BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009976
(521 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 181/404 (44%), Gaps = 36/404 (8%)
Query: 45 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFAS 104
+IGH+ K PH + ++++++ G + I++G P VV+S + +Q L F
Sbjct: 21 LIGHMLTLGK--NPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKG 78
Query: 105 RPSILSAKYVSVGPADVTFSPN-GPYWRQARKICVTEL----LSPKRVNSFKVVLDEEVN 159
RP + + +S G + ++FSP+ GP W R++ L ++ +S L+E V+
Sbjct: 79 RPDLYTFTLISNGQS-MSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHVS 137
Query: 160 R-------FMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASV 212
+ + + A G + + T+ C FG R+ + E L +
Sbjct: 138 KEAEVLISTLQELMAGPG-HFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNN 196
Query: 213 FIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIF----DKTSKRKQ 268
F EV + DF + Y P S N ++E F K K
Sbjct: 197 FGEV---VGSGNPADFIP-------ILRYLP---NPSLNAFKDLNEKFYSFMQKMVKEHY 243
Query: 269 PLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIM 328
+ + I+ + Q ++ +V L+D+ ++ IV D+F AG D T + W +
Sbjct: 244 KTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSL 303
Query: 329 TDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPR 387
L +PRV +K QEE+ +V+ S R+ + L YM+A I E+ R V IP
Sbjct: 304 MYLVMNPRVQRKIQEELDTVIGRSRRPRLSDR--SHLPYMEAFILETFRHSSFVPFTIPH 361
Query: 388 ESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERF 431
++ +L+G+ IP +FVN I D KL+ NP +F+PERF
Sbjct: 362 STTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERF 405
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 183/397 (46%), Gaps = 25/397 (6%)
Query: 45 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFAS 104
++G L + H +F KL +K GPI+ +++G V+V +LAK+VL + F+
Sbjct: 18 LVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSG 77
Query: 105 RPSILSAKYVSVGPADVTFSPNGPYWRQARKICV-TELLSPKRVNSFKVVLDEEVNRFMS 163
RP + + S + F+ +G +W+ R++ + T L + ++ +E++
Sbjct: 78 RPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCD 137
Query: 164 RVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGF 223
+ G D+S +F T+ L F + + E +V E +
Sbjct: 138 MLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPE-------LNVIQNYNEGIIDN 190
Query: 224 YYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDF 283
D + V WL + + ++ ++ + +++ +K + + F +
Sbjct: 191 LSKDSLVDLV--PWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKE----KFRSDSITNM 244
Query: 284 IDVLRRVQKSDDLDVP--------LTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHP 335
+D L + + + D L+D++++ + D+F AGV+ +T+ ++W + L +P
Sbjct: 245 LDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNP 304
Query: 336 RVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVN-LLIPRESSDKCT 394
+V KK EE+ V S + + + ++L ++A I+E +RL PV +LIP +++ +
Sbjct: 305 QVKKKLYEEIDQNVGFSRTPTISDR--NRLLLLEATIREVLRLRPVAPMLIPHKANVDSS 362
Query: 395 LEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERF 431
+ + + T + +N A+ + K + P F+PERF
Sbjct: 363 IGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERF 399
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 199/474 (41%), Gaps = 47/474 (9%)
Query: 50 HLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSIL 109
H+ + PH + ++++++ G + I++G P +V+S + +Q L F RP +
Sbjct: 29 HVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY 88
Query: 110 SAKYVSVGPADVTFSPN-GPYWRQARKICVTEL----LSPKRVNSFKVVLDEEVNR---- 160
++ ++ G +TFS + GP W R++ L ++ +S L+E V++
Sbjct: 89 TSTLITDG-QSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKA 147
Query: 161 FMSRVK---ARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVE 217
+SR++ A G D + + + FG F E DE + S+
Sbjct: 148 LISRLQELMAGPG-HFDPYNQVVVSVANVIGAMCFGQHFPESSDE------MLSLVKNTH 200
Query: 218 ELLTGFYYG---DFFSEWVW---PGW--LTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQP 269
E + G DFF + P + R + + + + FDK S R
Sbjct: 201 EFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVRDI- 259
Query: 270 LGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMT 329
TGA H + + S +L + + ++ +V+D+F AG D T + W +
Sbjct: 260 --TGALFKHSKKG-------PRASGNL---IPQEKIVNLVNDIFGAGFDTVTTAISWSLM 307
Query: 330 DLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRE 388
L P + +K Q+E+ +V+ R+ + QL Y++A I E+ R + IP
Sbjct: 308 YLVTKPEIQRKIQKELDTVIGRERRPRLSDRP--QLPYLEAFILETFRHSSFLPFTIPHS 365
Query: 389 SSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQEEDIXXXXXXXXXXX 448
++ TL G+ IP K +FVN + DP+L+ +P +F PERF +
Sbjct: 366 TTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMM 425
Query: 449 XXXXXXXXXXXXXXXSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAAR 502
+ +A LL ++++P GV VDL ++GL +
Sbjct: 426 LFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGV---KVDLTPIYGLTMK 476
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 172/378 (45%), Gaps = 18/378 (4%)
Query: 58 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSI-LSAKYVSV 116
PH K ++ G IF + LG + VV++ ++ K+ L ++FA RP + L K +
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKM 95
Query: 117 GPADVTFSPNGPYWRQARKICVTEL-LSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDM 175
G + S G W R++ V SF+ + EE F ++ G D
Sbjct: 96 G--GLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDF 153
Query: 176 SDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWP 235
LI ++ L FG RF ++ + Q L S +E+ + F Y F W
Sbjct: 154 KQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAF----PWI 209
Query: 236 GWLT-GYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSD 294
G L G ++ + + + + + + +K S ++P F+ + ++D + Q +
Sbjct: 210 GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFV----DAYLDEMD--QGKN 263
Query: 295 DLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGS 354
D + +NL+ V ++ +AG + +T L W + +A +P + + Q+E+ ++ +G
Sbjct: 264 DPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK 323
Query: 355 GRVEENHIHQLKYMKAVIKESMRL-HPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAI 413
++ ++ Y +AV+ E +R + V L I +S+ + GY IP T + N +++
Sbjct: 324 PSWDDK--CKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 414 GRDPKLFTNPHDFIPERF 431
D K + +P F PERF
Sbjct: 382 HFDEKYWRDPEVFHPERF 399
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 172/378 (45%), Gaps = 18/378 (4%)
Query: 58 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSI-LSAKYVSV 116
PH K ++ G IF + LG + VV++ ++ K+ L ++FA RP + L K +
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKM 95
Query: 117 GPADVTFSPNGPYWRQARKICVTEL-LSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDM 175
G + S G W R++ V SF+ + EE F ++ G D
Sbjct: 96 G--GLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDF 153
Query: 176 SDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWP 235
LI ++ L FG RF ++ + Q L S +E+ + F Y F W
Sbjct: 154 KQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAF----PWI 209
Query: 236 GWLT-GYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSD 294
G L G ++ + + + + + + +K S ++P F+ + ++D + Q +
Sbjct: 210 GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFV----DAYLDEMD--QGKN 263
Query: 295 DLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGS 354
D + +NL+ V ++ +AG + +T L W + +A +P + + Q+E+ ++ +G
Sbjct: 264 DPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK 323
Query: 355 GRVEENHIHQLKYMKAVIKESMRL-HPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAI 413
++ ++ Y +AV+ E +R + V L I +S+ + GY IP T + N +++
Sbjct: 324 PSWDDK--CKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 414 GRDPKLFTNPHDFIPERF 431
D K + +P F PERF
Sbjct: 382 HFDEKYWRDPEVFHPERF 399
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 167/393 (42%), Gaps = 24/393 (6%)
Query: 45 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFAS 104
+ G LHL H L +KLGP++ ++LG VV++SK ++ + FA
Sbjct: 34 VPGFLHLLQPNLPIH--LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAG 91
Query: 105 RPSILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSR 164
RP I S K VS D++ W+ +K+ + LL R +S + +D+ F R
Sbjct: 92 RPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR-SSMEPWVDQLTQEFCER 150
Query: 165 VKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIE-VEELLTGF 223
++ + G + C FG K L F + V++L+ +
Sbjct: 151 MRVQAGAPVTIQKEFSLLTCSIICYLTFG----------NKEDTLVHAFHDCVQDLMKTW 200
Query: 224 YYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDF 283
+ + P P + + + + N + + + K+ + G + D
Sbjct: 201 DHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQW-----RDM 255
Query: 284 IDVLRR---VQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKK 340
D + + Q+ ++ L + ++ V D+F+ G + + +TL W + L HP + ++
Sbjct: 256 TDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRR 315
Query: 341 AQEEV-RSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGY 398
QEE+ R + + RV +L + A I E +RL P V L +P ++ ++ GY
Sbjct: 316 LQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGY 375
Query: 399 EIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERF 431
+IP + N D ++ PH+F P+RF
Sbjct: 376 DIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRF 408
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 163/392 (41%), Gaps = 24/392 (6%)
Query: 59 HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGP 118
H SFA+LA + G +F I+LG P VV++ + Q L FA RPS S + VS G
Sbjct: 31 HLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVS-GG 89
Query: 119 ADVTFSPNGPYWRQARKICVTELLS--PKRVNSFKV----VLDE--EVNRFMSRVKARCG 170
+ F +W+ R+ + + + ++ S +V VL E E+ + R A G
Sbjct: 90 RSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSAD-G 148
Query: 171 LETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFS 230
D L + FG R+ D+ E + EE G
Sbjct: 149 AFLDPRPLTVVAVANVMSAVCFGCRYSHDDPE------FRELLSHNEEFGRTVGAGSLVD 202
Query: 231 EWVWPGWLTGYTPRVIKGSRNL-LNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRR 289
W + V + L N + I DK + + L GA + FI +
Sbjct: 203 VMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEK 262
Query: 290 VQKSDDL--DVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRS 347
D L +N+ A ++D+F A D + L+W++ R+P V + Q E+
Sbjct: 263 KAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQ 322
Query: 348 VVTASGSGRVE-ENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTR 405
VV G R+ L Y+ A + E+MR V + IP ++ ++ GY IP T
Sbjct: 323 VV---GRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTV 379
Query: 406 IFVNNHAIGRDPKLFTNPHDFIPERFQQEEDI 437
+FVN ++ DP + NP +F P RF ++ +
Sbjct: 380 VFVNQWSVNHDPLKWPNPENFDPARFLDKDGL 411
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 186/403 (46%), Gaps = 43/403 (10%)
Query: 48 HLHLFYKER---KPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLK---THDQV 101
+L+ F++E+ + H + +K GPI+ +LG + +V + E + K ++ +
Sbjct: 23 NLYHFWREKGSQRIHFRHIENFQKYGPIYREKLGNLESVYIIHPEDVAHLFKFEGSYPER 82
Query: 102 FASRPSILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRF 161
+ P + +Y P V F +G W++ R + TE+++P+ + +F +L+ F
Sbjct: 83 YDIPPWLAYHRYYQ-KPIGVLFKKSGT-WKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDF 140
Query: 162 MSRVKARCGLET------DMSDLIFAFCTDFFCLAAFGVRF--MEDEDEGQKSKYLASVF 213
+S + R + D+ + +F F + FG R +E+ + K++ +V+
Sbjct: 141 VSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVY 200
Query: 214 IEVEELLTGFYYGDFFSEWVWPGWLTGYTPRV-----IKGSRNLLNAVDEIFDKTSKRKQ 268
+ L P + K R+ + A D IF+K K +
Sbjct: 201 KMFHTSVP----------------LLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKYTE 244
Query: 269 PLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIM 328
++ +L + KS+ + + +++ A +++M GV+ ++ TL+W +
Sbjct: 245 IFYQDLRRKTEFRNYPGILYCLLKSEKMLL----EDVKANITEMLAGGVNTTSMTLQWHL 300
Query: 329 TDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRE 388
++AR V + +EEV + G + + + + +KA IKE++RLHP+++ + R
Sbjct: 301 YEMARSLNVQEMLREEVLNA-RRQAEGDISKM-LQMVPLLKASIKETLRLHPISVTLQRY 358
Query: 389 SSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERF 431
L+ Y IPAKT + V +A+GRDP F++P F P R+
Sbjct: 359 PESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRW 401
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 175/397 (44%), Gaps = 33/397 (8%)
Query: 49 LHLFYKE--RKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKT---HDQVFA 103
L +F+K +K H + A+ +K G IF ++LG +V + S L + + +T H Q
Sbjct: 39 LEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLE 98
Query: 104 SRPSILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMS 163
+P A A G W++ R +L+ P + ++E + F+
Sbjct: 99 IKP--WKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLE 156
Query: 164 RVKARCGLETDMSDL---IFAFCTDFFCLAAFGVRF--MEDEDEGQKSKYLASVFIEVEE 218
R+ C + DL + + + CL + RF ++ E E + ++ ++ +
Sbjct: 157 RMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAI----KT 212
Query: 219 LLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLH 278
+++ F G V P L + + L A D IF K +P +
Sbjct: 213 MMSTF--GKMM---VTPVELHKRLNTKVWQAHTL--AWDTIF----KSVKPCIDNRLQRY 261
Query: 279 GNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVM 338
+ D L + + D L + L A V+++ +A V+ + +L WI+ +L+R+P+
Sbjct: 262 SQQPGADFLCDIYQQDHL----SKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQ 317
Query: 339 KKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGY 398
++ +EV+SV+ + + R E+ + + Y+KA +KESMRL P R L Y
Sbjct: 318 RRLLQEVQSVLPDNQTPRAED--LRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEY 375
Query: 399 EIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQEE 435
+P T + +N +G F + H F PER+ Q+E
Sbjct: 376 ALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE 412
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 181/404 (44%), Gaps = 44/404 (10%)
Query: 48 HLHLFYKERKPHK---SFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKT---HDQV 101
+L+ F++E HK + +K GPI+ +LG V +V V E + K+ + +
Sbjct: 18 NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPER 77
Query: 102 FASRPSILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRF 161
F P + +Y P V + W++ R E+++P+ +F +LD F
Sbjct: 78 FLIPPWVAYHQYYQ-RPIGVLLKKSAA-WKKDRVALNQEVMAPEATKNFLPLLDAVSRDF 135
Query: 162 MSRVKARC------GLETDMSDLIFAFCTDFFCLAAFGVR--FMEDEDEGQKSKYLASVF 213
+S + R D+SD +F F + FG R +E+ + +++ +++
Sbjct: 136 VSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIY 195
Query: 214 IEVEELLTGFYYG-DFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQ---- 268
+ D F + W ++ + A D IF K Q
Sbjct: 196 QMFHTSVPMLNLPPDLFRLFRTKTW------------KDHVAAWDVIFSKADIYTQNFYW 243
Query: 269 PLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIM 328
L + H D+ +L R+ D ++ +++ A V++M GVD ++ TL+W +
Sbjct: 244 ELRQKGSVHH---DYRGILYRLLG----DSKMSFEDIKANVTEMLAGGVDTTSMTLQWHL 296
Query: 329 TDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQL-KYMKAVIKESMRLHPVNLLIPR 387
++AR+ +V + EV + A + + + QL +KA IKE++RLHP+++ + R
Sbjct: 297 YEMARNLKVQDMLRAEV---LAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQR 353
Query: 388 ESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERF 431
+ L Y IPAKT + V +A+GR+P F +P +F P R+
Sbjct: 354 YLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRW 397
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 173/388 (44%), Gaps = 40/388 (10%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
KS K +E GP+F + LG P VV+ E K+ L + FA R S+ + VS G
Sbjct: 34 KSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGEEFAGRGSVPILEKVSKG-L 92
Query: 120 DVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
+ FS N W++ R+ + L + KR S + + EE + ++ D +
Sbjct: 93 GIAFS-NAKTWKEMRRFSLMTLRNFGMGKR--SIEDRIQEEARCLVEELRKTNASPCDPT 149
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFY--YGDFFSEWVW 234
++ + C F RF D + + K + S+ VE L T + Y +F
Sbjct: 150 FILGCAPCNVICSVIFHNRF--DYKDEEFLKLMESLHENVELLGTPWLQVYNNF------ 201
Query: 235 PGWLTGYTPRVIKGSRNLLNAVDEI----FDKTSKRKQPLGTGAFLLHGNEDFIDV-LRR 289
P L Y P + + LL D I +K + ++ L ++ DFID L +
Sbjct: 202 PALL-DYFPGI---HKTLLKNADYIKNFIMEKVKEHQKLLD-----VNNPRDFIDCFLIK 252
Query: 290 VQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVV 349
+++ ++L+ L ++L+ VSD+F AG + ++ TL + + L +HP V + QEE+ V+
Sbjct: 253 MEQENNLEFTL--ESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVI 310
Query: 350 TASGSGRVEENHIHQLKYMKAVIKESMR---LHPVNLLIPRESSDKCTLEGYEIPAKTRI 406
S +++ ++ Y AVI E R L P NL P + Y IP T I
Sbjct: 311 GRHRSPCMQDR--SRMPYTDAVIHEIQRFIDLLPTNL--PHAVTRDVRFRNYFIPKGTDI 366
Query: 407 FVNNHAIGRDPKLFTNPHDFIPERFQQE 434
+ ++ D K F NP F P F E
Sbjct: 367 ITSLTSVLHDEKAFPNPKVFDPGHFLDE 394
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 181/404 (44%), Gaps = 44/404 (10%)
Query: 48 HLHLFYKERKPHK---SFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKT---HDQV 101
+L+ F++E HK + +K GPI+ +LG V +V V E + K+ + +
Sbjct: 21 NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPER 80
Query: 102 FASRPSILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRF 161
F P + +Y P V + W++ R E+++P+ +F +LD F
Sbjct: 81 FLIPPWVAYHQYYQ-RPIGVLLKKSAA-WKKDRVALNQEVMAPEATKNFLPLLDAVSRDF 138
Query: 162 MSRVKARC------GLETDMSDLIFAFCTDFFCLAAFGVR--FMEDEDEGQKSKYLASVF 213
+S + R D+SD +F F + FG R +E+ + +++ +++
Sbjct: 139 VSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIY 198
Query: 214 IEVEELLTGFYYG-DFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQ---- 268
+ D F + W ++ + A D IF K Q
Sbjct: 199 QMFHTSVPMLNLPPDLFRLFRTKTW------------KDHVAAWDVIFSKADIYTQNFYW 246
Query: 269 PLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIM 328
L + H D+ +L R+ D ++ +++ A V++M GVD ++ TL+W +
Sbjct: 247 ELRQKGSVHH---DYRGILYRLLG----DSKMSFEDIKANVTEMLAGGVDTTSMTLQWHL 299
Query: 329 TDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQL-KYMKAVIKESMRLHPVNLLIPR 387
++AR+ +V + EV + A + + + QL +KA IKE++RLHP+++ + R
Sbjct: 300 YEMARNLKVQDMLRAEV---LAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQR 356
Query: 388 ESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERF 431
+ L Y IPAKT + V +A+GR+P F +P +F P R+
Sbjct: 357 YLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRW 400
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 167/395 (42%), Gaps = 40/395 (10%)
Query: 48 HLHLFYKERKPHKSFAKLAEKLGPIFYIQLG--RVPAVVVSSK-ELAKQVLKTHDQVFAS 104
HLHL + H++F ++LGPIF LG R+ V++ E +QV H
Sbjct: 37 HLHL-----EMHQTF----QELGPIFRYNLGGPRMVCVMLPEDVEKLQQVDSLHPCRMIL 87
Query: 105 RPSILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSR 164
P + ++ G F NGP WR R ++LSPK V F ++D F
Sbjct: 88 EPWVAYRQHR--GHKCGVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQA 145
Query: 165 VK------ARCGLETDMSDLIFAFCTDFFCLAAFGVRF--MEDEDEGQKSKYLASVFIEV 216
+K AR L D+ IF + + LA FG R + +L ++ +
Sbjct: 146 LKKKVLQNARGSLTLDVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMF 205
Query: 217 EELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFL 276
+ + + S W+ +P+V K A D IF Q +
Sbjct: 206 KSTVQLMFMPRSLSRWI--------SPKVWKEH---FEAWDCIFQYGDNCIQKI-YQELA 253
Query: 277 LHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPR 336
+ + + ++ + +L + N M + + VD + L + +LAR+P
Sbjct: 254 FNRPQHYTGIVAELLLKAELSLEAIKANSMELTA----GSVDTTAFPLLMTLFELARNPD 309
Query: 337 VMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLE 396
V + ++E S+ A+ + +L ++A +KE++RL+PV L + R S L+
Sbjct: 310 VQQILRQE--SLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQ 367
Query: 397 GYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERF 431
Y IPA T + V +++GR+ LF P + P+R+
Sbjct: 368 NYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRW 402
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 158/389 (40%), Gaps = 45/389 (11%)
Query: 62 FAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGP--A 119
F +L + G +F +QL P VV++ ++ L TH + A RP + + + GP
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 120 DVTFSPNGPYWRQARKICVTEL----LSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDM 175
V + GP WR+ R+ V+ L L K + + + EE + G
Sbjct: 96 GVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQW---VTEEAACLCAAFANHSGRPFRP 152
Query: 176 SDLIFAFCTDFFCLAAFGVRFMEDE----------DEG--QKSKYLASVFIEVEELLTGF 223
+ L+ ++ G RF D+ EG ++S +L V V LL
Sbjct: 153 NGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLH-- 210
Query: 224 YYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDF 283
+ +V++ + L +DE+ + P L E F
Sbjct: 211 --------------IPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDL---TEAF 253
Query: 284 IDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQE 343
+ + + + + + D+NL +V+D+F AG+ ++ TL W + + HP V ++ Q+
Sbjct: 254 LAEMEKAKGNPESS--FNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQ 311
Query: 344 EVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPA 402
E+ V+ R E + Y AVI E R V L + +S ++G+ IP
Sbjct: 312 EIDDVI--GQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPK 369
Query: 403 KTRIFVNNHAIGRDPKLFTNPHDFIPERF 431
T + N ++ +D ++ P F PE F
Sbjct: 370 GTTLITNLSSVLKDEAVWEKPFRFHPEHF 398
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 153/382 (40%), Gaps = 31/382 (8%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
+SF +L EK G +F + LG P VV+ + ++ L + F+ R I + G
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-Y 92
Query: 120 DVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
V F+ NG WR R+ + + KR S + + EE + ++ G D +
Sbjct: 93 GVIFA-NGERWRALRRFSLATMRDFGMGKR--SVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEW---- 232
L + ++ C FG RF Y VF+ + +L +
Sbjct: 150 LLFHSITSNIICSIVFGKRF----------DYKDPVFLRLLDLFFQSFSLISSFSSQVFE 199
Query: 233 VWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDV--LRRV 290
++ G+L + + RNL I K + L DFIDV LR
Sbjct: 200 LFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS-----NPRDFIDVYLLRME 254
Query: 291 QKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVT 350
+ D NL+ V +F AG + ++ TL + + ++P V ++ Q+E+ V+
Sbjct: 255 KDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG 314
Query: 351 ASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVN 409
+ +++ ++ Y AVI E RL + +P + GY IP T +F
Sbjct: 315 SHRPPALDDR--AKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPV 372
Query: 410 NHAIGRDPKLFTNPHDFIPERF 431
+ DP+ F P+ F P F
Sbjct: 373 LSSALHDPRYFETPNTFNPGHF 394
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 153/382 (40%), Gaps = 31/382 (8%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
+SF +L EK G +F + LG P VV+ + ++ L + F+ R I + G
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-Y 92
Query: 120 DVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
V F+ NG WR R+ + + KR S + + EE + ++ G D +
Sbjct: 93 GVIFA-NGERWRALRRFSLATMRDFGMGKR--SVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEW---- 232
L + ++ C FG RF Y VF+ + +L +
Sbjct: 150 LLFHSITSNIICSIVFGKRF----------DYKDPVFLRLLDLFFQSFSLISSFSSQVFE 199
Query: 233 VWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDV--LRRV 290
++ G+L + + RNL I K + L DFIDV LR
Sbjct: 200 LFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS-----NPRDFIDVYLLRME 254
Query: 291 QKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVT 350
+ D NL+ V +F AG + ++ TL + + ++P V ++ Q+E+ V+
Sbjct: 255 KDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG 314
Query: 351 ASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVN 409
+ +++ ++ Y AVI E RL + +P + GY IP T +F
Sbjct: 315 SHRPPALDDR--AKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPV 372
Query: 410 NHAIGRDPKLFTNPHDFIPERF 431
+ DP+ F P+ F P F
Sbjct: 373 LSSALHDPRYFETPNTFNPGHF 394
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 153/382 (40%), Gaps = 31/382 (8%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
+SF +L EK G +F + LG P VV+ + ++ L + F+ R I + G
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-Y 92
Query: 120 DVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
V F+ NG WR R+ + + KR S + + EE + ++ G D +
Sbjct: 93 GVIFA-NGERWRALRRFSLATMRDFGMGKR--SVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEW---- 232
L + ++ C FG RF Y VF+ + +L +
Sbjct: 150 LLFHSITSNIICSIVFGKRF----------DYKDPVFLRLLDLFFQSFSLISSFSSQVFE 199
Query: 233 VWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDV--LRRV 290
++ G+L + + RNL I K + L DFIDV LR
Sbjct: 200 LFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS-----NPRDFIDVYLLRME 254
Query: 291 QKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVT 350
+ D NL+ V +F AG + ++ TL + + ++P V ++ Q+E+ V+
Sbjct: 255 KDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG 314
Query: 351 ASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVN 409
+ +++ ++ Y AVI E RL + +P + GY IP T +F
Sbjct: 315 SHRPPALDDR--AKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPV 372
Query: 410 NHAIGRDPKLFTNPHDFIPERF 431
+ DP+ F P+ F P F
Sbjct: 373 LSSALHDPRYFETPNTFNPGHF 394
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 153/382 (40%), Gaps = 31/382 (8%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
+SF +L EK G +F + LG P VV+ + ++ L + F+ R I + G
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-Y 92
Query: 120 DVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
V F+ NG WR R+ + + KR S + + EE + ++ G D +
Sbjct: 93 GVIFA-NGERWRALRRFSLATMRDFGMGKR--SVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEW---- 232
L + ++ C FG RF Y VF+ + +L +
Sbjct: 150 LLFHSITSNIICSIVFGKRF----------DYKDPVFLRLLDLFFQSFSLISSFSSQVFE 199
Query: 233 VWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDV--LRRV 290
++ G+L + + RNL I K + L DFIDV LR
Sbjct: 200 LFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS-----NPRDFIDVYLLRME 254
Query: 291 QKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVT 350
+ D NL+ V +F AG + ++ TL + + ++P V ++ Q+E+ V+
Sbjct: 255 KDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG 314
Query: 351 ASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVN 409
+ +++ ++ Y AVI E RL + +P + GY IP T +F
Sbjct: 315 SHRPPALDDR--AKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPV 372
Query: 410 NHAIGRDPKLFTNPHDFIPERF 431
+ DP+ F P+ F P F
Sbjct: 373 LSSALHDPRYFETPNTFNPGHF 394
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 158/377 (41%), Gaps = 21/377 (5%)
Query: 62 FAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGP--A 119
F +L + G +F +QL P VV++ ++ L TH + A RP + + + GP
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 120 DVTFSPNGPYWRQARKICVTEL----LSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDM 175
V + GP WR+ R+ V+ L L K + + + EE + G
Sbjct: 96 GVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQW---VTEEAACLCAAFANHSGRPFRP 152
Query: 176 SDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWP 235
+ L+ ++ G RF D+ + LA ++ E +GF + +
Sbjct: 153 NGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEE---SGFLR-EVLNAVPVD 208
Query: 236 GWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDD 295
+ +V++ + L +DE+ + P L E F+ + + + + +
Sbjct: 209 RHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDL---TEAFLAEMEKAKGNPE 265
Query: 296 LDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSG 355
D+NL +V+D+F AG+ ++ TL W + + HP V ++ Q+E+ V+
Sbjct: 266 SS--FNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVI--GQVR 321
Query: 356 RVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIG 414
R E + Y AVI E R V L + +S ++G+ IP T + N ++
Sbjct: 322 RPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVL 381
Query: 415 RDPKLFTNPHDFIPERF 431
+D ++ P F PE F
Sbjct: 382 KDEAVWEKPFRFHPEHF 398
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 153/382 (40%), Gaps = 31/382 (8%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
+SF +L EK G +F + LG P VV+ + ++ L + F+ R I + G
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-Y 92
Query: 120 DVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
V F+ NG WR R+ + + KR S + + EE + ++ G D +
Sbjct: 93 GVIFA-NGERWRALRRFSLATMRDFGMGKR--SVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEW---- 232
L + ++ C FG RF Y VF+ + +L +
Sbjct: 150 LLFHSITSNIICSIVFGKRF----------DYKDPVFLRLLDLFFQSFSLISSFSSQVFE 199
Query: 233 VWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDV--LRRV 290
++ G+L + + RNL I K + L DFIDV LR
Sbjct: 200 LFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS-----NPRDFIDVYLLRME 254
Query: 291 QKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVT 350
+ D NL+ V +F AG + ++ TL + + ++P V ++ Q+E+ V+
Sbjct: 255 KDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG 314
Query: 351 ASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVN 409
+ +++ ++ Y AVI E RL + +P + GY IP T +F
Sbjct: 315 SHRPPALDDR--AKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPV 372
Query: 410 NHAIGRDPKLFTNPHDFIPERF 431
+ DP+ F P+ F P F
Sbjct: 373 LSSALHDPRYFETPNTFNPGHF 394
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 162/384 (42%), Gaps = 25/384 (6%)
Query: 59 HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGP 118
+ S K++E+ GP+F I LG VV+ + ++ L + F+ R + +V G
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKG- 91
Query: 119 ADVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDM 175
V FS NG +Q R+ + L KR + + EE + ++ G D
Sbjct: 92 YGVVFS-NGERAKQLRRFSIATLRDFGVGKR--GIEERIQEEAGFLIDALRGTGGANIDP 148
Query: 176 SDLIFAFCTDFFCLAAFGVRF-MEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVW 234
+ + ++ FG RF +D++ + + +F + TG Y F S
Sbjct: 149 TFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIF-QFTSTSTGQLYEMFSS---- 203
Query: 235 PGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFID--VLRRVQK 292
+ + P + + LL +++ K + Q + DFID ++R ++
Sbjct: 204 ---VMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQ----RTLDPNSPRDFIDSFLIRMQEE 256
Query: 293 SDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTAS 352
+ + NL+ ++F+ G + + TL + L +HP V K EE+ V+ +
Sbjct: 257 EKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN 316
Query: 353 GSGRVEENHIHQLKYMKAVIKESMRLHPV-NLLIPRESSDKCTLEGYEIPAKTRIFVNNH 411
+ E+ ++ YM+AVI E R V + + R + +P T ++
Sbjct: 317 RQPKFEDRA--KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLG 374
Query: 412 AIGRDPKLFTNPHDFIPERFQQEE 435
++ RDP F+NP DF P+ F E+
Sbjct: 375 SVLRDPSFFSNPQDFNPQHFLNEK 398
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 162/383 (42%), Gaps = 33/383 (8%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
KSF ++ GP+F + G P VV E K+ L + + F+ R + ++ ++ G
Sbjct: 34 KSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLG 93
Query: 120 DVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
+ S NG W++ R+ +T L + KR S + + EE + + ++ D +
Sbjct: 94 II--SSNGKRWKEIRRFSLTTLRNFGMGKR--SIEDRVQEEAHCLVEELRKTKASPCDPT 149
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWV--- 233
++ + C F RF + + Q L F E +L S W+
Sbjct: 150 FILGCAPCNVICSVVFQKRF---DYKDQNFLTLMKRFNENFRILN--------SPWIQVC 198
Query: 234 --WPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFID--VLRR 289
+P + + K +N+ I +K + + L ++ DFID +++
Sbjct: 199 NNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLD-----VNNPRDFIDCFLIKM 253
Query: 290 VQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVV 349
Q+ D+ +NL+ V+D+FVAG + ++ TL + + L +HP V K QEE+ V+
Sbjct: 254 EQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVI 313
Query: 350 TASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFV 408
S +++ + Y AV+ E R V +P + Y IP T I
Sbjct: 314 GRHRSPCMQDR--SHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMA 371
Query: 409 NNHAIGRDPKLFTNPHDFIPERF 431
++ D K F NP+ F P F
Sbjct: 372 LLTSVLHDDKEFPNPNIFDPGHF 394
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 161/384 (41%), Gaps = 25/384 (6%)
Query: 59 HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGP 118
+ S K++E+ GP+F I LG VV+ + ++ L + F+ R + +V G
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKG- 91
Query: 119 ADVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDM 175
V FS NG +Q R+ + L KR + + EE + ++ G D
Sbjct: 92 YGVVFS-NGERAKQLRRFSIATLRDFGVGKR--GIEERIQEEAGFLIDALRGTGGANIDP 148
Query: 176 SDLIFAFCTDFFCLAAFGVRF-MEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVW 234
+ + ++ FG RF +D++ + + +F + TG Y F S
Sbjct: 149 TFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIF-QFTSTSTGQLYEMFSS---- 203
Query: 235 PGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFID--VLRRVQK 292
+ + P + + LL +++ K + Q + DFID ++R ++
Sbjct: 204 ---VMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQ----RTLDPNSPRDFIDSFLIRMQEE 256
Query: 293 SDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTAS 352
+ + NL+ +FV G + + TL + L +HP V K EE+ V+ +
Sbjct: 257 EKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN 316
Query: 353 GSGRVEENHIHQLKYMKAVIKESMRLHPV-NLLIPRESSDKCTLEGYEIPAKTRIFVNNH 411
+ E+ ++ YM+AVI E R V + + R + +P T ++
Sbjct: 317 RQPKFEDRA--KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLG 374
Query: 412 AIGRDPKLFTNPHDFIPERFQQEE 435
++ RDP F+NP DF P+ F E+
Sbjct: 375 SVLRDPSFFSNPQDFNPQHFLNEK 398
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 174/398 (43%), Gaps = 29/398 (7%)
Query: 45 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFAS 104
IIG+L + P KSF +LA++ GP+F + +G VV+ + K+ L + F+
Sbjct: 20 IIGNLFQLELKNIP-KSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSG 78
Query: 105 RPSILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRF 161
R + + + + F+ NGP W+ R+ +T L + K+ N ++ E +
Sbjct: 79 RGDL--PAFHAHRDRGIIFN-NGPTWKDIRRFSLTTLRNYGMGKQGNESRI--QREAHFL 133
Query: 162 MSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLT 221
+ ++ G D + LI + F F ++++ + YL F E LL+
Sbjct: 134 LEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYL---FNENFHLLS 190
Query: 222 GFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNE 281
+ + + + +L G +VIK N+ + + ++ + Q L
Sbjct: 191 TPWLQLYNNFPSFLHYLPGSHRKVIK---NVAEVKEYVSERVKEHHQSLDPNC-----PR 242
Query: 282 DFIDVL--RRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
D D L ++ + T D + V+D+F AG + ++ TL + + L ++P + +
Sbjct: 243 DLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEE 302
Query: 340 KAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMR---LHPVNLLIPRESSDKCTLE 396
K EE+ V+ S +++ ++ YM AV+ E R L P NL P E++
Sbjct: 303 KLHEEIDRVIGPSRIPAIKDR--QEMPYMDAVVHEIQRFITLVPSNL--PHEATRDTIFR 358
Query: 397 GYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQE 434
GY IP T + ++ D + F +P F PE F E
Sbjct: 359 GYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNE 396
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 156/379 (41%), Gaps = 25/379 (6%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
KSF + EK G +F + LG P V++ E ++ L + F+ R I G
Sbjct: 34 KSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRG-Y 92
Query: 120 DVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
V F+ NG W+ R+ VT + KR S + + EE + ++ G D +
Sbjct: 93 GVIFA-NGNRWKVLRRFSVTTMRDFGMGKR--SVEERIQEEAQCLIEELRKSKGALMDPT 149
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPG 236
L + + C FG RF + E K + ++F + L++ +G F ++ G
Sbjct: 150 FLFQSITANIICSIVFGKRFHYQDQEFLK---MLNLFYQTFSLISSV-FGQLFE--LFSG 203
Query: 237 WLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFID--VLRRVQKSD 294
+L + + +NL I K ++ L A D ID +L ++
Sbjct: 204 FLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSA-----PRDLIDTYLLHMEKEKS 258
Query: 295 DLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGS 354
+ + NL +F AG + ++ TL + + ++P V ++ E+ V+ G
Sbjct: 259 NAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVI---GP 315
Query: 355 GRVEENHIH-QLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVNNHA 412
R E H ++ Y +AVI E R + + +P + + GY IP T +F+
Sbjct: 316 HRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILST 375
Query: 413 IGRDPKLFTNPHDFIPERF 431
DP F P F P+ F
Sbjct: 376 ALHDPHYFEKPDAFNPDHF 394
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 161/384 (41%), Gaps = 25/384 (6%)
Query: 59 HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGP 118
+ S K++E+ GP+F I LG VV+ + ++ L + F+ R + +V G
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKG- 91
Query: 119 ADVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDM 175
V FS NG +Q R+ + L KR + + EE + ++ G D
Sbjct: 92 YGVVFS-NGERAKQLRRFSIATLRDFGVGKR--GIEERIQEEAGFLIDALRGTGGANIDP 148
Query: 176 SDLIFAFCTDFFCLAAFGVRF-MEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVW 234
+ + ++ FG RF +D++ + + +F + TG Y F S
Sbjct: 149 TFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIF-QFTSTSTGQLYEMFSS---- 203
Query: 235 PGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFID--VLRRVQK 292
+ + P + + LL +++ K + Q + DFID ++R ++
Sbjct: 204 ---VMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQ----RTLDPNSPRDFIDSFLIRMQEE 256
Query: 293 SDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTAS 352
+ + NL+ +F+ G + + TL + L +HP V K EE+ V+ +
Sbjct: 257 EKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN 316
Query: 353 GSGRVEENHIHQLKYMKAVIKESMRLHPV-NLLIPRESSDKCTLEGYEIPAKTRIFVNNH 411
+ E+ ++ YM+AVI E R V + + R + +P T ++
Sbjct: 317 RQPKFEDRA--KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLG 374
Query: 412 AIGRDPKLFTNPHDFIPERFQQEE 435
++ RDP F+NP DF P+ F E+
Sbjct: 375 SVLRDPSFFSNPQDFNPQHFLNEK 398
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 169/399 (42%), Gaps = 53/399 (13%)
Query: 59 HKSFA----KLAEKLGPIFYIQLGRVPAVVVSSKELAKQVL-KTHDQVFASR----PSIL 109
HK F + +K G ++ G+ P + ++ ++ K VL K VF +R P
Sbjct: 33 HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF 92
Query: 110 SAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLD--EEVNRFMSRVKA 167
+S+ + W++ R + S K ++ + + R + R +A
Sbjct: 93 MKSAISIAEDE--------EWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR-EA 143
Query: 168 RCGLETDMSDLIFAFCTDFFCLAAFGVR----------FMEDEDEGQKSKYLASVFIEVE 217
G + D+ A+ D +FGV F+E+ + + +L F+ +
Sbjct: 144 ETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSIT 203
Query: 218 ELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLL 277
+ + V+P +T + + +K + + + T K +
Sbjct: 204 VFPFLIPILEVLNICVFPREVTNFLRKSVKRMK------ESRLEDTQKHRV--------- 248
Query: 278 HGNEDFIDVLRRVQKSDDLDV--PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHP 335
DF+ ++ Q S + + L+D L+A AG + +++ L +IM +LA HP
Sbjct: 249 ----DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHP 304
Query: 336 RVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTL 395
V +K QEE+ +V+ + + Q++Y+ V+ E++RL P+ + + R +
Sbjct: 305 DVQQKLQEEIDAVLPNKAPPTYDT--VLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI 362
Query: 396 EGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQE 434
G IP + + ++A+ RDPK +T P F+PERF ++
Sbjct: 363 NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 401
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 169/399 (42%), Gaps = 53/399 (13%)
Query: 59 HKSFA----KLAEKLGPIFYIQLGRVPAVVVSSKELAKQVL-KTHDQVFASR----PSIL 109
HK F + +K G ++ G+ P + ++ ++ K VL K VF +R P
Sbjct: 32 HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF 91
Query: 110 SAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLD--EEVNRFMSRVKA 167
+S+ + W++ R + S K ++ + + R + R +A
Sbjct: 92 MKSAISIAEDE--------EWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR-EA 142
Query: 168 RCGLETDMSDLIFAFCTDFFCLAAFGVR----------FMEDEDEGQKSKYLASVFIEVE 217
G + D+ A+ D +FGV F+E+ + + +L F+ +
Sbjct: 143 ETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSIT 202
Query: 218 ELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLL 277
+ + V+P +T + + +K + + + T K +
Sbjct: 203 VFPFLIPILEVLNICVFPREVTNFLRKSVKRMK------ESRLEDTQKHRV--------- 247
Query: 278 HGNEDFIDVLRRVQKSDDLDV--PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHP 335
DF+ ++ Q S + + L+D L+A AG + +++ L +IM +LA HP
Sbjct: 248 ----DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHP 303
Query: 336 RVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTL 395
V +K QEE+ +V+ + + Q++Y+ V+ E++RL P+ + + R +
Sbjct: 304 DVQQKLQEEIDAVLPNKAPPTYDT--VLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI 361
Query: 396 EGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQE 434
G IP + + ++A+ RDPK +T P F+PERF ++
Sbjct: 362 NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 400
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 169/399 (42%), Gaps = 53/399 (13%)
Query: 59 HKSFA----KLAEKLGPIFYIQLGRVPAVVVSSKELAKQVL-KTHDQVFASR----PSIL 109
HK F + +K G ++ G+ P + ++ ++ K VL K VF +R P
Sbjct: 34 HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF 93
Query: 110 SAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLD--EEVNRFMSRVKA 167
+S+ + W++ R + S K ++ + + R + R +A
Sbjct: 94 MKSAISIAEDE--------EWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR-EA 144
Query: 168 RCGLETDMSDLIFAFCTDFFCLAAFGVR----------FMEDEDEGQKSKYLASVFIEVE 217
G + D+ A+ D +FGV F+E+ + + +L F+ +
Sbjct: 145 ETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSIT 204
Query: 218 ELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLL 277
+ + V+P +T + + +K + + + T K +
Sbjct: 205 VFPFLIPILEVLNICVFPREVTNFLRKSVKRMK------ESRLEDTQKHRV--------- 249
Query: 278 HGNEDFIDVLRRVQKSDDLDV--PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHP 335
DF+ ++ Q S + + L+D L+A AG + +++ L +IM +LA HP
Sbjct: 250 ----DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHP 305
Query: 336 RVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTL 395
V +K QEE+ +V+ + + Q++Y+ V+ E++RL P+ + + R +
Sbjct: 306 DVQQKLQEEIDAVLPNKAPPTYDT--VLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI 363
Query: 396 EGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQE 434
G IP + + ++A+ RDPK +T P F+PERF ++
Sbjct: 364 NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 402
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 157/383 (40%), Gaps = 23/383 (6%)
Query: 59 HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGP 118
+ S K++E+ GP+F I LG VV+ + ++ L + F+ R + +V G
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKG- 91
Query: 119 ADVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDM 175
V FS NG +Q R+ + L KR + + EE + ++ G D
Sbjct: 92 YGVVFS-NGERAKQLRRFSIATLRDFGVGKR--GIEERIQEEAGFLIDALRGTGGANIDP 148
Query: 176 SDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWP 235
+ + ++ FG RF + E + + TG Y F S
Sbjct: 149 TFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGSFQFTSTSTGQLYEMFSS----- 203
Query: 236 GWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFID--VLRRVQKS 293
+ + P + + LL +++ K + Q + DFID ++R ++
Sbjct: 204 --VMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQ----RTLDPNSPRDFIDSFLIRMQEEE 257
Query: 294 DDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASG 353
+ + NL+ ++F AG + + TL + L +HP V K EE+ V+ +
Sbjct: 258 KNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR 317
Query: 354 SGRVEENHIHQLKYMKAVIKESMRLHPV-NLLIPRESSDKCTLEGYEIPAKTRIFVNNHA 412
+ E+ ++ YM+AVI E R V + + R + +P T ++ +
Sbjct: 318 QPKFEDRA--KMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGS 375
Query: 413 IGRDPKLFTNPHDFIPERFQQEE 435
+ RDP F+NP DF P+ F E+
Sbjct: 376 VLRDPSFFSNPQDFNPQHFLNEK 398
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 160/384 (41%), Gaps = 25/384 (6%)
Query: 59 HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGP 118
+ S K++E+ GP+F I LG VV+ + ++ L + F+ R + +V G
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKG- 91
Query: 119 ADVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDM 175
V FS NG +Q R+ + L KR + + EE + ++ G D
Sbjct: 92 YGVVFS-NGERAKQLRRFSIATLRDFGVGKR--GIEERIQEEAGFLIDALRGTGGANIDP 148
Query: 176 SDLIFAFCTDFFCLAAFGVRF-MEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVW 234
+ + ++ FG RF +D++ + + +F + TG Y F S
Sbjct: 149 TFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIF-QFTSTSTGQLYEMFSS---- 203
Query: 235 PGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFID--VLRRVQK 292
+ + P + + L +++ K + Q + DFID ++R ++
Sbjct: 204 ---VMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQ----RTLDPNSPRDFIDSFLIRMQEE 256
Query: 293 SDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTAS 352
+ + NL+ +F+ G + + TL + L +HP V K EE+ V+ +
Sbjct: 257 EKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN 316
Query: 353 GSGRVEENHIHQLKYMKAVIKESMRLHPV-NLLIPRESSDKCTLEGYEIPAKTRIFVNNH 411
+ E+ ++ YM+AVI E R V + + R + +P T ++
Sbjct: 317 RQPKFEDRA--KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLG 374
Query: 412 AIGRDPKLFTNPHDFIPERFQQEE 435
++ RDP F+NP DF P+ F E+
Sbjct: 375 SVLRDPSFFSNPQDFNPQHFLNEK 398
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 163/388 (42%), Gaps = 37/388 (9%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
KS L++ GP+F + G P VV+ E K+ L + F+ R A+ + G
Sbjct: 33 KSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRG-F 91
Query: 120 DVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
+ FS NG W++ R+ + L + KR S + + EE + ++ D +
Sbjct: 92 GIVFS-NGKKWKEIRRFSLMTLRNFGMGKR--SIEDRVQEEARCLVEELRKTKASPCDPT 148
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWV--- 233
++ + C F RF + + Q+ L E E+L+ S W+
Sbjct: 149 FILGCAPCNVICSIIFHKRF---DYKDQQFLNLMEKLNENIEILS--------SPWIQVY 197
Query: 234 --WPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQ 291
+P L + K +N+ I +K + ++ + ++ +DFID
Sbjct: 198 NNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMD-----MNNPQDFIDCFLMKM 252
Query: 292 KSDDLDVP--LTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVV 349
+ + + P T ++L D+F AG + ++ TL + + L +HP V K QEE+ V+
Sbjct: 253 EKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVI 312
Query: 350 TASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLL---IPRESSDKCTLEGYEIPAKTRI 406
+ S +++ + Y AV+ E R ++LL +P + Y IP T I
Sbjct: 313 GRNRSPCMQDR--SHMPYTDAVVHEVQRY--IDLLPTSLPHAVTCDIKFRNYLIPKGTTI 368
Query: 407 FVNNHAIGRDPKLFTNPHDFIPERFQQE 434
++ ++ D K F NP F P F E
Sbjct: 369 LISLTSVLHDNKEFPNPEMFDPHHFLDE 396
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 27/381 (7%)
Query: 59 HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGP 118
+ S K++E+ GP+F I LG VV+ + K+ L + F+ R + ++ G
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGEQATFDWLFKG- 91
Query: 119 ADVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDM 175
V FS NG +Q R+ + L KR + + EE + ++ G D
Sbjct: 92 YGVAFS-NGERAKQLRRFSIATLRGFGVGKR--GIEERIQEEAGFLIDALRGTHGANIDP 148
Query: 176 SDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWP 235
+ + ++ FG RF ++ E + + TG Y + FS +
Sbjct: 149 TFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLY-EMFSSVMK- 206
Query: 236 GWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFID--VLRRVQKS 293
L G + K + L + + + + + P + DFID ++R ++
Sbjct: 207 -HLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDP--------NSPRDFIDSFLIRMQEEE 257
Query: 294 DDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASG 353
+ + NL+ ++F AG + + TL + L +HP V K EE+ V+ +
Sbjct: 258 KNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR 317
Query: 354 SGRVEENHIHQLKYMKAVIKESMR---LHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNN 410
+ E+ ++ Y +AVI E R + P+ L + + +P T +F
Sbjct: 318 QPKFEDRA--KMPYTEAVIHEIQRFGDMLPMGLA--HRVNKDTKFRDFFLPKGTEVFPML 373
Query: 411 HAIGRDPKLFTNPHDFIPERF 431
++ RDP+ F+NP DF P+ F
Sbjct: 374 GSVLRDPRFFSNPRDFNPQHF 394
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 165/391 (42%), Gaps = 43/391 (10%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
KS L++ GP+F + G P VV+ E K+ L + F+ R A+ + G
Sbjct: 35 KSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRG-F 93
Query: 120 DVTFSPNGPYWRQARKICVTELLS---PKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
+ FS NG W++ R+ + L + KR S + + EE + ++ D +
Sbjct: 94 GIVFS-NGKKWKEIRRFSLMTLRNFGMGKR--SIEDRVQEEARCLVEELRKTKASPCDPT 150
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDE--------GQKSKYLASVFIEVEELLTGFYYGDF 228
++ + C F RF + + + K L+S +I++ +
Sbjct: 151 FILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQI---------CNN 201
Query: 229 FSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLR 288
FS + + G +++K N+ I +K + ++ + ++ +DFID
Sbjct: 202 FSPII--DYFPGTHNKLLK---NVAFMKSYILEKVKEHQESMD-----MNNPQDFIDCFL 251
Query: 289 RVQKSDDLDVP--LTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVR 346
+ + + P T ++L D+F AG + ++ TL + + L +HP V K QEE+
Sbjct: 252 MKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIE 311
Query: 347 SVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLL---IPRESSDKCTLEGYEIPAK 403
V+ + S +++ + Y AV+ E R ++LL +P + Y IP
Sbjct: 312 RVIGRNRSPCMQDR--SHMPYTDAVVHEVQRY--IDLLPTSLPHAVTCDIKFRNYLIPKG 367
Query: 404 TRIFVNNHAIGRDPKLFTNPHDFIPERFQQE 434
T I ++ ++ D K F NP F P F E
Sbjct: 368 TTILISLTSVLHDNKEFPNPEMFDPHHFLDE 398
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 164/378 (43%), Gaps = 33/378 (8%)
Query: 62 FAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKT-----HDQVFASRPSILSAKYVSV 116
F A+K GP+ + + +V+V+S E K+ L + +++ + ++ +
Sbjct: 16 FLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQ 75
Query: 117 GPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--D 174
G + N W + R++ + S + S +E+ + + ++A+ +T
Sbjct: 76 G---LVSECNYERWHKQRRV-IDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVS 131
Query: 175 MSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVW 234
M D++ D AAFG ME K L+ V+ +L G
Sbjct: 132 MQDMLTYTAMDILAKAAFG---METSMLLGAQKPLSQA---VKLMLEGITASRNTLAKFL 185
Query: 235 PGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSD 294
PG R ++ S L V D +R++ L G E D+L ++ K++
Sbjct: 186 PGKRKQL--REVRESIRFLRQVGR--DWVQRRREALK------RGEEVPADILTQILKAE 235
Query: 295 DLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGS 354
+ D+ L+ F+AG + S L + + +L+R P ++ + Q EV V+ GS
Sbjct: 236 E--GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVI---GS 290
Query: 355 GR-VEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAI 413
R ++ + +L+Y+ V+KES+RL+P R ++ ++G +P T + + + +
Sbjct: 291 KRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVM 350
Query: 414 GRDPKLFTNPHDFIPERF 431
GR F +P F P+RF
Sbjct: 351 GRMDTYFEDPLTFNPDRF 368
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 162/385 (42%), Gaps = 31/385 (8%)
Query: 60 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPA 119
KS L++ GP+F + G VV+ E+ K+ L + F+ R A+ + G
Sbjct: 35 KSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHFPLAERANRG-F 93
Query: 120 DVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLI 179
+ FS NG W++ R+ L++ + K +++ V +ARC +E ++
Sbjct: 94 GIVFS-NGKRWKEIRRF---SLMTLRNFGMGKRSIEDRVQE-----EARCLVE-ELRKTK 143
Query: 180 FAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWV-----W 234
+ C F L + ++ Y F+ + E L + W+ +
Sbjct: 144 ASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFLNLMEKLNE-NIRIVSTPWIQICNNF 202
Query: 235 PGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFID--VLRRVQK 292
P + + K +NL +I +K + ++ + ++ DFID +++ ++
Sbjct: 203 PTIIDYFPGTHNKLLKNLAFMESDILEKVKEHQESMD-----INNPRDFIDCFLIKMEKE 257
Query: 293 SDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTAS 352
+ T +NL+ +D+ AG + ++ TL + + L +HP V K QEE+ VV +
Sbjct: 258 KQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRN 317
Query: 353 GSGRVEENHIHQLKYMKAVIKESMR---LHPVNLLIPRESSDKCTLEGYEIPAKTRIFVN 409
S +++ + Y AV+ E R L P +L P + Y IP T I +
Sbjct: 318 RSPCMQDR--GHMPYTDAVVHEVQRYIDLIPTSL--PHAVTCDVKFRNYLIPKGTTILTS 373
Query: 410 NHAIGRDPKLFTNPHDFIPERFQQE 434
++ D K F NP F P F E
Sbjct: 374 LTSVLHDNKEFPNPEMFDPRHFLDE 398
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 16/171 (9%)
Query: 277 LHGNEDFIDVLRRV--QKSDDLDVPL---TDDNLMAI----VSDMFVAGVDPST----AT 323
LH D I RR QK DDL L DDN I + D VA + P + +T
Sbjct: 223 LHLLVDEIIAERRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIAST 282
Query: 324 LEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNL 383
+ W++ LA HP + ++EV +V +G V + +L++ VI E+MRL P
Sbjct: 283 IMWLLQALADHPEHADRIRDEVEAV---TGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVW 339
Query: 384 LIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQE 434
++ R + + L GY IPA I + +AI RDPK + + +F P+R+ E
Sbjct: 340 VLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPE 390
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
+ D +DVL V K++ + D + + M AG S+ T W + +L RH
Sbjct: 222 DRDMLDVLIAV-KAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 340 KAQEEVRSVVTASGSGRVEENH-IHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGY 398
+E+ + G GR H + Q+ ++ V+KE++RLHP +++ R + + ++G+
Sbjct: 281 AVIDELDELY---GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH 337
Query: 399 EIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQ--EEDI 437
I + + R P+ F +PHDF+P R++Q +ED+
Sbjct: 338 RIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDL 378
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
+ D +DVL V K++ + D + + M AG S+ T W + +L RH
Sbjct: 222 DRDMLDVLIAV-KAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 340 KAQEEVRSVVTASGSGRVEENH-IHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGY 398
+E+ + G GR H + Q+ ++ V+KE++RLHP +++ R + + ++G+
Sbjct: 281 AVIDELDELY---GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH 337
Query: 399 EIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQ--EEDI 437
I + + R P+ F +PHDF+P R++Q +ED+
Sbjct: 338 RIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDL 378
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
+ D +DVL V K++ + D + + M AG S+ T W + +L RH
Sbjct: 222 DRDMLDVLIAV-KAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 340 KAQEEVRSVVTASGSGRVEENH-IHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGY 398
+E+ + G GR H + Q+ ++ V+KE++RLHP +++ R + + ++G+
Sbjct: 281 AVIDELDELY---GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH 337
Query: 399 EIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQ--EEDI 437
I + + R P+ F +PHDF+P R++Q +ED+
Sbjct: 338 RIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDL 378
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
+ D +DVL V K++ + D + + M AG S+ T W + +L RH
Sbjct: 222 DRDMLDVLIAV-KAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 340 KAQEEVRSVVTASGSGRVEENH-IHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGY 398
+E+ + G GR H + Q+ ++ V+KE++RLHP +++ R + + ++G+
Sbjct: 281 AVIDELDELY---GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH 337
Query: 399 EIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQ--EEDI 437
I + + R P+ F +PHDF+P R++Q +ED+
Sbjct: 338 RIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDL 378
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 282 DFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKA 341
DF L +K DL T +N+ + +M +A D + +L +++ +A+HP V +
Sbjct: 277 DFATELILAEKRGDL----TRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAI 332
Query: 342 QEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIP 401
+E+++V+ G ++ + I +LK M+ I ESMR PV L+ R++ + ++GY +
Sbjct: 333 IKEIQTVI---GERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVK 389
Query: 402 AKTRIFVNNHAIGRDPKL--FTNPHDFIPERFQQ 433
T I +N IGR +L F P++F E F +
Sbjct: 390 KGTNIILN---IGRMHRLEFFPKPNEFTLENFAK 420
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 14/221 (6%)
Query: 215 EVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGA 274
+V +L G + W+ PGWL P + R D + KR+Q
Sbjct: 174 KVAQLYADLDGGFSHAAWLLPGWLP--LPSFRRRDRAHREIKDIFYKAIQKRRQ------ 225
Query: 275 FLLHGNEDFIDVLRRVQKSDDLD-VPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLAR 333
E D+L+ + + D PLTDD + ++ + +AG S+ T W+ LAR
Sbjct: 226 ----SQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLAR 281
Query: 334 HPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKC 393
+ KK E ++V + + + L + IKE++RL P +++ R +
Sbjct: 282 DKTLQKKCYLEQKTVC-GENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQ 340
Query: 394 TLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQE 434
T+ GY IP ++ V+ R + DF P+R+ Q+
Sbjct: 341 TVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD 381
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 155/386 (40%), Gaps = 39/386 (10%)
Query: 57 KPHKSFAKLAEKLGPIFYIQL-GRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVS 115
KP ++ K+A++LG IF + GRV +SS+ L K+ D+ + + K+V
Sbjct: 25 KPVQALMKIADELGEIFKFEAPGRV-TRYISSQRLVKEAC---DESRFDKNLSQARKFVR 80
Query: 116 --VGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET 173
G T + W++AR I + L +++D V +
Sbjct: 81 DFAGDGLATSWTHEKNWKKARNILLPRLSQQAMKGYHAMMVDIAVQLVQKWERLNSDEHI 140
Query: 174 DMSDLIFAFCTDFFCLAAFGVR---FMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFS 230
++ + + D L F R F D Q ++ S+ ++E++ +
Sbjct: 141 EVPEDMTRLTLDTIGLCGFNYRINSFYRD----QPHPFITSMVRALDEVMNKLQRANPDD 196
Query: 231 EWVWPGWLTGYTPRVIKGSRNLLN-AVDEIF-DKTSKRKQPLGTGAFLLHGNEDFIDVLR 288
P + R + ++N VD+I D+ + +Q +LHG
Sbjct: 197 ----PAY--DENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHG--------- 241
Query: 289 RVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSV 348
K + PL D+N+ + +AG + ++ L + + L ++P V++KA EE V
Sbjct: 242 ---KDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARV 298
Query: 349 VTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIF 407
+ + QLKY+ V+ E++R+ P + + L G Y + +
Sbjct: 299 LVDPVPSY---KQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELM 355
Query: 408 VNNHAIGRDPKLFTNP-HDFIPERFQ 432
V + RD ++ + +F PERF+
Sbjct: 356 VLIPQLHRDKTVWGDDVEEFRPERFE 381
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 323 TLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVN 382
TL+WI LA + + EE+R + + G G V I Q+ K+V+ ES+R+ P
Sbjct: 288 TLKWI--GLAGE-NLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPV 344
Query: 383 LLIPRESSDKCTLEG----YEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERF 431
++ T+E +E+ +F +DPK+F P +++P+RF
Sbjct: 345 PPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRF 397
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 145/369 (39%), Gaps = 40/369 (10%)
Query: 64 KLAEKLGPIFYIQL-GRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPADVT 122
K ++ GPIF +L G+ V+ S LA + L T +Q LS + + +GP +
Sbjct: 38 KRQQQFGPIFKTRLFGK--NVIFISGALANRFLFTKEQETFQATWPLSTR-ILLGPNALA 94
Query: 123 FSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAF 182
+ G R RKI L P+ ++S+ +D V ++ + +++I+
Sbjct: 95 -TQMGEIHRSRRKILYQAFL-PRTLDSYLPKMDGIVQGYLEQW-------GKANEVIWYP 145
Query: 183 CTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYT 242
FM G+K +F E + G F P L G +
Sbjct: 146 QLRRMTFDVAATLFM-----GEKVSQNPQLFPWFETYIQGL----FSLPIPLPNTLFGKS 196
Query: 243 PRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTD 302
R +R LL A E K +++ P ED + +L + DD + PL+
Sbjct: 197 QR----ARALLLAELEKIIKARQQQPP---------SEEDALGIL--LAARDDNNQPLSL 241
Query: 303 DNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHI 362
L + + AG + T+ L L +H + ++ ++E + S + +
Sbjct: 242 PELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQL---SQELTAETL 298
Query: 363 HQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTN 422
++ Y+ V++E +RL P RE C +G+ P + DP L+ +
Sbjct: 299 KKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPD 358
Query: 423 PHDFIPERF 431
P F PERF
Sbjct: 359 PEKFDPERF 367
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 153/383 (39%), Gaps = 33/383 (8%)
Query: 57 KPHKSFAKLAEKLGPIFYIQL-GRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVS 115
KP ++ K+A++LG IF + GRV +SS+ L K+ D+ + + K+V
Sbjct: 30 KPVQALMKIADELGEIFKFEAPGRV-TRYLSSQRLIKEAC---DESRFDKNLSQALKFVR 85
Query: 116 VGPADVTFSP--NGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET 173
D F+ + W++A I + +++D V +
Sbjct: 86 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHI 145
Query: 174 DMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWV 233
++ + + D L F RF + Q ++ S+ ++E + +
Sbjct: 146 EVPEDMTRLTLDTIGLCGFNYRFNSFYRD-QPHPFITSMVRALDEAMNKLQRTNPDD--- 201
Query: 234 WPGWLTGYTPRVIKGSRNLLN-AVDEIF-DKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQ 291
P + R + ++N VD+I D+ + +Q +LHG
Sbjct: 202 -PAY--DENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHG------------ 246
Query: 292 KSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTA 351
K + PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 247 KDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVD 306
Query: 352 SGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNN 410
+ QLKY+ V+ E++RL P + + L G Y + I V
Sbjct: 307 PVPSY---KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLI 363
Query: 411 HAIGRDPKLFTNP-HDFIPERFQ 432
+ RD ++ + +F PERF+
Sbjct: 364 PQLHRDKTIWGDDVEEFRPERFE 386
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 30/149 (20%)
Query: 288 RRVQKSDDL----------DVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRV 337
RRV DL + L+D +++A++ ++ +A +P+ TL ++ L +P
Sbjct: 232 RRVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQ 291
Query: 338 MKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG 397
M + RS+V + I E++R P LIPR+ S + G
Sbjct: 292 MNDVLAD-RSLVPRA-------------------IAETLRYKPPVQLIPRQLSQDTVVGG 331
Query: 398 YEIPAKTRIFVNNHAIGRDPKLFTNPHDF 426
EI T +F A RDP+ F P F
Sbjct: 332 MEIKKDTIVFCMIGAANRDPEAFEQPDVF 360
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 251 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 308
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + + L G Y + + V + RD
Sbjct: 309 -KQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 367
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 368 TIWGDDVEEFRPERFE 383
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 249 PLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 306
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 307 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 366 TIWGDDVEEFRPERFE 381
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 251 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 308
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 309 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 367
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 368 TIWGDDVEEFRPERFE 383
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 249 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 306
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 307 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 366 TIWGDDVEEFRPERFE 381
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 249 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 306
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 307 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 366 TIWGDDVEEFRPERFE 381
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 336 RVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSD--- 391
+V + EE+RSV+ ++G G + I +++ K+V+ E +R P V R D
Sbjct: 316 QVHNRLAEEIRSVIKSNG-GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVI 374
Query: 392 KCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQEE 435
+ +++ A ++ RDPK+F +F+PERF EE
Sbjct: 375 ESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEE 418
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 336 RVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSD--- 391
+V + EE+RSV+ ++G G + I +++ K+V+ E +R P V R D
Sbjct: 316 QVHNRLAEEIRSVIKSNG-GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVI 374
Query: 392 KCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQEE 435
+ +++ A ++ RDPK+F +F+PERF EE
Sbjct: 375 ESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEE 418
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + AG + ++ L + + L ++P V++KA EE V+
Sbjct: 249 PLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 306
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 307 -KQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 366 TIWGDDVEEFRPERFE 381
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 249 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 306
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 307 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 366 TIWGDDVEEFRPERFE 381
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 251 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 308
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 309 -KQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 367
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 368 TIWGDDVEEFRPERFE 383
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + +AG + ++ L + + L ++P V++KA EE V+
Sbjct: 249 PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 306
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 307 -KQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 366 TIWGDDVEEFRPERFE 381
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + + G + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKK-AQEEVRSVVTASGSGRV 357
PL D N+ + +AG + ++ L + + L ++P V++K A+E R +V S +
Sbjct: 248 PLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVPSYK- 306
Query: 358 EENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRD 416
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 307 ---QVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRD 363
Query: 417 PKLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 364 KTIWGDDVEEFRPERFE 380
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + + G + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + + G + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + + G + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + + G + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + + G + ++ L + + L ++P V++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + AG + ++ L + + L ++P ++KA EE V+
Sbjct: 249 PLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSH-- 306
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 307 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 366 TVWGDDVEEFRPERFE 381
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Query: 299 PLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE 358
PL D+N+ + AG + ++ L + + L ++P ++KA EE V+
Sbjct: 248 PLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSY-- 305
Query: 359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG-YEIPAKTRIFVNNHAIGRDP 417
+ QLKY+ V+ E++RL P + + L G Y + + V + RD
Sbjct: 306 -KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 418 KLFTNP-HDFIPERFQ 432
++ + +F PERF+
Sbjct: 365 TIWGDDVEEFRPERFE 380
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 30/149 (20%)
Query: 288 RRVQKSDDL---------DVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVM 338
R+V+ DDL D L D L +V+ + VAG + + L M D A+HP
Sbjct: 217 RKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQW 276
Query: 339 KKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEG 397
K +E + ++E +R P + + R +++ + G
Sbjct: 277 MKIKENP--------------------ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNG 316
Query: 398 YEIPAKTRIFVNNHAIGRDPKLFTNPHDF 426
IP T +F+ H RDP++F + F
Sbjct: 317 VRIPTGTPVFMCAHVAHRDPRVFADADRF 345
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 30/149 (20%)
Query: 288 RRVQKSDDL---------DVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVM 338
R+V+ DDL D L D L +V+ + VAG + + L M D A+HP
Sbjct: 207 RKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQW 266
Query: 339 KKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEG 397
K +E A ++E +R P + + R +++ + G
Sbjct: 267 MKIKENPELAPQA--------------------VEEVLRWSPTLPVTATRVAAEDFEVNG 306
Query: 398 YEIPAKTRIFVNNHAIGRDPKLFTNPHDF 426
IP T +F+ H RDP++F + F
Sbjct: 307 VRIPTGTPVFMCAHVAHRDPRVFADADRF 335
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 144/392 (36%), Gaps = 37/392 (9%)
Query: 46 IGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASR 105
+GH+ F K+ P K +K G IF + + VV + H + F R
Sbjct: 15 VGHIIQFGKD--PLGFMLKAKKKYGGIFTMNICGNRITVVGD-------VHQHSKFFTPR 65
Query: 106 PSILSAK-----YVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNR 160
ILS + V V V ++ P R+ EL K N F + EV +
Sbjct: 66 NEILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQN-FAPSIQHEVRK 124
Query: 161 FMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELL 220
FM + E ++ D A + C FG ED + ++ A + ++E L
Sbjct: 125 FMKANWNKDEGEINILDDCSAMIINTACQCLFG----EDLRKRLDARQFAQLLAKMESCL 180
Query: 221 TGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGN 280
F W+ L + R L + + EI K + T
Sbjct: 181 IP---AAVFLPWILKLPLP-QSYRCRDARAELQDILSEIIIAREKEEAQKDTN------T 230
Query: 281 EDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDL--ARHPRVM 338
D + L D + + M IV+ MF AG ST T W + L R+ R +
Sbjct: 231 SDLLAGLLGAVYRDGTRMSQHEVCGM-IVAAMF-AGQHTSTITTTWSLLHLMDPRNKRHL 288
Query: 339 KKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGY 398
K +E+ +N + ++ + + +ES+R P +++ R+ + Y
Sbjct: 289 AKLHQEIDEFPAQLNY----DNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKY 344
Query: 399 EIPAKTRIFVNNHAIGRDPKLFTNPHDFIPER 430
+P I + +D + F NP ++ PER
Sbjct: 345 VVPEGDIIACSPLLSHQDEEAFPNPREWNPER 376
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 23/153 (15%)
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
ED + L V++S D LT+D ++A + + +AG + + + + R P
Sbjct: 224 GEDLMSGLVAVEESGDQ---LTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQW- 279
Query: 340 KAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYE 399
+ + A GS AVI+E+MR P L+ R + D T+ +
Sbjct: 280 -------AALAADGS------------RASAVIEETMRYDPPVQLVSRYAGDDLTIGTHT 320
Query: 400 IPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQ 432
+P + + A RDP + P F P+R Q
Sbjct: 321 VPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRAQ 353
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 145/370 (39%), Gaps = 65/370 (17%)
Query: 61 SFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSI--LSAKY--VSV 116
SF + PI+ + P V+ E +LK D F R + S KY +S
Sbjct: 17 SFYDTLRAVHPIYKGSFLKYPGWYVTGYEETAAILK--DARFKVRTPLPESSTKYQDLSH 74
Query: 117 GPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMS 176
+ N P R+ R + + +P+ S++ + E V+ + +V+ + +E +S
Sbjct: 75 VQNQMMLFQNQPDHRRLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEV-IS 132
Query: 177 DLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPG 236
D FAF F +A + + +ED Q ++ AS+ + DF
Sbjct: 133 D--FAFPLASFVIA--NIIGVPEEDREQLKEWAASLIQTI----------DF-------- 170
Query: 237 WLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDL 296
T + +G+ + A+ + KRK+ H +D I +L + ++ D L
Sbjct: 171 --TRSRKALTEGNIMAVQAMAYFKELIQKRKR---------HPQQDMISMLLKGREKDKL 219
Query: 297 DVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGR 356
T++ + + +AG + + + + L +HP + K +E + TA
Sbjct: 220 ----TEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTA----- 270
Query: 357 VEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRD 416
++E +R + R +S+ + G I ++++ A RD
Sbjct: 271 ---------------VEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRD 315
Query: 417 PKLFTNPHDF 426
P +FTNP F
Sbjct: 316 PSIFTNPDVF 325
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 247 KGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLM 306
+ +R ++N + ++ ++ +R +P +D + L RVQ DD D L+ D L
Sbjct: 187 QAAREVVNFILDLVER--RRTEP----------GDDLLSALIRVQ--DDDDGRLSADELT 232
Query: 307 AIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLK 366
+I + +AG + S + + L HP + + + ++ A
Sbjct: 233 SIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNA--------------- 277
Query: 367 YMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDF 426
++E +R R ++++ + G IP + + V N A RDPK F +PH F
Sbjct: 278 -----VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 247 KGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLM 306
+ +R ++N + ++ ++ +R +P +D + L RVQ DD D L+ D L
Sbjct: 187 QAAREVVNFILDLVER--RRTEP----------GDDLLSALIRVQ--DDDDGRLSADELT 232
Query: 307 AIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLK 366
+I + +AG + S + + L HP + + + ++ A
Sbjct: 233 SIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPNA--------------- 277
Query: 367 YMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDF 426
++E +R R ++++ + G IP + + V N A RDPK F +PH F
Sbjct: 278 -----VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 247 KGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLM 306
+ +R ++N + ++ ++ +R +P +D + L RVQ DD D L+ D L
Sbjct: 186 QAAREVVNFILDLVER--RRTEP----------GDDLLSALIRVQ--DDDDGRLSADELT 231
Query: 307 AIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLK 366
+I + +AG + S + + L HP + + + ++ A
Sbjct: 232 SIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNA--------------- 276
Query: 367 YMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDF 426
++E +R R ++++ + G IP + + V N A RDPK F +PH F
Sbjct: 277 -----VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 331
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 247 KGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLM 306
+ +R ++N + ++ ++ +R +P +D + L RVQ DD D L+ D L
Sbjct: 187 QAAREVVNFILDLVER--RRTEP----------GDDLLSALIRVQ--DDDDGRLSADELT 232
Query: 307 AIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLK 366
+I + +AG + S + + L HP + + + ++ A
Sbjct: 233 SIALVLLLAGFETSVSLIGIGTYLLLTHPDQLALVRRDPSALPNA--------------- 277
Query: 367 YMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDF 426
++E +R R ++++ + G IP + + V N A RDPK F +PH F
Sbjct: 278 -----VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 247 KGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLM 306
+ +R ++N + ++ ++ +R +P +D + L RVQ DD D L+ D L
Sbjct: 186 QAAREVVNFILDLVER--RRTEP----------GDDLLSALIRVQ--DDDDGRLSADELT 231
Query: 307 AIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLK 366
+I + +AG + S + + L HP + + + ++ A
Sbjct: 232 SIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPNA--------------- 276
Query: 367 YMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDF 426
++E +R R ++++ + G IP + + V N A RDPK F +PH F
Sbjct: 277 -----VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 331
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 326 WIMTDLARHPRVMKKAQEEVRSVVTASGSG-RVEENHI-------HQLKYMKAVIKESMR 377
W + + R+P MK A EEV+ + +G +E N I + L + ++IKES+R
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 378 LHPVNLLIPRESSDKCTLE----GYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQ 433
L +L I R + + TL Y I I + + DP+++ +P F +R+
Sbjct: 339 LSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLD 397
Query: 434 E 434
E
Sbjct: 398 E 398
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 326 WIMTDLARHPRVMKKAQEEVRSVVTASGSG-RVEENHI-------HQLKYMKAVIKESMR 377
W + + R+P MK A EEV+ + +G +E N I + L + ++IKES+R
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 378 LHPVNLLIPRESSDKCTLE----GYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQ 433
L +L I R + + TL Y I I + + DP+++ +P F +R+
Sbjct: 339 LSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLD 397
Query: 434 E 434
E
Sbjct: 398 E 398
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 149/391 (38%), Gaps = 34/391 (8%)
Query: 46 IGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASR 105
+GH+ F K K K G +F I +G +V H + F+ R
Sbjct: 13 LGHIVQFGKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPH-------EHSRFFSPR 64
Query: 106 PSILSAK--YVSVGPA---DVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNR 160
ILS + Y + P V ++ P R+ EL K N F + EV +
Sbjct: 65 NEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQN-FVPAIQHEVRK 123
Query: 161 FMSRV-KARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEEL 219
FM+ K G+ + D A + C FG ED + +++ A + ++E
Sbjct: 124 FMAENWKEDEGVINLLED-CGAMIINTACQCLFG----EDLRKRLNARHFAQLLSKMESS 178
Query: 220 LTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHG 279
L F W+ L + R + L + EI K + A +
Sbjct: 179 LIP---AAVFMPWLLRLPLP-QSARCREARAELQKILGEIIVAREKEE------ASKDNN 228
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
D + L + D + L + M IV+ MF AG ST T W M L HP+ K
Sbjct: 229 TSDLLGGLLKAVYRDGTRMSLHEVCGM-IVAAMF-AGQHTSTITTSWSMLHLM-HPK-NK 284
Query: 340 KAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYE 399
K +++ + + +N + ++ + + ++ES+R P L++ R + + Y
Sbjct: 285 KWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYV 344
Query: 400 IPAKTRIFVNNHAIGRDPKLFTNPHDFIPER 430
+P I + D + F NP + PER
Sbjct: 345 VPKGDIIACSPLLSHHDEEAFPNPRLWDPER 375
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 149/391 (38%), Gaps = 34/391 (8%)
Query: 46 IGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASR 105
+GH+ F K K K G +F I +G +V H + F+ R
Sbjct: 19 LGHIVQFGKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPH-------EHSRFFSPR 70
Query: 106 PSILSAK--YVSVGPA---DVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNR 160
ILS + Y + P V ++ P R+ EL K N F + EV +
Sbjct: 71 NEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQN-FVPAIQHEVRK 129
Query: 161 FMSRV-KARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEEL 219
FM+ K G+ + D A + C FG ED + +++ A + ++E
Sbjct: 130 FMAENWKEDEGVINLLED-CGAMIINTACQCLFG----EDLRKRLNARHFAQLLSKMESS 184
Query: 220 LTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHG 279
L F W+ L + R + L + EI K + A +
Sbjct: 185 LIP---AAVFMPWLLRLPLP-QSARCREARAELQKILGEIIVAREKEE------ASKDNN 234
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
D + L + D + L + M IV+ MF AG ST T W M L HP+ K
Sbjct: 235 TSDLLGGLLKAVYRDGTRMSLHEVCGM-IVAAMF-AGQHTSTITTSWSMLHLM-HPK-NK 290
Query: 340 KAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYE 399
K +++ + + +N + ++ + + ++ES+R P L++ R + + Y
Sbjct: 291 KWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYV 350
Query: 400 IPAKTRIFVNNHAIGRDPKLFTNPHDFIPER 430
+P I + D + F NP + PER
Sbjct: 351 VPKGDIIACSPLLSHHDEEAFPNPRLWDPER 381
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 149/391 (38%), Gaps = 34/391 (8%)
Query: 46 IGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASR 105
+GH+ F K K K G +F I +G +V H + F+ R
Sbjct: 28 LGHIVQFGKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPH-------EHSRFFSPR 79
Query: 106 PSILSAK--YVSVGPA---DVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNR 160
ILS + Y + P V ++ P R+ EL K N F + EV +
Sbjct: 80 NEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQN-FVPAIQHEVRK 138
Query: 161 FMSRV-KARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEEL 219
FM+ K G+ + D A + C FG ED + +++ A + ++E
Sbjct: 139 FMAENWKEDEGVINLLED-CGAMIINTACQCLFG----EDLRKRLNARHFAQLLSKMESS 193
Query: 220 LTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHG 279
L F W+ L + R + L + EI K + A +
Sbjct: 194 LIP---AAVFMPWLLRLPLP-QSARCREARAELQKILGEIIVAREKEE------ASKDNN 243
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
D + L + D + L + M IV+ MF AG ST T W M L HP+ K
Sbjct: 244 TSDLLGGLLKAVYRDGTRMSLHEVCGM-IVAAMF-AGQHTSTITTSWSMLHLM-HPK-NK 299
Query: 340 KAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYE 399
K +++ + + +N + ++ + + ++ES+R P L++ R + + Y
Sbjct: 300 KWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYV 359
Query: 400 IPAKTRIFVNNHAIGRDPKLFTNPHDFIPER 430
+P I + D + F NP + PER
Sbjct: 360 VPKGDIIACSPLLSHHDEEAFPNPRLWDPER 390
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 247 KGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLM 306
+ +R ++N + ++ ++ +R +P +D + L VQ DD D L+ D L
Sbjct: 186 QAAREVVNFILDLVER--RRTEP----------GDDLLSALISVQ--DDDDGRLSADELT 231
Query: 307 AIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLK 366
+I + +AG + S + + L HP + ++V A S
Sbjct: 232 SIALVLLLAGFEASVSLIGIGTYLLLTHPDQL--------ALVRADPSA----------- 272
Query: 367 YMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDF 426
+ ++E +R R ++++ + G IP + + V N A RDP F +PH F
Sbjct: 273 -LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRF 331
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 31/180 (17%)
Query: 257 DEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDL------DVPLTDDNLMAIVS 310
DE+FD + R+ + D + RR + DDL D LT D+++
Sbjct: 195 DELFDGMTPRQAHTEILVYF-----DELITARRKEPGDDLVSTLVTDDDLTIDDVLLNCD 249
Query: 311 DMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKA 370
++ + G + + + + LA P ++ ++ GS V+
Sbjct: 250 NVLIGGNETTRHAITGAVHALATVPGLLTALRD---------GSADVD-----------T 289
Query: 371 VIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPER 430
V++E +R + + R ++ T+ G ++P+ T + A RDP F +P F+P R
Sbjct: 290 VVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR 349
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 21/147 (14%)
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
ED + L V+ SD+ LT + L+ + + VAG + + + M L HP +
Sbjct: 230 GEDLLSAL--VRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLA 287
Query: 340 KAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYE 399
+ ++ + G VEE L+Y V + R P E D L+G
Sbjct: 288 ALRADMTLL-----DGAVEE----MLRYEGPVESATYRF-------PVEPVD---LDGTV 328
Query: 400 IPAKTRIFVNNHAIGRDPKLFTNPHDF 426
IPA + V R P+ F +PH F
Sbjct: 329 IPAGDTVLVVLADAHRTPERFPDPHRF 355
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 21/147 (14%)
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
ED + L V+ SD+ LT + L+ + + VAG + + + M L HP +
Sbjct: 230 GEDLLSAL--VRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLA 287
Query: 340 KAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYE 399
+ ++ + G VEE L+Y V + R P E D L+G
Sbjct: 288 ALRADMTLL-----DGAVEE----MLRYEGPVESATYRF-------PVEPVD---LDGTV 328
Query: 400 IPAKTRIFVNNHAIGRDPKLFTNPHDF 426
IPA + V R P+ F +PH F
Sbjct: 329 IPAGDTVLVVLADAHRTPERFPDPHRF 355
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 21/147 (14%)
Query: 280 NEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMK 339
ED + L V+ SD+ LT + L+ + + VAG + + + M L HP +
Sbjct: 230 GEDLLSAL--VRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLA 287
Query: 340 KAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYE 399
+ ++ + G VEE L+Y V + R P E D L+G
Sbjct: 288 ALRADMTLL-----DGAVEE----MLRYEGPVESATYRF-------PVEPVD---LDGTV 328
Query: 400 IPAKTRIFVNNHAIGRDPKLFTNPHDF 426
IPA + V R P+ F +PH F
Sbjct: 329 IPAGDTVLVVLADAHRTPERFPDPHRF 355
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 372 IKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERF 431
++E R +P + E T + ++ + DP+L+ +P +F PERF
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
Query: 432 QQEED 436
+ E+
Sbjct: 340 AEREE 344
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 20/132 (15%)
Query: 292 KSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTA 351
++ D PL+ D ++ + AG + +T L + L H V+ +E+R+ +
Sbjct: 231 RARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVL----DELRTTPES 286
Query: 352 SGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNH 411
+ A ++E MR P + R + + L ++IP +R+
Sbjct: 287 T----------------PAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLG 330
Query: 412 AIGRDPKLFTNP 423
+ RDP F +P
Sbjct: 331 SANRDPARFPDP 342
>pdb|2ZJT|A Chain A, Crystal Structure Of Dna Gyrase B' Domain Sheds Lights On
The Mechanism For T-Segment Navigation
pdb|2ZJT|B Chain B, Crystal Structure Of Dna Gyrase B' Domain Sheds Lights On
The Mechanism For T-Segment Navigation
Length = 247
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 327 IMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVI 372
I + AR RV+K EV++++TA G+G +E I +L+Y K V+
Sbjct: 45 INVEKARIDRVLKNT--EVQAIITALGTGIHDEFDIGKLRYHKIVL 88
>pdb|3IG0|A Chain A, Crystal Structure Of The Second Part Of The Mycobacterium
Tuberculosis Dna Gyrase Reaction Core: The Toprim Domain
At 2.1 A Resolution
pdb|3M4I|A Chain A, Crystal Structure Of The Second Part Of The Mycobacterium
Tuberculosis Dna Gyrase Reaction Core: The Toprim Domain
At 1.95 A Resolution
Length = 242
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 327 IMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVI 372
I + AR RV+K EV++++TA G+G +E I +L+Y K V+
Sbjct: 53 INVEKARIDRVLKNT--EVQAIITALGTGIHDEFDIGKLRYHKIVL 96
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 22/130 (16%)
Query: 290 VQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVV 349
+Q S++ D LTD +++ + M AG + + + + + +L+ HP E R++V
Sbjct: 218 IQASENGD-HLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHP--------EQRALV 268
Query: 350 TASGSGRVEENHIHQLKYMKAVIKESMRLH-PVNLLIPRESSDKCTLEGYEIPAKTRIFV 408
SG E AV++E++R P + ++ R +++ + IPA + V
Sbjct: 269 L---SGEAE---------WSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIV 316
Query: 409 NNHAIGRDPK 418
+ A+GRD +
Sbjct: 317 SYGALGRDER 326
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 74/195 (37%), Gaps = 35/195 (17%)
Query: 240 GYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHG-------NEDFIDVLRRVQK 292
G PRV + ++ L+ +V E G LLHG N DVL + +
Sbjct: 186 GLVPRVDEETKTLVASVTE--------------GLALLHGVLDERRRNPLENDVLTMLLQ 231
Query: 293 SDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPR----------VMKKAQ 342
++ L+ L+A+V + AG D + + + + +L R P +M+ A
Sbjct: 232 AEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNAL 291
Query: 343 EEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPA 402
+EV G V L+Y A IK+ V LLIP D ++
Sbjct: 292 DEVLRFENILRIGTVRFAR-QDLEYCGASIKKG---EMVFLLIPSALRDGTVFSRPDVFD 347
Query: 403 KTRIFVNNHAIGRDP 417
R + A GR P
Sbjct: 348 VRRDTSASLAYGRGP 362
>pdb|1HQM|A Chain A, Crystal Structure Of Thermus Aquaticus Core Rna
Polymerase- Includes Complete Structure With Side-Chains
(Except For Disordered Regions)-Further Refined From
Original Deposition-Contains Additional Sequence
Information
pdb|1HQM|B Chain B, Crystal Structure Of Thermus Aquaticus Core Rna
Polymerase- Includes Complete Structure With Side-Chains
(Except For Disordered Regions)-Further Refined From
Original Deposition-Contains Additional Sequence
Information
Length = 313
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 288 RRVQKSDDLDVPLTDDNLMA-IVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVR 346
+R +DLD+PL + L ++ + G++ A L + DL P + +++ EE+R
Sbjct: 242 KRESAEEDLDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLRNIPGIGERSLEEIR 301
Query: 347 SVVTASG 353
+ G
Sbjct: 302 QALAKKG 308
>pdb|1I6V|A Chain A, Thermus Aquaticus Core Rna Polymerase-Rifampicin Complex
pdb|1I6V|B Chain B, Thermus Aquaticus Core Rna Polymerase-Rifampicin Complex
Length = 314
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 288 RRVQKSDDLDVPLTDDNLMA-IVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVR 346
+R +DLD+PL + L ++ + G++ A L + DL P + +++ EE+R
Sbjct: 243 KRESAEEDLDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLRNIPGIGERSLEEIR 302
Query: 347 SVVTASG 353
+ G
Sbjct: 303 QALAKKG 309
>pdb|1L9U|A Chain A, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9U|B Chain B, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9U|J Chain J, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9U|K Chain K, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9Z|A Chain A, Thermus Aquaticus Rna Polymerase HoloenzymeFORK-Junction
Promoter Dna Complex At 6.5 A Resolution
pdb|1L9Z|B Chain B, Thermus Aquaticus Rna Polymerase HoloenzymeFORK-Junction
Promoter Dna Complex At 6.5 A Resolution
pdb|1YNJ|A Chain A, Taq Rna Polymerase-Sorangicin Complex
pdb|1YNJ|B Chain B, Taq Rna Polymerase-Sorangicin Complex
pdb|1YNN|A Chain A, Taq Rna Polymerase-rifampicin Complex
pdb|1YNN|B Chain B, Taq Rna Polymerase-rifampicin Complex
pdb|2GHO|A Chain A, Recombinant Thermus Aquaticus Rna Polymerase For
Structural Studies
pdb|2GHO|B Chain B, Recombinant Thermus Aquaticus Rna Polymerase For
Structural Studies
Length = 314
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 288 RRVQKSDDLDVPLTDDNLMA-IVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVR 346
+R +DLD+PL + L ++ + G++ A L + DL P + +++ EE+R
Sbjct: 243 KRESAEEDLDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLRNIPGIGERSLEEIR 302
Query: 347 SVVTASG 353
+ G
Sbjct: 303 QALAKKG 309
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 360 NHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKL 419
+++ + +KAV +E++R P + R + +K + I + V + RD ++
Sbjct: 233 DYVREKGALKAV-EEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEV 291
Query: 420 FTNPHDFIPER 430
F +P FIP+R
Sbjct: 292 FKDPDSFIPDR 302
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 361 HIHQLKYMKA-------VIKESMRLH-PVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHA 412
H QL +KA ++E R H V L I R + + + + A I +N +
Sbjct: 257 HPDQLAQLKANPSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQS 316
Query: 413 IGRDPKLFTNPHDF 426
RD ++F NP +F
Sbjct: 317 ANRDEEVFENPDEF 330
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 240 GYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHG-------NEDFIDVLRRVQK 292
G PRV + ++ L+ +V E G LLHG N DVL + +
Sbjct: 186 GLVPRVDEETKTLVASVTE--------------GLALLHGVLDERRRNPLENDVLTMLLQ 231
Query: 293 SDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEE 344
++ L+ L+A+V + AG D + + + + +L R P ++ + E
Sbjct: 232 AEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 361 HIHQLKYMKA-------VIKESMRLH-PVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHA 412
H QL +KA ++E R H V L I R + + + + A I +N +
Sbjct: 258 HPDQLAQLKANPSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQS 317
Query: 413 IGRDPKLFTNPHDF 426
RD ++F NP +F
Sbjct: 318 ANRDEEVFENPDEF 331
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 361 HIHQLKYMKA-------VIKESMRLHPVNLL-IPRESSDKCTLEGYEIPAKTRIFVNNHA 412
H QL +KA ++E R H + L I R + + + + A I +N +
Sbjct: 257 HPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQS 316
Query: 413 IGRDPKLFTNPHDF 426
RD ++F NP +F
Sbjct: 317 ANRDEEVFENPDEF 330
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 361 HIHQLKYMKA-------VIKESMRLHPVNLL-IPRESSDKCTLEGYEIPAKTRIFVNNHA 412
H QL +KA ++E R H + L I R + + + + A I +N +
Sbjct: 257 HPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQS 316
Query: 413 IGRDPKLFTNPHDF 426
RD ++F NP +F
Sbjct: 317 ANRDEEVFENPDEF 330
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 361 HIHQLKYMKA-------VIKESMRLHPVNLL-IPRESSDKCTLEGYEIPAKTRIFVNNHA 412
H QL +KA ++E R H + L I R + + + + A I +N +
Sbjct: 258 HPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQS 317
Query: 413 IGRDPKLFTNPHDF 426
RD ++F NP +F
Sbjct: 318 ANRDEEVFENPDEF 331
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 361 HIHQLKYMKA-------VIKESMRLHPVNLL-IPRESSDKCTLEGYEIPAKTRIFVNNHA 412
H QL +KA ++E R H + L I R + + + + A I +N +
Sbjct: 257 HPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQS 316
Query: 413 IGRDPKLFTNPHDF 426
RD ++F NP +F
Sbjct: 317 ANRDEEVFENPDEF 330
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 361 HIHQLKYMKA-------VIKESMRLHPVNLL-IPRESSDKCTLEGYEIPAKTRIFVNNHA 412
H QL +KA ++E R H + L I R + + + + A I +N +
Sbjct: 259 HPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQS 318
Query: 413 IGRDPKLFTNPHDF 426
RD ++F NP +F
Sbjct: 319 ANRDEEVFENPDEF 332
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 361 HIHQLKYMKA-------VIKESMRLHPVNLL-IPRESSDKCTLEGYEIPAKTRIFVNNHA 412
H QL +KA ++E R H + L I R + + + + A I +N +
Sbjct: 258 HPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQS 317
Query: 413 IGRDPKLFTNPHDF 426
RD ++F NP +F
Sbjct: 318 ANRDEEVFENPDEF 331
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 361 HIHQLKYMKA-------VIKESMRLHPVNLL-IPRESSDKCTLEGYEIPAKTRIFVNNHA 412
H QL +KA ++E R H + L I R + + + + A I +N +
Sbjct: 257 HPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQS 316
Query: 413 IGRDPKLFTNPHDF 426
RD ++F NP +F
Sbjct: 317 ANRDEEVFENPDEF 330
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 361 HIHQLKYMKA-------VIKESMRLHPVNLL-IPRESSDKCTLEGYEIPAKTRIFVNNHA 412
H QL +KA ++E R H + L I R + + + + A I +N +
Sbjct: 257 HPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQS 316
Query: 413 IGRDPKLFTNPHDF 426
RD ++F NP +F
Sbjct: 317 ANRDEEVFENPDEF 330
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,362,182
Number of Sequences: 62578
Number of extensions: 563096
Number of successful extensions: 1417
Number of sequences better than 100.0: 134
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1150
Number of HSP's gapped (non-prelim): 186
length of query: 521
length of database: 14,973,337
effective HSP length: 103
effective length of query: 418
effective length of database: 8,527,803
effective search space: 3564621654
effective search space used: 3564621654
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)