGEPEQNRKAVELI 213
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
A+ TEK G + V + VP VG+I+G+ G+ + + E T ARI+I + PG
Sbjct: 385 AILGTEKSTDG--SKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG 442
Query: 172 TTERAVMIS 180
T R V I+
Sbjct: 443 TRNRKVTIT 451
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 15 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 71
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDS 209
++ +ET A IK+ D PGTTER +I E +++ + +R + V +
Sbjct: 72 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP 131
Query: 210 DSSHAPSGTGG--KVS-TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVF 266
S P T ++ K++VP S AG +IGK G TVK+I E S V++ D
Sbjct: 132 VSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD--GI 189
Query: 267 ALQDDRVVEVVGDASGVHKAMELI 290
LQ +RVV V G+ KA+ELI
Sbjct: 190 NLQ-ERVVTVSGEPEQNRKAVELI 212
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
A+ TEK G + V + VP VG+I+G+ G+ + + E T ARI+I + PG
Sbjct: 384 AILGTEKSTDG--SKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG 441
Query: 172 TTERAVMIS 180
T R V I+
Sbjct: 442 TRNRKVTIT 450
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI---LDGPPGTTERAVMIS------------------------AKEEP 185
++ +ET A IK+ D PGTTER +I AK EP
Sbjct: 73 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP 132
Query: 186 ESSLPPAMDGLLRVHKRIVDGLDSDSSHAPS---GTGGKVSTKLLVPASQAGSLIGKQGG 242
S L P K+ + + + +PS T K++VP S AG +IGK G
Sbjct: 133 VSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGA 192
Query: 243 TVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
TVK+I E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 193 TVKAIMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 237
Score = 33.5 bits (75), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
A+ TEK G + V + VP VG+I+G+ G+ + + E T ARI+I + PG
Sbjct: 409 AILGTEKSTDG--SKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG 466
Query: 172 TTERAVMIS 180
T R V I+
Sbjct: 467 TRNRKVTIT 475
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 116 VGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGT 172
V T++ G GE ++L+P+ GSIIG+ G+ I ++ +ET A IK+ D PGT
Sbjct: 19 VVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 78
Query: 173 TERAVMISAKEEPESSLPPAMDGLLR------VHKRIVDGLDSDSSHAPSGTGGKVSTKL 226
TER ++ E +++ + +R +V+ L ++ P KL
Sbjct: 79 TERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK---QAKL 135
Query: 227 LVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKA 286
+VP S AG +IGK G TVK++ E S V++ P +RVV V G+ VHKA
Sbjct: 136 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKA 192
Query: 287 MELI 290
+ I
Sbjct: 193 VSAI 196
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 109/235 (46%), Gaps = 47/235 (20%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFI 152
VP D+ P DS+ K+ E GST++ G G+ ++L+P+ GSIIG+ G+ I
Sbjct: 16 VPIDLDPPDSR---KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTI 72
Query: 153 KKIVEETRARIKI------LDGPPGTTERAVMIS------------------------AK 182
++ +ET A IK+ D PGTTER +I AK
Sbjct: 73 VQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAK 132
Query: 183 EEPESSLPPAMDGLLRVH-KRIVDGLDSDSSHAPSGTGGKVST------KLLVPASQAGS 235
EP S L P V+ RI L S + S ++T K++VP S AG
Sbjct: 133 TEPVSILQPQTT----VNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGL 188
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
+IGK G TVK++ E S V++ D LQ +RVV V G+ KA+ELI
Sbjct: 189 IIGKGGATVKAVMEQSGAWVQLSQKPD--GINLQ-ERVVTVSGEPEQNRKAVELI 240
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 115 AVGSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPG 171
A+ TEK G + V + VP VG+I+G+ G+ + + E T ARI+I + PG
Sbjct: 412 AILGTEKSTDG--SKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG 469
Query: 172 TTERAVMIS 180
T R V I+
Sbjct: 470 TRNRKVTIT 478
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 158/379 (41%), Gaps = 57/379 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G I+ I ++T+++I + G E+A+ I + E
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPE------ 251
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
G K I++ + ++ + T +V K+L + G LIGK+G +K +++
Sbjct: 252 ----GCSAACKMILEIMQKEAKD--TKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQD 305
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G KA + I +R+ + + H
Sbjct: 306 TETKITISSLQDLTLY--NPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSH 363
Query: 311 MQMPNPQMDHI---PPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPM 367
+ +P + + P + PP PPS G +MPP ++ + PA +
Sbjct: 364 L-IPGLNLAAVGLFPASSNAVPP---PPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAI 419
Query: 368 EKQPHQGISAYGREAP-----------------VNVHGSSNAQST--------------- 395
+ Q I R A V + G AQ
Sbjct: 420 IGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFF 479
Query: 396 -PSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEIS 452
P ++ +++P S A VIG G +++ ++ + A V + +T ++ V+I
Sbjct: 480 GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKII 539
Query: 453 GTASQVQTAQQLIQNFMAE 471
G Q AQ+ I++ +A+
Sbjct: 540 GHFYASQMAQRKIRDILAQ 558
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE---RAVMISAKE 183
P + + +PAQ VG+IIG+KG+ IK++ A IKI PP T + R V+I+
Sbjct: 402 PEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI--APPETPDSKVRMVVITG-- 457
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PP + + RI L ++ P K+ T + VPAS AG +IGK G T
Sbjct: 458 ------PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLETHIRVPASAAGRVIGKGGKT 508
Query: 244 VKSIQEAS 251
V +Q +
Sbjct: 509 VNELQNLT 516
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G IK I ++T++R+ I G E+ V I A E S
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 246
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A +L + ++ D + +V K+L G LIGK+G +K I+
Sbjct: 247 -ACRMILEIMQKEAD---------ETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHE 296
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
+ + + +DL ++ +R + V G A I LR+ FE
Sbjct: 297 TGTKITISSLQDLSIY--NPERTITVRGTIEACANAEIEIMKKLRE---------AFEND 345
Query: 311 MQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQ 370
M N Q + IP GL S + +PPP P +PP
Sbjct: 346 MLAVNQQANLIP---------GLNLSALGIFSTGLSVLPPP------AGPRGVPPSPPYH 390
Query: 371 PHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRS 430
P S Y + H S Q T + IP A+IG GA I + R
Sbjct: 391 PFATHSGYF-SSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARF 449
Query: 431 SGATVTI 437
+GA++ I
Sbjct: 450 AGASIKI 456
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 417 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 473
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 474 -----PP--EAQFKAQGRIFGKLKEENFFNPK-EEVKLEAHIRVPSSTAGRVIGKGGKTV 525
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 526 NELQNLTSAEVIV 538
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 182/427 (42%), Gaps = 69/427 (16%)
Query: 93 VPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPG-----WPGESVFRMLVPAQKVGSIIGR 147
+P+++ + + LQ+ + GS+ + PG P + R+LVP Q VG+IIG+
Sbjct: 154 IPDEMAAQQNPLQQPRGRRGLGQRGSSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGK 213
Query: 148 KGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLPPAMDGLLRV-HKRIVD 205
+G I+ I ++T+++I + G E+++ I + E S+ A +L + HK D
Sbjct: 214 EGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSA---ACKSILEIMHKEAQD 270
Query: 206 GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV 265
++ ++ K+L + G LIGK+G +K I++ ++ + + ++L +
Sbjct: 271 IKFTE----------EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL 320
Query: 266 FALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRSIIPLFEMHMQMPNPQ 317
+ +R + V G+ KA E I +R+ + +IP ++ P
Sbjct: 321 Y--NPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPP 378
Query: 318 MDHIPPPQSWGPPQGLPP--------------------SGGPGYGHNPQYMPPPRQ---A 354
+PPP S GPP + P S G G Q++ + A
Sbjct: 379 TSGMPPPTS-GPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 355 ESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVHGSSNAQS--TPSMITQVTQQM 406
PA+ P + P A GR ++G ++ +P ++ +
Sbjct: 438 SIKIAPAEAPDAKVRMVIITGPPEAQFKAQGR-----IYGKIKEENFVSPKEEVKLEAHI 492
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEISGTASQVQTAQQL 464
++P A VIG G +++ ++ S A V + +T ++ V+I+G Q AQ+
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRK 552
Query: 465 IQNFMAE 471
IQ + +
Sbjct: 553 IQEILTQ 559
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 156
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 157 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 215
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 216 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 256
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 183 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 242
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 243 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 298
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P +R+ ++ G A E+I LR
Sbjct: 299 KKIQNDAGVRIQF-----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLR 344
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T ER I+ + +
Sbjct: 282 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITD 341
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 342 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 401
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
I + S R+ + P A + ++ + G + A +LI
Sbjct: 402 ISQQSGA--RIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI 443
Score = 39.7 bits (91), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 379 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 417
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T++ ++P +IG G IS I++ SG + I G E + ++GT VQ+A
Sbjct: 101 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA 160
Query: 462 QQLIQNFM 469
++L+ +
Sbjct: 161 KRLLDQIV 168
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 140/362 (38%), Gaps = 56/362 (15%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP + VG IIGR GE I +I E+ +I+I G ER +++ P +++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT-------PESIEQ 136
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
R+ +IVD + ++L+PAS+ G +IG+ G T+K +QE + +
Sbjct: 137 AKRLLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKM 196
Query: 256 RVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR-------------------- 295
++ LP A D+ + + GDA V +A E++ +R
Sbjct: 197 VMIQDGPLPTGA---DKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMGG 253
Query: 296 --------KFLVDRSIIPLFEMHMQMPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQY 347
+F V I EM ++ N I + P G+ P Q
Sbjct: 254 GSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI----QFKPDDGISPE------RAAQV 303
Query: 348 M-PPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQM 406
M PP R + + ++L + Q G + P + ++T
Sbjct: 304 MGPPDRCQHAAHIISELI--LTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEIT--Y 359
Query: 407 QIPLSYADAVIGTAGASISYIRRSSGATVTIQET---RGVPGEMTVEISGTASQVQTAQQ 463
+P VIG G +I I + SGA V +Q P I G Q++ A+Q
Sbjct: 360 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQ 419
Query: 464 LI 465
LI
Sbjct: 420 LI 421
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGP-PGTTERAVMISAKEEPES 187
++ +L+PA KVG +IGR GE IK++ E T + + I DGP P ++ + I+
Sbjct: 163 TIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQ 222
Query: 188 SLPPAMDGLLRVHKRI-VDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ ++R + G+ D + G +VS VP G +IG+ G +K
Sbjct: 223 QAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVS----VPRFAVGIVIGRNGEMIKK 278
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
IQ + VR+ + P + +R +V+G A +I
Sbjct: 279 IQNDAG--VRI---QFKPDDGISPERAAQVMGPPDRCQHAAHII 317
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 400 TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI-QETRGVPGEMTVEISGTASQV 458
T +T++ ++P +IG G IS I+ SG + I E+ G+P E ++GT +
Sbjct: 76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESI 134
Query: 459 QTAQQLI 465
+ A++L+
Sbjct: 135 EQAKRLL 141
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 151
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 152 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 210
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 211 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 251
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 178 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 237
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 238 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 293
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 294 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 339
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 9/131 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 277 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 336
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 337 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 396
Query: 247 IQEASNCIVRV 257
I + S + +
Sbjct: 397 ISQQSGARIEL 407
Score = 39.3 bits (90), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 374 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 412
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T++ ++P +IG G IS I++ SG + I G E + ++GT VQ+A
Sbjct: 96 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA 155
Query: 462 QQLIQNFM 469
++L+ +
Sbjct: 156 KRLLDQIV 163
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I +I +E+ +I+I G ER+ M++ PES
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES-------- 152
Query: 196 LLRVHKRIVDGLDSDSSHAPS---GTG-GKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
++ KR++D + AP G G G ++++PAS+AG +IGK G T+K +QE +
Sbjct: 153 -VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERA 211
Query: 252 NCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
V+++ +D P D+ + + GD V +A E++ +R
Sbjct: 212 G--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 252
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGT-TERAVMISAKEE 184
PG +V +++PA K G +IG+ GE IK++ E + + I DGP T ++ + I+
Sbjct: 179 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 238
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
+ L+R G + S GG + +P G +IG+ G +
Sbjct: 239 KVQQAKEMVLELIRDQ----GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 294
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K IQ + ++ P DR+ ++ G A E+I LR
Sbjct: 295 KKIQNDAGVRIQF-----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLR 340
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 9/131 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
+P VG +IGR GE IKKI + RI+ T +R I+ + +
Sbjct: 278 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD 337
Query: 196 LLRVHKRIVDGLDSDSSHAPSGT---------GGKVSTKLLVPASQAGSLIGKQGGTVKS 246
LLR + G GG +VP + G +IGK G T+KS
Sbjct: 338 LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS 397
Query: 247 IQEASNCIVRV 257
I + S + +
Sbjct: 398 ISQQSGARIEL 408
Score = 39.3 bits (90), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 170
F +VP K G IIG+ GE IK I +++ ARI++ PP
Sbjct: 375 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPP 413
Score = 36.6 bits (83), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T++ ++P +IG G IS I++ SG + I G E + ++GT VQ+A
Sbjct: 97 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA 156
Query: 462 QQLIQNFM 469
++L+ +
Sbjct: 157 KRLLDQIV 164
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 152/388 (39%), Gaps = 74/388 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G I+ I ++T+++I + G E+A IS PE
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKA--ISVHSTPEGCSS 255
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
L +HK D + T +V K+L + G LIGK+G +K +++
Sbjct: 256 ACKMILEIMHKEAKD----------TKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQD 305
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRS 302
+ + + +DL ++ +R + V G +A + I +R+ +
Sbjct: 306 TETKITISSLQDLTLY--NPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH 363
Query: 303 IIP--------LFEM--------------------HMQMPNPQMDHIPPPQSWGPPQGLP 334
+IP LF MQ P +M Q + P Q +
Sbjct: 364 LIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYGSFMQAPEQEM-----VQVFIPAQAVG 418
Query: 335 PSGGPGYGHNPQY---------MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVN 385
G H Q + PP +S + P E Q YG+ N
Sbjct: 419 AIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEEN 478
Query: 386 VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGV 443
G P ++ +++P S A VIG G +++ ++ + A V + +T
Sbjct: 479 FFG-------PKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDE 531
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I G Q AQ+ I++ +A+
Sbjct: 532 NDQVIVKIIGHFYASQMAQRKIRDILAQ 559
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE---RAVMISAKE 183
P + + ++ +PAQ VG+IIG+KG+ IK++ A IKI PP T + R V+I+
Sbjct: 403 PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI--APPETPDSKVRMVVITG-- 458
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PP + + RI L ++ P K+ T + VPAS AG +IGK G T
Sbjct: 459 ------PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 244 VKSIQEAS 251
V +Q +
Sbjct: 510 VNELQNLT 517
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 152/388 (39%), Gaps = 74/388 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G I+ I ++T+++I + G E+A IS PE
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKA--ISVHSTPEGCSS 255
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
L +HK D + T +V K+L + G LIGK+G +K +++
Sbjct: 256 ACKMILEIMHKEAKD----------TKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQD 305
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRS 302
+ + + +DL ++ +R + V G +A + I +R+ +
Sbjct: 306 TETKITISSLQDLTLY--NPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH 363
Query: 303 IIP--------LFEM--------------------HMQMPNPQMDHIPPPQSWGPPQGLP 334
+IP LF MQ P +M Q + P Q +
Sbjct: 364 LIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEM-----VQVFIPAQAVG 418
Query: 335 PSGGPGYGHNPQY---------MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVN 385
G H Q + PP +S + P E Q YG+ N
Sbjct: 419 AIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEEN 478
Query: 386 VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGV 443
G P ++ +++P S A VIG G +++ ++ + A V + +T
Sbjct: 479 FFG-------PKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDE 531
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I G Q AQ+ I++ +A+
Sbjct: 532 NDQVIVKIIGHFYASQMAQRKIRDILAQ 559
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE---RAVMISAKE 183
P + + ++ +PAQ VG+IIG+KG+ IK++ A IKI PP T + R V+I+
Sbjct: 403 PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI--APPETPDSKVRMVIITG-- 458
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PP + + RI L ++ P K+ T + VPAS AG +IGK G T
Sbjct: 459 ------PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 244 VKSIQEAS 251
V +Q +
Sbjct: 510 VNELQNLT 517
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 11/163 (6%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I KI +++ +++I G ER+V ++ E +D
Sbjct: 215 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAVQKAKLMLDD 274
Query: 196 LLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIV 255
++ + G D ++ +GT ++++PA +AG +IGK G T+K +QE + +
Sbjct: 275 IVSRGRGGPPGQFHDYANGQNGT----VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKM 330
Query: 256 RVL--GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
+ G+++ V D+ + ++GD V +A E++ LR+
Sbjct: 331 IFIQDGSQNTNV-----DKPLRIIGDPYKVQQACEMVMDILRE 368
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 396 PSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTA 455
P T VT++ ++P +IG G I+ I++ SG V I G E +V ++G+
Sbjct: 203 PPRSTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSP 262
Query: 456 SQVQTAQQLIQNFMAEA 472
VQ A+ ++ + ++
Sbjct: 263 EAVQKAKLMLDDIVSRG 279
Score = 36.6 bits (83), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGTT--ERAVMISAKEEPE 186
+V +++PA K G +IG+ GE IK++ E + I I DG T + +I + +
Sbjct: 297 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDGSQNTNVDKPLRIIGDPYKVQ 356
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ MD +LR + G D + S GG + + VP G +IG+ G +K
Sbjct: 357 QACEMVMD-ILRERDQ---GGFGDRNEYGSRIGGGID--VPVPRHSVGVVIGRSGEMIKK 410
Query: 247 IQEASNCIVRVLGAED 262
IQ ++ VR+ +D
Sbjct: 411 IQ--NDAGVRIQFKQD 424
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 50/135 (37%), Gaps = 17/135 (12%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKI-------------LDGPPGTTERAVMISAK 182
VP VG +IGR GE IKKI + RI+ + GPP E A I
Sbjct: 392 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPERCEHAARII-- 449
Query: 183 EEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGG 242
+ SL G GG+++ +P + G +IG+ G
Sbjct: 450 NDLLQSLRSGPPGPPGHGMPPGGRGRGRGQGIWGPPGGEMT--FSIPTHKCGLVIGRGGE 507
Query: 243 TVKSIQEASNCIVRV 257
VK+I + V +
Sbjct: 508 NVKAINQQRGAFVEI 522
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 152/388 (39%), Gaps = 74/388 (19%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G I+ I ++T+++I + G E+A IS PE
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKA--ISVHSTPEGCSS 255
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
L +HK D + T +V K+L + G LIGK+G +K +++
Sbjct: 256 ACKMILEIMHKEAKD----------TKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQD 305
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK--------FLVDRS 302
+ + + +DL ++ +R + V G +A + I +R+ +
Sbjct: 306 TETKITISSLQDLTLY--NPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH 363
Query: 303 IIP--------LFEM--------------------HMQMPNPQMDHIPPPQSWGPPQGLP 334
+IP LF MQ P +M Q + P Q +
Sbjct: 364 LIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEM-----VQVFIPAQAVG 418
Query: 335 PSGGPGYGHNPQY---------MPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAPVN 385
G H Q + PP +S + P E Q YG+ N
Sbjct: 419 AIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEEN 478
Query: 386 VHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGV 443
G P ++ +++P S A VIG G +++ ++ + A V + +T
Sbjct: 479 FFG-------PKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDE 531
Query: 444 PGEMTVEISGTASQVQTAQQLIQNFMAE 471
++ V+I G Q AQ+ I++ +A+
Sbjct: 532 NDQVIVKIIGHFYASQMAQRKIRDILAQ 559
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTE---RAVMISAKE 183
P + + ++ +PAQ VG+IIG+KG+ IK++ A IKI PP T + R V+I+
Sbjct: 403 PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI--APPETPDSKVRMVVITG-- 458
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PP + + RI L ++ P K+ T + VPAS AG +IGK G T
Sbjct: 459 ------PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 244 VKSIQEAS 251
V +Q +
Sbjct: 510 VNELQNLT 517
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 26/171 (15%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I KI +++ +++I G ER+V ++ PES
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGA--PES-------- 201
Query: 196 LLRVHKRIVDGLDSDSSHAPSG------TGGKVST--KLLVPASQAGSLIGKQGGTVKSI 247
++ K ++D + S P G GG+ T ++++PA +AG +IGK G T+K +
Sbjct: 202 -VQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQL 260
Query: 248 QEASNCIVRVL--GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
QE + + ++ G+++ V D+ + ++GD V +A E++ LR+
Sbjct: 261 QERAGVKMILIQDGSQNTNV-----DKPLRIIGDPYKVQQACEMVMDILRE 306
Score = 39.3 bits (90), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 400 TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
T +T++ ++P +IG G I+ I++ SG V I G E +V ++G VQ
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 203
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYN 489
A+ ++ + ++ Q +A+ G N
Sbjct: 204 KAKMMLDDIVSRGRGGPPGQFHDNANGGQN 233
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 17/206 (8%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGTT--ERAVMISAKEEPE 186
+V +++PA K G +IG+ GE IK++ E + I I DG T + +I + +
Sbjct: 235 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQ 294
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ MD +LR + G D + S GG + + VP G +IG+ G +K
Sbjct: 295 QACEMVMD-ILRERDQ---GGFGDRNEYGSRVGGGID--VPVPRHSVGVVIGRSGEMIKK 348
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
IQ ++ VR+ +D +++ ++G A +I L+ RS P
Sbjct: 349 IQ--NDAGVRIQFKQDD---GTGPEKIAHIMGPPDRCEHAARIINDLLQSL---RSGPPG 400
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQG 332
MP +WGPP G
Sbjct: 401 PPGAPGMPPGGRGRGRGQGNWGPPGG 426
Score = 36.6 bits (83), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 20/169 (11%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKI-------------LDGPPGTTERAV-MISA 181
VP VG +IGR GE IKKI + RI+ + GPP E A +I+
Sbjct: 330 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIIND 389
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
+ S PP G + + P GG+++ +P + G +IG+ G
Sbjct: 390 LLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPP--GGEMT--FSIPTHKCGLVIGRGG 445
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
VK+I + + V + + LP + ++ + G + A +LI
Sbjct: 446 ENVKAINQQTGAFVEI--SRQLPPNGDPNFKLFVIRGSPQQIDHAKQLI 492
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 26/171 (15%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I KI +++ +++I G ER+V ++ PES
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTG--APES-------- 201
Query: 196 LLRVHKRIVDGLDSDSSHAPSG------TGGKVST--KLLVPASQAGSLIGKQGGTVKSI 247
++ K ++D + S P G GG+ T ++++PA +AG +IGK G T+K +
Sbjct: 202 -VQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQL 260
Query: 248 QEASNCIVRVL--GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
QE + + ++ G+++ V D+ + ++GD V +A E++ LR+
Sbjct: 261 QERAGVKMILIQDGSQNTNV-----DKPLRIIGDPYKVQQACEMVMDILRE 306
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 400 TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
T +T++ ++P +IG G I+ I++ SG V I G E +V ++G VQ
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 203
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYN 489
A+ ++ + ++ Q +A+ G N
Sbjct: 204 KAKMMLDDIVSRGRGGPPGQFHDNANGGQN 233
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 17/206 (8%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGTT--ERAVMISAKEEPE 186
+V +++PA K G +IG+ GE IK++ E + I I DG T + +I + +
Sbjct: 235 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQ 294
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ MD +LR + G D + S GG + + VP G +IG+ G +K
Sbjct: 295 QACEMVMD-ILRERDQ---GGFGDRNEYGSRVGGGID--VPVPRHSVGVVIGRSGEMIKK 348
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
IQ + VR+ +D +++ ++G A +I L+ RS P
Sbjct: 349 IQNDAG--VRIQFKQDD---GTGPEKIAHIMGPPDRCEHAARIINDLLQSL---RSGPPG 400
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQG 332
MP +WGPP G
Sbjct: 401 PPGAPGMPPGGRGRGRGQGNWGPPGG 426
Score = 36.6 bits (83), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 20/169 (11%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKI-------------LDGPPGTTERAV-MISA 181
VP VG +IGR GE IKKI + RI+ + GPP E A +I+
Sbjct: 330 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIIND 389
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
+ S PP G + + P GG+++ +P + G +IG+ G
Sbjct: 390 LLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPP--GGEMT--FSIPTHKCGLVIGRGG 445
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
VK+I + + V + + LP + ++ + G + A +LI
Sbjct: 446 ENVKAINQQTGAFVEI--SRQLPPNGDPNFKLFVIRGSPQQIDHAKQLI 492
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 26/171 (15%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDG 195
VP VG IIGR GE I KI +++ +++I G ER+V ++ PES
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTG--APES-------- 200
Query: 196 LLRVHKRIVDGLDSDSSHAPSG------TGGKVST--KLLVPASQAGSLIGKQGGTVKSI 247
++ K ++D + S P G GG+ T ++++PA +AG +IGK G T+K +
Sbjct: 201 -VQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQL 259
Query: 248 QEASNCIVRVL--GAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRK 296
QE + + ++ G+++ V D+ + ++GD V +A E++ LR+
Sbjct: 260 QERAGVKMILIQDGSQNTNV-----DKPLRIIGDPYKVQQACEMVMDILRE 305
Score = 39.3 bits (90), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 400 TQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQ 459
T +T++ ++P +IG G I+ I++ SG V I G E +V ++G VQ
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 202
Query: 460 TAQQLIQNFMAEAAAPSQAQMGASADQGYN 489
A+ ++ + ++ Q +A+ G N
Sbjct: 203 KAKMMLDDIVSRGRGGPPGQFHDNANGGQN 232
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 17/206 (8%)
Query: 130 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRAR-IKILDGPPGTT--ERAVMISAKEEPE 186
+V +++PA K G +IG+ GE IK++ E + I I DG T + +I + +
Sbjct: 234 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQ 293
Query: 187 SSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKS 246
+ MD +LR + G D + S GG + + VP G +IG+ G +K
Sbjct: 294 QACEMVMD-ILRERDQ---GGFGDRNEYGSRIGGGID--VPVPRHSVGVVIGRSGEMIKK 347
Query: 247 IQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPL 306
IQ ++ VR+ +D +++ ++G A +I L+ RS P
Sbjct: 348 IQ--NDAGVRIQFKQDD---GTGPEKIAHIMGPPDRCEHAARIINDLLQSL---RSGPPG 399
Query: 307 FEMHMQMPNPQMDHIPPPQSWGPPQG 332
MP +WGPP G
Sbjct: 400 PPGGPGMPPGGRGRGRGQGNWGPPGG 425
Score = 36.2 bits (82), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 20/169 (11%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKI-------------LDGPPGTTERAV-MISA 181
VP VG +IGR GE IKKI + RI+ + GPP E A +I+
Sbjct: 329 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIIND 388
Query: 182 KEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQG 241
+ S PP G + + P GG+++ +P + G +IG+ G
Sbjct: 389 LLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPP--GGEMT--FSIPTHKCGLVIGRGG 444
Query: 242 GTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELI 290
VK+I + + V + + LP + ++ + G + A +LI
Sbjct: 445 ENVKAINQQTGAFVEI--SRQLPPNGDPNFKLFIIRGSPQQIDHAKQLI 491
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 152/374 (40%), Gaps = 49/374 (13%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTER 175
G+++ + +P R+LVP Q VG+IIG++G IK I ++T++R+ I G E+
Sbjct: 185 GTSQARQIDFP----LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEK 240
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
V I A E S A +L + ++ D + ++ K+L G
Sbjct: 241 PVTIHATPEGTSE---ACRMILEIMQKEAD---------ETKLAEEIPLKILAHNGLVGR 288
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGK+G +K I+ + + + +DL ++ +R + V G A I LR
Sbjct: 289 LIGKEGRNLKKIEHETGTKITISSLQDLSIY--NPERTITVKGTVEACASAEIEIMKKLR 346
Query: 296 KFLVDRSII---------PLFEMHMQMPNPQMDHIPPPQS----WGPPQGLPPSGGPGYG 342
+ + + L+ H P P H P Q + P Q + G
Sbjct: 347 EAFENDMLAVNTHSGYFSSLYPHHQFGPFPH-HHSYPEQEIVNLFIPTQAVGAIIGKKGA 405
Query: 343 HNPQYMPPPRQAESYYPPADLPPPMEKQ------PHQGISAYGREAPVNVHGSSNAQS-- 394
H Q + A PA+ P E+ P A GR + G ++
Sbjct: 406 HIKQ-LARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGR-----IFGKLKEENFF 459
Query: 395 TPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTI--QETRGVPGEMTVEIS 452
P ++ +++P S A VIG G +++ ++ + A V + +T E+ V I
Sbjct: 460 NPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRII 519
Query: 453 GTASQVQTAQQLIQ 466
G QTAQ+ I+
Sbjct: 520 GHFFASQTAQRKIR 533
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 71/329 (21%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
R+LVP Q VG+IIG++G I+ I ++T ++I I G E+ + + + E SS
Sbjct: 197 LRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGCSS-- 254
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
A ++ + ++ + +D+ + ++ K+L + G LIGK+G +K I++
Sbjct: 255 -ACRNIMEIMQK--EAIDTKITE-------EIPLKILAHNNFVGRLIGKEGRNLKKIEQD 304
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMH 310
++ + + +DL ++ +R + V G KA E I +R+ + + MH
Sbjct: 305 TDTKITISPLQDLTLY--NPERTITVKGTLDACAKAEEEIMKKVRESYEN----DVAAMH 358
Query: 311 MQ---MPNPQMDHIPPPQSWGPPQGLPPSGGPGYGHNPQYM--PPPRQAESYYPPADLPP 365
+Q +P ++ + GL P G G +P + PPP Y
Sbjct: 359 LQSNLIPGLNLNAL----------GLFPGAASG-GISPSVVSGPPPGAQAGY-------- 399
Query: 366 PMEKQPHQGISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASIS 425
QS + + T + IP A+IG G I
Sbjct: 400 ---------------------------QSFGAQMESETVHLFIPALAVGAIIGKQGQHIK 432
Query: 426 YIRRSSGATVTIQETRGVPG-EMTVEISG 453
+ R +GA++ I G+ + V ISG
Sbjct: 433 QLSRFAGASIKIAPADGIDAKQRMVIISG 461
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPPGTTERAVMISAKEEPESSLPP 191
+ +PA VG+IIG++G+ IK++ A IKI DG +R V+IS PP
Sbjct: 413 LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDA-KQRMVIISG--------PP 463
Query: 192 AMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 251
+ + RI L ++ P K+ + VP+ AG +IGK G TV +Q +
Sbjct: 464 --EAQFKAQGRIFGKLKEENFFGPK-EEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLT 520
Query: 252 NCIVRV 257
+ V V
Sbjct: 521 SAEVVV 526
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 117 GSTEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTER 175
G+++ + +P R+LVP Q VG+IIG++G IK I ++T++R+ I G E+
Sbjct: 185 GTSQARQIDFP----LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEK 240
Query: 176 AVMISAKEEPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGS 235
V I A E S A +L + ++ D + ++ K+L G
Sbjct: 241 PVTIHATPEGTSE---ACRMILEIMQKEAD---------ETKLAEEIPLKILAHNGLVGR 288
Query: 236 LIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
LIGK+G +K I+ + + + +DL ++ +R + V G A I LR
Sbjct: 289 LIGKEGRNLKKIEHETGTKITISSLQDLSIY--NPERTITVKGTVEACASAEIEIMKKLR 346
Query: 296 KFLVDRSIIPLFEMHMQMPNPQMDHIP 322
+ FE M N Q + IP
Sbjct: 347 E---------AFENDMLAVNQQANLIP 364
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 126 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGP-PGTTERAVMISAKEE 184
+P + + + +P Q VG+IIG+KG IK++ A IKI P +ER V+I+
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG--- 480
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+S AG +IGK G TV
Sbjct: 481 -----PP--EAQFKAQGRIFGKLKEENFFNPKEEV-KLEAHIRVPSSTAGRVIGKGGKTV 532
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 533 NELQNLTSAEVIV 545
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
RMLVP Q VG+IIG++G I+ I ++T+++I I G E+ + I S P
Sbjct: 207 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITI-------HSTP 259
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
++ I+ D+ ++ K+L + G LIGK+G +K I++
Sbjct: 260 EGCSAACKIIMEIMQKEAQDTKFTE-----EIPLKILAHNNFVGRLIGKEGRNLKKIEQD 314
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
++ + + +DL ++ +R + V G KA E + +R
Sbjct: 315 TDTKITISPLQDLTLY--NPERTITVKGSIETCAKAEEEVMKKIR 357
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPPGTTERAVMISAKEE 184
P + +PA VG+IIG++G+ IK++ A IKI +GP R V+I+
Sbjct: 415 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKL-RMVIITG--- 470
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+ AG +IGK G TV
Sbjct: 471 -----PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLEAHIKVPSYAAGRVIGKGGKTV 522
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 523 NELQNLTSAEVVV 535
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 374 GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGA 433
G +G+ P GS A + P ++V +M +P + A+IG GA+I I + + +
Sbjct: 178 GRRGFGQRGPAR-QGSPGAAARPKPQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQS 236
Query: 434 TVTIQETRGV-PGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
+ I E + I T A ++I M + A
Sbjct: 237 KIDIHRKENAGAAEKPITIHSTPEGCSAACKIIMEIMQKEA 277
Score = 32.3 bits (72), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 50/175 (28%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-------LDGPPGT------------ 172
++L VG +IG++G +KKI ++T +I I L P T
Sbjct: 288 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIETCAK 347
Query: 173 TERAVMISAKEEPESSLPPAMDGLLRVHKRIVDGLD------------------------ 208
E VM +E E+ + AM+ L+ H ++ GL+
Sbjct: 348 AEEEVMKKIRESYENDIA-AMN--LQAH--LIPGLNLNALGLFPPSSSGMPPPSAGVSSP 402
Query: 209 -SDSSHAPSGTGGKVST-KLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE 261
+ +S+ P G + T L +PA G++IGKQG +K + + +++ AE
Sbjct: 403 TTSASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAE 457
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
RMLVP Q VG+IIG++G I+ I ++T+++I I G E+ + I S P
Sbjct: 208 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITI-------HSTP 260
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
++ I+ D+ ++ K+L + G LIGK+G +K I++
Sbjct: 261 EGCSAACKIIMEIMQKEAQDTKFTE-----EIPLKILAHNNFVGRLIGKEGRNLKKIEQD 315
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
++ + + +DL ++ +R + V G KA E I +R
Sbjct: 316 TDTKITISPLQDLTLY--NPERTITVKGSIEPCAKAEEEIMKKIR 358
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPPGTTERAVMISAKEE 184
P + +PA VG+IIG++G+ IK++ A IKI +GP R V+I+
Sbjct: 416 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKL-RMVIITG--- 471
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ T + VP+ AG +IGK G TV
Sbjct: 472 -----PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLETHIKVPSYAAGRVIGKGGKTV 523
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 524 NELQNLTSAEVVV 536
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 374 GISAYGREAPVNVHGSSNAQSTPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRSSGA 433
G +G+ P GS A + P T+V +M +P + A+IG GA+I I + + +
Sbjct: 179 GRRGFGQRGPAR-QGSPGAAARPKPQTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQS 237
Query: 434 TVTIQETRGV-PGEMTVEISGTASQVQTAQQLIQNFMAEAA 473
+ I E + I T A ++I M + A
Sbjct: 238 KIDIHRKENAGAAEKPITIHSTPEGCSAACKIIMEIMQKEA 278
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPES--SL 189
R+LVP Q VG+IIG++G I+ I ++T+++I + R A E+P S S
Sbjct: 201 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HRKENAGAAEKPISIHST 252
Query: 190 PPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
P R+ I++ D+ T +V K+L + G LIGK+G +K +++
Sbjct: 253 PEGCSAACRMILEIMNQEAKDTK-----TADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQ 307
Query: 250 ASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
++ + + +DL ++ +R + V G A + I +R
Sbjct: 308 DTDTKITISPLQDLTLY--NPERTITVKGSIEACCLAEQEIMKKVR 351
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 125 GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKE 183
G + + +PAQ VG++IG+KG+ IK++ A IKI P + R V+++
Sbjct: 403 GASEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTG-- 460
Query: 184 EPESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGT 243
PP + + RI L ++ P K+ T + V A+ AG +IGK G T
Sbjct: 461 ------PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLETHIKVAAAAAGRVIGKGGKT 511
Query: 244 VKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSI 303
V +Q + V V+ E P D +V+++G A I R I
Sbjct: 512 VNELQNLTAAEV-VVPREQTP--DEHDQVIVKIIGHFYASQLAQRKI----------RDI 558
Query: 304 IPLFEMHMQ---MPNPQMDHIPPPQSWGPPQGL 333
+ + + M PQ H G PQGL
Sbjct: 559 LTQVKQQQKGGGMGTPQGPHPQGMTELGSPQGL 591
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEPESSLP 190
RMLVP Q VG+IIG++G I+ I ++T+++I I G E+ + I S P
Sbjct: 199 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITI-------HSTP 251
Query: 191 PAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEA 250
++ I+ D+ ++ K+L + G LIGK+G +K I++
Sbjct: 252 EGCSTACKIIMEIMQKEAQDTKFTE-----EIPLKILAHNNFVGRLIGKEGRNLKKIEQD 306
Query: 251 SNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
++ + + +DL ++ +R + V G KA E I +R
Sbjct: 307 TDTKITISPLQDLTLY--NPERTITVKGSIETCAKAEEEIMKKIR 349
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI--LDGPPGTTERAVMISAKEE 184
P + +PA VG+IIG++G+ IK++ A IKI +GP R V+I+
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKL-RMVIITG--- 462
Query: 185 PESSLPPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
PP + + RI L ++ P K+ + VP+ AG +IGK G TV
Sbjct: 463 -----PP--EAQFKAQGRIYGKLKEENFFGPK-EEVKLEAHIKVPSYAAGRVIGKGGKTV 514
Query: 245 KSIQEASNCIVRV 257
+Q ++ V V
Sbjct: 515 NELQNLTSAEVVV 527
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI-LDGPPGTTERAVMISAKEEP 185
P + R+LVP Q VG+IIG++G I+ I ++T+++I + G E+++ I + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 186 ESSLPPAMDGLLRV-HKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTV 244
S+ A +L + HK D ++ ++ K+L + G LIGK+G +
Sbjct: 253 TSA---ACKSILEIMHKEAQDIKFTE----------EIPLKILAHNNFVGRLIGKEGRNL 299
Query: 245 KSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDASGVHKAMELIGSHLR 295
K I++ ++ + + ++L ++ +R + V G KA E I +R
Sbjct: 300 KKIEQDTDTKITISPLQELTLY--NPERTITVKGSVETCAKAEEEIMKKIR 348
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 134 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDG-PPGTTERAVMISAKEEPESSLPPA 192
+ +PA VG+IIG++G+ IK++ A IKI P R V+I+ PP
Sbjct: 410 LFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITG--------PP- 460
Query: 193 MDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASN 252
+ + RI + ++ +P K+ + VP+ AG +IGK G TV +Q S+
Sbjct: 461 -EAQFKAQGRIYGKIKEENFVSPK-EEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSS 518
Query: 253 CIVRV 257
V V
Sbjct: 519 AEVVV 523
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T Q+ IP A ++IG G I IR SGA++ I E + + I+GT Q+Q A
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 462 QQLIQNFMAEAA 473
Q L+QN + + A
Sbjct: 448 QYLLQNSVKQYA 459
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD--GPPGTTERAVMISAKEEP---- 185
R+L+ ++ G++IG+ G+ IK + + A + + D GP ER + ISA E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP----ERILSISADIETIGEI 100
Query: 186 -ESSLPPAMDGL----------LRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
+ +P +GL L + V+ L+ G+ +LL+ S AG
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNY---QHYKGSDFDCELRLLIHQSLAG 157
Query: 235 SLIGKQGGTVKSIQEASNCIVRVL------GAEDLPVFALQDDRVVEVV 277
+IG +G +K ++E + +++ + + + + DRVVE +
Sbjct: 158 GIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
++T++ +P AGS+IGK G +K I+ S +++ D P+ +DR++ + G
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQD 442
Query: 282 GVHKAMELIGSHLRKF 297
+ A L+ + ++++
Sbjct: 443 QIQNAQYLLQNSVKQY 458
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
V ++L+ + AG++IGK G +K+++ N V V + +R++ + D
Sbjct: 43 VELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSG-------PERILSISAD-- 93
Query: 282 GVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNP 316
+E IG L+K IIP E +Q+P+P
Sbjct: 94 -----IETIGEILKK------IIPTLEEGLQLPSP 117
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
+P GSIIG+ G+ IK+I E+ A IKI + G+ +R + I+ ++
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T Q+ IP A ++IG G I IR SGA++ I E + + I+GT Q+Q A
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 462 QQLIQNFMAEAA 473
Q L+QN + + A
Sbjct: 448 QYLLQNSVKQYA 459
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD--GPPGTTERAVMISAKEEP---- 185
R+L+ ++ G++IG+ G+ IK + + A + + D GP ER + ISA E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP----ERILSISADIETIGEI 100
Query: 186 -ESSLPPAMDGL----------LRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
+ +P +GL L + V+ L+ G+ +LL+ S AG
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNY---QHYKGSDFDCELRLLIHQSLAG 157
Query: 235 SLIGKQGGTVKSIQEASNCIVRVL------GAEDLPVFALQDDRVVEVV 277
+IG +G +K ++E + +++ + + + + DRVVE +
Sbjct: 158 GIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
++T++ +P AGS+IGK G +K I+ S +++ D P+ +DR++ + G
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQD 442
Query: 282 GVHKAMELIGSHLRKF 297
+ A L+ + ++++
Sbjct: 443 QIQNAQYLLQNSVKQY 458
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
V ++L+ + AG++IGK G +K+++ N V V + +R++ + D
Sbjct: 43 VELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSG-------PERILSISAD-- 93
Query: 282 GVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNP 316
+E IG L+K IIP E +Q+P+P
Sbjct: 94 -----IETIGEILKK------IIPTLEEGLQLPSP 117
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
+P GSIIG+ G+ IK+I E+ A IKI + G+ +R + I+ ++
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T Q+ IP A ++IG G I IR SGA++ I E + + I+GT Q+Q A
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 462 QQLIQNFMAEAA 473
Q L+QN + + A
Sbjct: 448 QYLLQNSVKQYA 459
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD--GPPGTTERAVMISAKEEP---- 185
R+L+ ++ G++IG+ G+ IK + + A + + D GP ER + ISA E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP----ERILSISADIETIGEI 100
Query: 186 -ESSLPPAMDGL----------LRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
+ +P +GL L + V+ L+ G+ +LL+ S AG
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNY---QHYKGSDFDCELRLLIHQSLAG 157
Query: 235 SLIGKQGGTVKSIQEASNCIVRVL------GAEDLPVFALQDDRVVEVV 277
+IG +G +K ++E + +++ + + + + DRVVE +
Sbjct: 158 GIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECI 206
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
++T++ +P AGS+IGK G +K I+ S +++ D P+ +DR++ + G
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQD 442
Query: 282 GVHKAMELIGSHLRKF 297
+ A L+ + ++++
Sbjct: 443 QIQNAQYLLQNSVKQY 458
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
V ++L+ + AG++IGK G +K+++ N V V + +R++ + D
Sbjct: 43 VELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSG-------PERILSISAD-- 93
Query: 282 GVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNP 316
+E IG L+K IIP E +Q+P+P
Sbjct: 94 -----IETIGEILKK------IIPTLEEGLQLPSP 117
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
+P GSIIG+ G+ IK+I E+ A IKI + G+ +R + I+ ++
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T Q+ IP A ++IG G I IR SGA++ I E + + I+GT Q+Q A
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 411
Query: 462 QQLIQN 467
Q L+QN
Sbjct: 412 QYLLQN 417
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD--GPPGTTERAVMISAKEEPESSL 189
R+L+ ++ G++IG+ G+ IK + + A + + D GP ER + ISA E
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP----ERILSISADTET---- 93
Query: 190 PPAMDGLLRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQE 249
+ + K+I+ L+ + G+ +LL+ S AG +IG +G +K ++E
Sbjct: 94 ------IGEILKKIIPTLEEYQHY--KGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRE 145
Query: 250 ASNCIVRVL------GAEDLPVFALQDDRVVEVV 277
+ +++ + + + + DRVVE +
Sbjct: 146 NTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 179
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 123 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTTERAVMISA 181
+ G + R+L+ G IIG KG IK++ E T+ IK+ + P +T+R V+I
Sbjct: 111 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGG 170
Query: 182 K 182
K
Sbjct: 171 K 171
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
++T++ +P AGS+IGK G +K I+ S +++ D P+ +DR++ + G
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQD 406
Query: 282 GVHKAMELIGSHLRKF 297
+ A L+ + ++++
Sbjct: 407 QIQNAQYLLQNSVKQY 422
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
+P GSIIG+ G+ IK+I E+ A IKI + G+ +R + I+ ++
Sbjct: 358 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 406
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T Q+ IP A ++IG G I IR SGA++ I E + + I+GT Q+Q A
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 462 QQLIQN 467
Q L+QN
Sbjct: 448 QYLLQN 453
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD--GPPGTTERAVMISAKEEP---- 185
R+L+ ++ G++IG+ G+ IK + + A + + D GP ER + ISA E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP----ERILSISADIETIGEI 100
Query: 186 -ESSLPPAMDGL----------LRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
+ +P +GL L + V+ L+ G+ +LL+ S AG
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNY---QHFKGSDFDCELRLLIHQSLAG 157
Query: 235 SLIGKQGGTVKSIQEASNCIVRVL------GAEDLPVFALQDDRVVEVV 277
+IG +G +K ++E + +++ + + + + DRVVE +
Sbjct: 158 GIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
++T++ +P AGS+IGK G +K I+ S +++ D P+ +DR++ + G
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQD 442
Query: 282 GVHKAMELIGSHLRKF 297
+ A L+ + ++++
Sbjct: 443 QIQNAQYLLQNSVKQY 458
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
V ++L+ + AG++IGK G +K+++ N V V + +R++ + D
Sbjct: 43 VELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSG-------PERILSISAD-- 93
Query: 282 GVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNP 316
+E IG L+K IIP E +Q+P+P
Sbjct: 94 -----IETIGEILKK------IIPTLEEGLQLPSP 117
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
+P GSIIG+ G+ IK+I E+ A IKI + G+ +R + I+ ++
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T Q+ IP A ++IG G I IR SGA++ I E + + I+GT Q+Q A
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 462 QQLIQN 467
Q L+QN
Sbjct: 448 QYLLQN 453
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD--GPPGTTERAVMISAKEEP---- 185
R+L+ ++ G++IG+ G+ IK + + A + + D GP ER + ISA E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP----ERILSISADIETIGEI 100
Query: 186 -ESSLPPAMDGL----------LRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
+ +P +GL L + V+ L+ G+ +LL+ S AG
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNY---QHYKGSDFDCELRLLIHQSLAG 157
Query: 235 SLIGKQGGTVKSIQEASNCIVRVL------GAEDLPVFALQDDRVVEVV 277
+IG +G +K ++E + +++ + + + + DRVVE +
Sbjct: 158 GIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
++T++ +P AGS+IGK G +K I+ S +++ D P+ +DR++ + G
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQD 442
Query: 282 GVHKAMELIGSHLRKF 297
+ A L+ + ++++
Sbjct: 443 QIQNAQYLLQNSVKQY 458
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
V ++L+ + AG++IGK G +K+++ N V V + +R++ + D
Sbjct: 43 VELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSG-------PERILSISAD-- 93
Query: 282 GVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNP 316
+E IG L+K IIP E +Q+P+P
Sbjct: 94 -----IETIGEILKK------IIPTLEEGLQLPSP 117
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
+P GSIIG+ G+ IK+I E+ A IKI + G+ +R + I+ ++
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T Q+ IP A ++IG G I IR SGA++ I E + + I+GT Q+Q A
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 462 QQLIQN 467
Q L+QN
Sbjct: 448 QYLLQN 453
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD--GPPGTTERAVMISAKEEP---- 185
R+L+ ++ G++IG+ G+ IK + + A + + D GP ER + ISA E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP----ERILSISADIETIGEI 100
Query: 186 -ESSLPPAMDGL----------LRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
+ +P +GL L + V+ L+ G+ +LL+ S AG
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNY---QHYKGSDFDCELRLLIHQSLAG 157
Query: 235 SLIGKQGGTVKSIQEASNCIVRVL------GAEDLPVFALQDDRVVEVV 277
+IG +G +K ++E + +++ + + + + DRVVE +
Sbjct: 158 GIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
++T++ +P AGS+IGK G +K I+ S +++ D P+ +DR++ + G
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQD 442
Query: 282 GVHKAMELIGSHLRKF 297
+ A L+ + ++++
Sbjct: 443 QIQNAQYLLQNSVKQY 458
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
V ++L+ + AG++IGK G +K+++ N V V + +R++ + D
Sbjct: 43 VELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSG-------PERILSISAD-- 93
Query: 282 GVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNP 316
+E IG L+K IIP E +Q+P+P
Sbjct: 94 -----IETIGEILKK------IIPTLEEGLQLPSP 117
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
+P GSIIG+ G+ IK+I E+ A IKI + G+ +R + I+ ++
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 402 VTQQMQIPLSYADAVIGTAGASISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTA 461
+T Q+ IP A ++IG G I IR SGA++ I E + + I+GT Q+Q A
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 462 QQLIQN 467
Q L+QN
Sbjct: 448 QYLLQN 453
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD--GPPGTTERAVMISAKEEP---- 185
R+L+ ++ G++IG+ G+ IK + + A + + D GP ER + ISA E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP----ERILSISADIETIGEI 100
Query: 186 -ESSLPPAMDGL----------LRVHKRIVDGLDSDSSHAPSGTGGKVSTKLLVPASQAG 234
+ +P +GL L + V+ L+ G+ +LL+ S AG
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNY---QHYKGSDFDCELRLLIHQSLAG 157
Query: 235 SLIGKQGGTVKSIQEASNCIVRVL------GAEDLPVFALQDDRVVEVV 277
+IG +G +K ++E + +++ + + + + DRVVE +
Sbjct: 158 GIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
++T++ +P AGS+IGK G +K I+ S +++ D P+ +DR++ + G
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQD 442
Query: 282 GVHKAMELIGSHLRKF 297
+ A L+ + ++++
Sbjct: 443 QIQNAQYLLQNSVKQY 458
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 222 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDAS 281
V ++L+ + AG++IGK G +K+++ N V V + +R++ + D
Sbjct: 43 VELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSG-------PERILSISAD-- 93
Query: 282 GVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNP 316
+E IG L+K IIP E +Q+P+P
Sbjct: 94 -----IETIGEILKK------IIPTLEEGLQLPSP 117
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 136 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEE 184
+P GSIIG+ G+ IK+I E+ A IKI + G+ +R + I+ ++
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|Q9BXM0|PRAX_HUMAN Periaxin OS=Homo sapiens GN=PRX PE=1 SV=2
Length = 1461
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 9/96 (9%)
Query: 19 QIPENQEVENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTKEQVTEDQLTEDQVPEDHV 78
++PE EV VP +PE ++P+VP+ +VP+ ++P +V + ++ E +L E Q+P V
Sbjct: 555 KLPEVSEV--AVPEVRLPEVQLPKVPEMKVPEMKLP--KVPEMKLPEMKLPEVQLP--KV 608
Query: 79 PEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNL 114
PE VP+ H+PE Q+P+ VPE +L E + EV L
Sbjct: 609 PEMAVPDVHLPEVQLPK--VPE-MKLPEMKLPEVKL 641
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 27 ENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTKEQVTEDQLTEDQVPE---DHVPEDQV 83
E ++P ++PE ++P+VP+ VP +PE Q+ K V E +L E ++PE VPE V
Sbjct: 592 EMKLPEMKLPEVQLPKVPEMAVPDVHLPEVQLPK--VPEMKLPEMKLPEVKLPKVPEMAV 649
Query: 84 PEDHVPEDQVPEDIVPE 100
P+ H+PE Q+P+ VPE
Sbjct: 650 PDVHLPEVQLPK--VPE 664
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 9/94 (9%)
Query: 14 NHDLEQIPENQEVENQVPGYEVP---EYEVPEVPQEQVPQEQVPESQVTKEQVTEDQLTE 70
L ++PE E ++P E+P E ++P+VP+ VP+ ++PE Q+ K V+E +L
Sbjct: 475 EMKLPKVPEMAVPEVRLPEVELPKVSEMKLPKVPEMAVPEVRLPEVQLLK--VSEMKL-- 530
Query: 71 DQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQL 104
+VPE VPE ++PE +P +V E +PE S++
Sbjct: 531 PKVPEMAVPEVRLPEVQLP--KVSEMKLPEVSEV 562
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
Query: 26 VENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTKEQVTEDQLTEDQVPEDHVPEDQVPE 85
E +VP ++PE ++P+VP+ VP +PE Q+ K V+E +L E QVP +VP+
Sbjct: 715 CEMKVPDMKLPEIKLPKVPEMAVPDVHLPEVQLPK--VSEIRLPEMQVP-------KVPD 765
Query: 86 DHVPEDQVPEDIVPEDSQLQEK 107
H+P + PE +P ++Q K
Sbjct: 766 VHLP--KAPEVKLPRAPEVQLK 785
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Query: 20 IPENQEVENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTK-EQVTEDQLTEDQVPEDHV 78
+P+ E Q+P +VPE ++P++P+ VP+ ++PE Q+ K ++ ++ E VP+ H+
Sbjct: 649 VPDVHLPEVQLP--KVPEMKLPKMPEMAVPEVRLPEVQLPKVSEMKLPKVPEMAVPDVHL 706
Query: 79 PEDQVP---EDHVPEDQVPEDIVPE 100
PE Q+P E VP+ ++PE +P+
Sbjct: 707 PEVQLPKVCEMKVPDMKLPEIKLPK 731
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 18/90 (20%)
Query: 27 ENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTKEQVTEDQLTEDQVPEDHVPEDQVP-- 84
E VP +PE ++P+VP+ ++P+ ++PE ++ K + E VP+ H+PE Q+P
Sbjct: 610 EMAVPDVHLPEVQLPKVPEMKLPEMKLPEVKLPK-------VPEMAVPDVHLPEVQLPKV 662
Query: 85 ---------EDHVPEDQVPEDIVPEDSQLQ 105
E VPE ++PE +P+ S+++
Sbjct: 663 PEMKLPKMPEMAVPEVRLPEVQLPKVSEMK 692
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 27 ENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTKEQVTEDQL---TEDQVPEDHVPEDQV 83
E VP +PE ++P+VP+ ++P ++PE V + ++ E QL +E ++P VPE V
Sbjct: 646 EMAVPDVHLPEVQLPKVPEMKLP--KMPEMAVPEVRLPEVQLPKVSEMKLP--KVPEMAV 701
Query: 84 PEDHVPEDQVPE 95
P+ H+PE Q+P+
Sbjct: 702 PDVHLPEVQLPK 713
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 14/88 (15%)
Query: 19 QIPENQEVENQVPGYEVPEYEVPEVPQEQVPQEQVPESQVTKEQVTEDQLTEDQVPEDHV 78
++P+ EV ++P + PE ++P+VP+ +P+ ++PE ++ K V+E +L +VPE V
Sbjct: 435 KVPKGPEV--KLP--KAPEVKLPKVPEAALPEVRLPEVELPK--VSEMKL--PKVPEMAV 486
Query: 79 PEDQVPEDHVPE------DQVPEDIVPE 100
PE ++PE +P+ +VPE VPE
Sbjct: 487 PEVRLPEVELPKVSEMKLPKVPEMAVPE 514
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.130 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 218,984,604
Number of Sequences: 539616
Number of extensions: 10652055
Number of successful extensions: 52962
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 896
Number of HSP's that attempted gapping in prelim test: 42126
Number of HSP's gapped (non-prelim): 7808
length of query: 521
length of database: 191,569,459
effective HSP length: 122
effective length of query: 399
effective length of database: 125,736,307
effective search space: 50168786493
effective search space used: 50168786493
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)