Query         009976
Match_columns 521
No_of_seqs    124 out of 1728
Neff          9.7 
Searched_HMMs 46136
Date          Thu Mar 28 19:34:13 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009976.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009976hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.6E-82 5.6E-87  644.3  46.3  460   34-515    25-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 2.7E-76 5.8E-81  591.3  42.7  457   37-515    33-499 (499)
  3 PLN03234 cytochrome P450 83B1; 100.0   5E-75 1.1E-79  609.0  48.1  468   34-514    27-498 (499)
  4 PLN02183 ferulate 5-hydroxylas 100.0 1.2E-74 2.7E-79  606.9  47.5  467   35-514    36-511 (516)
  5 PLN02687 flavonoid 3'-monooxyg 100.0   3E-74 6.5E-79  604.2  49.4  502    1-515     1-509 (517)
  6 PLN02971 tryptophan N-hydroxyl 100.0 5.3E-74 1.2E-78  604.4  48.8  470   34-516    56-535 (543)
  7 PLN03112 cytochrome P450 famil 100.0 2.7E-73   6E-78  597.6  49.8  477   31-518    28-511 (514)
  8 PLN02966 cytochrome P450 83A1  100.0 5.2E-73 1.1E-77  593.1  48.6  468   35-515    29-500 (502)
  9 PLN00110 flavonoid 3',5'-hydro 100.0 2.6E-72 5.7E-77  586.3  47.1  464   34-515    30-497 (504)
 10 PLN00168 Cytochrome P450; Prov 100.0 2.8E-71 6.1E-76  581.9  48.8  472   34-515    34-517 (519)
 11 PLN02394 trans-cinnamate 4-mon 100.0 2.2E-71 4.8E-76  582.0  47.5  466   34-515    29-502 (503)
 12 PTZ00404 cytochrome P450; Prov 100.0 1.6E-71 3.5E-76  580.0  43.5  449   34-514    28-482 (482)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 1.4E-71   3E-76  576.6  35.5  459   33-515    33-496 (497)
 14 PLN02290 cytokinin trans-hydro 100.0 9.3E-71   2E-75  578.7  40.3  453   35-516    42-516 (516)
 15 PLN02500 cytochrome P450 90B1  100.0 6.9E-70 1.5E-74  568.2  43.4  444   31-513    34-488 (490)
 16 PLN03018 homomethionine N-hydr 100.0   2E-68 4.4E-73  558.3  48.9  471   33-514    38-523 (534)
 17 PLN02655 ent-kaurene oxidase   100.0 6.3E-69 1.4E-73  557.1  42.4  453   37-515     1-464 (466)
 18 KOG0159 Cytochrome P450 CYP11/ 100.0 1.7E-68 3.8E-73  522.5  35.5  455   36-515    51-518 (519)
 19 PLN02169 fatty acid (omega-1)- 100.0 1.4E-67 3.1E-72  549.6  42.9  453   37-514    33-499 (500)
 20 PLN02196 abscisic acid 8'-hydr 100.0 1.3E-67 2.9E-72  546.3  40.8  431   31-514    31-462 (463)
 21 PLN02774 brassinosteroid-6-oxi 100.0 1.9E-67   4E-72  545.6  41.2  429   35-512    31-461 (463)
 22 PLN03195 fatty acid omega-hydr 100.0 1.7E-67 3.7E-72  553.7  41.4  458   37-515    32-516 (516)
 23 PLN02738 carotene beta-ring hy 100.0 2.8E-67 6.1E-72  555.8  42.1  450   46-518   142-598 (633)
 24 PF00067 p450:  Cytochrome P450 100.0 4.8E-68   1E-72  551.1  31.3  432   37-486     1-441 (463)
 25 PLN02302 ent-kaurenoic acid ox 100.0 9.6E-66 2.1E-70  538.6  41.9  445   30-515    37-488 (490)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 1.4E-65 3.1E-70  530.3  41.0  439   33-514     5-449 (452)
 27 PLN02936 epsilon-ring hydroxyl 100.0   4E-65 8.7E-70  531.1  40.8  460   36-518    13-485 (489)
 28 PLN02987 Cytochrome P450, fami 100.0 3.6E-64 7.7E-69  519.5  41.3  436   33-514    28-468 (472)
 29 PLN02426 cytochrome P450, fami 100.0 2.3E-63   5E-68  517.4  41.3  441   43-515    49-500 (502)
 30 KOG0684 Cytochrome P450 [Secon 100.0 2.3E-58 4.9E-63  440.3  36.6  443   37-515    34-485 (486)
 31 PLN02648 allene oxide synthase 100.0 2.1E-54 4.5E-59  443.9  31.3  407   33-486    15-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 4.8E-50   1E-54  406.7  33.7  378   62-514    28-410 (411)
 33 COG2101 SPT15 TATA-box binding  51.6     4.7  0.0001   34.8  -0.1   35  425-461    36-70  (185)
 34 PF12554 MOZART1:  Mitotic-spin  47.2      55  0.0012   21.9   4.4   42  304-345     6-47  (48)
 35 PF09201 SRX:  SRX;  InterPro:   43.4      19  0.0004   29.9   2.1   21  456-476    19-39  (148)
 36 PF05952 ComX:  Bacillus compet  41.7      26 0.00056   24.4   2.3   19  326-344     4-22  (57)
 37 CHL00145 psaD photosystem I su  31.0 1.5E+02  0.0033   24.2   5.3   72  447-518    42-139 (139)
 38 KOG3506 40S ribosomal protein   30.6      22 0.00049   24.2   0.6   11  448-458    12-22  (56)
 39 PF14129 DUF4296:  Domain of un  28.5 2.6E+02  0.0056   21.2   6.3   49  302-350    31-79  (87)
 40 COG1759 5-formaminoimidazole-4  28.5      96  0.0021   30.0   4.6   71  367-472   274-352 (361)
 41 PF12508 DUF3714:  Protein of u  28.1      41 0.00088   30.4   2.0   44  364-408    51-94  (200)
 42 cd04516 TBP_eukaryotes eukaryo  27.0      39 0.00084   29.8   1.7   56  424-481    29-86  (174)
 43 PLN00062 TATA-box-binding prot  26.5      39 0.00086   29.9   1.6   55  424-480    29-85  (179)
 44 cd04518 TBP_archaea archaeal T  26.2      18 0.00038   32.0  -0.6   36  424-461    29-64  (174)
 45 PF11227 DUF3025:  Protein of u  21.3      50  0.0011   29.9   1.3   24  407-430   187-211 (212)
 46 PRK00394 transcription factor;  20.8      45 0.00098   29.6   0.9   35  424-460    28-62  (179)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.6e-82  Score=644.29  Aligned_cols=460  Identities=41%  Similarity=0.705  Sum_probs=388.6

Q ss_pred             CCCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCcc-cccc
Q 009976           34 PSLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSI-LSAK  112 (521)
Q Consensus        34 ~~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~-~~~~  112 (521)
                      ..+||||.++|++||++++.. ...|+.+.++.++|||+|.+++|..|+|+|+|++.++|++.+++..|.+||.. ....
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~-~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGS-LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCC-CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            679999999999999999952 24899999999999999999999999999999999999999999999999972 2334


Q ss_pred             ccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhhc-CcccchHHHHHHHHHHHhhHHh
Q 009976          113 YVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARC-GLETDMSDLIFAFCTDFFCLAA  191 (521)
Q Consensus       113 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~-~~~~d~~~~~~~~~~~vi~~~~  191 (521)
                      .+.+++.+++++++|+.|+.+||+....+++.+.++++...-.++++.+++.+.+.. +.++|+...+..++.+||+..+
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHH
Confidence            456577788888899999999999999999999999988888899999999998622 2689999999999999999999


Q ss_pred             cccccccCcchhhhhHHHHHHHHHHHHHhhccccccccc-ccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCC
Q 009976          192 FGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFS-EWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPL  270 (521)
Q Consensus       192 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (521)
                      ||.++....+ .. ...+.....+.......+...+++| .+.+..+..+...+......++.++++++++++++.. ..
T Consensus       184 fG~rf~~~~~-~~-~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~  260 (489)
T KOG0156|consen  184 FGRRFEEEDE-EE-FLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD  260 (489)
T ss_pred             hCCccccCCc-hH-HHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc
Confidence            9999975321 22 1226677777777777777777777 3444334445555555556668889999998887654 11


Q ss_pred             CCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 009976          271 GTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVT  350 (521)
Q Consensus       271 ~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~  350 (521)
                       .     +. +|++|.+++..++++... +++++|...+.++++||+||||+|+.|++.+|++||++|+|+|+||+++++
T Consensus       261 -~-----~~-~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG  332 (489)
T KOG0156|consen  261 -E-----EG-RDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVG  332 (489)
T ss_pred             -C-----CC-CcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence             1     22 799999998876543222 899999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCcchhhcccchhHHHHHHHhhcCCC-CCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCC
Q 009976          351 ASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPE  429 (521)
Q Consensus       351 ~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p-~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~Pe  429 (521)
                      .  +..++.+|+.+||||+|||+|++|+|| +|..++|.+.+|+.++||.|||||.|.++.|++||||++|+||++|+||
T Consensus       333 ~--~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PE  410 (489)
T KOG0156|consen  333 K--GRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPE  410 (489)
T ss_pred             C--CCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChh
Confidence            6  334899999999999999999999999 6777899999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCeEE
Q 009976          430 RFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPLVL  509 (521)
Q Consensus       430 Rwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  509 (521)
                      ||++.+   +.+.....++|||.|+|+|+|..+|++|+.++++.|+++|+|+.+++    ++|+.+.. +++..+.++..
T Consensus       411 RFl~~~---d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~~-~~~~~~~pl~~  482 (489)
T KOG0156|consen  411 RFLDSN---DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEAG-LTLKKKKPLKA  482 (489)
T ss_pred             hhcCCc---cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCcccc-cceecCCccee
Confidence            997643   12235678999999999999999999999999999999999999865    34566664 77788889998


Q ss_pred             EecCCC
Q 009976          510 VPTGNK  515 (521)
Q Consensus       510 ~~~~~~  515 (521)
                      .+.+|.
T Consensus       483 ~~~~r~  488 (489)
T KOG0156|consen  483 VPVPRL  488 (489)
T ss_pred             eeecCC
Confidence            888874


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.7e-76  Score=591.27  Aligned_cols=457  Identities=23%  Similarity=0.371  Sum_probs=339.1

Q ss_pred             CCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCC--cccccccc
Q 009976           37 PSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRP--SILSAKYV  114 (521)
Q Consensus        37 ~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~--~~~~~~~~  114 (521)
                      .|+|.++|++||+..+.+.+.......+...++||++.++.+..|.++|+|||++++|+.+.-+.|.++.  ......- 
T Consensus        33 i~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~-  111 (499)
T KOG0158|consen   33 IPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED-  111 (499)
T ss_pred             CCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC-
Confidence            4555668999999998754433334444444559999999999999999999999999998777777732  2211110 


Q ss_pred             ccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhhcC--cccchHHHHHHHHHHHhhHHhc
Q 009976          115 SVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCG--LETDMSDLIFAFCTDFFCLAAF  192 (521)
Q Consensus       115 ~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~d~~~~~~~~~~~vi~~~~f  192 (521)
                       .......|...|++||+.|.. +++.|++.+++.+.+.+++.+.++++.+.+...  ..+++.+....||+|||+.++|
T Consensus       112 -~l~~~~Lf~~~g~~WK~lR~~-lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~Af  189 (499)
T KOG0158|consen  112 -PLSALNLFFLRGERWKRLRTK-LSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAF  189 (499)
T ss_pred             -cccccCchhccCchHHHHHHh-hccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhc
Confidence             111244567789999999998 579999999999999999999999999987543  4788999999999999999999


Q ss_pred             ccccccCcchhhhhHHHHHHHHHHHHH-hhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCCC
Q 009976          193 GVRFMEDEDEGQKSKYLASVFIEVEEL-LTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLG  271 (521)
Q Consensus       193 g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (521)
                      |.+.+...+..  .. +..+....... .....+.... ...++.....  .+.........+++.+++....+.++.  
T Consensus       190 G~~~~s~~d~~--~~-F~~~~~~~~~~~~~~~~l~~~~-~~~~p~l~~~--l~~~~~~~~~~~~~~~~v~~~v~~R~~--  261 (499)
T KOG0158|consen  190 GLDANSLRDPK--AE-FRRMGRRAFFLSRGLFPLKFML-IFLFPKLALP--LRVKLFPEDVTDFFRKLVNSRVEQREK--  261 (499)
T ss_pred             ccchhhhcCch--HH-HHHhhHHHHHHhhccchHhHhH-HHHhHHHHHh--hhcccChHHHHHHHHHHHHHHHHHHHh--
Confidence            99876433221  22 44333222222 1111100000 0001100000  001111122333333333333332211  


Q ss_pred             CCccccCCCchHHHHHHHhhcCC--CC--CCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 009976          272 TGAFLLHGNEDFIDVLRRVQKSD--DL--DVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRS  347 (521)
Q Consensus       272 ~~~~~~~~~~~~l~~l~~~~~~~--~~--~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~  347 (521)
                      .+    ..+.|+++.++++..++  +.  ...+|.+||+++++.|++||+||||++|++++|+||+||++|+|||+||++
T Consensus       262 ~~----~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~  337 (499)
T KOG0158|consen  262 EN----IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDE  337 (499)
T ss_pred             cC----CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence            10    34689999999887531  11  125999999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCcccc-CeeeCCCCEEEecchhhccCCCCCCCCCCC
Q 009976          348 VVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLE-GYEIPAKTRIFVNNHAIGRDPKLFTNPHDF  426 (521)
Q Consensus       348 ~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~-g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F  426 (521)
                      ++.+.+  .++++.+++|+||++||+||||+||+.+.+.|.|++|++++ ++.||||+.|.+++|++||||++||||++|
T Consensus       338 ~~~~~~--~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F  415 (499)
T KOG0158|consen  338 VLEEKE--GLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKF  415 (499)
T ss_pred             HhcccC--CCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccC
Confidence            976532  29999999999999999999999996666899999999999 999999999999999999999999999999


Q ss_pred             CCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcC
Q 009976          427 IPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVP  506 (521)
Q Consensus       427 ~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (521)
                      +||||.+.+.  + ..++.+|+|||.|||+|||++||++|+|+.|++||++|+++.++...+ + .....-+.++.|+++
T Consensus       416 ~PERF~~~~~--~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~-~-~~~~~~~~~l~pk~g  490 (499)
T KOG0158|consen  416 KPERFEEENN--K-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTII-P-LEGDPKGFTLSPKGG  490 (499)
T ss_pred             CCccCCCCcc--c-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccC-c-ccCCccceeeecCCc
Confidence            9999953322  2 346789999999999999999999999999999999999998873222 2 222223677889999


Q ss_pred             eEEEecCCC
Q 009976          507 LVLVPTGNK  515 (521)
Q Consensus       507 l~~~~~~~~  515 (521)
                      +.+++++|.
T Consensus       491 i~Lkl~~r~  499 (499)
T KOG0158|consen  491 IWLKLEPRD  499 (499)
T ss_pred             eEEEEEeCC
Confidence            999999884


No 3  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=5e-75  Score=608.96  Aligned_cols=468  Identities=39%  Similarity=0.691  Sum_probs=361.4

Q ss_pred             CCCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccccccc
Q 009976           34 PSLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKY  113 (521)
Q Consensus        34 ~~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~  113 (521)
                      ...||||+++|++||++++. ...++..+.+++++||++|++++|+.++|+++|||.+++++.++...|..++.......
T Consensus        27 ~~~pPgp~~~P~iG~~~~~~-~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~  105 (499)
T PLN03234         27 LRLPPGPKGLPIIGNLHQME-KFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQT  105 (499)
T ss_pred             CCCCcCCCCCCeeccHHhcC-CCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhh
Confidence            35678888999999998884 23566788999999999999999999999999999999999887767777664332221


Q ss_pred             cccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhhHHh
Q 009976          114 VSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFCLAA  191 (521)
Q Consensus       114 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~~  191 (521)
                      ....+....+...++.|+++||.+.+++|+++++..+.+.+++.++++++.|.+.  .+..+|+.+.+..+++|+++.++
T Consensus       106 ~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~  185 (499)
T PLN03234        106 MSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQA  185 (499)
T ss_pred             hccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHHH
Confidence            1222222334456789999999866789999999999999999999999999743  35679999999999999999999


Q ss_pred             cccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCCC
Q 009976          192 FGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLG  271 (521)
Q Consensus       192 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (521)
                      ||.+++....  ...+ +.+.................+|.+.+..++.+...+..+..+.+.+.+.+++++..+....  
T Consensus       186 fG~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--  260 (499)
T PLN03234        186 FGKRYNEYGT--EMKR-FIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP--  260 (499)
T ss_pred             hCCcccccch--hHHH-HHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc--
Confidence            9998753221  1122 3333333322222212222233222211122223445566677777777777665432211  


Q ss_pred             CCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcc
Q 009976          272 TGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTA  351 (521)
Q Consensus       272 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~  351 (521)
                      .     ...+|+++.+++..++++....++++++.+++.++++||+||||++++|++|+|++||++|+|+|+||++++++
T Consensus       261 ~-----~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~  335 (499)
T PLN03234        261 K-----QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGD  335 (499)
T ss_pred             C-----CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence            0     22468888888765433222358999999999999999999999999999999999999999999999999864


Q ss_pred             CCCCCcchhhcccchhHHHHHHHhhcCCCC-CCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCC-CCCCCCCCC
Q 009976          352 SGSGRVEENHIHQLKYMKAVIKESMRLHPV-NLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLF-TNPHDFIPE  429 (521)
Q Consensus       352 ~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~-~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~-~dP~~F~Pe  429 (521)
                        ...++++++++|||++|||+|+||++|+ +..++|.+.+|++++||.|||||.|.++.|++||||++| +||++||||
T Consensus       336 --~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~Pe  413 (499)
T PLN03234        336 --KGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPE  413 (499)
T ss_pred             --CCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCch
Confidence              3457899999999999999999999994 444579999999999999999999999999999999999 899999999


Q ss_pred             ccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCeEE
Q 009976          430 RFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPLVL  509 (521)
Q Consensus       430 Rwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  509 (521)
                      ||++..+..+.+.++..|+|||+|+|+|+|++||++|+++++|+|+++|+|+++++..++.+......+++..++.++.+
T Consensus       414 R~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (499)
T PLN03234        414 RFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVL  493 (499)
T ss_pred             hhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEE
Confidence            99753221122334678999999999999999999999999999999999999876555566667778888888889999


Q ss_pred             EecCC
Q 009976          510 VPTGN  514 (521)
Q Consensus       510 ~~~~~  514 (521)
                      .+++|
T Consensus       494 ~~~~~  498 (499)
T PLN03234        494 APTKH  498 (499)
T ss_pred             EeecC
Confidence            98887


No 4  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.2e-74  Score=606.94  Aligned_cols=467  Identities=35%  Similarity=0.660  Sum_probs=353.1

Q ss_pred             CCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCcccccccc
Q 009976           35 SLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYV  114 (521)
Q Consensus        35 ~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~  114 (521)
                      +.||||.++|++|+++++.  ...+..+.+++++||++|++++|+.++|+|+||+++++++.++...|.+++........
T Consensus        36 ~~ppgp~~~Pl~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~  113 (516)
T PLN02183         36 PYPPGPKGLPIIGNMLMMD--QLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYL  113 (516)
T ss_pred             CCCcCCCCCCeeccHHhcC--CcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhcc
Confidence            5788999999999988763  34567799999999999999999999999999999999998876667766643222222


Q ss_pred             ccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhhcCcccchHHHHHHHHHHHhhHHhccc
Q 009976          115 SVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGV  194 (521)
Q Consensus       115 ~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fg~  194 (521)
                      ..+..+.+++.+|+.|+++|+++++++|+.+.++.+.+++ ++++.+++.+.+..+.++|+.+.+..+++|+++.++||.
T Consensus       114 ~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~fG~  192 (516)
T PLN02183        114 TYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAFGS  192 (516)
T ss_pred             ccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhhcC
Confidence            2222455677889999999998667899999998888765 678999999975556789999999999999999999999


Q ss_pred             ccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCCCCCc
Q 009976          195 RFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGA  274 (521)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (521)
                      +.+. .   . .+ +.+....+...+........+|.+.+.. ......+..+..+.+.+++.++++++.+.....+...
T Consensus       193 ~~~~-~---~-~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  265 (516)
T PLN02183        193 SSNE-G---Q-DE-FIKILQEFSKLFGAFNVADFIPWLGWID-PQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADN  265 (516)
T ss_pred             cccc-h---H-HH-HHHHHHHHHHHhCCccHHHhcchhHhcc-cccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            7642 1   1 12 4444444333322222223333222110 0111234445556666777777765543321100000


Q ss_pred             cccCCCchHHHHHHHhhcCCC---------CCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 009976          275 FLLHGNEDFIDVLRRVQKSDD---------LDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEV  345 (521)
Q Consensus       275 ~~~~~~~~~l~~l~~~~~~~~---------~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei  345 (521)
                      ......+|+++.+++...++.         ....++++++..++.++++||+||||++++|++|+|++||++|+|+|+||
T Consensus       266 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei  345 (516)
T PLN02183        266 DSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQEL  345 (516)
T ss_pred             ccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            000123578898887543211         11258999999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCC
Q 009976          346 RSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHD  425 (521)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~  425 (521)
                      +++++.  ...++++++.+|||++|||+||||++|+.+...|.+.+|++++||.|||||.|.++.|++||||++|+||++
T Consensus       346 ~~v~~~--~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~  423 (516)
T PLN02183        346 ADVVGL--NRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDT  423 (516)
T ss_pred             HHHcCC--CCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccc
Confidence            999864  345789999999999999999999999555567999999999999999999999999999999999999999


Q ss_pred             CCCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCc
Q 009976          426 FIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRV  505 (521)
Q Consensus       426 F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (521)
                      |+||||++.+. .+...+++.|+|||+|+|+|+|++||++|+++++|+|+++|++++.++..++.++....++.+..+..
T Consensus       424 F~PeRfl~~~~-~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (516)
T PLN02183        424 FKPSRFLKPGV-PDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRAT  502 (516)
T ss_pred             cCchhhCCCCC-ccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCC
Confidence            99999974322 11223456899999999999999999999999999999999999877654444555566676655566


Q ss_pred             CeEEEecCC
Q 009976          506 PLVLVPTGN  514 (521)
Q Consensus       506 ~l~~~~~~~  514 (521)
                      ++.+.+++|
T Consensus       503 ~~~~~~~~r  511 (516)
T PLN02183        503 RLVAVPTYR  511 (516)
T ss_pred             CcEEEeecC
Confidence            888888887


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3e-74  Score=604.18  Aligned_cols=502  Identities=32%  Similarity=0.593  Sum_probs=375.2

Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCc
Q 009976            1 MANFSPEILFLSFVVSTAILYMINNRRRSLPNSPSLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRV   80 (521)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~   80 (521)
                      |....+.++. +++++++.+++++.+.+......+.||||.++|++||++++.  ..++..+.+++++||++|++++|+.
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~   77 (517)
T PLN02687          1 MDLPLPLLLG-TVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLG--PKPHHTMAALAKTYGPLFRLRFGFV   77 (517)
T ss_pred             CCCcchHHHH-HHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhcC--CchhHHHHHHHHHhCCeeEEecCCc
Confidence            3333444443 333344444444444444344456788999999999998884  3577889999999999999999999


Q ss_pred             cEEEEeCHHHHHHHHHhCCccccCCCccccccccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHH
Q 009976           81 PAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNR  160 (521)
Q Consensus        81 ~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~  160 (521)
                      ++|+++||+++++++.++...|.+++.......+...+.+.+++.+|+.|+++||++.+++|+.++++.+.+.+++++..
T Consensus        78 ~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~  157 (517)
T PLN02687         78 DVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVAL  157 (517)
T ss_pred             eEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHH
Confidence            99999999999999988766677765433222222223455677789999999999755789999999999999999999


Q ss_pred             HHHHHHhh-cCcccchHHHHHHHHHHHhhHHhcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhcc
Q 009976          161 FMSRVKAR-CGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLT  239 (521)
Q Consensus       161 ~~~~l~~~-~~~~~d~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (521)
                      +++.|.+. .+.++|+.+.+..+++|+++.++||.++........... +.+.+..+............+|.+.+.. ..
T Consensus       158 l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~  235 (517)
T PLN02687        158 LVRELARQHGTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKARE-FKEMVVELMQLAGVFNVGDFVPALRWLD-LQ  235 (517)
T ss_pred             HHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHH-HHHHHHHHHHHhccCcHHHHhhhHHHhC-cc
Confidence            99999753 356799999999999999999999998753221111122 4444444433322211112333222111 01


Q ss_pred             CcchhHHhHHHHHHHHHHHHHHhhhhccCCCCCCccccCCCchHHHHHHHhhcCC---CCCCCCCHHHHHHHHHHHHHcc
Q 009976          240 GYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSD---DLDVPLTDDNLMAIVSDMFVAG  316 (521)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~---~~~~~~~~~~l~~~~~~~~~AG  316 (521)
                      +...+..+..+.+.+.+.+.++++++..+.  ..    ....|+++.+++..+++   +.+..++++++.+++.++++||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--~~----~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG  309 (517)
T PLN02687        236 GVVGKMKRLHRRFDAMMNGIIEEHKAAGQT--GS----EEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAG  309 (517)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cC----cccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccc
Confidence            112233444556666777777665543221  00    22468999998765432   1123589999999999999999


Q ss_pred             ccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccCCCCCcchhhcccchhHHHHHHHhhcCCC-CCCCCccccCCCccc
Q 009976          317 VDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTL  395 (521)
Q Consensus       317 ~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p-~~~~~~r~~~~~~~l  395 (521)
                      +|||+++++|++|+|++||++|+|+|+||+++++.  ...++++++++|||++|||+||||++| ++..++|.+.+|+++
T Consensus       310 ~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~  387 (517)
T PLN02687        310 TDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR--DRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEI  387 (517)
T ss_pred             cCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC--CCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeE
Confidence            99999999999999999999999999999999864  346789999999999999999999999 454578999999999


Q ss_pred             cCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCccccccccc--cccCCCcccccccCCCCCCCChhHHHHHHHHHHHH
Q 009976          396 EGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQEEDIK--DFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAG  473 (521)
Q Consensus       396 ~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRwl~~~~~~--~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~  473 (521)
                      +||.|||||.|.++.|++||||++|+||++|+||||++.+...  .....++.|+|||+|+|+|+|++||++|+++++|+
T Consensus       388 ~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~  467 (517)
T PLN02687        388 NGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTAT  467 (517)
T ss_pred             CCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999997532211  11123568999999999999999999999999999


Q ss_pred             HHhhcceecCCCCCCCCCCcccccCcccccCcCeEEEecCCC
Q 009976          474 LLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPLVLVPTGNK  515 (521)
Q Consensus       474 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  515 (521)
                      |+++|++++.++..++++++...+++++.+..++.++.++|-
T Consensus       468 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        468 LVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             HHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence            999999999876544455555567777788889999998884


No 6  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=5.3e-74  Score=604.43  Aligned_cols=470  Identities=26%  Similarity=0.447  Sum_probs=350.8

Q ss_pred             CCCCCCCCCCCeeecccccccCCCchHHHHHHHHHhC-CeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCcccccc
Q 009976           34 PSLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLG-PIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAK  112 (521)
Q Consensus        34 ~~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg-~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~  112 (521)
                      .++||||.++|++||++++......+..+.++.++|| ++|++++|+.++|+|+||+++++++.++...|.++|......
T Consensus        56 ~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~  135 (543)
T PLN02971         56 HPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQK  135 (543)
T ss_pred             CCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchh
Confidence            3588899999999999988532223567889999999 799999999999999999999999998877788877533222


Q ss_pred             ccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhhHH
Q 009976          113 YVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFCLA  190 (521)
Q Consensus       113 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~  190 (521)
                      ....+..++++..+|+.|+++||++.+.++++..++.+.++++++++.+++.+.+.  .+.++|+.+.+..+++|+++.+
T Consensus       136 ~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  215 (543)
T PLN02971        136 ILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKRL  215 (543)
T ss_pred             hccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHH
Confidence            22222233567788999999999987788888777788888888889998887643  3457999999999999999999


Q ss_pred             hcccccccCc---chhhhhHHHHHHHHHHHHHhhc---ccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhh
Q 009976          191 AFGVRFMEDE---DEGQKSKYLASVFIEVEELLTG---FYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTS  264 (521)
Q Consensus       191 ~fg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (521)
                      +||.++....   +.....+ .......+......   ..+.+++|.+.+.. ..+..+...+..+.+.+.+.+.++++.
T Consensus       216 ~fG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~  293 (543)
T PLN02971        216 MFGTRTFSEKTEPDGGPTLE-DIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIIDERI  293 (543)
T ss_pred             HhCCcccccccccccchhHH-HHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999863211   0011011 11222222211111   11222333221110 011122223334455666666766554


Q ss_pred             hccCCCCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHH
Q 009976          265 KRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEE  344 (521)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~E  344 (521)
                      +..+.. ..    ....|+++.+++..++++ ...++++++.+++.++++||+||||++++|++|+|++||++|+|+|+|
T Consensus       294 ~~~~~~-~~----~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E  367 (543)
T PLN02971        294 KMWREG-KR----TQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEE  367 (543)
T ss_pred             HHHhcc-CC----CCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            322110 10    123689999987643221 124899999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCcchhhcccchhHHHHHHHhhcCCC-CCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCC
Q 009976          345 VRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNP  423 (521)
Q Consensus       345 i~~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p-~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP  423 (521)
                      |+++++.  +..++++++++|||++|||+||||++| ++..++|.+.+|++++||.|||||.|.+++|++||||++|+||
T Consensus       368 I~~v~g~--~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP  445 (543)
T PLN02971        368 IDRVVGK--ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDP  445 (543)
T ss_pred             HHHHhCC--CCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCc
Confidence            9999865  356899999999999999999999999 4555789999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCccccc
Q 009976          424 HDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARK  503 (521)
Q Consensus       424 ~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  503 (521)
                      ++|+||||++.++......+++.|+|||+|+|+|+|++||++|+++++|+|+++|+|+++++..  .+++.+.++ +.-.
T Consensus       446 ~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~-~~~~  522 (543)
T PLN02971        446 LSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSET--RVELMESSH-DMFL  522 (543)
T ss_pred             cccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCC--CcchhhhcC-cccc
Confidence            9999999975322111112456899999999999999999999999999999999999876532  356677777 5534


Q ss_pred             CcCeEEEecCCCC
Q 009976          504 RVPLVLVPTGNKG  516 (521)
Q Consensus       504 ~~~l~~~~~~~~~  516 (521)
                      +.++.+.+.+|-+
T Consensus       523 ~~~~~~~~~~~~~  535 (543)
T PLN02971        523 SKPLVMVGELRLS  535 (543)
T ss_pred             cccceeeeeecCC
Confidence            4589999998854


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=2.7e-73  Score=597.64  Aligned_cols=477  Identities=34%  Similarity=0.620  Sum_probs=362.3

Q ss_pred             CCCCCCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCcccc
Q 009976           31 PNSPSLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILS  110 (521)
Q Consensus        31 ~~~~~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~  110 (521)
                      +...+.||||+++|++||+.++.  ..++..+.++++|||++|++++++.+.|+++||+++++++.++...|.+++....
T Consensus        28 ~~~~~~ppgp~~~pl~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~  105 (514)
T PLN03112         28 RKSLRLPPGPPRWPIVGNLLQLG--PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLA  105 (514)
T ss_pred             cCCCCCccCCCCCCeeeeHHhcC--CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCccc
Confidence            33445788999999999998873  4567889999999999999999999999999999999999877767776655332


Q ss_pred             ccccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhh
Q 009976          111 AKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFC  188 (521)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~  188 (521)
                      .....++.+..++..+|+.|+++||++.+++|+.++++.+.+.+.++++.+++.+.+.  .+..+|+.+.+..+++|+++
T Consensus       106 ~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~  185 (514)
T PLN03112        106 AVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVT  185 (514)
T ss_pred             ceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHH
Confidence            2222334445566778999999999977788999999999999999999999987543  35679999999999999999


Q ss_pred             HHhcccccccCcc-h-hhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhc
Q 009976          189 LAAFGVRFMEDED-E-GQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKR  266 (521)
Q Consensus       189 ~~~fg~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (521)
                      .++||.++..... . ....+ +......+............+|.+.+... .+..++..+..+.+.++++..++++++.
T Consensus       186 ~~~fG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~  263 (514)
T PLN03112        186 RMLLGKQYFGAESAGPKEAME-FMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEKKMREVEKRVDEFHDKIIDEHRRA  263 (514)
T ss_pred             HHHcCCccccccccchHHHHH-HHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998743221 0 11112 33333333222211122223333322110 1122333445556666777777665543


Q ss_pred             cCCCCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 009976          267 KQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVR  346 (521)
Q Consensus       267 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~  346 (521)
                      .+.....    ....|+++.+++..++++ ...++++++.+++.++++||+||||++++|++|+|++||++|+|||+||+
T Consensus       264 ~~~~~~~----~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~  338 (514)
T PLN03112        264 RSGKLPG----GKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELD  338 (514)
T ss_pred             hcccccC----CccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence            2210000    223589999887643321 22589999999999999999999999999999999999999999999999


Q ss_pred             HhhccCCCCCcchhhcccchhHHHHHHHhhcCCCC-CCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCC
Q 009976          347 SVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPV-NLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHD  425 (521)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~-~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~  425 (521)
                      ++++.  .+.++++++++|||++|||+||||+||+ +..++|.+.+|++++||.|||||.|.++.|++||||++|+||++
T Consensus       339 ~~~~~--~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~  416 (514)
T PLN03112        339 SVVGR--NRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEE  416 (514)
T ss_pred             HhcCC--CCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhh
Confidence            99865  3458899999999999999999999994 44468999999999999999999999999999999999999999


Q ss_pred             CCCCcccccccc-cc-ccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCccccc
Q 009976          426 FIPERFQQEEDI-KD-FKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARK  503 (521)
Q Consensus       426 F~PeRwl~~~~~-~~-~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  503 (521)
                      ||||||+...+. .. .....++|+|||+|+|+|+|++||++|+++++++|+++|++++.++..++++.....++++.++
T Consensus       417 F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  496 (514)
T PLN03112        417 FRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPK  496 (514)
T ss_pred             cCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCccccc
Confidence            999998542211 11 1123457999999999999999999999999999999999998765434455566667788888


Q ss_pred             CcCeEEEecCCCCCC
Q 009976          504 RVPLVLVPTGNKGYD  518 (521)
Q Consensus       504 ~~~l~~~~~~~~~~~  518 (521)
                      ++++.+.+.+|-++-
T Consensus       497 ~~~~~~~~~~r~~~~  511 (514)
T PLN03112        497 AKPLRAVATPRLAPH  511 (514)
T ss_pred             CCCeEEEeecCCccc
Confidence            889999999997653


No 8  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=5.2e-73  Score=593.11  Aligned_cols=468  Identities=36%  Similarity=0.644  Sum_probs=351.2

Q ss_pred             CCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCcccccccc
Q 009976           35 SLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYV  114 (521)
Q Consensus        35 ~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~  114 (521)
                      +.||+|.++|++||++++. ...++..+.+++++||++|++++++.+.|+|+||+.+++++.++...|.+++........
T Consensus        29 ~~ppgp~~~p~~G~l~~l~-~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~  107 (502)
T PLN02966         29 KLPPGPSPLPVIGNLLQLQ-KLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFI  107 (502)
T ss_pred             CCCcCCCCCCeeccHHhcC-CCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceee
Confidence            4678888999999998885 335778899999999999999999999999999999999998766556555432221222


Q ss_pred             ccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhhHHhc
Q 009976          115 SVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFCLAAF  192 (521)
Q Consensus       115 ~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~~f  192 (521)
                      ..+.....+..+|+.|+++|+++++++|+++.+..+.+.+++.++.+++.|.+.  .+..+|+.+.+..+++|+++.++|
T Consensus       108 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~f  187 (502)
T PLN02966        108 SYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAF  187 (502)
T ss_pred             ccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHHh
Confidence            223333445567999999999877889999999999999999999999999753  345799999999999999999999


Q ss_pred             ccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCCCC
Q 009976          193 GVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGT  272 (521)
Q Consensus       193 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (521)
                      |.+++...+  ...+ +.+.+...........+...+|.+.+...+.+.........+...+++.+.+.+..+.+..  .
T Consensus       188 G~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~  262 (502)
T PLN02966        188 GKKYNEDGE--EMKR-FIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRV--K  262 (502)
T ss_pred             CCccCccch--HHHH-HHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccc--c
Confidence            998864221  1122 3333333222222222222333221111011111122223344555566655543322111  0


Q ss_pred             CccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccC
Q 009976          273 GAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTAS  352 (521)
Q Consensus       273 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~  352 (521)
                           .+..++++.++++.+++..+..++++++..++.++++||+||||++++|++|+|++||++|+|+|+||+++++..
T Consensus       263 -----~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~  337 (502)
T PLN02966        263 -----PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEK  337 (502)
T ss_pred             -----cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc
Confidence                 123578898887654332223589999999999999999999999999999999999999999999999998643


Q ss_pred             CCCCcchhhcccchhHHHHHHHhhcCCC-CCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCC-CCCCCCCCCc
Q 009976          353 GSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLF-TNPHDFIPER  430 (521)
Q Consensus       353 ~~~~~~~~~~~~lpyl~a~i~EtlRl~p-~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~-~dP~~F~PeR  430 (521)
                      ++..++++++++|||++|||+|+||++| ++..++|.+.+|++++||.|||||.|.+++|++||||++| |||++|+|||
T Consensus       338 ~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR  417 (502)
T PLN02966        338 GSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPER  417 (502)
T ss_pred             CCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhh
Confidence            3345789999999999999999999999 5555689999999999999999999999999999999999 9999999999


Q ss_pred             cccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCeEEE
Q 009976          431 FQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPLVLV  510 (521)
Q Consensus       431 wl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  510 (521)
                      |++.+.  +....++.|+|||+|+|+|+|++||++|+++++|+|+++|+|++.++..++.++..+..+++..+..++.+.
T Consensus       418 wl~~~~--~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (502)
T PLN02966        418 FLEKEV--DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLV  495 (502)
T ss_pred             hcCCCC--CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEE
Confidence            974321  112245689999999999999999999999999999999999998776566676667777766444467655


Q ss_pred             ecCCC
Q 009976          511 PTGNK  515 (521)
Q Consensus       511 ~~~~~  515 (521)
                      ..+..
T Consensus       496 ~~~~~  500 (502)
T PLN02966        496 PEKVN  500 (502)
T ss_pred             EEeCC
Confidence            54443


No 9  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.6e-72  Score=586.29  Aligned_cols=464  Identities=31%  Similarity=0.597  Sum_probs=355.3

Q ss_pred             CCCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccccccc
Q 009976           34 PSLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKY  113 (521)
Q Consensus        34 ~~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~  113 (521)
                      .+.||+|.++|++|+++.+.  ...+..+.+++++||++|++++|+.++|+|+||+++++++.++...|.+++.......
T Consensus        30 ~~~pPgp~~~Pl~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~  107 (504)
T PLN00110         30 RKLPPGPRGWPLLGALPLLG--NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATH  107 (504)
T ss_pred             CCCcccCCCCCeeechhhcC--CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhh
Confidence            45788999999999988773  3567889999999999999999999999999999999999887767777764332222


Q ss_pred             cccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhhHHh
Q 009976          114 VSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFCLAA  191 (521)
Q Consensus       114 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~~  191 (521)
                      ...+..+.+++.+|+.|+++|+++.+++|+++.++.+.+.+.+++..+++.+.+.  .+.++|+.+.+..+++|+|+..+
T Consensus       108 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~  187 (504)
T PLN00110        108 LAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVI  187 (504)
T ss_pred             hccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHH
Confidence            2233445667778999999999976678999999999999989999999988653  35678999999999999999999


Q ss_pred             cccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCCC
Q 009976          192 FGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLG  271 (521)
Q Consensus       192 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (521)
                      ||.++....+ ....+ +...+...............+|.+.+.. ..+......+..+.+.+++.+.+.++.+....  
T Consensus       188 fg~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--  262 (504)
T PLN00110        188 LSRRVFETKG-SESNE-FKDMVVELMTTAGYFNIGDFIPSIAWMD-IQGIERGMKHLHKKFDKLLTRMIEEHTASAHE--  262 (504)
T ss_pred             hCCcccccCc-hhHHH-HHHHHHHHHHHhccccHHHHcchHhhhC-cchHHHHHHHHHHHHHHHHHHHHHHHHhhccc--
Confidence            9998621111 11122 4444444333222222222333222111 11122233334455656666666554432211  


Q ss_pred             CCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcc
Q 009976          272 TGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTA  351 (521)
Q Consensus       272 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~  351 (521)
                      .     ....|+++.+++...+. .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|++++++.
T Consensus       263 ~-----~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  336 (504)
T PLN00110        263 R-----KGNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR  336 (504)
T ss_pred             c-----ccCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence            0     12358999888654322 12458999999999999999999999999999999999999999999999999864


Q ss_pred             CCCCCcchhhcccchhHHHHHHHhhcCCCC-CCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCc
Q 009976          352 SGSGRVEENHIHQLKYMKAVIKESMRLHPV-NLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPER  430 (521)
Q Consensus       352 ~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~-~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeR  430 (521)
                        ...++++++++|||++|||+||||++|+ +..++|.+.+|++++||.|||||.|.++.|++||||++|+||++|+|||
T Consensus       337 --~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeR  414 (504)
T PLN00110        337 --NRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPER  414 (504)
T ss_pred             --CCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCccc
Confidence              3457899999999999999999999994 4447899999999999999999999999999999999999999999999


Q ss_pred             cccccccc-cccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCeEE
Q 009976          431 FQQEEDIK-DFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPLVL  509 (521)
Q Consensus       431 wl~~~~~~-~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  509 (521)
                      |++.++.. +...+++.|+|||+|+|+|+|++||++|++++||+|+++|+|++.++.   ++++....+++++|+.++.+
T Consensus       415 fl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  491 (504)
T PLN00110        415 FLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSA  491 (504)
T ss_pred             ccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCCceE
Confidence            97432211 111123579999999999999999999999999999999999987653   23444567788889999999


Q ss_pred             EecCCC
Q 009976          510 VPTGNK  515 (521)
Q Consensus       510 ~~~~~~  515 (521)
                      ++++|-
T Consensus       492 ~~~~r~  497 (504)
T PLN00110        492 MVTPRL  497 (504)
T ss_pred             eeccCC
Confidence            999984


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.8e-71  Score=581.93  Aligned_cols=472  Identities=25%  Similarity=0.449  Sum_probs=347.4

Q ss_pred             CCCCCCCCCCCeeeccccccc-CCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCcccccc
Q 009976           34 PSLPSPPNKLPIIGHLHLFYK-ERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAK  112 (521)
Q Consensus        34 ~~~~~~p~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~  112 (521)
                      .++||+|+++|++||++.+.. ....+..+.+++++||++|++++|+.+.|+|+||+++++++.++...|.+++......
T Consensus        34 ~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~  113 (519)
T PLN00168         34 RRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSR  113 (519)
T ss_pred             CCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchh
Confidence            357888989999999886632 2245678899999999999999999999999999999999988777777776533212


Q ss_pred             ccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhhc--CcccchHHHHHHHHHHHhhHH
Q 009976          113 YVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARC--GLETDMSDLIFAFCTDFFCLA  190 (521)
Q Consensus       113 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~--~~~~d~~~~~~~~~~~vi~~~  190 (521)
                      .+..+.....+..+|+.|+++||.+.+++|+.++++.+.+.+.+.++.+++.|.+..  +..+|+.+.+..++.++++.+
T Consensus       114 ~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~  193 (519)
T PLN00168        114 LLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVLM  193 (519)
T ss_pred             hhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHH
Confidence            111111122233689999999986678999999999999999999999999997543  345789999999999999999


Q ss_pred             hcccccccCcchhhhhHHHHHHHHHHHHHhh-cccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCC
Q 009976          191 AFGVRFMEDEDEGQKSKYLASVFIEVEELLT-GFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQP  269 (521)
Q Consensus       191 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (521)
                      +||.+++..    . ...+............ .......+|.+... +..+...+..+..+.+.+++..+++++++....
T Consensus       194 ~fG~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  267 (519)
T PLN00168        194 CFGERLDEP----A-VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKH-LFRGRLQKALALRRRQKELFVPLIDARREYKNH  267 (519)
T ss_pred             HcCCCcChh----h-HHHHHHHHHHHHHHhcCCCCHHHhCcchhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999987521    1 1112222222211111 11122233322110 000111223344556666777777665443210


Q ss_pred             CC-CCcccc---CCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 009976          270 LG-TGAFLL---HGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEV  345 (521)
Q Consensus       270 ~~-~~~~~~---~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei  345 (521)
                      .. ......   ....|+++.+++....++.+..++++++.+++.++++||+|||+++++|++|+|++||++|+|+|+||
T Consensus       268 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei  347 (519)
T PLN00168        268 LGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEI  347 (519)
T ss_pred             ccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            00 000000   01357899988765322223469999999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCcchhhcccchhHHHHHHHhhcCCCC-CCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCC
Q 009976          346 RSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPV-NLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPH  424 (521)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~-~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~  424 (521)
                      +++++.. ...++++++++|||++|||+||||+||+ +..++|.+.+|++++||.|||||.|.++++++||||++|+||+
T Consensus       348 ~~v~~~~-~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~  426 (519)
T PLN00168        348 KAKTGDD-QEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPM  426 (519)
T ss_pred             HHHhCCC-CCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCcc
Confidence            9998642 3457899999999999999999999994 4556899999999999999999999999999999999999999


Q ss_pred             CCCCCccccccccc--c-ccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCccc
Q 009976          425 DFIPERFQQEEDIK--D-FKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAA  501 (521)
Q Consensus       425 ~F~PeRwl~~~~~~--~-~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  501 (521)
                      +|+||||++.++..  + ...+++.|+|||+|+|+|+|++||++|+++++++|+++|+|+++++.   +++.....++++
T Consensus       427 ~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~  503 (519)
T PLN00168        427 EFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD---EVDFAEKREFTT  503 (519)
T ss_pred             ccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC---cCChhhhceeEE
Confidence            99999997532110  0 11234689999999999999999999999999999999999987642   233333344556


Q ss_pred             ccCcCeEEEecCCC
Q 009976          502 RKRVPLVLVPTGNK  515 (521)
Q Consensus       502 ~~~~~l~~~~~~~~  515 (521)
                      .++.++.+++++|.
T Consensus       504 ~~~~~~~~~~~~R~  517 (519)
T PLN00168        504 VMAKPLRARLVPRR  517 (519)
T ss_pred             eecCCcEEEEEecc
Confidence            66778889888885


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.2e-71  Score=581.96  Aligned_cols=466  Identities=30%  Similarity=0.491  Sum_probs=338.4

Q ss_pred             CCCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccccccc
Q 009976           34 PSLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKY  113 (521)
Q Consensus        34 ~~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~  113 (521)
                      ...||||+++|++|++.++. ....+..+.+++++||++|++++|+.++|+|+||+.+++++.++...|.+++.......
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~-~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~  107 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVG-DDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDI  107 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcC-CCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhH
Confidence            35788999999999998874 23356789999999999999999999999999999999999877666766553322111


Q ss_pred             cccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhhc---CcccchHHHHHHHHHHHhhHH
Q 009976          114 VSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARC---GLETDMSDLIFAFCTDFFCLA  190 (521)
Q Consensus       114 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~---~~~~d~~~~~~~~~~~vi~~~  190 (521)
                      +...+.+++++.+|+.|+++||.+..++|+++.++.+.+.++++++.+++.|....   +..+++.+.+..+++|+++.+
T Consensus       108 ~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~  187 (503)
T PLN02394        108 FTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRM  187 (503)
T ss_pred             hccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHH
Confidence            11112355677789999999998656889999999999999999999999997532   345899999999999999999


Q ss_pred             hcccccccCcchhhhhHHHHHHHHHHHHHhhcc--cccccccccchhhhccCcchhHHhHHHHHHH-HHHHHHHhhhhcc
Q 009976          191 AFGVRFMEDEDEGQKSKYLASVFIEVEELLTGF--YYGDFFSEWVWPGWLTGYTPRVIKGSRNLLN-AVDEIFDKTSKRK  267 (521)
Q Consensus       191 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  267 (521)
                      +||.+++...+ ..... +.............+  ....+++.+.  ..+.++.+........... +.+.+++++++..
T Consensus       188 ~fG~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        188 MFDRRFESEDD-PLFLK-LKALNGERSRLAQSFEYNYGDFIPILR--PFLRGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HhCCCcccccc-hhHHH-HHHHHHHHHHHhcccccchhhhchHHH--HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99998864221 11111 112212111111110  1111122111  0001111111111111111 2222343333221


Q ss_pred             CCCCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 009976          268 QPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRS  347 (521)
Q Consensus       268 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~  347 (521)
                      +..+..   ....+|+++.+++...+    ..++++++..++.++++||+||||++++|++|+|++||++|+|||+||++
T Consensus       264 ~~~~~~---~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~  336 (503)
T PLN02394        264 SAKGMD---KEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDT  336 (503)
T ss_pred             hhccCC---cchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            100000   01246789988876533    24899999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCcchhhcccchhHHHHHHHhhcCCC-CCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCCC
Q 009976          348 VVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDF  426 (521)
Q Consensus       348 ~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p-~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F  426 (521)
                      +++.  +..++++++++||||+|||+||||++| ++...+|.+.+|++++||.|||||.|.+++|++||||++|+||++|
T Consensus       337 v~~~--~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F  414 (503)
T PLN02394        337 VLGP--GNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEF  414 (503)
T ss_pred             HhCC--CCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCcccc
Confidence            9864  345789999999999999999999999 5555689999999999999999999999999999999999999999


Q ss_pred             CCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccC-cccccCc
Q 009976          427 IPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFG-LAARKRV  505 (521)
Q Consensus       427 ~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~  505 (521)
                      +||||++.++.......++.|+|||+|+|+|+|++||++|+++++|+|+++|++++.++.  +.++..+.++ .+.-.+.
T Consensus       415 ~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~  492 (503)
T PLN02394        415 RPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ--SKIDVSEKGGQFSLHIAK  492 (503)
T ss_pred             CccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC--CcCccccccCceeeccCC
Confidence            999997533211112245689999999999999999999999999999999999887653  1244555553 4453444


Q ss_pred             CeEEEecCCC
Q 009976          506 PLVLVPTGNK  515 (521)
Q Consensus       506 ~l~~~~~~~~  515 (521)
                      +.++++.+|-
T Consensus       493 ~~~~~~~~r~  502 (503)
T PLN02394        493 HSTVVFKPRS  502 (503)
T ss_pred             CceEEeecCC
Confidence            8999999884


No 12 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.6e-71  Score=579.97  Aligned_cols=449  Identities=26%  Similarity=0.408  Sum_probs=336.5

Q ss_pred             CCCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccccccc
Q 009976           34 PSLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKY  113 (521)
Q Consensus        34 ~~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~  113 (521)
                      ...+|||.++|++||++++.  ..++..+.+++++||++|++++|+.+.|+++||+++++++.++...|.+++.......
T Consensus        28 ~~~~pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~  105 (482)
T PTZ00404         28 KNELKGPIPIPILGNLHQLG--NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKH  105 (482)
T ss_pred             CCCCCCCCCCCeeccHhhhc--ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeee
Confidence            45677888899999998884  3678889999999999999999999999999999999999876655666554332211


Q ss_pred             cccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhhHHh
Q 009976          114 VSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFCLAA  191 (521)
Q Consensus       114 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~~  191 (521)
                      ... + ..+++.+|+.|+++|+++ ++.|+++.++.+.+.+.+.++.+++.|.+.  .+..+|+.+.+..+++|+++.++
T Consensus       106 ~~~-~-~~l~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  182 (482)
T PTZ00404        106 GTF-Y-HGIVTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYI  182 (482)
T ss_pred             ecc-C-CceeccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHH
Confidence            111 2 334567899999999985 688999999999999999999999999753  35569999999999999999999


Q ss_pred             cccccccCcch--hhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCC
Q 009976          192 FGVRFMEDEDE--GQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQP  269 (521)
Q Consensus       192 fg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (521)
                      ||.+++..++.  ....+ +......+...+........++... +. ...+.....+..+.+.+.+++.+++.++..+.
T Consensus       183 fG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  259 (482)
T PTZ00404        183 FNEDISFDEDIHNGKLAE-LMGPMEQVFKDLGSGSLFDVIEITQ-PL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP  259 (482)
T ss_pred             hccccccccccchhHHHH-HHHHHHHHHHHhCCCchhhhhhHhh-hh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            99987532210  11112 3333333322221111111111110 00 00111122233445555555555443332111


Q ss_pred             CCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 009976          270 LGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVV  349 (521)
Q Consensus       270 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~  349 (521)
                              ...+|+++.+++...+.   ......++.+++.++++||+||||++++|++|+|++||++|+|||+||++++
T Consensus       260 --------~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~  328 (482)
T PTZ00404        260 --------EVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTV  328 (482)
T ss_pred             --------CCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHh
Confidence                    12468999998764211   1123345889999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCcchhhcccchhHHHHHHHhhcCCCC-CCCCccccCCCccc-cCeeeCCCCEEEecchhhccCCCCCCCCCCCC
Q 009976          350 TASGSGRVEENHIHQLKYMKAVIKESMRLHPV-NLLIPRESSDKCTL-EGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFI  427 (521)
Q Consensus       350 ~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~-~~~~~r~~~~~~~l-~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~  427 (521)
                      ++  ...++++++++|||++|||+||||+||+ +..++|.+.+|+++ +||.|||||.|.++.+++||||++|+||++|+
T Consensus       329 ~~--~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~  406 (482)
T PTZ00404        329 NG--RNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFD  406 (482)
T ss_pred             cC--CCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccC
Confidence            65  2457899999999999999999999994 44468999999999 99999999999999999999999999999999


Q ss_pred             CCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCe
Q 009976          428 PERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPL  507 (521)
Q Consensus       428 PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  507 (521)
                      ||||++  +     ..+.+|+|||+|+|+|+|++||++|+++++++|+++|+++++++.   +.......+++++| .++
T Consensus       407 PeRwl~--~-----~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~-~~~  475 (482)
T PTZ00404        407 PSRFLN--P-----DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---KIDETEEYGLTLKP-NKF  475 (482)
T ss_pred             ccccCC--C-----CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---CCCcccccceeecC-CCc
Confidence            999953  2     135689999999999999999999999999999999999987543   22223345666664 578


Q ss_pred             EEEecCC
Q 009976          508 VLVPTGN  514 (521)
Q Consensus       508 ~~~~~~~  514 (521)
                      .+++++|
T Consensus       476 ~v~~~~R  482 (482)
T PTZ00404        476 KVLLEKR  482 (482)
T ss_pred             eeeeecC
Confidence            9988876


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.4e-71  Score=576.58  Aligned_cols=459  Identities=27%  Similarity=0.445  Sum_probs=345.9

Q ss_pred             CCCCCCCCCCCCeeecccccccC-CCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccccc
Q 009976           33 SPSLPSPPNKLPIIGHLHLFYKE-RKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSA  111 (521)
Q Consensus        33 ~~~~~~~p~~~p~~G~~~~~~~~-~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~  111 (521)
                      ....+|||.++|++|++.++.+. .....+..++..+||++|+.|+|+.+.|+++||+.+++|+.++...+...+.....
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            45678999999999999999643 34566788889999999999999999999999999999996544333333222211


Q ss_pred             cccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhhc-CcccchHHHHHHHHHHHhhHH
Q 009976          112 KYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARC-GLETDMSDLIFAFCTDFFCLA  190 (521)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~-~~~~d~~~~~~~~~~~vi~~~  190 (521)
                      .....| .+.+ ..+|+.|+++||+ ++++|+.+.++.+...+.+.+..+...+.... +..+|+.+.+.++|+|++|.+
T Consensus       113 ~~~~lG-~gll-~~~g~~W~~~Rk~-~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  113 LKPWLG-DGLL-FSDGEKWHKHRKL-LTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             HHHHhc-Cccc-cCCchHHHHHHhh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHH
Confidence            112223 3443 4569999999998 57899999999998888888888777776533 333999999999999999999


Q ss_pred             hcccccccCcchhhhhHHHHHHHHHHHHHhhccccccccc-ccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCC
Q 009976          191 AFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFS-EWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQP  269 (521)
Q Consensus       191 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (521)
                      +||..... .+.....+ +.+.+......+..   ....| ...+...+ ++.++..+..+.+.+.+++++.++++....
T Consensus       190 ~~G~~~~~-~~~~~~~~-~~~a~~~~~~~~~~---~~~~p~~~~~~~~~-~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~  263 (497)
T KOG0157|consen  190 AMGPESLD-AEGPELFE-YVQAFDDLTELISK---RINLPLGTKFLYGL-KSERKLKKARKILHDFLEKIIRERREELEK  263 (497)
T ss_pred             hcCCcccc-ccCCcccH-HHHHHHHHHHHHHH---HHcCchhhhHHhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99932211 11111122 44554444443322   11122 11111111 245666777888888899888877754332


Q ss_pred             CCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 009976          270 LGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVV  349 (521)
Q Consensus       270 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~  349 (521)
                      .+...  .....|+++.+... .+    ..+++++|.+++.+|++|||||||++++|++++|+.||++|+|+|+|+++++
T Consensus       264 ~~~~~--~~~~~d~L~~~~~~-~~----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~  336 (497)
T KOG0157|consen  264 EGSGE--EKKRLDFLDTLLLE-ED----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEIL  336 (497)
T ss_pred             cCCcc--cchhhhHHHHHHHh-cc----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence            11110  12245666652221 11    3689999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccc-cCeeeCCCCEEEecchhhccCCCCCC-CCCCCC
Q 009976          350 TASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTL-EGYEIPAKTRIFVNNHAIGRDPKLFT-NPHDFI  427 (521)
Q Consensus       350 ~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l-~g~~IpkGt~v~~~~~~~~~d~~~~~-dP~~F~  427 (521)
                      ++.+.. .+..+.++|+|+++||+|||||||+++.+.|.+.+|+++ +||.||||+.|.++++++|||+++|+ ||++||
T Consensus       337 ~~~~~~-~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~  415 (497)
T KOG0157|consen  337 GNRDDK-WEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFD  415 (497)
T ss_pred             CCCCCC-CChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcC
Confidence            753222 233333369999999999999999777788999999999 58999999999999999999999997 999999


Q ss_pred             CCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCe
Q 009976          428 PERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPL  507 (521)
Q Consensus       428 PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  507 (521)
                      ||||++.+.  ....++++|+|||+|||+|+|++||++|+|+++++|+++|+|++..+..     ..+...++++++.++
T Consensus       416 PeRf~~~~~--~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl  488 (497)
T KOG0157|consen  416 PERFLDGEE--KAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGL  488 (497)
T ss_pred             ccccCCCCC--cCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCe
Confidence            999964322  1134678999999999999999999999999999999999999876531     456678889999999


Q ss_pred             EEEecCCC
Q 009976          508 VLVPTGNK  515 (521)
Q Consensus       508 ~~~~~~~~  515 (521)
                      .+++++|.
T Consensus       489 ~v~~~~r~  496 (497)
T KOG0157|consen  489 KVKLRPRG  496 (497)
T ss_pred             EEEEEeCC
Confidence            99999985


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=9.3e-71  Score=578.74  Aligned_cols=453  Identities=17%  Similarity=0.277  Sum_probs=339.6

Q ss_pred             CCCCCCCCCCeeecccccccC-----------------CCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHh
Q 009976           35 SLPSPPNKLPIIGHLHLFYKE-----------------RKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKT   97 (521)
Q Consensus        35 ~~~~~p~~~p~~G~~~~~~~~-----------------~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~   97 (521)
                      ..||||+++|++||++++...                 ......+.+|+++||++|++++|+.++|+|+||+.+++++.+
T Consensus        42 ~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~  121 (516)
T PLN02290         42 QGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTK  121 (516)
T ss_pred             cCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhc
Confidence            457899999999999887420                 122335788999999999999999999999999999999987


Q ss_pred             CCccccCCCccccccccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh--c-Ccccc
Q 009976           98 HDQVFASRPSILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR--C-GLETD  174 (521)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~-~~~~d  174 (521)
                      +.. +..++...........+.+ ++.++|+.|+++||++ ++.|+.++++.+.+.+.++++.+++.|.+.  . +..+|
T Consensus       122 ~~~-~~~r~~~~~~~~~~~~g~~-l~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd  198 (516)
T PLN02290        122 YNT-VTGKSWLQQQGTKHFIGRG-LLMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVE  198 (516)
T ss_pred             CCC-CCCCcchhhhHHHHHhcCC-ccccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence            633 4444422111111111233 4557899999999985 688999999999999999999999999753  2 24789


Q ss_pred             hHHHHHHHHHHHhhHHhcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHH
Q 009976          175 MSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLN  254 (521)
Q Consensus       175 ~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (521)
                      +.+.+..+++|+++.++||.+++..   ..    +......+............+|.+.+.+  .+...+.....+.+.+
T Consensus       199 ~~~~~~~~~~~vi~~~~fG~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~~~~~~~~~~~~~~~  269 (516)
T PLN02290        199 IGEYMTRLTADIISRTEFDSSYEKG---KQ----IFHLLTVLQRLCAQATRHLCFPGSRFFP--SKYNREIKSLKGEVER  269 (516)
T ss_pred             hHHHHHHHHHHHHHHHHcCCccccc---hH----HHHHHHHHHHHHHHhhhhhcCchhhhCC--ChhHHHHHHHHHHHHH
Confidence            9999999999999999999987431   11    1111122221111111111122111111  1122233344556667


Q ss_pred             HHHHHHHhhhhccCCCCCCccccCCCchHHHHHHHhhcCC-CCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhh
Q 009976          255 AVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSD-DLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLAR  333 (521)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~  333 (521)
                      ++++.++++++........    ...+|+++.+++...+. +.+..++++++.+++.++++||+|||+++++|++|+|++
T Consensus       270 ~~~~~i~~~~~~~~~~~~~----~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~  345 (516)
T PLN02290        270 LLMEIIQSRRDCVEIGRSS----SYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLAS  345 (516)
T ss_pred             HHHHHHHHHHHHhhcccCC----CCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence            7777776655432211000    12468999888754322 112347899999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHhhccCCCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEecchhh
Q 009976          334 HPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAI  413 (521)
Q Consensus       334 ~P~~q~~lr~Ei~~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~  413 (521)
                      ||++|+|+|+||+++++.   ..++++++++|||++|||+||||++|+.+.++|.+.+|++++||.|||||.|.++.|++
T Consensus       346 ~P~vq~kl~~Ei~~v~~~---~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~  422 (516)
T PLN02290        346 NPTWQDKVRAEVAEVCGG---ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAI  422 (516)
T ss_pred             CHHHHHHHHHHHHHHhCC---CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHh
Confidence            999999999999999864   26799999999999999999999999555679999999999999999999999999999


Q ss_pred             ccCCCCC-CCCCCCCCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCC
Q 009976          414 GRDPKLF-TNPHDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVD  492 (521)
Q Consensus       414 ~~d~~~~-~dP~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~  492 (521)
                      ||||++| +||++|+||||++.+.     .....|+|||.|+|+|+|++||++|+++++++|+++|+++++++..+    
T Consensus       423 ~rdp~~~~~dP~~F~PeRfl~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~----  493 (516)
T PLN02290        423 HHSEELWGKDANEFNPDRFAGRPF-----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRH----  493 (516)
T ss_pred             cCChhhhCCChhhcCccccCCCCC-----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCccc----
Confidence            9999999 8999999999963211     12347999999999999999999999999999999999998765321    


Q ss_pred             cccccCcccccCcCeEEEecCCCC
Q 009976          493 LQEVFGLAARKRVPLVLVPTGNKG  516 (521)
Q Consensus       493 ~~~~~~~~~~~~~~l~~~~~~~~~  516 (521)
                       ....+++.+|+.++.+++++|.|
T Consensus       494 -~~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        494 -APVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             -CccceeeecCCCCCeEEEEeCCC
Confidence             12235778999999999999976


No 15 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=6.9e-70  Score=568.17  Aligned_cols=444  Identities=17%  Similarity=0.288  Sum_probs=326.6

Q ss_pred             CCCCCCCCCCCCCCeeecccccccC---CCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCc
Q 009976           31 PNSPSLPSPPNKLPIIGHLHLFYKE---RKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPS  107 (521)
Q Consensus        31 ~~~~~~~~~p~~~p~~G~~~~~~~~---~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~  107 (521)
                      ......||||+++|++||++.+...   +..+..+.+++++||++|++++|+.++|+|+||+++++++.+++..|.++..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            3344678899999999998765421   2455678899999999999999999999999999999999877665643321


Q ss_pred             cccccccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhh-hHHHHHHHHHHHHHHHHhhcCcccchHHHHHHHHHHH
Q 009976          108 ILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNS-FKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDF  186 (521)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~v  186 (521)
                      .....  ..++. .++..+|+.|+++|+++ +++|++..++. +.+.+++.+..+++.|.+  +..+|+.+.+..+++|+
T Consensus       114 ~~~~~--~~g~~-~~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~v  187 (490)
T PLN02500        114 RSIGG--ILGKW-SMLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTFNL  187 (490)
T ss_pred             hHHHH--HhCcc-cccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHHHH
Confidence            11111  12322 33445899999999986 57888888876 566777777777777643  34689999999999999


Q ss_pred             hhHHhcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhc
Q 009976          187 FCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKR  266 (521)
Q Consensus       187 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (521)
                      ++.++||.+.+...   . .+ +...+.........  ....+|.        ....+..+..+.+.+.++++++++++.
T Consensus       188 i~~~~fg~~~~~~~---~-~~-~~~~~~~~~~~~~~--~~~~~p~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~  252 (490)
T PLN02500        188 MAKHIMSMDPGEEE---T-EQ-LKKEYVTFMKGVVS--APLNFPG--------TAYRKALKSRATILKFIERKMEERIEK  252 (490)
T ss_pred             HHHHHhCCCCCchH---H-HH-HHHHHHHHHhhhhc--chhcCCC--------cccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999753211   1 11 22222222111100  0000110        111334445566777777777765543


Q ss_pred             cCCCCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 009976          267 KQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVR  346 (521)
Q Consensus       267 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~  346 (521)
                      .+..+..    ....|+++.+++.       ..++++++.+++.++++||+|||+++++|++|+|++||++|+|+|+||+
T Consensus       253 ~~~~~~~----~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~  321 (490)
T PLN02500        253 LKEEDES----VEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHL  321 (490)
T ss_pred             hhcccCC----CCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence            2211000    1246788888752       1489999999999999999999999999999999999999999999999


Q ss_pred             Hhhcc---CCCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCC
Q 009976          347 SVVTA---SGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNP  423 (521)
Q Consensus       347 ~~~~~---~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP  423 (521)
                      ++.+.   .++..++++|+++|||++|||+||||+||+.+.++|.+.+|++++||.|||||.|.++.|++||||++|+||
T Consensus       322 ~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP  401 (490)
T PLN02500        322 EIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQP  401 (490)
T ss_pred             HHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCc
Confidence            98742   123457999999999999999999999996555789999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccccccc----cCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCc
Q 009976          424 HDFIPERFQQEEDIKDF----KDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGL  499 (521)
Q Consensus       424 ~~F~PeRwl~~~~~~~~----~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  499 (521)
                      ++|+||||++.++..+.    ..+++.|+|||+|+|+|+|++||++|+++++++|+++|+|+++++..+  .   ... .
T Consensus       402 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~--~---~~~-~  475 (490)
T PLN02500        402 QLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA--F---AFP-F  475 (490)
T ss_pred             cccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc--e---ecc-c
Confidence            99999999753221110    024568999999999999999999999999999999999998764321  1   111 2


Q ss_pred             ccccCcCeEEEecC
Q 009976          500 AARKRVPLVLVPTG  513 (521)
Q Consensus       500 ~~~~~~~l~~~~~~  513 (521)
                       +.+..++.+++++
T Consensus       476 -~~~~~~l~~~~~~  488 (490)
T PLN02500        476 -VDFPKGLPIRVRR  488 (490)
T ss_pred             -ccCCCCceEEEEe
Confidence             2334588887764


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2e-68  Score=558.34  Aligned_cols=471  Identities=25%  Similarity=0.449  Sum_probs=337.1

Q ss_pred             CCCCCCCCCCCCeeecccccccCCCchHHHHHHHHHh-CCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccccc
Q 009976           33 SPSLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKL-GPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSA  111 (521)
Q Consensus        33 ~~~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~ky-g~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~  111 (521)
                      ...+||||.++|++||++++.........+.+..++| |++|++++|+.++|+|+||+++++++.++...|.+++.....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            3457889999999999998742111123455666666 799999999999999999999999999877778877653322


Q ss_pred             cccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhhH
Q 009976          112 KYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFCL  189 (521)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~~  189 (521)
                      ..+..+..++.+..+|+.|+++|+++.+.+++.+....+.++++++++.+++.+.+.  .+.++|+.+.+..+++|+++.
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  197 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR  197 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence            222111224555556999999999976656666666666777777888999998753  345699999999999999999


Q ss_pred             HhcccccccCcc----hhhhhHHHHHHHHHHHHHhhc---ccccccccccchhhh-ccCcchhHHhHHHHHHHHHHHHHH
Q 009976          190 AAFGVRFMEDED----EGQKSKYLASVFIEVEELLTG---FYYGDFFSEWVWPGW-LTGYTPRVIKGSRNLLNAVDEIFD  261 (521)
Q Consensus       190 ~~fg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  261 (521)
                      ++||.+++....    .......+......+......   ....+.++.|.. .+ +.+...+.......+.++++++++
T Consensus       198 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~i~  276 (534)
T PLN03018        198 MLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLR-GWNIDGQEERAKVNVNLVRSYNNPIID  276 (534)
T ss_pred             HHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhh-hhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            999998742110    000001011112222221111   111111221100 01 011112223334456667777776


Q ss_pred             hhhhccCCCCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHH
Q 009976          262 KTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKA  341 (521)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~l  341 (521)
                      ++.+.....+..    ....|+++.++...++++ ...++++++..++.++++||+|||+++++|++|+|++||++|+|+
T Consensus       277 ~~~~~~~~~~~~----~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl  351 (534)
T PLN03018        277 ERVELWREKGGK----AAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKA  351 (534)
T ss_pred             HHHHHhhhccCC----CCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence            654422110000    123589999887653321 113899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCcchhhcccchhHHHHHHHhhcCCC-CCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCC
Q 009976          342 QEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLF  420 (521)
Q Consensus       342 r~Ei~~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p-~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~  420 (521)
                      ++||+++++.  +..++.+++.+|||++|||+||||++| ++...+|.+.+|++++||.|||||.|.++.|++||||++|
T Consensus       352 ~~Ei~~v~~~--~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~  429 (534)
T PLN03018        352 LKELDEVVGK--DRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIW  429 (534)
T ss_pred             HHHHHHHhCC--CCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccC
Confidence            9999999864  346789999999999999999999999 4544579999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccccccc-c--ccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCccccc
Q 009976          421 TNPHDFIPERFQQEEDIK-D--FKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVF  497 (521)
Q Consensus       421 ~dP~~F~PeRwl~~~~~~-~--~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  497 (521)
                      +||++|+||||++.++.. .  ....+..|+|||+|+|+|+|++||++|+++++++|+++|++++.++..  ++++....
T Consensus       430 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~  507 (534)
T PLN03018        430 KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFG--PLSLEEDD  507 (534)
T ss_pred             CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCC--CCCccccc
Confidence            999999999997432210 0  012356899999999999999999999999999999999999875431  23343444


Q ss_pred             CcccccCcCeEEEecCC
Q 009976          498 GLAARKRVPLVLVPTGN  514 (521)
Q Consensus       498 ~~~~~~~~~l~~~~~~~  514 (521)
                      +++..+ .++.+++++|
T Consensus       508 ~~~~~p-~~~~v~~~~R  523 (534)
T PLN03018        508 ASLLMA-KPLLLSVEPR  523 (534)
T ss_pred             cceecC-CCeEEEEEec
Confidence            544544 5899999998


No 17 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6.3e-69  Score=557.08  Aligned_cols=453  Identities=25%  Similarity=0.388  Sum_probs=339.6

Q ss_pred             CCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCcccccccccc
Q 009976           37 PSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSV  116 (521)
Q Consensus        37 ~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~  116 (521)
                      ||||+++|++||++++. ...++..+.+++++||++|++++|+.++|+|+||+++++++.++...|.+++...... ...
T Consensus         1 ppgp~~lP~iG~l~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~-~~~   78 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLK-EKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALT-VLT   78 (466)
T ss_pred             CcCCCCCCccccHHHcC-CCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHH-HHh
Confidence            57888999999999885 3457889999999999999999999999999999999999998777777665332211 122


Q ss_pred             CCCceeeC-CCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh----cCcccchHHHHHHHHHHHhhHHh
Q 009976          117 GPADVTFS-PNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR----CGLETDMSDLIFAFCTDFFCLAA  191 (521)
Q Consensus       117 ~~~~~~~~-~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~----~~~~~d~~~~~~~~~~~vi~~~~  191 (521)
                      +.+..++. .+|+.|+++||.+.+++++...++.+.+.+++.++.+++.+...    .+..+|+.+.+..+++|+++.++
T Consensus        79 ~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~  158 (466)
T PLN02655         79 RDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQA  158 (466)
T ss_pred             cCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHH
Confidence            22333333 45899999998878889998888888888888888888877532    35679999999999999999999


Q ss_pred             cccccccCcchh---hh--hHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhc
Q 009976          192 FGVRFMEDEDEG---QK--SKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKR  266 (521)
Q Consensus       192 fg~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (521)
                      ||.+++......   ..  .+.+......+........+...+|.+.+..+ ..+.....+....+.+.++++++++++.
T Consensus       159 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (466)
T PLN02655        159 LGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKR  237 (466)
T ss_pred             hccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999865321110   00  01122222222222221222233443222110 0111111111222334555555544433


Q ss_pred             cCCCCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 009976          267 KQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVR  346 (521)
Q Consensus       267 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~  346 (521)
                      ...  .     ....|+++.++...      ..++++++.+++.++++||+|||+++|+|++|+|++||++|+|+|+||+
T Consensus       238 ~~~--~-----~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~  304 (466)
T PLN02655        238 IAR--G-----EERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIR  304 (466)
T ss_pred             hcC--C-----CCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            221  1     12357899888653      1489999999999999999999999999999999999999999999999


Q ss_pred             HhhccCCCCCcchhhcccchhHHHHHHHhhcCCC-CCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCC
Q 009976          347 SVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHD  425 (521)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p-~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~  425 (521)
                      ++++.  . .++++++++|||++|||+||||++| ++...+|.+.+|++++||.|||||.|.++.+++||||++|+||++
T Consensus       305 ~~~~~--~-~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~  381 (466)
T PLN02655        305 EVCGD--E-RVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEE  381 (466)
T ss_pred             HHhCC--C-CCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhc
Confidence            99864  2 3899999999999999999999999 455568999999999999999999999999999999999999999


Q ss_pred             CCCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCc
Q 009976          426 FIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRV  505 (521)
Q Consensus       426 F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (521)
                      |+||||++.+..   ....+.++|||+|+|+|+|++||.+|+++++++||++|++++.++..+    .....++++.++.
T Consensus       382 F~PeR~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~----~~~~~~~~~~~~~  454 (466)
T PLN02655        382 WDPERFLGEKYE---SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEE----KEDTVQLTTQKLH  454 (466)
T ss_pred             cCccccCCCCcc---cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCcc----ccchhheeEeecC
Confidence            999999643211   112468999999999999999999999999999999999998765321    2334577788888


Q ss_pred             CeEEEecCCC
Q 009976          506 PLVLVPTGNK  515 (521)
Q Consensus       506 ~l~~~~~~~~  515 (521)
                      ++.+++.+|.
T Consensus       455 ~~~~~~~~r~  464 (466)
T PLN02655        455 PLHAHLKPRG  464 (466)
T ss_pred             CcEEEEeecC
Confidence            9999998875


No 18 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.7e-68  Score=522.51  Aligned_cols=455  Identities=24%  Similarity=0.403  Sum_probs=355.9

Q ss_pred             CCCCCCCCCeeeccccccc--CCCchHHHHHHHHHhCCeEEEe-cCCccEEEEeCHHHHHHHHHhCCccccCCC-ccccc
Q 009976           36 LPSPPNKLPIIGHLHLFYK--ERKPHKSFAKLAEKLGPIFYIQ-LGRVPAVVVSSKELAKQVLKTHDQVFASRP-SILSA  111 (521)
Q Consensus        36 ~~~~p~~~p~~G~~~~~~~--~~~~~~~~~~~~~kyg~i~~~~-~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~-~~~~~  111 (521)
                      ..|+|+.+|++|.+..+.+  ..+.|+.....+++||+||+.. +|+...|++.+|+.++.++++.+. +.-|| ....+
T Consensus        51 ~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~w  129 (519)
T KOG0159|consen   51 EIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEPW  129 (519)
T ss_pred             hcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccchh
Confidence            4588999999999885432  2356777888899999999999 889999999999999999987654 34454 22222


Q ss_pred             cc--cccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhhc-----CcccchHHHHHHHHH
Q 009976          112 KY--VSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARC-----GLETDMSDLIFAFCT  184 (521)
Q Consensus       112 ~~--~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~-----~~~~d~~~~~~~~~~  184 (521)
                      ..  -.+++..+++..+|+.|.+.|..+.+.+++++.++.+.+.+++.+++|++.+....     ..+.|+.+.+.+|++
T Consensus       130 ~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wsl  209 (519)
T KOG0159|consen  130 VAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSL  209 (519)
T ss_pred             hhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence            11  12344455677899999999999999999999999999999999999999997543     346899999999999


Q ss_pred             HHhhHHhcccccccCcchh-hhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhh
Q 009976          185 DFFCLAAFGVRFMEDEDEG-QKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKT  263 (521)
Q Consensus       185 ~vi~~~~fg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (521)
                      +.||.++||++++...... ...+.+..+...++.....+...  .++|+++  .++.+++..+.+..+.+..+.++++.
T Consensus       210 Esi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~--p~l~r~~--~t~~wk~~~~~~D~i~~~~~~~Id~~  285 (519)
T KOG0159|consen  210 ESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLM--PSLWRYF--PTKVWKDFVRAWDQIFDVGDKYIDNA  285 (519)
T ss_pred             HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhc--chHHHhC--CChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998544321 11122444444444433322221  1333332  23455677777777777777777766


Q ss_pred             hhccCCCCCCccccCCCc-hHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHH
Q 009976          264 SKRKQPLGTGAFLLHGNE-DFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQ  342 (521)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~-~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr  342 (521)
                      .+..+......   .+.. .+++.|.+        +.++.+++..+++++++||.||||.|++|+||+||+||++|++|+
T Consensus       286 l~~l~~~~~~~---~~~~~~l~~~L~~--------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~  354 (519)
T KOG0159|consen  286 LEELEKQDSAG---SEYTGSLLELLLR--------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLR  354 (519)
T ss_pred             HHHHHhccccc---cchhHHHHHHHHH--------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHH
Confidence            55433211100   1112 22333322        247889999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCC
Q 009976          343 EEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTN  422 (521)
Q Consensus       343 ~Ei~~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~d  422 (521)
                      +|+.++..+. +..++.+++++||||.||||||+||||+++.+.|+..+|.+++||.|||||.|.+.++.+.+||++|++
T Consensus       355 ~Ei~~~~p~~-~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~  433 (519)
T KOG0159|consen  355 EEILAVLPSG-NSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPD  433 (519)
T ss_pred             HHHHhhCCCc-ccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCC
Confidence            9999998653 556889999999999999999999999888888999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccc
Q 009976          423 PHDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAAR  502 (521)
Q Consensus       423 P~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  502 (521)
                      |++|+|||||+...   ...++++++|||.|+|+|+|+++|.+|+-++||+++++|+++...+   ++  ++..+.+++.
T Consensus       434 p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~---~p--v~~~~~~il~  505 (519)
T KOG0159|consen  434 PEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE---EP--VEYVYRFILV  505 (519)
T ss_pred             ccccChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC---CC--ccceeEEEEc
Confidence            99999999975431   2357899999999999999999999999999999999999988653   22  4556666778


Q ss_pred             cCcCeEEEecCCC
Q 009976          503 KRVPLVLVPTGNK  515 (521)
Q Consensus       503 ~~~~l~~~~~~~~  515 (521)
                      |..++.++.++|.
T Consensus       506 P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  506 PNRPLRFKFRPRN  518 (519)
T ss_pred             CCCCcceeeeeCC
Confidence            8889999998874


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.4e-67  Score=549.63  Aligned_cols=453  Identities=17%  Similarity=0.271  Sum_probs=323.9

Q ss_pred             CCCCCCCCeeecccccccC-CCchHHHHHHHHHhCCeEE---EecCCccEEEEeCHHHHHHHHHhCCccccCCCcccccc
Q 009976           37 PSPPNKLPIIGHLHLFYKE-RKPHKSFAKLAEKLGPIFY---IQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAK  112 (521)
Q Consensus        37 ~~~p~~~p~~G~~~~~~~~-~~~~~~~~~~~~kyg~i~~---~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~  112 (521)
                      .|+|.++|++||+..+... ...++.+.+...+||..+.   .++|+.++|+|+||+++++|+.+....|.+++....  
T Consensus        33 ~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~--  110 (500)
T PLN02169         33 QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK--  110 (500)
T ss_pred             CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH--
Confidence            4567789999999877522 1223334444455786555   678899999999999999999876555554432111  


Q ss_pred             ccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhh--hHHHHHHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhh
Q 009976          113 YVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNS--FKVVLDEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFC  188 (521)
Q Consensus       113 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~  188 (521)
                      .....+ ..+++++|+.|+++||++ +++|+.+.+..  ..+.+++.++.+++.+.+.  .+..+|+.+.+..+++|+++
T Consensus       111 ~~~~~g-~gl~~~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~  188 (500)
T PLN02169        111 IFDVLG-EGILTVDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSS  188 (500)
T ss_pred             HHHhhc-CcccccCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHH
Confidence            111112 345567899999999995 68898887653  2466667778888887643  35679999999999999999


Q ss_pred             HHhcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccc--hhhhc-cCcchhHHhHHHHHHHHHHHHHHhhhh
Q 009976          189 LAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWV--WPGWL-TGYTPRVIKGSRNLLNAVDEIFDKTSK  265 (521)
Q Consensus       189 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (521)
                      .++||.+.+.........+ +.............   ....|.+.  ++.++ .++.++..+..+.+.+.+++++++++.
T Consensus       189 ~~~fG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~  264 (500)
T PLN02169        189 ILMTGYDPMSLSIEMLEVE-FGEAADIGEEAIYY---RHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRK  264 (500)
T ss_pred             hheeCCCccccCCCCCCCH-HHHHHHHHHHHHHh---HHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999997643221111012 33333333222111   11112111  11222 233445566677788888888876654


Q ss_pred             ccCCCCCCccccCCCchHHHHHHHhhcCC-CCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHH
Q 009976          266 RKQPLGTGAFLLHGNEDFIDVLRRVQKSD-DLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEE  344 (521)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~E  344 (521)
                      .....+..   ....+|+++.+++...++ ..+..++++++.+++.++++||+||||++++|++|+|++||++|+|||+|
T Consensus       265 ~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~E  341 (500)
T PLN02169        265 EEISRAET---EPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHE  341 (500)
T ss_pred             Hhhccccc---cCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            31110000   012367888888654321 11124788999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCC-ccccCeeeCCCCEEEecchhhccCCCCC-CC
Q 009976          345 VRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDK-CTLEGYEIPAKTRIFVNNHAIGRDPKLF-TN  422 (521)
Q Consensus       345 i~~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~-~~l~g~~IpkGt~v~~~~~~~~~d~~~~-~d  422 (521)
                      |++++        +++++.+||||+|||+||||+||+.+.+.|.+.+| +.++|+.|||||.|.+++|++||||++| +|
T Consensus       342 i~~v~--------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~d  413 (500)
T PLN02169        342 INTKF--------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGED  413 (500)
T ss_pred             HHhhC--------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCC
Confidence            99763        56899999999999999999999555556666655 4459999999999999999999999999 89


Q ss_pred             CCCCCCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccc
Q 009976          423 PHDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAAR  502 (521)
Q Consensus       423 P~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  502 (521)
                      |++|+||||++.++... ...++.|+|||+|+|+|+|++||++|+++++++|+++|+|+++++.   +  +....+++++
T Consensus       414 P~~F~PeRfl~~~~~~~-~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~--~~~~~~~~l~  487 (500)
T PLN02169        414 ALDFKPERWISDNGGLR-HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---K--IEAIPSILLR  487 (500)
T ss_pred             hhhcCccccCCCCCCcc-CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---C--cccccceEEe
Confidence            99999999974322111 1136789999999999999999999999999999999999987542   2  2334567788


Q ss_pred             cCcCeEEEecCC
Q 009976          503 KRVPLVLVPTGN  514 (521)
Q Consensus       503 ~~~~l~~~~~~~  514 (521)
                      +++++.+++++|
T Consensus       488 ~~~gl~l~l~~~  499 (500)
T PLN02169        488 MKHGLKVTVTKK  499 (500)
T ss_pred             cCCCEEEEEEeC
Confidence            999999999887


No 20 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.3e-67  Score=546.33  Aligned_cols=431  Identities=21%  Similarity=0.377  Sum_probs=331.5

Q ss_pred             CCCCCCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCcccc
Q 009976           31 PNSPSLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILS  110 (521)
Q Consensus        31 ~~~~~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~  110 (521)
                      ..+.+.||||.++|++||++++. ...++..+.+++++||++|++++++.++|+|+||+++++++.++...|.  +....
T Consensus        31 ~~~~~~Ppgp~~~P~iG~~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~  107 (463)
T PLN02196         31 STKLPLPPGTMGWPYVGETFQLY-SQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPA  107 (463)
T ss_pred             CCCCCCCCCCCCCCccchHHHHH-hcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCch
Confidence            33456788888899999988765 4567888999999999999999999999999999999999987665552  22221


Q ss_pred             ccccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhhcCcccchHHHHHHHHHHHhhHH
Q 009976          111 AKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLA  190 (521)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~vi~~~  190 (521)
                      ......|. ..++..+|+.|+++||++ ++.|+++++..+.+.+++.++++++.|.   +..+++.+.+..+++|+++.+
T Consensus       108 ~~~~~~g~-~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~  182 (463)
T PLN02196        108 SKERMLGK-QAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLS  182 (463)
T ss_pred             HHHHHcCc-ccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHH
Confidence            11112232 334557899999999995 5789999999999999999999988874   346899999999999999999


Q ss_pred             hcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCC
Q 009976          191 AFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPL  270 (521)
Q Consensus       191 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (521)
                      +||.+.....     .. +.+.+..+....      ..++.. .+.   ....+..+....+.+.+.+.+.++.+..   
T Consensus       183 ~fG~~~~~~~-----~~-~~~~~~~~~~~~------~~~~~~-~p~---~~~~~~~~a~~~~~~~~~~~i~~~~~~~---  243 (463)
T PLN02196        183 IFGKDEVLYR-----ED-LKRCYYILEKGY------NSMPIN-LPG---TLFHKSMKARKELAQILAKILSKRRQNG---  243 (463)
T ss_pred             HcCCCCchHH-----HH-HHHHHHHHhcch------hccccc-CCC---ccchHHHHHHHHHHHHHHHHHHHHhhcC---
Confidence            9998742110     11 222222111111      011111 111   1123444556666677777765543221   


Q ss_pred             CCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 009976          271 GTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVT  350 (521)
Q Consensus       271 ~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~  350 (521)
                             ....|+++.+++.   .   ..++++++.++++++++||+|||+++++|++|+|++||++|+|+|+|++++.+
T Consensus       244 -------~~~~d~l~~ll~~---~---~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~  310 (463)
T PLN02196        244 -------SSHNDLLGSFMGD---K---EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRK  310 (463)
T ss_pred             -------CCcccHHHHHHhc---C---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence                   1235788877642   1   24899999999999999999999999999999999999999999999999886


Q ss_pred             cCC-CCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCC
Q 009976          351 ASG-SGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPE  429 (521)
Q Consensus       351 ~~~-~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~Pe  429 (521)
                      ..+ ...++++++++|||++|||+||||++|+.+...|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||
T Consensus       311 ~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~Pe  390 (463)
T PLN02196        311 DKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPS  390 (463)
T ss_pred             ccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChh
Confidence            322 3457899999999999999999999996555679999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCeEE
Q 009976          430 RFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPLVL  509 (521)
Q Consensus       430 Rwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  509 (521)
                      ||++  +     ..+..++|||+|+|.|+|++||++|+++++++|+++|+|+++++.  .+  +  .+..+..|+.++.+
T Consensus       391 Rfl~--~-----~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~--~~--~--~~~~~~~p~~~~~~  457 (463)
T PLN02196        391 RFEV--A-----PKPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS--NG--I--QYGPFALPQNGLPI  457 (463)
T ss_pred             hhcC--C-----CCCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC--Cc--e--EEcccccCCCCceE
Confidence            9963  1     134689999999999999999999999999999999999987532  11  2  34445668889888


Q ss_pred             EecCC
Q 009976          510 VPTGN  514 (521)
Q Consensus       510 ~~~~~  514 (521)
                      ++++.
T Consensus       458 ~~~~~  462 (463)
T PLN02196        458 ALSRK  462 (463)
T ss_pred             EEecC
Confidence            87754


No 21 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.9e-67  Score=545.65  Aligned_cols=429  Identities=19%  Similarity=0.277  Sum_probs=324.3

Q ss_pred             CCCCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCcccccccc
Q 009976           35 SLPSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYV  114 (521)
Q Consensus        35 ~~~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~  114 (521)
                      +.||||+++|++||+..+.+  +....+.+++++||++|++++|+.++|+|+||+.+++++.++...|..+.... .. .
T Consensus        31 ~~ppgp~~~P~~G~~~~~~~--~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~-~~-~  106 (463)
T PLN02774         31 GLPPGTMGWPLFGETTEFLK--QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQS-ML-D  106 (463)
T ss_pred             CCCCCCCCCCchhhHHHHHH--hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHH-HH-H
Confidence            46778888999999988752  45667899999999999999999999999999999999987655553322111 11 1


Q ss_pred             ccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhh-hHHHHHHHHHHHHHHHHhhcCcccchHHHHHHHHHHHhhHHhcc
Q 009976          115 SVGPADVTFSPNGPYWRQARKICVTELLSPKRVNS-FKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFG  193 (521)
Q Consensus       115 ~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fg  193 (521)
                      ..|. ..+++.+|+.|+++|+++ .++|+++.++. +.+.+++.+++++++|..  +.++|+.+.+..+++++++.++||
T Consensus       107 ~lg~-~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~g  182 (463)
T PLN02774        107 ILGT-CNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG--LKTIDIQEKTKEMALLSALKQIAG  182 (463)
T ss_pred             HhCc-cchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCCEEeeHHHHHHHHHHHHHHHcC
Confidence            2232 234456899999999986 67899998876 688888888888887753  256899999999999999999999


Q ss_pred             cccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCCCCC
Q 009976          194 VRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTG  273 (521)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (521)
                      .+...    .. .+ +.+.+   ........   .++.+ ++.   ....+..+..+.+.+.+++.++++++.  .    
T Consensus       183 ~~~~~----~~-~~-~~~~~---~~~~~~~~---~~~~~-lp~---~~~~~~~~~~~~~~~~~~~~i~~r~~~--~----  240 (463)
T PLN02774        183 TLSKP----IS-EE-FKTEF---FKLVLGTL---SLPID-LPG---TNYRSGVQARKNIVRMLRQLIQERRAS--G----  240 (463)
T ss_pred             CCChH----HH-HH-HHHHH---HHHhcccc---cCCcC-CCC---hhhhHHHHHHHHHHHHHHHHHHHHHhc--C----
Confidence            86421    11 11 22211   11111110   11111 110   111233445566677777777654422  1    


Q ss_pred             ccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccC-
Q 009976          274 AFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTAS-  352 (521)
Q Consensus       274 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~-  352 (521)
                          ...+|+++.+++... +  +..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+||+++.+.. 
T Consensus       241 ----~~~~d~l~~ll~~~~-~--~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~  313 (463)
T PLN02774        241 ----ETHTDMLGYLMRKEG-N--RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKR  313 (463)
T ss_pred             ----CCcccHHHHHHhCcc-C--CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccC
Confidence                124689998876321 1  23589999999999999999999999999999999999999999999999997532 


Q ss_pred             CCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCccc
Q 009976          353 GSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQ  432 (521)
Q Consensus       353 ~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRwl  432 (521)
                      ++..++++++++|||++|||+|+||++|+++.++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+
T Consensus       314 ~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl  393 (463)
T PLN02774        314 PEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWL  393 (463)
T ss_pred             CCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcC
Confidence            13457899999999999999999999996556689999999999999999999999999999999999999999999996


Q ss_pred             cccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCeEEEec
Q 009976          433 QEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPLVLVPT  512 (521)
Q Consensus       433 ~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  512 (521)
                      +.+.    + ....|+|||+|+|+|+|++||.+|++++++.|+++|+|++.++..+     ...  .++.|++++.++++
T Consensus       394 ~~~~----~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~-----~~~--~~~~p~~g~~~~~~  461 (463)
T PLN02774        394 DKSL----E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL-----MKF--PRVEAPNGLHIRVS  461 (463)
T ss_pred             CCCc----C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc-----ccC--CCCCCCCCceEEee
Confidence            4221    1 1236999999999999999999999999999999999999765321     111  12346788888877


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.7e-67  Score=553.67  Aligned_cols=458  Identities=19%  Similarity=0.255  Sum_probs=326.6

Q ss_pred             CCCCCCCCeeecccccccCCCchHHHHHHHHHh---CCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccccccc
Q 009976           37 PSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKL---GPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKY  113 (521)
Q Consensus        37 ~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~ky---g~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~  113 (521)
                      +|||.++|++||++++..   .+..+.+|.++|   |++|++++|+.+.|+|+||+.+++|+.++...|.+.+.......
T Consensus        32 ~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~  108 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK---NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME  108 (516)
T ss_pred             cCCCCCCCeecchHHHHh---ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH
Confidence            468888999999877652   134466777777   89999999999999999999999999865444543321110000


Q ss_pred             cccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHH-HHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhhHH
Q 009976          114 VSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVL-DEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFCLA  190 (521)
Q Consensus       114 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~  190 (521)
                       ...+. .+++.+|+.|+++||++ ++.|+.+.++.+.+.+ ++.++.+++.+.+.  .+..+|+.+++..+++|+++.+
T Consensus       109 -~~~g~-~l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  185 (516)
T PLN03195        109 -VLLGD-GIFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV  185 (516)
T ss_pred             -HHhcC-eeeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence             11122 35667899999999985 6789999999988865 66677777777532  3567999999999999999999


Q ss_pred             hcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhc-cCcchhHHhHHHHHHHHHHHHHHhhhhccCC
Q 009976          191 AFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWL-TGYTPRVIKGSRNLLNAVDEIFDKTSKRKQP  269 (521)
Q Consensus       191 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (521)
                      +||.+++...+...... +...+.........   ....|.+.+..++ ....++..+..+.+.+++.+.++++.+....
T Consensus       186 ~fG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (516)
T PLN03195        186 GFGVEIGTLSPSLPENP-FAQAFDTANIIVTL---RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDE  261 (516)
T ss_pred             HhCCCccccccCCCccH-HHHHHHHHHHHHHH---HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99998864321111011 33333222211100   0001111111111 1111223344556666677777655433211


Q ss_pred             CCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 009976          270 LGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVV  349 (521)
Q Consensus       270 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~  349 (521)
                      . .... ....+|+++.+++..+++  +..++++++.+++.++++||+|||+++++|++|+|++||++|+|||+||++++
T Consensus       262 ~-~~~~-~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~  337 (516)
T PLN03195        262 A-RKSG-KKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALE  337 (516)
T ss_pred             c-cccc-ccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence            0 0000 012468888888754321  23589999999999999999999999999999999999999999999999987


Q ss_pred             ccC------------------CCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCcc-ccCeeeCCCCEEEecc
Q 009976          350 TAS------------------GSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCT-LEGYEIPAKTRIFVNN  410 (521)
Q Consensus       350 ~~~------------------~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~-l~g~~IpkGt~v~~~~  410 (521)
                      +..                  .+..++++++++||||+|||+||||+||+.+..+|.+.+|.+ ++|+.|||||.|.++.
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~  417 (516)
T PLN03195        338 KERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVP  417 (516)
T ss_pred             hcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEeh
Confidence            431                  023478999999999999999999999955555666666655 4999999999999999


Q ss_pred             hhhccCCCCC-CCCCCCCCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCC
Q 009976          411 HAIGRDPKLF-TNPHDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPS  489 (521)
Q Consensus       411 ~~~~~d~~~~-~dP~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~  489 (521)
                      |++||||++| +||++|+||||++.++.  ....++.|+|||+|+|+|+|++||++|++++++.|+++|++++.++.   
T Consensus       418 ~~~h~dp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---  492 (516)
T PLN03195        418 YSMGRMEYNWGPDAASFKPERWIKDGVF--QNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH---  492 (516)
T ss_pred             HhhccChhhhccChhhcCCcccCCCCCc--CCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC---
Confidence            9999999999 99999999999742211  11245679999999999999999999999999999999999986542   


Q ss_pred             CCCcccccCcccccCcCeEEEecCCC
Q 009976          490 DVDLQEVFGLAARKRVPLVLVPTGNK  515 (521)
Q Consensus       490 ~~~~~~~~~~~~~~~~~l~~~~~~~~  515 (521)
                      ++  .....++..++.++.+++++|.
T Consensus       493 ~~--~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        493 PV--KYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             cc--eeeeeeEEecCCCEEEEEEeCC
Confidence            22  2233456678889999998873


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.8e-67  Score=555.84  Aligned_cols=450  Identities=22%  Similarity=0.335  Sum_probs=327.2

Q ss_pred             eecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccccccccccCCCceeeCC
Q 009976           46 IGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPADVTFSP  125 (521)
Q Consensus        46 ~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (521)
                      +||+..+. ++.++..+.++++||||||++++|+.++|+|+||+.+++|+.+....|.+++... ..... .+. .+++.
T Consensus       142 ~G~l~~i~-~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~-~~~~~-~g~-~l~~~  217 (633)
T PLN02738        142 KGSISAVR-GEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAE-ILEFV-MGK-GLIPA  217 (633)
T ss_pred             cCcHHHhc-CchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHH-HHhhc-cCC-ceecC
Confidence            55555553 5667888999999999999999999999999999999999987655555442211 11011 222 34567


Q ss_pred             CChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhhHHhcccccccCcchh
Q 009976          126 NGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEG  203 (521)
Q Consensus       126 ~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~~fg~~~~~~~~~~  203 (521)
                      +|+.|+++|+.+ +++|+.+.+..+++.+.+.++.+++++.+.  .+..+|+.+.+..+++|||+..+||.+++...+..
T Consensus       218 dge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~  296 (633)
T PLN02738        218 DGEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDT  296 (633)
T ss_pred             CcHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccch
Confidence            899999999984 688999999999999999999999999753  46689999999999999999999999886432211


Q ss_pred             hhhHHHHHHHHHHHHHhhcccccccccccchh--hhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCCC---CCccccC
Q 009976          204 QKSKYLASVFIEVEELLTGFYYGDFFSEWVWP--GWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLG---TGAFLLH  278 (521)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  278 (521)
                      ...+.+...+......    ... .++.|..+  ..++...++..+..+.+.+.++++++.+++..+...   .......
T Consensus       297 ~~~~~~~~~~~~~~~~----~~~-~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~  371 (633)
T PLN02738        297 GIVEAVYTVLREAEDR----SVS-PIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNE  371 (633)
T ss_pred             HHHHHHHHHHHHHHHH----hhc-chhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccccc
Confidence            1111111221111110    001 11111111  011111122233344444555555543322111000   0000001


Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccCCCCCcc
Q 009976          279 GNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVE  358 (521)
Q Consensus       279 ~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~~~~~~  358 (521)
                      ...|+++.+++..      ..++++++.+++.++++||+||||++|+|++|+|++||++|+|||+||++++++   ..++
T Consensus       372 ~~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~---~~~t  442 (633)
T PLN02738        372 RDPSILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD---RFPT  442 (633)
T ss_pred             ccchHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC---CCCC
Confidence            2357888887532      248899999999999999999999999999999999999999999999999863   4578


Q ss_pred             hhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCccccccccc
Q 009976          359 ENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQEEDIK  438 (521)
Q Consensus       359 ~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRwl~~~~~~  438 (521)
                      ++++++||||+|||+|+|||||+.+.++|.+.+|++++||.|||||.|.++.|.+||||++|+||++|+||||+..++..
T Consensus       443 ~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~  522 (633)
T PLN02738        443 IEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNP  522 (633)
T ss_pred             HHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCc
Confidence            99999999999999999999995555678899999999999999999999999999999999999999999997422111


Q ss_pred             cccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCeEEEecCCCCCC
Q 009976          439 DFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPLVLVPTGNKGYD  518 (521)
Q Consensus       439 ~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  518 (521)
                      +....++.|+|||.|+|+|+|++||++|++++||+|+++|+|++.++..  ++  ....+.+..++.++.+++++|....
T Consensus       523 ~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~~--~~~~~~~~~p~~~l~v~l~~R~~~~  598 (633)
T PLN02738        523 NETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--PV--KMTTGATIHTTEGLKMTVTRRTKPP  598 (633)
T ss_pred             cccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--Cc--ccccceEEeeCCCcEEEEEECCCCC
Confidence            1122456899999999999999999999999999999999999876532  22  2234556777888899998886544


No 24 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4.8e-68  Score=551.15  Aligned_cols=432  Identities=32%  Similarity=0.534  Sum_probs=330.3

Q ss_pred             CCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccccccc--c
Q 009976           37 PSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKY--V  114 (521)
Q Consensus        37 ~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~--~  114 (521)
                      ||||+++|++||++++.+.+..+..+.++++|||+||++++++.++|+|+||+++++++.++...+..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            68899999999999997435677889999999999999999999999999999999999887655654422211111  1


Q ss_pred             ccCCCceeeCCCChhHHHHHHHhhhccCCHH-HHhhhHHHHHHHHHHHHHHHHhhcCc--ccchHHHHHHHHHHHhhHHh
Q 009976          115 SVGPADVTFSPNGPYWRQARKICVTELLSPK-RVNSFKVVLDEEVNRFMSRVKARCGL--ETDMSDLIFAFCTDFFCLAA  191 (521)
Q Consensus       115 ~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~--~~d~~~~~~~~~~~vi~~~~  191 (521)
                      ...+ ..++..+|+.|+.+|+++. +.|+.. .+ .+.+.+++.++.+++.|....+.  .+|+.+.+..+++|+++.++
T Consensus        81 ~~~~-~~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGG-KGLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTT-TSSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             cccc-ccccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            1222 3344567899999999965 556666 66 89999999999999999876554  49999999999999999999


Q ss_pred             cccccccCcchhhhhHHHHHHHHHHHHHhhcc--cccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCC
Q 009976          192 FGVRFMEDEDEGQKSKYLASVFIEVEELLTGF--YYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQP  269 (521)
Q Consensus       192 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (521)
                      ||.+++...+. ...+ +.+.+..+...+...  .....+|.+.+.  .....+...+..+.+.++++++++++++..+.
T Consensus       158 fG~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  158 FGKDFGSLDDE-DFEE-FLEAFDELFELLSNFFWNLPFFFPWLKYL--PTPLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             HSSHHHGTTHH-HHHH-HHHHHHHHHHHHHSHHHHHHHHHHHHCTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             ccceeeecccc-cccc-ccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccc
Confidence            99987632221 1112 444444443332111  111222211111  11122233344456667777777666554332


Q ss_pred             CCCCccccCCCchHHHHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 009976          270 LGTGAFLLHGNEDFIDVLRRVQ-KSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSV  348 (521)
Q Consensus       270 ~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~  348 (521)
                      .      .....|+++.++... +.++ +..++++++..++.++++||+|||+++++|++|+|++||++|+|||+||+++
T Consensus       234 ~------~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~  306 (463)
T PF00067_consen  234 G------DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSV  306 (463)
T ss_dssp             S------SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             c------cccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            1      023578999888775 2222 1368999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCcchhhcccchhHHHHHHHhhcCCCCCC-CCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCCCC
Q 009976          349 VTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNL-LIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFI  427 (521)
Q Consensus       349 ~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~-~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~  427 (521)
                      .++  ...++.+++++||||+|||+||||++|+.+ .++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+
T Consensus       307 ~~~--~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~  384 (463)
T PF00067_consen  307 LGD--GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFD  384 (463)
T ss_dssp             TTT--SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--
T ss_pred             ccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            844  347899999999999999999999999554 78899999999999999999999999999999999999999999


Q ss_pred             CCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCC
Q 009976          428 PERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGV  486 (521)
Q Consensus       428 PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~  486 (521)
                      ||||++.+.  ....+...|+|||.|+|+|+|++||++|++++|++||++||++++++.
T Consensus       385 P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~  441 (463)
T PF00067_consen  385 PERFLDERG--ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGS  441 (463)
T ss_dssp             TTGGBTTTS--TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTS
T ss_pred             ccccccccc--ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCC
Confidence            999975432  112356789999999999999999999999999999999999997653


No 25 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=9.6e-66  Score=538.55  Aligned_cols=445  Identities=19%  Similarity=0.323  Sum_probs=335.2

Q ss_pred             CCCCCCCCCCCCCCCeeeccccccc---CCCchHHHHHHHHHhCC--eEEEecCCccEEEEeCHHHHHHHHHhCCccccC
Q 009976           30 LPNSPSLPSPPNKLPIIGHLHLFYK---ERKPHKSFAKLAEKLGP--IFYIQLGRVPAVVVSSKELAKQVLKTHDQVFAS  104 (521)
Q Consensus        30 ~~~~~~~~~~p~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyg~--i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~  104 (521)
                      ..+..++||||+++|++|+++++..   ....+..+.++++|||+  +|++++++.++|+++||+.+++++++++ .|.+
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-cccc
Confidence            3455578999999999999988752   34567789999999997  7999999999999999999999998653 3443


Q ss_pred             CCccccccccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhhcCcccchHHHHHHHHH
Q 009976          105 RPSILSAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCT  184 (521)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~  184 (521)
                      +.......  .+| ...+...+|+.|+++|+++.+.+.+++.++.+.+.+++.++.+++.+.+.  ..+|+.+.+..+++
T Consensus       116 ~~~~~~~~--~~g-~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~--~~v~~~~~~~~~~~  190 (490)
T PLN02302        116 GWPESTVE--LIG-RKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSKM--GEIEFLTELRKLTF  190 (490)
T ss_pred             CCchhHHH--Hhc-cccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCC--CCEehHHHHHHHHH
Confidence            32111111  123 23334468999999999965444467889999999999999999988642  35899999999999


Q ss_pred             HHhhHHhcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhh
Q 009976          185 DFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTS  264 (521)
Q Consensus       185 ~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (521)
                      ++++.++||.+.+..  .   .+ +...+..+...+...  ...+|     .   ....+..+..+.+.+++.+.+++++
T Consensus       191 ~vi~~~~~G~~~~~~--~---~~-~~~~~~~~~~~~~~~--~~~~p-----~---~~~~~~~~~~~~l~~~~~~~i~~~~  254 (490)
T PLN02302        191 KIIMYIFLSSESELV--M---EA-LEREYTTLNYGVRAM--AINLP-----G---FAYHRALKARKKLVALFQSIVDERR  254 (490)
T ss_pred             HHHHHHHcCCCChHH--H---HH-HHHHHHHHHHHhhhC--CcCCC-----c---hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999875321  0   11 222221111111100  00011     0   0112333455667777777777665


Q ss_pred             hccCCCCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHH
Q 009976          265 KRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEE  344 (521)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~E  344 (521)
                      +..... ..    ....|+++.+++..+++  +..++++++.+++.++++||+|||+++++|++|+|++||++|+|+|+|
T Consensus       255 ~~~~~~-~~----~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E  327 (490)
T PLN02302        255 NSRKQN-IS----PRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAE  327 (490)
T ss_pred             Hhhhcc-CC----CCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            432210 00    13468999988764332  235899999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCC--CCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCC
Q 009976          345 VRSVVTASG--SGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTN  422 (521)
Q Consensus       345 i~~~~~~~~--~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~d  422 (521)
                      ++++.+..+  ...++++++++|||++|||+|+||++|+.+..+|.+.+|++++||.|||||.|.++.+++||||++|+|
T Consensus       328 ~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~d  407 (490)
T PLN02302        328 QEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPN  407 (490)
T ss_pred             HHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCC
Confidence            999986421  123789999999999999999999999655567999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccc
Q 009976          423 PHDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAAR  502 (521)
Q Consensus       423 P~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  502 (521)
                      |++|+||||++..      ..+..++|||+|+|+|+|++||.+|+++++++|+++|+|++.++.    .++.  ...++.
T Consensus       408 P~~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~  475 (490)
T PLN02302        408 PKEFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG----CKVM--YLPHPR  475 (490)
T ss_pred             ccccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC----Ccce--eCCCCC
Confidence            9999999996321      235689999999999999999999999999999999999987532    1222  223367


Q ss_pred             cCcCeEEEecCCC
Q 009976          503 KRVPLVLVPTGNK  515 (521)
Q Consensus       503 ~~~~l~~~~~~~~  515 (521)
                      |+.++.+++++|.
T Consensus       476 p~~~~~~~~~~~~  488 (490)
T PLN02302        476 PKDNCLARITKVA  488 (490)
T ss_pred             CCCCceEEEEecc
Confidence            8888888888775


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.4e-65  Score=530.28  Aligned_cols=439  Identities=20%  Similarity=0.272  Sum_probs=329.2

Q ss_pred             CCCCCCCCCCCCeeeccccccc---CCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccc
Q 009976           33 SPSLPSPPNKLPIIGHLHLFYK---ERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSIL  109 (521)
Q Consensus        33 ~~~~~~~p~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~  109 (521)
                      ++++||||.++|++||++++..   ...++..+.+++++||+||++++|+.+.|+++||+++++++.++...|..++...
T Consensus         5 ~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~~   84 (452)
T PLN03141          5 KSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPKS   84 (452)
T ss_pred             CCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCchh
Confidence            3457889999999999988742   2356778899999999999999999999999999999999987776665442211


Q ss_pred             cccccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhh-hHHHHHHHHHHHHHHHHhhcCcccchHHHHHHHHHHHhh
Q 009976          110 SAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNS-FKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFC  188 (521)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~vi~  188 (521)
                       .. ...|. ..++..+|+.|+++|+++ ++.|+...+.. ..+.+.+.++.+++.+.  .+..+++.+.+..+++++++
T Consensus        85 -~~-~l~g~-~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~vi~  158 (452)
T PLN03141         85 -LT-ELMGK-SSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR--DDPPVLVQDETKKIAFEVLV  158 (452)
T ss_pred             -HH-HHhCc-ccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc--CCCCEEhHHHHHHHHHHHHH
Confidence             11 12232 334556899999999985 46677666654 35556666666665553  24578999999999999999


Q ss_pred             HHhcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccC
Q 009976          189 LAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQ  268 (521)
Q Consensus       189 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (521)
                      .++||.+.+..    . .+ +...+..+...+..      ++.+ ++.+  . ..+..+..+++.+.++.++++++....
T Consensus       159 ~~~~G~~~~~~----~-~~-~~~~~~~~~~~~~~------~~~~-~p~~--~-~~~~~~~~~~l~~~~~~~i~~~~~~~~  222 (452)
T PLN03141        159 KALISLEPGEE----M-EF-LKKEFQEFIKGLMS------LPIK-LPGT--R-LYRSLQAKKRMVKLVKKIIEEKRRAMK  222 (452)
T ss_pred             HHHcCCCchHH----H-HH-HHHHHHHHhhhHHh------CccC-CCch--H-hHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999865321    1 11 22222222211111      1111 1110  1 123344566777788888776654322


Q ss_pred             CCCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 009976          269 PLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSV  348 (521)
Q Consensus       269 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~  348 (521)
                      ..+..  ......|+++.+++..     +..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       223 ~~~~~--~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~  295 (452)
T PLN03141        223 NKEED--ETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKL  295 (452)
T ss_pred             ccCcc--ccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence            10000  0011357888887643     1358999999999999999999999999999999999999999999999988


Q ss_pred             hcc--CCCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCCC
Q 009976          349 VTA--SGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDF  426 (521)
Q Consensus       349 ~~~--~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F  426 (521)
                      .+.  ..+..++.+++.+|||++|||+|+||+||+.+.++|.+.+|++++||.||||+.|.++.+++||||++|+||++|
T Consensus       296 ~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F  375 (452)
T PLN03141        296 KRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQF  375 (452)
T ss_pred             HhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCcccc
Confidence            642  113357899999999999999999999996557789999999999999999999999999999999999999999


Q ss_pred             CCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcC
Q 009976          427 IPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVP  506 (521)
Q Consensus       427 ~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (521)
                      +||||++.+      ..++.|+|||+|+|+|+|++||++|+++++|+|+++|+|+++++.   ..     ...++.|+.+
T Consensus       376 ~PeRfl~~~------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~~-----~~~~~~~~~~  441 (452)
T PLN03141        376 NPWRWQEKD------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---IV-----NFPTVRMKRK  441 (452)
T ss_pred             CcccccCCC------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---ee-----ecccccCCCC
Confidence            999996421      135689999999999999999999999999999999999886542   11     2257788899


Q ss_pred             eEEEecCC
Q 009976          507 LVLVPTGN  514 (521)
Q Consensus       507 l~~~~~~~  514 (521)
                      +.+++++|
T Consensus       442 ~~~~~~~~  449 (452)
T PLN03141        442 LPIWVTRI  449 (452)
T ss_pred             ceEEEEeC
Confidence            99999998


No 27 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=4e-65  Score=531.08  Aligned_cols=460  Identities=21%  Similarity=0.320  Sum_probs=335.7

Q ss_pred             CCCCCCCCCeeecccccc---cCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCcccccc
Q 009976           36 LPSPPNKLPIIGHLHLFY---KERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAK  112 (521)
Q Consensus        36 ~~~~p~~~p~~G~~~~~~---~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~  112 (521)
                      +..|-.++|++|.-.++.   ..+.++..+.+++++||++|++++|+.++|+++||+++++|+++....|.+++... ..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~-~~   91 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAE-VS   91 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhh-hh
Confidence            456778999999977664   34567888999999999999999999999999999999999987655565543211 11


Q ss_pred             ccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhH-HHHHHHHHHHHHHHHhh--cCcccchHHHHHHHHHHHhhH
Q 009976          113 YVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFK-VVLDEEVNRFMSRVKAR--CGLETDMSDLIFAFCTDFFCL  189 (521)
Q Consensus       113 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~vi~~  189 (521)
                      .... + ..++..+|+.|+++||++ ++.|+.+.+..+. +++.+.++.+++.+.+.  .+.++|+.+.+..+++|+++.
T Consensus        92 ~~~~-~-~~i~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         92 EFLF-G-SGFAIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             HHHh-c-CccccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence            1112 2 334457899999999985 6788888888764 47788899999999754  356799999999999999999


Q ss_pred             HhcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchh--hhccCcchhHHhHHHHHHHHHHHHHHhhhhcc
Q 009976          190 AAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWP--GWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRK  267 (521)
Q Consensus       190 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (521)
                      ++||.+++.....   .+ +...+......... .....+|.+.++  .++.+...+..+..+.+.+.+.++++++++..
T Consensus       169 ~~fG~~~~~~~~~---~~-~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~  243 (489)
T PLN02936        169 SVFNYNFDSLTTD---SP-VIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIV  243 (489)
T ss_pred             HHcCCCccccccC---cH-HHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998642221   12 22211111111110 111122222111  00111122344455566666666666544321


Q ss_pred             CCC----CCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHH
Q 009976          268 QPL----GTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQE  343 (521)
Q Consensus       268 ~~~----~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~  343 (521)
                      +..    ...........|+++.+++..+      .++++++.++++++++||+||||++++|++|+|++||++|+|+|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~  317 (489)
T PLN02936        244 EAEGEVIEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQE  317 (489)
T ss_pred             hhcccccccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            110    0000000123567887775321      378999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCcchhhcccchhHHHHHHHhhcCCC-CCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCC
Q 009976          344 EVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHP-VNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTN  422 (521)
Q Consensus       344 Ei~~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p-~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~d  422 (521)
                      ||+++++.   ..++++++++||||+|||+||||++| ++...+|.+.+|++++||.|||||.|.++.+++||||++|+|
T Consensus       318 Ei~~~~~~---~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~d  394 (489)
T PLN02936        318 ELDRVLQG---RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWER  394 (489)
T ss_pred             HHHHHhcC---CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCC
Confidence            99999864   34789999999999999999999998 566667777788888999999999999999999999999999


Q ss_pred             CCCCCCCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccc
Q 009976          423 PHDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAAR  502 (521)
Q Consensus       423 P~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  502 (521)
                      |++|+||||+..++.......+..|+|||.|+|+|+|++||++|++++|++|+++|+++++++.   ++.  ...+++..
T Consensus       395 P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~~--~~~~~~~~  469 (489)
T PLN02936        395 AEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DIV--MTTGATIH  469 (489)
T ss_pred             ccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---ccc--eecceEEe
Confidence            9999999997432211112234589999999999999999999999999999999999987542   222  22345566


Q ss_pred             cCcCeEEEecCCCCCC
Q 009976          503 KRVPLVLVPTGNKGYD  518 (521)
Q Consensus       503 ~~~~l~~~~~~~~~~~  518 (521)
                      ++.++.+++++|---|
T Consensus       470 ~~~~~~v~~~~R~~~~  485 (489)
T PLN02936        470 TTNGLYMTVSRRRVPD  485 (489)
T ss_pred             eCCCeEEEEEeeeCCC
Confidence            7778888888876555


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=3.6e-64  Score=519.53  Aligned_cols=436  Identities=17%  Similarity=0.278  Sum_probs=323.9

Q ss_pred             CCCCCCCCCCCCeeeccccccc---CCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccc
Q 009976           33 SPSLPSPPNKLPIIGHLHLFYK---ERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSIL  109 (521)
Q Consensus        33 ~~~~~~~p~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~  109 (521)
                      ..++||||.++|++||++++..   ..+++..+.+++++||++|++++++.+.|+|+||+++++++.++...|.+++...
T Consensus        28 ~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~  107 (472)
T PLN02987         28 RMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGS  107 (472)
T ss_pred             CCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHH
Confidence            3357889999999999988742   1346777899999999999999999999999999999999988766665443211


Q ss_pred             cccccccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHH-HHHHHHHHHHHHHHhhcCcccchHHHHHHHHHHHhh
Q 009976          110 SAKYVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKV-VLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFC  188 (521)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~vi~  188 (521)
                      ..  ...|+. .++..+|+.|+++|+++ +++++.+.+..+.. .+.+.+...++.|    ..++++.+.+..+++++++
T Consensus       108 ~~--~~lg~~-~l~~~~g~~wr~~R~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t~~vi~  179 (472)
T PLN02987        108 IS--NLLGKH-SLLLMKGNLHKKMHSLT-MSFANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAKKITFELTV  179 (472)
T ss_pred             HH--HHhCcc-cccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHHHHHHHHHH
Confidence            11  122333 34456899999999985 45555555544321 1223333334433    2368899999999999999


Q ss_pred             HHhcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccC
Q 009976          189 LAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQ  268 (521)
Q Consensus       189 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (521)
                      ..+||.+.+...     .+ +...+......+    ....+|.+      .....+..+..+++.+++.+.++++++...
T Consensus       180 ~~~fg~~~~~~~-----~~-~~~~~~~~~~~~----~~~~~p~l------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  243 (472)
T PLN02987        180 KQLMSFDPGEWT-----ES-LRKEYVLVIEGF----FSVPLPLF------STTYRRAIQARTKVAEALTLVVMKRRKEEE  243 (472)
T ss_pred             HHHcCCCChHHH-----HH-HHHHHHHHHhhh----hcCCCcCC------CchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            999998653211     11 212222111111    11112211      112244556667778888888877654322


Q ss_pred             CCCCCccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 009976          269 PLGTGAFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSV  348 (521)
Q Consensus       269 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~  348 (521)
                      .  ..    ...+|+++.+++..  +    .++++|+.+++.++++||+|||+++++|++|+|++||++|+++++|++++
T Consensus       244 ~--~~----~~~~d~l~~ll~~~--~----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~  311 (472)
T PLN02987        244 E--GA----EKKKDMLAALLASD--D----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKI  311 (472)
T ss_pred             c--cC----cccccHHHHHHhcC--C----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence            1  00    12468888888642  1    48999999999999999999999999999999999999999999999998


Q ss_pred             hccC-CCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCCCC
Q 009976          349 VTAS-GSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFI  427 (521)
Q Consensus       349 ~~~~-~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~  427 (521)
                      .+.. +...++++++.+|||++||++|+||++|+...++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+
T Consensus       312 ~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~  391 (472)
T PLN02987        312 RAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFN  391 (472)
T ss_pred             HcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccC
Confidence            7532 124578899999999999999999999955567899999999999999999999999999999999999999999


Q ss_pred             CCccccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCe
Q 009976          428 PERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPL  507 (521)
Q Consensus       428 PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  507 (521)
                      ||||++.++.   ....+.++|||+|+|.|+|++||++|++++++.|+++|+|+++++.   +  .  .+..++.|.+++
T Consensus       392 PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~--~--~~~~~~~p~~~~  461 (472)
T PLN02987        392 PWRWQSNSGT---TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD---K--L--VFFPTTRTQKRY  461 (472)
T ss_pred             cccCCCCCCC---CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC---c--e--eecccccCCCCc
Confidence            9999643221   1234579999999999999999999999999999999999987542   1  1  223478888889


Q ss_pred             EEEecCC
Q 009976          508 VLVPTGN  514 (521)
Q Consensus       508 ~~~~~~~  514 (521)
                      .+++++|
T Consensus       462 ~~~~~~r  468 (472)
T PLN02987        462 PINVKRR  468 (472)
T ss_pred             eEEEEec
Confidence            9999887


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=2.3e-63  Score=517.37  Aligned_cols=441  Identities=19%  Similarity=0.243  Sum_probs=318.5

Q ss_pred             CCeeecccccccCCCchHHHHHHHHHhC-CeEEEecCCccEEEEeCHHHHHHHHHhCCccccCCCccccccccccCCCce
Q 009976           43 LPIIGHLHLFYKERKPHKSFAKLAEKLG-PIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKYVSVGPADV  121 (521)
Q Consensus        43 ~p~~G~~~~~~~~~~~~~~~~~~~~kyg-~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (521)
                      .++.|+..... . +....+..+.++++ .+++++.++.  |+++||+.+++++.++...|.+............ +. .
T Consensus        49 ~~~~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~-g~-g  122 (502)
T PLN02426         49 AYLTASWAKDF-D-NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLL-GR-G  122 (502)
T ss_pred             CCccHHHHHhc-c-cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhc-CC-c
Confidence            45778866543 1 34556666777776 5777766553  8999999999999876545543321111110112 23 4


Q ss_pred             eeCCCChhHHHHHHHhhhccCCHHHHhhh--HHHHHHHHHHHHHHHHhhc----CcccchHHHHHHHHHHHhhHHhcccc
Q 009976          122 TFSPNGPYWRQARKICVTELLSPKRVNSF--KVVLDEEVNRFMSRVKARC----GLETDMSDLIFAFCTDFFCLAAFGVR  195 (521)
Q Consensus       122 ~~~~~~~~w~~~R~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~~----~~~~d~~~~~~~~~~~vi~~~~fg~~  195 (521)
                      +++.+|+.|+++||++ ++.|+.+.++.+  .+++++.++.+++.+.+..    +.++|+.+++..+++|+|+.++||.+
T Consensus       123 i~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  201 (502)
T PLN02426        123 IFNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD  201 (502)
T ss_pred             eeecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence            5677899999999985 688898888875  3677777788888776432    35699999999999999999999998


Q ss_pred             cccCcchhhhhHHHHHHHHHHHHHhhcccccccccc-cchhhhc-cCcchhHHhHHHHHHHHHHHHHHhhhhccCCCCCC
Q 009976          196 FMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSE-WVWPGWL-TGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTG  273 (521)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (521)
                      ++..+......+ +...+..+......... ...+. +.+..++ .+..++..+..+.+.+.+.++++++++...     
T Consensus       202 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~-----  274 (502)
T PLN02426        202 PGCLELSLPISE-FADAFDTASKLSAERAM-AASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF-----  274 (502)
T ss_pred             CcccCCCCCccH-HHHHHHHHHHHHHHHHh-cchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence            764321111112 33333332221111000 01111 1111111 122234455666777777777766543211     


Q ss_pred             ccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccCC
Q 009976          274 AFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASG  353 (521)
Q Consensus       274 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~  353 (521)
                          ....|+++.+++..        .+++++.+++.++++||+|||+++++|++|+|++||++|+|||+||+++.+.+ 
T Consensus       275 ----~~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~-  341 (502)
T PLN02426        275 ----SASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPN-  341 (502)
T ss_pred             ----CCcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC-
Confidence                12468888887642        25789999999999999999999999999999999999999999999987642 


Q ss_pred             CCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccc-cCeeeCCCCEEEecchhhccCCCCC-CCCCCCCCCcc
Q 009976          354 SGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTL-EGYEIPAKTRIFVNNHAIGRDPKLF-TNPHDFIPERF  431 (521)
Q Consensus       354 ~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l-~g~~IpkGt~v~~~~~~~~~d~~~~-~dP~~F~PeRw  431 (521)
                      ...++++++++||||+|||+||||++|+.+...|.+.+|.++ +|+.|||||.|.++.|++||||++| +||++|+||||
T Consensus       342 ~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRw  421 (502)
T PLN02426        342 QEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERW  421 (502)
T ss_pred             CCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCcccc
Confidence            335799999999999999999999999555557888888776 9999999999999999999999999 99999999999


Q ss_pred             ccccccccccCCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCeEEEe
Q 009976          432 QQEEDIKDFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPLVLVP  511 (521)
Q Consensus       432 l~~~~~~~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  511 (521)
                      ++.+.  .....++.|+|||+|+|+|+|++||++|++++++.|+++|+++++++..+ .  .....+++++++.++.+++
T Consensus       422 l~~~~--~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~-~--~~~~~~~~~~~~~gl~v~~  496 (502)
T PLN02426        422 LKNGV--FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNR-A--PRFAPGLTATVRGGLPVRV  496 (502)
T ss_pred             CCCCC--cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCC-C--CcccceeEEecCCCEEEEE
Confidence            65221  11224567999999999999999999999999999999999998643211 1  1233457788999999999


Q ss_pred             cCCC
Q 009976          512 TGNK  515 (521)
Q Consensus       512 ~~~~  515 (521)
                      ++|.
T Consensus       497 ~~r~  500 (502)
T PLN02426        497 RERV  500 (502)
T ss_pred             EEcc
Confidence            9884


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.3e-58  Score=440.33  Aligned_cols=443  Identities=21%  Similarity=0.336  Sum_probs=315.9

Q ss_pred             CCCCCCCCeeecccccccCCCchHHHHHHHHHhCCeEEEecCCccEEEEeCHHHHHHHHHhCCcc--ccCCCcccccccc
Q 009976           37 PSPPNKLPIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQV--FASRPSILSAKYV  114 (521)
Q Consensus        37 ~~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyg~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~--~~~~~~~~~~~~~  114 (521)
                      |-.-.++|++|+..+|  +.++...+++.++|||+||++.++|+.+-++.+|+....++.++...  +..-....  ...
T Consensus        34 Pli~gwiP~lG~a~~f--gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l--~~~  109 (486)
T KOG0684|consen   34 PLIKGWIPWLGSALAF--GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKL--TTP  109 (486)
T ss_pred             cccccCcchhhHHHHh--ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHh--hhh
Confidence            3344578999999999  67899999999999999999999999999999999999999876322  22111000  111


Q ss_pred             ccCCCceeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHH-HHhhcCcccchHHHHHHHHHHHhhHHhcc
Q 009976          115 SVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSR-VKARCGLETDMSDLIFAFCTDFFCLAAFG  193 (521)
Q Consensus       115 ~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~d~~~~~~~~~~~vi~~~~fg  193 (521)
                      .+| .+++....+....++.+++ ...+....++++.+.|.++...+++. +.+ ++..-.+.+.-....+.+.-...||
T Consensus       110 vFg-~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~  186 (486)
T KOG0684|consen  110 VFG-KGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGG  186 (486)
T ss_pred             hcC-CCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhh
Confidence            222 3344444566667777764 56788899999999998888888877 333 3332223332222222222222233


Q ss_pred             cccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCCCCC
Q 009976          194 VRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTG  273 (521)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (521)
                      ...... +    ++ ....+++....+..  +...+|.+.  + + ...++..++.+.+.+.+...+.++++..+     
T Consensus       187 e~r~~~-d----~~-~a~l~~dLd~~F~~--~d~~FP~~L--P-~-~~~r~~~ra~~~i~k~f~~~i~~rr~s~s-----  249 (486)
T KOG0684|consen  187 EVRDQL-D----AD-VAKLYHDLDQGFQP--FDFLFPYNL--P-I-PLLRRRDRARKKISKIFSKIILDRRASIS-----  249 (486)
T ss_pred             hhhhhh-c----ch-HHHHHHHHhccccc--hHhhcccCC--C-c-chhhhHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence            322110 1    01 22333333222111  112223111  1 1 11233345555565555555555444321     


Q ss_pred             ccccCCCchHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccCC
Q 009976          274 AFLLHGNEDFIDVLRRVQKSDDLDVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASG  353 (521)
Q Consensus       274 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~  353 (521)
                          ....|+++.+++..+ +  +...+++|+.+..+.+++||+.||+.|..|++++|++|||+|+++++|+.+++++++
T Consensus       250 ----~~~~dmlq~l~~~y~-d--g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~  322 (486)
T KOG0684|consen  250 ----KWDNDMLQSLMEKYK-D--GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKK  322 (486)
T ss_pred             ----cccHHHHHHHHHHhh-c--CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccC
Confidence                123577777776222 2  235899999999999999999999999999999999999999999999999997643


Q ss_pred             CCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCccccC----eeeCCCCEEEecchhhccCCCCCCCCCCCCCC
Q 009976          354 SGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEG----YEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPE  429 (521)
Q Consensus       354 ~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g----~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~Pe  429 (521)
                       ..++++.+++||.|+.||+|||||+|+...+.|.+.+|.++.+    |.||+|..|.+++..+||||++|+||+.|+|+
T Consensus       323 -~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~d  401 (486)
T KOG0684|consen  323 -EKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPD  401 (486)
T ss_pred             -CCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChh
Confidence             3489999999999999999999999966666799999988855    99999999999999999999999999999999


Q ss_pred             cccccccccccc--CCCcccccccCCCCCCCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCe
Q 009976          430 RFQQEEDIKDFK--DKDFRFMPFGGGRRGCPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPL  507 (521)
Q Consensus       430 Rwl~~~~~~~~~--~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  507 (521)
                      ||+++++..+..  .-++.+||||+|.+.|||+.||.+|++.+++.+|++||+++.+++. .++|+...   ++.|..++
T Consensus       402 Rf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~-P~~d~s~~---v~~P~g~v  477 (486)
T KOG0684|consen  402 RFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPF-PEVDYSRM---VMQPEGDV  477 (486)
T ss_pred             hccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCC-CCCCHHHh---hcCCCCCc
Confidence            998654432112  2356689999999999999999999999999999999999998743 44666444   67899999


Q ss_pred             EEEecCCC
Q 009976          508 VLVPTGNK  515 (521)
Q Consensus       508 ~~~~~~~~  515 (521)
                      +++=+.|+
T Consensus       478 ~irYK~R~  485 (486)
T KOG0684|consen  478 RIRYKRRP  485 (486)
T ss_pred             eEEEeecC
Confidence            99888876


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.1e-54  Score=443.88  Aligned_cols=407  Identities=18%  Similarity=0.254  Sum_probs=286.1

Q ss_pred             CCCCCCCCCCCCeeeccccccc---CCCchHHHHHHHHHhCC-eEEEecCCccE-------EEEeCHHHHHHHHHh----
Q 009976           33 SPSLPSPPNKLPIIGHLHLFYK---ERKPHKSFAKLAEKLGP-IFYIQLGRVPA-------VVVSSKELAKQVLKT----   97 (521)
Q Consensus        33 ~~~~~~~p~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyg~-i~~~~~~~~~~-------v~i~~p~~~~~i~~~----   97 (521)
                      +...|||+.++|++|+..+|.+   ..++..++.+.++|||+ ||++.++|.|+       |+++||+.++.++.+    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            3345889999999999987652   23446789999999998 99999998666       999999999999975    


Q ss_pred             CCccccCCCccccccccccCCCc--eeeCCCChhHHHHHHHhhhccCCHHHHhhhHHHHHHHHHHHHHHHHhh--cCccc
Q 009976           98 HDQVFASRPSILSAKYVSVGPAD--VTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKAR--CGLET  173 (521)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~  173 (521)
                      ++..+.... .....  .+|++.  .+++.+|+.|+++|+++ .++|+ ..++.+.+.|++.++.+++.|.+.  .+..+
T Consensus        95 ~~~~~~~~~-~~~~~--l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         95 KRDVFTGTY-MPSTA--FTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             ccccceeee-ccCcc--ccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence            333333221 11111  334331  45567899999999996 57787 466889999999999999999643  34569


Q ss_pred             chHHHHHHHHHHHhhHHhcccccccCcchhhhhHHHHHHHHHHHHHhhcccccccccccchhhhccCcchhHHhHHHHHH
Q 009976          174 DMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLL  253 (521)
Q Consensus       174 d~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (521)
                      |+.+.+..+++|+++.++||.+.+.    ....+.+......+....       .+|....     .           +.
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~----~~l~~~~~~~~~~~~~~~-------~~p~~~~-----~-----------l~  222 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSE----TALGSDGPALIQKWLALQ-------LAPLAST-----G-----------LP  222 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcch----hhhccchhHHHHHHHHHH-------hhHHHHc-----C-----------ch
Confidence            9999999999999999999996543    111111211111111000       0000000     0           00


Q ss_pred             HHHHHHHHhhhhccCCCCCCccccCCCchH-------HHHHHHhhcCCCCCCCCCHHHHHHHHHH-HHHccccchHHHHH
Q 009976          254 NAVDEIFDKTSKRKQPLGTGAFLLHGNEDF-------IDVLRRVQKSDDLDVPLTDDNLMAIVSD-MFVAGVDPSTATLE  325 (521)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~~AG~dTta~~l~  325 (521)
                      ..+++++.+..........     ...++.       .+.++....+    ..++++|+.++++. +.++|++||+++++
T Consensus       223 ~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~  293 (480)
T PLN02648        223 HVLEELLLHTFPLPFFLVK-----SDYDKLYDFFRASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFP  293 (480)
T ss_pred             HHHHHHhhcccCCchhhhh-----ccHHHHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            0011111000000000000     000111       1223322222    13899999998875 44677777888999


Q ss_pred             HHHHHHhhChH-HHHHHHHHHHHhhccCCCCCcchhhcccchhHHHHHHHhhcCCCCCCCCccccCCCcccc----Ceee
Q 009976          326 WIMTDLARHPR-VMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESMRLHPVNLLIPRESSDKCTLE----GYEI  400 (521)
Q Consensus       326 ~~l~~L~~~P~-~q~~lr~Ei~~~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~----g~~I  400 (521)
                      |++|+|++||+ +|+|||+||+++++. ++..++++++++|||+++||+|+||+||+...+.|.+.+|++++    ||.|
T Consensus       294 ~~l~~L~~~p~~v~~klr~Ei~~~~~~-~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~I  372 (480)
T PLN02648        294 ALLKWVGRAGEELQARLAEEVRSAVKA-GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEI  372 (480)
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHhcc-CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEE
Confidence            99999999995 999999999999853 23458999999999999999999999995555568889999985    7999


Q ss_pred             CCCCEEEecchhhccCCCCCCCCCCCCCCccccccccccccCCCcccccc---------cCCCCCCCChhHHHHHHHHHH
Q 009976          401 PAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQEEDIKDFKDKDFRFMPF---------GGGRRGCPGYGFGSITVQWAV  471 (521)
Q Consensus       401 pkGt~v~~~~~~~~~d~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~lpF---------g~G~R~CiG~~lA~~e~~~~l  471 (521)
                      |||+.|.++.+.+||||++|+||++|||+||++.++.     ....+++|         |+|+|.|+|++||++|+++++
T Consensus       373 pkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-----~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~l  447 (480)
T PLN02648        373 KKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-----KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFV  447 (480)
T ss_pred             CCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc-----ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHH
Confidence            9999999999999999999999999999999643211     11233443         678899999999999999999


Q ss_pred             HHHHhhcc-eecCCCC
Q 009976          472 AGLLYHFD-WALPRGV  486 (521)
Q Consensus       472 a~ll~~f~-~~~~~~~  486 (521)
                      ++|+++|+ |++.+++
T Consensus       448 a~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        448 AELFLRYDSFEIEVDT  463 (480)
T ss_pred             HHHHHHhCEEeecCCc
Confidence            99999998 9987664


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=4.8e-50  Score=406.68  Aligned_cols=378  Identities=22%  Similarity=0.346  Sum_probs=284.5

Q ss_pred             HHHHHHHhCCeEEEecCCc--cEEEEeCHHHHHHHHHhCCccccCCC--ccccc-cccccCCCceeeCCCChhHHHHHHH
Q 009976           62 FAKLAEKLGPIFYIQLGRV--PAVVVSSKELAKQVLKTHDQVFASRP--SILSA-KYVSVGPADVTFSPNGPYWRQARKI  136 (521)
Q Consensus        62 ~~~~~~kyg~i~~~~~~~~--~~v~i~~p~~~~~i~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~w~~~R~~  136 (521)
                      .....+.||.++.....+.  ..+++++++.+++++.+.. .+.+..  ..... ..... +...++..+|+.|.++||+
T Consensus        28 ~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~ll~~dg~~H~r~Rkl  105 (411)
T COG2124          28 LERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVL-GDGSLLTLDGPEHTRLRKL  105 (411)
T ss_pred             HHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhc-cccceeecCCHHHHHHHHH
Confidence            3344566776666655443  3799999999999998764 111111  11110 11122 2232556799999999998


Q ss_pred             hhhccCCHHHHhhhHHHHHHHHHHHHHHHHhhcCcccchHHHHHHHHHHHhhHHhcccccccCcchhhhhHHHHHHHHHH
Q 009976          137 CVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEV  216 (521)
Q Consensus       137 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~  216 (521)
                       +++.|+++.++.+.+.+.+.++.+++.+ ... ...++.+....+++++|+ ..||.+.++.   .....   ..    
T Consensus       106 -~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~---~~~~~---~~----  171 (411)
T COG2124         106 -LAPAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLEDR---PQLLR---WS----  171 (411)
T ss_pred             -hccccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH---HHHHH---HH----
Confidence             5789999999999999999999999998 433 678899999999999999 9999976431   11011   11    


Q ss_pred             HHHhhcccccccccccchhhhccCcchhHHhHHHHHHHHHHHHHHhhhhccCCCCCCccccCCCchHHHHHHHhhcCCCC
Q 009976          217 EELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVQKSDDL  296 (521)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~  296 (521)
                      ...+....     +..    .......+..+....+.+++..++++++.            ...+|+++.++....+++ 
T Consensus       172 ~~~~~~~~-----~~~----~~~~~~~~~~~a~~~~~~~~~~li~~rR~------------~~~~dlls~l~~a~~~~~-  229 (411)
T COG2124         172 DALLLRLD-----PDL----GPEEPWRRARAARRELDAYLRALIAERRA------------APRDDLLSLLLSAEDDGG-  229 (411)
T ss_pred             HHHHhccC-----ccc----CCcccHHHHHHHHHHHHHHHHHHHHHhcc------------CCcccHHHHHHHHhhCCC-
Confidence            00000000     110    00111234556777888888888877651            234678888887765443 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccCCCCCcchhhcccchhHHHHHHHhh
Q 009976          297 DVPLTDDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVTASGSGRVEENHIHQLKYMKAVIKESM  376 (521)
Q Consensus       297 ~~~~~~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~~~~~~~~~~~~lpyl~a~i~Etl  376 (521)
                       ..+|++||.++++++++||||||+++++|++|.|++||++++++++|.+.                  ||++++|+|+|
T Consensus       230 -~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~------------------~~~~~~v~E~L  290 (411)
T COG2124         230 -GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR------------------PLLEAVVEETL  290 (411)
T ss_pred             -CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch------------------HHHHHHHHHHH
Confidence             25999999999999999999999999999999999999999999998652                  99999999999


Q ss_pred             cCCCCCCCCccccCCCccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCccccccccccccCCCcccccccCCCCC
Q 009976          377 RLHPVNLLIPRESSDKCTLEGYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRG  456 (521)
Q Consensus       377 Rl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~  456 (521)
                      |++|+...++|.+.+|++++|+.||||+.|.+++++.||||++|+||++|||+||  .          +.|+|||+|+|.
T Consensus       291 R~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~--~----------~~~l~FG~G~H~  358 (411)
T COG2124         291 RLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERF--N----------NAHLPFGGGPHR  358 (411)
T ss_pred             HhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCC--C----------CCCcCCCCCCcc
Confidence            9999554589999999999999999999999999999999999999999999999  2          478999999999


Q ss_pred             CCChhHHHHHHHHHHHHHHhhcceecCCCCCCCCCCcccccCcccccCcCeEEEecCC
Q 009976          457 CPGYGFGSITVQWAVAGLLYHFDWALPRGVGPSDVDLQEVFGLAARKRVPLVLVPTGN  514 (521)
Q Consensus       457 CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  514 (521)
                      |+|++||++|++++|+.|+++|++....+ . ..    .....+..++.+..+.++.|
T Consensus       359 ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~~----~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         359 CLGAALARLELKVALAELLRRFPLLLLAE-P-PP----LVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             ccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-CC----ccccccccCCCcceeeeecC
Confidence            99999999999999999999999876554 1 11    12334455666666666544


No 33 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=51.58  E-value=4.7  Score=34.84  Aligned_cols=35  Identities=20%  Similarity=0.442  Sum_probs=26.1

Q ss_pred             CCCCCccccccccccccCCCcccccccCCCCCCCChh
Q 009976          425 DFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYG  461 (521)
Q Consensus       425 ~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~  461 (521)
                      +|||++|  .+=..+...+..+.+-|.+|+=.|-|-+
T Consensus        36 eYnP~qF--pGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          36 EYNPEQF--PGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             ccCHhHC--CeeEEEecCCcceEEEEecCcEEEeccC
Confidence            7999999  4322233334568999999999999986


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=47.16  E-value=55  Score=21.89  Aligned_cols=42  Identities=17%  Similarity=0.347  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 009976          304 NLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEV  345 (521)
Q Consensus       304 ~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei  345 (521)
                      +++..+..++=.|.|-.+-.++-.+.+.--||+..+.+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            344555566677888888888888888889999999988886


No 35 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=43.42  E-value=19  Score=29.92  Aligned_cols=21  Identities=19%  Similarity=0.407  Sum_probs=16.1

Q ss_pred             CCCChhHHHHHHHHHHHHHHh
Q 009976          456 GCPGYGFGSITVQWAVAGLLY  476 (521)
Q Consensus       456 ~CiG~~lA~~e~~~~la~ll~  476 (521)
                      +|.|++||..++-.++++|+.
T Consensus        19 N~~gKKFsE~QiN~FIs~lIt   39 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLIT   39 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHHhc
Confidence            799999999999999999986


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=41.72  E-value=26  Score=24.40  Aligned_cols=19  Identities=32%  Similarity=0.483  Sum_probs=16.1

Q ss_pred             HHHHHHhhChHHHHHHHHH
Q 009976          326 WIMTDLARHPRVMKKAQEE  344 (521)
Q Consensus       326 ~~l~~L~~~P~~q~~lr~E  344 (521)
                      =.+.+|.+||++.++|.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            3577999999999999874


No 37 
>CHL00145 psaD photosystem I subunit II; Validated
Probab=31.01  E-value=1.5e+02  Score=24.22  Aligned_cols=72  Identities=25%  Similarity=0.251  Sum_probs=48.5

Q ss_pred             cccccCCCCCCCChh---HHHHHHHHHHHHHHh-hccee-------cC----------CCCCCCCCCccc-----ccCcc
Q 009976          447 FMPFGGGRRGCPGYG---FGSITVQWAVAGLLY-HFDWA-------LP----------RGVGPSDVDLQE-----VFGLA  500 (521)
Q Consensus       447 ~lpFg~G~R~CiG~~---lA~~e~~~~la~ll~-~f~~~-------~~----------~~~~~~~~~~~~-----~~~~~  500 (521)
                      -||=|+-.-+--|.+   ||+-|-.++|..=|+ +|+++       ++          ++.-|+.++...     ...-.
T Consensus        42 EmPTGGAA~M~~G~NLlylARKEQclALgtQLrtkfKI~dyKIYRifP~Ge~~~LhPkDGVfpEKvN~GR~~vg~~~r~I  121 (139)
T CHL00145         42 EMPTGGAAIMRNGENLLYLARKEQCLALGTQLRTKFKINDYKIYRIFPNGEVQYLHPKDGVFPEKVNPGRVAVGSRDFSI  121 (139)
T ss_pred             ecCCchhhhhhcCchhhhhhHHHHHHHHHHHHhhcccccccEEEEECCCCceEEecCCCCCCcccccCcccccCCCcccc
Confidence            367788788888887   799999999999888 47653       12          222234432221     11222


Q ss_pred             cccCcCeEEEecCCCCCC
Q 009976          501 ARKRVPLVLVPTGNKGYD  518 (521)
Q Consensus       501 ~~~~~~l~~~~~~~~~~~  518 (521)
                      .+..+|..++.+.+.+||
T Consensus       122 G~NpnP~~~KFsgk~tyd  139 (139)
T CHL00145        122 GKNPNPASVKFTGKATYD  139 (139)
T ss_pred             cCCCCcceEEecCccCCC
Confidence            456778899999999987


No 38 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=30.59  E-value=22  Score=24.18  Aligned_cols=11  Identities=45%  Similarity=0.981  Sum_probs=8.9

Q ss_pred             ccccCCCCCCC
Q 009976          448 MPFGGGRRGCP  458 (521)
Q Consensus       448 lpFg~G~R~Ci  458 (521)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999998874


No 39 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=28.50  E-value=2.6e+02  Score=21.24  Aligned_cols=49  Identities=16%  Similarity=0.178  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 009976          302 DDNLMAIVSDMFVAGVDPSTATLEWIMTDLARHPRVMKKAQEEVRSVVT  350 (521)
Q Consensus       302 ~~~l~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~  350 (521)
                      ...........++-=+.+++....-.+.+-++||+..+++++++.+-+.
T Consensus        31 ~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   31 SDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            4445555667888999999999999999999999999999999976653


No 40 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=28.46  E-value=96  Score=30.05  Aligned_cols=71  Identities=11%  Similarity=0.208  Sum_probs=46.1

Q ss_pred             hHHHHHHHhhcCCCCC----CCCccccCCCcccc----CeeeCCCCEEEecchhhccCCCCCCCCCCCCCCccccccccc
Q 009976          367 YMKAVIKESMRLHPVN----LLIPRESSDKCTLE----GYEIPAKTRIFVNNHAIGRDPKLFTNPHDFIPERFQQEEDIK  438 (521)
Q Consensus       367 yl~a~i~EtlRl~p~~----~~~~r~~~~~~~l~----g~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRwl~~~~~~  438 (521)
                      +-+-+++.|..+.|++    .++.-.++.|..+-    .-.|..||.|.++                             
T Consensus       274 ~ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-----------------------------  324 (361)
T COG1759         274 MGERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-----------------------------  324 (361)
T ss_pred             HHHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-----------------------------
Confidence            4556888889999743    33444455554331    3456777755443                             


Q ss_pred             cccCCCcccccccCCCCCCCChhHHHHHHHHHHH
Q 009976          439 DFKDKDFRFMPFGGGRRGCPGYGFGSITVQWAVA  472 (521)
Q Consensus       439 ~~~~~~~~~lpFg~G~R~CiG~~lA~~e~~~~la  472 (521)
                         +++++++-||.+  +-+|+++|. |+|.++-
T Consensus       325 ---GspYs~l~~~~p--ms~GrRIA~-EIk~A~e  352 (361)
T COG1759         325 ---GSPYSNLYWGEP--MSTGRRIAR-EIKEAIE  352 (361)
T ss_pred             ---CCcchhhhcCCC--cchhhHHHH-HHHHHHH
Confidence               246677777776  889999998 8887753


No 41 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=28.15  E-value=41  Score=30.37  Aligned_cols=44  Identities=14%  Similarity=0.198  Sum_probs=31.5

Q ss_pred             cchhHHHHHHHhhcCCCCCCCCccccCCCccccCeeeCCCCEEEe
Q 009976          364 QLKYMKAVIKESMRLHPVNLLIPRESSDKCTLEGYEIPAKTRIFV  408 (521)
Q Consensus       364 ~lpyl~a~i~EtlRl~p~~~~~~r~~~~~~~l~g~~IpkGt~v~~  408 (521)
                      .-..+.|||.|+.-+..... +.-...+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~-vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSR-VRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCE-EEEEEcCceEECCEEeCCCCEEEE
Confidence            34567788888877664222 233457889999999999998765


No 42 
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=27.02  E-value=39  Score=29.81  Aligned_cols=56  Identities=16%  Similarity=0.347  Sum_probs=32.3

Q ss_pred             CCCCCCccccccccccccCCCcccccccCCCCCCCCh-hHHHHH-HHHHHHHHHhhccee
Q 009976          424 HDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGY-GFGSIT-VQWAVAGLLYHFDWA  481 (521)
Q Consensus       424 ~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~-~lA~~e-~~~~la~ll~~f~~~  481 (521)
                      -+|+||+|  .+-.-+.....-..+-|+.|+=.|.|- .-.... ..--++.+|++..+.
T Consensus        29 ~eYePe~f--pgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~i~~~L~~~g~~   86 (174)
T cd04516          29 AEYNPKRF--AAVIMRIREPKTTALIFSSGKMVCTGAKSEDDSKLAARKYARIIQKLGFP   86 (174)
T ss_pred             CEECCccC--cEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCCC
Confidence            58999999  432222222344678999999999993 332221 122233556655543


No 43 
>PLN00062 TATA-box-binding protein; Provisional
Probab=26.55  E-value=39  Score=29.91  Aligned_cols=55  Identities=16%  Similarity=0.343  Sum_probs=32.9

Q ss_pred             CCCCCCccccccccccccCCCcccccccCCCCCCCCh-hHHHHH-HHHHHHHHHhhcce
Q 009976          424 HDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGY-GFGSIT-VQWAVAGLLYHFDW  480 (521)
Q Consensus       424 ~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~-~lA~~e-~~~~la~ll~~f~~  480 (521)
                      -+|+||||  .+-.-+...+.-..+-|+.|+=.|-|- .-.... ..--++.+|++..+
T Consensus        29 ~eYePe~f--pgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~~~~~L~~lg~   85 (179)
T PLN00062         29 AEYNPKRF--AAVIMRIREPKTTALIFASGKMVCTGAKSEHDSKLAARKYARIIQKLGF   85 (179)
T ss_pred             CEECCccC--cEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCC
Confidence            58999999  432222222345689999999999995 332222 22233455655544


No 44 
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=26.19  E-value=18  Score=31.97  Aligned_cols=36  Identities=19%  Similarity=0.465  Sum_probs=25.7

Q ss_pred             CCCCCCccccccccccccCCCcccccccCCCCCCCChh
Q 009976          424 HDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGYG  461 (521)
Q Consensus       424 ~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~~  461 (521)
                      -+|+|+||  .+-.-+...+.-..+-|+.|+=.|.|-+
T Consensus        29 ~eY~P~~f--pgli~Rl~~Pk~t~lIF~SGKiv~tGak   64 (174)
T cd04518          29 AEYNPDQF--PGLVYRLEDPKIAALIFRSGKMVCTGAK   64 (174)
T ss_pred             cEECCCcC--cEEEEEccCCcEEEEEECCCeEEEEccC
Confidence            47999999  4332233333456899999999999873


No 45 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=21.28  E-value=50  Score=29.91  Aligned_cols=24  Identities=21%  Similarity=0.364  Sum_probs=19.6

Q ss_pred             Eecchhh-ccCCCCCCCCCCCCCCc
Q 009976          407 FVNNHAI-GRDPKLFTNPHDFIPER  430 (521)
Q Consensus       407 ~~~~~~~-~~d~~~~~dP~~F~PeR  430 (521)
                      .++-|.- |.|+.+|.|...|+|-|
T Consensus       187 GiPGW~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  187 GIPGWWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCCCCCcccccCccccCCCC
Confidence            3445555 88999999999999988


No 46 
>PRK00394 transcription factor; Reviewed
Probab=20.77  E-value=45  Score=29.56  Aligned_cols=35  Identities=23%  Similarity=0.494  Sum_probs=24.8

Q ss_pred             CCCCCCccccccccccccCCCcccccccCCCCCCCCh
Q 009976          424 HDFIPERFQQEEDIKDFKDKDFRFMPFGGGRRGCPGY  460 (521)
Q Consensus       424 ~~F~PeRwl~~~~~~~~~~~~~~~lpFg~G~R~CiG~  460 (521)
                      -+|+||||  .+-.-+...+.-..+-|+.|+=.|.|-
T Consensus        28 ~eYePe~f--pgli~Rl~~Pk~t~lIf~sGKiv~tGa   62 (179)
T PRK00394         28 AEYNPEQF--PGLVYRLEDPKIAALIFRSGKVVCTGA   62 (179)
T ss_pred             ceeCcccC--ceEEEEecCCceEEEEEcCCcEEEEcc
Confidence            48999999  432222223345689999999999994


Done!